Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GABRG3_chr15_26966181_27546984	26980681	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG02717.hp1 HG03516.hp1 HG00408.hp2 HG02717.hp1 HG03516.hp1	a0001 a0001	a0001c0003 a0001c0010 a0001c0003 a0001c0010	a0001c0003t0006 a0001c0003t0012 a0001c0010t0017 a0001c0003t0006 a0001c0003t0012 a0001c0010t0017	a0001c0003t0006g0034 a0001c0003t0012g0023 a0001c0010t0017g0003 a0001c0003t0006g0034 a0001c0003t0012g0023 a0001c0010t0017g0003	3	92	0.0326	-11	c.202 others(28): Show c.202+3545_202+3555delAAAAAAAAAAA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27166206	CTAATATT others(4): Show CTAATATTCAGA	C C	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0067 a0001c0005t0002g0067	1	92	0.0109	-11	c.270 others(32): Show c.270+139397_270+139407delTAATATTCAGA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27346066	AGAGAGAG others(4): Show AGAGAGAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03139.hp2 HG03195.hp1 others(2): Show HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03471.hp2	a0001 a0001	a0001c0002 a0001c0007 a0001c0009 others(2): Show a0001c0002 a0001c0007 a0001c0009 a0001c0014 a0001c0018	a0001c0002t0006 a0001c0007t0036 a0001c0009t0002 others(2): Show a0001c0002t0006 a0001c0007t0036 a0001c0009t0002 a0001c0014t0024 a0001c0018t0004	a0001c0002t0006g0062 a0001c0007t0036g0016 a0001c0009t0002g0089 others(2): Show a0001c0002t0006g0062 a0001c0007t0036g0016 a0001c0009t0002g0089 a0001c0014t0024g0057 a0001c0018t0004g0053	5	92	0.0544	-11	c.574 others(30): Show c.574+17179_574+17189delGAGAGAGAAAG	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9			chr15	TogoVar
GABRG3_chr15_26966181_27546984	27351085	AGTGTGTG others(4): Show AGTGTGTGTATG	A A	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0089 a0001c0009t0002g0089	1	92	0.0109	-11	c.574 others(30): Show c.574+22206_574+22216delATGGTGTGTGT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27388096	AAGGGAGG others(4): Show AAGGGAGGGAGG	A A	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0043	1	92	0.0109	-11	c.574 others(30): Show c.574+59209_574+59219delAGGGAGGGAGG	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9			chr15	TogoVar
GABRG3_chr15_26966181_27546984	27388224	GGAAAGGG others(4): Show GGAAAGGGAGGA	G G	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0010 a0001c0009t0010	a0001c0009t0010g0051 a0001c0009t0010g0051	1	92	0.0109	-11	c.574 others(30): Show c.574+59338_574+59348delAAAGGGAGGAG	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27403904	CAAAAAAA others(4): Show CAAAAAAAAACA	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 NA18906.hp1 HG02145.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0032 a0001c0001t0001 a0001c0003t0032	a0001c0001t0001g0038 a0001c0003t0032g0040 a0001c0001t0001g0038 a0001c0003t0032g0040	2	92	0.0217	-11	c.574 others(30): Show c.574+75026_574+75036delCAAAAAAAAAA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27423721	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0009 a0001c0003t0009	a0001c0003t0009g0059 a0001c0003t0009g0059	1	92	0.0109	-11	c.575 others(30): Show c.575-56912_575-56902delTTTTTTTTTTT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRR2_chr6_89249464_89320299	89308882	GGGGAGGG others(4): Show GGGGAGGGCATA	G G	intron_variant intron_variant	MODIFIER	NA19076.hp2 NA19076.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	366	0.0027	-11	c.113 others(28): Show c.113+6160_113+6170delTATGCCCTCCC	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	1/8			chr6	TogoVar
GADD45G_chr9_89600012_89611555	89600045	TGCAGGGA others(4): Show TGCAGGGACCAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	1	452	0.0022	-11	c.-50 others(22): Show c.-5076_-5066delGCAGGGACCAG	GADD45G	ENSG00000130222.11	transcript	ENST00000252506.11	protein_coding		4966		chr9	TogoVar
GADL1_chr3_30721197_30899661	30816530	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0224 a0001c0001t0008g0224	1	282	0.0036	-11	c.105 others(32): Show c.1051-15453_1051-15443delAAAAAAAAAAA	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	11/14			chr3	TogoVar
GADL1_chr3_30721197_30899661	30889084	TAAAAAAA others(4): Show TAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA18979.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0029	1	282	0.0036	-11	c.37+ others(26): Show c.37+5483_37+5493delTTTTTTTTTTT	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	1/14			chr3	TogoVar
GAGE10_chrX_49298646_49324841	49300477	GTTTTTTT others(4): Show GTTTTTTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19079.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	302	0.0033	-11	c.-32 others(22): Show c.-3284_-3274delTTTTTTTTTTT	GAGE10	ENSG00000215274.6	transcript	ENST00000407599.4	protein_coding		3168		chrX	TogoVar
GAGE12J_chrX_49317037_49334384	49328094	TTTATTTA others(4): Show TTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	a0001 a0002 a0005 others(6): Show a0001 a0002 a0005 a0006 a0007 a0009 a0010 a0011 a0012	a0001c0001 a0002c0002 a0005c0005 others(6): Show a0001c0001 a0002c0002 a0005c0005 a0006c0006 a0007c0007 a0009c0011 a0010c0012 a0011c0013 a0012c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0001 a0005c0005t0002 a0006c0006t0002 a0007c0007t0003 a0009c0011t0002 a0010c0012t0002 a0011c0013t0002 a0012c0014t0002	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	98	194	0.5052	-11	c.332 others(28): Show c.332-1174_332-1164delATTTATTTATT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAGE13_chrX_49326582_49343949	49328094	TTTATTTA others(4): Show TTTATTTATTTA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG01081.hp2 HG01099.hp1 others(55): Show HG00408.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02615.hp2 HG02683.hp2 HG02735.hp1 HG02809.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03654.hp1 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04228.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18952.hp1 NA18969.hp1 NA18969.hp2 NA18977.hp1 NA18989.hp1 NA18995.hp1 NA18998.hp1 NA19000.hp1 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19088.hp1 NA19089.hp1 NA20129.hp2 NA20805.hp1 NA20905.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0006 a0009	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0006c0006 a0009c0009	a0001c0001t0002 a0001c0001t0005 a0002c0002t0007 others(5): Show a0001c0001t0002 a0001c0001t0005 a0002c0002t0007 a0003c0003t0003 a0003c0003t0004 a0005c0005t0004 a0006c0006t0004 a0009c0009t0003	a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0009 others(31): Show a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0009 a0001c0001t0002g0026 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0047 a0001c0001t0005g0006 a0001c0001t0005g0027 a0002c0002t0007g0020 a0003c0003t0003g0003 a0003c0003t0003g0004 a0003c0003t0003g0008 a0003c0003t0003g0039 a0003c0003t0003g0040 a0003c0003t0003g0041 a0003c0003t0003g0042 a0003c0003t0003g0043 a0003c0003t0003g0045 a0003c0003t0003g0048 a0003c0003t0004g0004 a0003c0003t0004g0015 a0003c0003t0004g0033 a0003c0003t0004g0044 a0003c0003t0004g0046 a0005c0005t0004g0050 a0005c0005t0004g0051 a0005c0005t0004g0052 a0006c0006t0004g0010 a0009c0009t0003g0034	58	93	0.6237	-11	c.-36 others(22): Show c.-3603_-3593delTTATTTATTTA	GAGE13	ENSG00000274274.2	transcript	ENST00000612958.2	protein_coding		3487		chrX	TogoVar
GAL3ST2_chr2_241771822_241809287	241779214	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02056.hp2 NA18954.hp2 others(2): Show HG01952.hp1 HG02056.hp2 NA18954.hp2 NA18999.hp1 NA19007.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0002 a0003c0003t0001 a0001c0001t0001 a0002c0002t0002 a0003c0003t0001	a0001c0001t0001g0242 a0002c0002t0002g0085 a0003c0003t0001g0241 others(2): Show a0001c0001t0001g0242 a0002c0002t0002g0085 a0003c0003t0001g0241 a0003c0003t0001g0243 a0003c0003t0001g0249	5	314	0.0159	-11	c.29+ others(26): Show c.29+2257_29+2267delTTTTTTTTTTT	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAL3ST2_chr2_241771822_241809287	241807083	AACCTCCG others(4): Show AACCTCCGCAGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0151 a0002c0002t0002g0151	1	314	0.0032	-11	c.29 others(22): Show c.2918_*2928delACCTCCGCAGG	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding		2797		chr2	TogoVar
GAL3ST2_chr2_241771822_241809287	241807888	TCCCTCCC others(4): Show TCCCTCCCTCCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0108 a0002c0002t0001g0108	1	314	0.0032	-11	c.37 others(22): Show c.3723_*3733delCCCTCCCTCCC	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding		3602		chr2	TogoVar
GALK2_chr15_49165247_49336882	49277137	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19070.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0293 a0001c0001t0001g0293	1	348	0.0029	-11	c.505 others(28): Show c.505-4811_505-4801delTTTTTTTTTTT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALM_chr2_38661114_38739765	38665483	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0201 a0002c0002t0001g0201	1	328	0.0031	-11	c.-67 others(20): Show c.-678_-668delTTTTTTTTTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding		630		chr2	TogoVar
GALM_chr2_38661114_38739765	38677260	TAGAGAAG others(4): Show TAGAGAAGAGCC	T T	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0206 a0001c0001t0006g0206	1	328	0.0031	-11	c.345 others(28): Show c.345+1214_345+1224delGCCAGAGAAGA	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703081	TATATATA others(4): Show TATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0162	1	328	0.0031	-11	c.634 others(30): Show c.634+13188_634+13198delATATATATATA	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6			chr2	TogoVar
GALM_chr2_38661114_38739765	38703084	ATATATAT others(4): Show ATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01099.hp2 HG02523.hp1 HG00609.hp1 HG01099.hp2 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0141 a0001c0001t0011g0156 a0001c0001t0011g0160 a0001c0001t0001g0141 a0001c0001t0011g0156 a0001c0001t0011g0160	3	328	0.0092	-11	c.634 others(30): Show c.634+13192_634+13202delATATATATTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703086	ATATATAT others(4): Show ATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02129.hp1 NA19062.hp2 others(3): Show HG02074.hp2 HG02129.hp1 NA19062.hp2 NA19086.hp2 NA19089.hp1 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0148 a0001c0001t0001g0149 others(3): Show a0001c0001t0001g0011 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0168 a0001c0001t0001g0182 a0001c0001t0001g0192	6	328	0.0183	-11	c.634 others(30): Show c.634+13194_634+13204delATATATTTTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703088	ATATATTT others(4): Show ATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01943.hp2 HG04115.hp1 others(1): Show HG00673.hp2 HG01943.hp2 HG04115.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0001t0001 a0001c0001t0002 a0001c0001t0011	a0001c0001t0001g0150 a0001c0001t0002g0018 a0001c0001t0002g0025 others(1): Show a0001c0001t0001g0150 a0001c0001t0002g0018 a0001c0001t0002g0025 a0001c0001t0011g0020	4	328	0.0122	-11	c.634 others(30): Show c.634+13196_634+13206delATATTTTTTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNS_chr16_88808734_88861947	88812783	TGGCGCCA others(4): Show TGGCGCCATCTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18993.hp2 NA19057.hp2 NA19081.hp2 NA18993.hp2 NA19057.hp2 NA19081.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0032 a0001c0004t0001g0033 a0001c0004t0001g0034 a0001c0004t0001g0032 a0001c0004t0001g0033 a0001c0004t0001g0034	3	404	0.0074	-11	c.16 others(22): Show c.1645_*1655delCAGATGGCGCC	GALNS	ENSG00000141012.13	transcript	ENST00000268695.10	protein_coding		950		chr16	TogoVar
GALNT10_chr5_154185733_154425984	154330907	GGGTGTGT others(4): Show GGGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA18979.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0165 a0001c0001t0002g0165	1	236	0.0042	-11	c.568 others(28): Show c.568+1171_568+1181delGTGTGTGTGTG	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GALNT11_chr7_152020674_152127340	152113712	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	284	0.0035	-11	c.123 others(28): Show c.1233+346_1233+356delTTTTTTTTTTT	GALNT11	ENSG00000178234.13	transcript	ENST00000430044.7	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT13_chr2_153866922_154458979	153903705	GTTTATTA others(4): Show GTTTATTAAAAT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00642.hp1 HG00642.hp2 others(22): Show HG00140.hp1 HG00642.hp1 HG00642.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01256.hp2 HG01258.hp1 HG01261.hp2 HG01358.hp2 HG01516.hp2 HG01978.hp2 HG02080.hp1 HG02523.hp1 HG02698.hp2 HG02735.hp1 HG03688.hp1 HG03834.hp1 HG04199.hp1 NA18612.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0014 a0001c0001t0021 a0001c0001t0025 a0001c0001t0039 a0001c0001t0047 a0001c0001t0065	a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0002g0106 others(22): Show a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0116 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0135 a0001c0001t0002g0139 a0001c0001t0006g0108 a0001c0001t0006g0112 a0001c0001t0006g0134 a0001c0001t0006g0137 a0001c0001t0006g0147 a0001c0001t0014g0133 a0001c0001t0014g0138 a0001c0001t0021g0140 a0001c0001t0021g0214 a0001c0001t0025g0136 a0001c0001t0039g0105 a0001c0001t0047g0114 a0001c0001t0065g0060	25	214	0.1168	-11	c.-10 others(30): Show c.-105+2701_-105+2711delTATTAAAATTT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154043415	TATATATA others(4): Show TATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02280.hp1 NA18975.hp2 HG02280.hp1 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0045 a0001c0001t0015 a0001c0001t0045	a0001c0001t0015g0016 a0001c0001t0045g0211 a0001c0001t0015g0016 a0001c0001t0045g0211	2	214	0.0094	-11	c.143 others(30): Show c.143-96921_143-96911delATATATATATA	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	3/12			chr2	TogoVar
GALNT13_chr2_153866922_154458979	154298460	CATATATA others(4): Show CATATATAAATT	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02280.hp2 HG02809.hp1 others(4): Show HG01261.hp1 HG02280.hp2 HG02809.hp1 HG03195.hp1 HG03225.hp2 HG03540.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0012 a0001c0001t0019 others(3): Show a0001c0001t0006 a0001c0001t0012 a0001c0001t0019 a0001c0001t0053 a0001c0001t0076 a0001c0001t0077	a0001c0001t0006g0109 a0001c0001t0012g0154 a0001c0001t0019g0070 others(4): Show a0001c0001t0006g0109 a0001c0001t0012g0154 a0001c0001t0019g0070 a0001c0001t0019g0074 a0001c0001t0053g0032 a0001c0001t0076g0075 a0001c0001t0077g0083	7	214	0.0327	-11	c.976 others(28): Show c.976-2919_976-2909delAATTATATATA	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154354405	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01258.hp1 HG01358.hp2 others(6): Show HG00735.hp1 HG01258.hp1 HG01358.hp2 HG01978.hp2 HG02080.hp1 HG03688.hp1 HG03942.hp2 NA18990.hp2 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0014 a0001c0001t0018 a0001c0001t0021 a0001c0001t0025 a0001c0001t0046	a0001c0001t0001g0063 a0001c0001t0002g0139 a0001c0001t0003g0028 others(6): Show a0001c0001t0001g0063 a0001c0001t0002g0139 a0001c0001t0003g0028 a0001c0001t0007g0195 a0001c0001t0014g0138 a0001c0001t0018g0159 a0001c0001t0021g0214 a0001c0001t0025g0136 a0001c0001t0046g0186	9	214	0.0421	-11	c.115 others(32): Show c.1157-41557_1157-41547delTTTTTTTTTTT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154377666	CATTCATC others(4): Show CATTCATCATTT	C C	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02602.hp1 HG02965.hp2 others(2): Show HG02523.hp2 HG02602.hp1 HG02965.hp2 HG03491.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0027 a0001c0001t0041 others(2): Show a0001c0001t0009 a0001c0001t0027 a0001c0001t0041 a0001c0001t0048 a0001c0001t0070	a0001c0001t0009g0126 a0001c0001t0027g0014 a0001c0001t0041g0094 others(2): Show a0001c0001t0009g0126 a0001c0001t0027g0014 a0001c0001t0041g0094 a0001c0001t0048g0160 a0001c0001t0070g0158	5	214	0.0234	-11	c.115 others(32): Show c.1157-18321_1157-18311delCATCATTTATT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT14_chr2_30905467_31143440	30917076	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG03098.hp1 HG02723.hp2 HG03098.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0001 a0001c0001t0003 a0002c0003t0001	a0001c0001t0003g0183 a0002c0003t0001g0030 a0001c0001t0003g0183 a0002c0003t0001g0030	2	226	0.0089	-11	c.138 others(30): Show c.1381-4745_1381-4735delTTTTTTTTTTT	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	13/14			chr2	TogoVar
GALNT14_chr2_30905467_31143440	30923056	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0191 a0001c0001t0005g0191	1	226	0.0044	-11	c.138 others(30): Show c.1380+1052_1380+1062delAAAAAAAAAAA	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	13/14			chr2	TogoVar
GALNT14_chr2_30905467_31143440	31110193	CCTTCTCC others(4): Show CCTTCTCCCTTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03098.hp1 NA19030.hp2 HG01884.hp1 HG03098.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0002c0003t0005 a0001c0001t0001 a0002c0003t0001 a0002c0003t0005	a0001c0001t0001g0124 a0002c0003t0001g0030 a0002c0003t0005g0188 a0001c0001t0001g0124 a0002c0003t0001g0030 a0002c0003t0005g0188	3	226	0.0133	-11	c.129 others(30): Show c.129+27754_129+27764delAAAGGGAGAAG	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	1/14			chr2	TogoVar
GALNT15_chr3_16169680_16235165	16207533	AAAAAAAA others(4): Show AAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01346.hp1 HG01928.hp1 others(11): Show HG00642.hp2 HG01346.hp1 HG01928.hp1 HG01928.hp2 HG01978.hp1 HG01993.hp2 HG02523.hp2 HG04228.hp2 NA18940.hp1 NA18959.hp1 NA18998.hp2 NA19084.hp2 NA19088.hp1 NA20752.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0018 a0001c0001 a0005c0018	a0001c0001t0002 a0001c0001t0004 a0005c0018t0002 a0001c0001t0002 a0001c0001t0004 a0005c0018t0002	a0001c0001t0002g0004 a0001c0001t0002g0316 a0001c0001t0004g0012 others(8): Show a0001c0001t0002g0004 a0001c0001t0002g0316 a0001c0001t0004g0012 a0001c0001t0004g0064 a0001c0001t0004g0135 a0001c0001t0004g0190 a0001c0001t0004g0229 a0001c0001t0004g0283 a0001c0001t0004g0284 a0001c0001t0004g0298 a0005c0018t0002g0351	14	388	0.0361	-11	c.912 others(26): Show c.912-969_912-959delAAAAAAAAAAT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding	3/9			chr3	TogoVar
GALNT15_chr3_16169680_16235165	16232464	AAATAAAT others(4): Show AAATAAATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0247 a0001c0001t0001g0247	1	388	0.0026	-11	c.49 others(22): Show c.4965_*4975delAATAAATATAT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding		2300		chr3	TogoVar
GALNT16_chr14_69255158_69359466	69264671	GATTTTGT others(4): Show GATTTTGTATTT	G G	intron_variant intron_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0137	1	306	0.0033	-11	c.177 others(28): Show c.177+4206_177+4216delTTTTGTATTTA	GALNT16	ENSG00000100626.17	transcript	ENST00000448469.8	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr14	TogoVar
GALNT16_chr14_69255158_69359466	69296720	CAGATAGA others(4): Show CAGATAGATGAT	C C	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02486.hp2 NA19000.hp1 HG02015.hp2 HG02486.hp2 NA19000.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0002 a0001c0003t0001 a0002c0002t0001 a0001c0001t0002 a0001c0003t0001 a0002c0002t0001	a0001c0001t0002g0288 a0001c0003t0001g0165 a0002c0002t0001g0100 a0001c0001t0002g0288 a0001c0003t0001g0165 a0002c0002t0001g0100	3	306	0.0098	-11	c.178 others(30): Show c.178-23982_178-23972delGATAGATAGAT	GALNT16	ENSG00000100626.17	transcript	ENST00000448469.8	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr14	TogoVar
GALNT17_chr7_71127144_71718599	71265118	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0065 a0001c0001t0009g0065	1	76	0.0132	-11	c.239 others(30): Show c.239-70416_239-70406delTTTTTTTTTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71682593	CGAGTCCA others(4): Show CGAGTCCAGTGG	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00438.hp1 others(39): Show HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01106.hp1 HG01106.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01433.hp1 HG02040.hp1 HG02040.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02615.hp2 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03669.hp1 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG04228.hp2 NA18983.hp1 NA18983.hp2 NA19000.hp1 NA19000.hp2 NA19060.hp1 NA19060.hp2 NA20129.hp1 NA20752.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0002c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0002t0003 a0001c0002t0007 a0001c0002t0008 a0001c0003t0002 a0001c0003t0014 a0001c0004t0003 a0001c0004t0005 a0002c0010t0003	a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0041 others(39): Show a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0002g0018 a0001c0001t0003g0001 a0001c0001t0003g0011 a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0033 a0001c0001t0004g0035 a0001c0001t0005g0051 a0001c0001t0006g0056 a0001c0001t0006g0057 a0001c0001t0006g0064 a0001c0001t0006g0066 a0001c0001t0007g0055 a0001c0001t0007g0059 a0001c0001t0007g0062 a0001c0001t0009g0061 a0001c0001t0009g0063 a0001c0001t0011g0036 a0001c0001t0011g0040 a0001c0001t0011g0049 a0001c0001t0012g0008 a0001c0001t0012g0012 a0001c0001t0012g0014 a0001c0001t0013g0073 a0001c0001t0013g0075 a0001c0001t0015g0076 a0001c0001t0016g0043 a0001c0002t0003g0004 a0001c0002t0003g0006 a0001c0002t0007g0060 a0001c0002t0008g0025 a0001c0003t0002g0067 a0001c0003t0014g0068 a0001c0003t0014g0070 a0001c0004t0003g0013 a0001c0004t0005g0058 a0002c0010t0003g0009	42	76	0.5526	-11	c.150 others(30): Show c.1500+5288_1500+5298delGAGTCCAGTGG	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	9/10			chr7	TogoVar
GALNT18_chr11_11265877_11627005	11279316	ATTAAAAA others(4): Show ATTAAAAATTTC	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0181 a0001c0003t0001g0181	1	260	0.0039	-11	c.167 others(30): Show c.1678-8037_1678-8027delGAAATTTTTAA	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	10/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11421730	TTCTCTGC others(4): Show TTCTCTGCAGAG	T T	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0010 a0001c0002t0004g0010	1	260	0.0039	-11	c.595 others(30): Show c.595+10880_595+10890delCTCTGCAGAGA	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	3/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11516956	ACTAGGAG others(4): Show ACTAGGAGGTGG	A A	intron_variant intron_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0202 a0001c0002t0003g0202	1	260	0.0039	-11	c.236 others(30): Show c.236-68031_236-68021delCCACCTCCTAG	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11579653	GGCAGTGA others(4): Show GGCAGTGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00609.hp1 HG00639.hp2 others(46): Show HG00280.hp2 HG00609.hp1 HG00639.hp2 HG00733.hp1 HG01070.hp1 HG01074.hp1 HG01257.hp2 HG01884.hp1 HG01981.hp1 HG01981.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp2 HG02145.hp1 HG02257.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02630.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02809.hp1 HG02886.hp1 HG02896.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG04199.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18941.hp1 NA18984.hp1 NA19043.hp2 NA19084.hp1 NA20300.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0010 a0001c0018 a0001c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0001t0014 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0008 a0001c0003t0001 a0001c0003t0002 a0001c0004t0001 a0001c0004t0002 a0001c0004t0003 a0001c0004t0004 a0001c0004t0007 a0001c0005t0001 a0001c0006t0002 a0001c0009t0017 a0001c0010t0001 a0001c0018t0001 a0001c0020t0002	a0001c0001t0001g0106 a0001c0001t0001g0127 a0001c0001t0001g0149 others(46): Show a0001c0001t0001g0106 a0001c0001t0001g0127 a0001c0001t0001g0149 a0001c0001t0001g0252 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0028 a0001c0001t0002g0044 a0001c0001t0002g0056 a0001c0001t0002g0063 a0001c0001t0002g0077 a0001c0001t0002g0084 a0001c0001t0011g0001 a0001c0001t0014g0095 a0001c0002t0001g0230 a0001c0002t0001g0245 a0001c0002t0001g0254 a0001c0002t0001g0255 a0001c0002t0002g0019 a0001c0002t0002g0020 a0001c0002t0003g0170 a0001c0002t0003g0215 a0001c0002t0005g0004 a0001c0002t0008g0153 a0001c0003t0001g0126 a0001c0003t0001g0150 a0001c0003t0001g0181 a0001c0003t0001g0242 a0001c0003t0002g0025 a0001c0003t0002g0030 a0001c0003t0002g0049 a0001c0003t0002g0072 a0001c0004t0001g0105 a0001c0004t0001g0161 a0001c0004t0001g0231 a0001c0004t0002g0023 a0001c0004t0002g0032 a0001c0004t0003g0138 a0001c0004t0003g0168 a0001c0004t0004g0031 a0001c0004t0007g0090 a0001c0005t0001g0166 a0001c0006t0002g0021 a0001c0006t0002g0027 a0001c0006t0002g0029 a0001c0009t0017g0256 a0001c0010t0001g0201 a0001c0018t0001g0209 a0001c0020t0002g0034	49	260	0.1885	-11	c.235 others(30): Show c.235+41695_235+41705delTCTTTCACTGC	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11595024	AAGAATGA others(4): Show AAGAATGAATAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0153 a0001c0002t0008g0153	1	260	0.0039	-11	c.235 others(30): Show c.235+26324_235+26334delATATTCATTCT	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar
GALNT1_chr18_35576740_35716834	35703448	GGCATTTA others(4): Show GGCATTTAAAAT	G G	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	310	0.0032	-11	c.139 others(26): Show c.1399-58_1399-48delATTTAAAATGC	GALNT1	ENSG00000141429.14	transcript	ENST00000269195.6	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
GALNT2_chr1_230062238_230287122	230094163	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG03098.hp1 HG02615.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0308 a0001c0001t0003g0316 a0001c0001t0001g0308 a0001c0001t0003g0316	2	324	0.0062	-11	c.126 others(30): Show c.126+26774_126+26784delTTTTTTTTTTT	GALNT2	ENSG00000143641.10	transcript	ENST00000366672.5	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
GALNT3_chr2_165742588_165799247	165772584	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02970.hp2 HG03041.hp2 HG02486.hp2 HG02970.hp2 HG03041.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0209 a0002c0002t0001g0210 a0002c0002t0001g0211 a0002c0002t0001g0209 a0002c0002t0001g0210 a0002c0002t0001g0211	3	386	0.0078	-11	c.-10 others(30): Show c.-108-1787_-108-1777delTTTTTTTTTTT	GALNT3	ENSG00000115339.14	transcript	ENST00000392701.8	protein_coding	1/10			chr2	TogoVar

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