Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GZMH_chr14_24601480_24614685	24601656	CAATTTGA others(4): Show CAATTTGACACG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG01106.hp2 HG01167.hp1 others(17): Show HG00140.hp1 HG01106.hp2 HG01167.hp1 HG01169.hp1 HG01261.hp2 HG01515.hp1 HG01517.hp2 HG01981.hp2 HG01993.hp2 HG02055.hp2 HG02300.hp2 HG02559.hp2 HG02818.hp2 HG03098.hp1 HG03540.hp1 HG03942.hp2 HG06807.hp1 NA20300.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0003g0013	20	422	0.0474	-11	c.49 others(22): Show c.4936_*4946delCGTGTCAAATT	GZMH	ENSG00000100450.13	transcript	ENST00000216338.9	protein_coding		4823		chr14	TogoVar
GZMM_chr19_539053_554922	551693	CTCTTTCT others(4): Show CTCTTTCTTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01243.hp1 HG01978.hp1 others(15): Show HG01109.hp1 HG01243.hp1 HG01978.hp1 HG02055.hp2 HG02451.hp2 HG02622.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02818.hp2 HG02970.hp1 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03453.hp2 HG03579.hp2 NA18906.hp1 NA18948.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0004 a0001c0001t0001g0057 a0001c0001t0001g0089 others(10): Show a0001c0001t0001g0004 a0001c0001t0001g0057 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0108 a0001c0001t0001g0140 a0001c0001t0001g0226 a0003c0004t0001g0005	18	398	0.0452	-11	c.19 others(22): Show c.1903_*1913delTCTTTCTTTCT	GZMM	ENSG00000197540.8	transcript	ENST00000264553.6	protein_coding		1772		chr19	TogoVar
H1-1_chr6_26012032_26022787	26016761	CCTTGGTT others(4): Show CCTTGGTTCAAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	396	0.0025	-11	c.31 others(20): Show c.313_*323delATTGAACCAAG	H1-1	ENSG00000124610.5	transcript	ENST00000244573.5	protein_coding		270		chr6	TogoVar
H1-5_chr6_27861792_27872588	27864736	GAAAAAAA others(4): Show GAAAAAAAAAAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG00558.hp2 HG00621.hp1 others(58): Show HG00544.hp1 HG00558.hp2 HG00621.hp1 HG00642.hp1 HG00741.hp2 HG01192.hp2 HG01255.hp2 HG01952.hp1 HG01975.hp1 HG02040.hp1 HG02074.hp1 HG02083.hp2 HG02165.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02630.hp1 HG02683.hp2 HG02738.hp1 HG03041.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp2 HG03654.hp2 HG06807.hp1 NA18522.hp1 NA18941.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp2 NA18947.hp1 NA18951.hp1 NA18952.hp2 NA18961.hp2 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp2 NA18974.hp1 NA18975.hp2 NA18977.hp2 NA18983.hp2 NA18986.hp1 NA18991.hp2 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA19002.hp1 NA19007.hp1 NA19010.hp2 NA19054.hp1 NA19057.hp1 NA19063.hp2 NA19065.hp1 NA19067.hp1 NA19070.hp2 NA19074.hp2 NA19083.hp1 NA19087.hp2 NA19088.hp1 NA19090.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0009 a0001c0010 others(1): Show a0001c0001 a0001c0009 a0001c0010 a0007c0014	a0001c0001t0001 a0001c0009t0001 a0001c0010t0001 others(1): Show a0001c0001t0001 a0001c0009t0001 a0001c0010t0001 a0007c0014t0001	a0001c0001t0001g0000 a0001c0009t0001g0000 a0001c0010t0001g0000 others(1): Show a0001c0001t0001g0000 a0001c0009t0001g0000 a0001c0010t0001g0000 a0007c0014t0001g0000	61	390	0.1564	-11	c.21 others(22): Show c.2102_*2112delTTTTTTTTTTT	H1-5	ENSG00000184357.5	transcript	ENST00000331442.5	protein_coding		2055		chr6	TogoVar
H1-5_chr6_27861792_27872588	27870103	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	390	0.0026	-11	c.-25 others(22): Show c.-2585_-2575delAAAAAAAAAAA	H1-5	ENSG00000184357.5	transcript	ENST00000331442.5	protein_coding		2516		chr6	TogoVar
H1-6_chr6_26102412_26113135	26104794	AAAAAAAT others(4): Show AAAAAAATTATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0000 a0003c0003t0001g0000	1	408	0.0025	-11	c.26 others(22): Show c.2665_*2675delCATAATTTTTT	H1-6	ENSG00000187475.6	transcript	ENST00000338379.6	protein_coding		2617		chr6	TogoVar
H1-7_chr12_48323980_48335279	48330640	TATTTTAA others(4): Show TATTTTAATTTA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	424	0.0024	-11	c.58 others(20): Show c.582_*592delATTTTAATTTA	H1-7	ENSG00000187166.1	transcript	ENST00000335017.1	protein_coding		362		chr12	TogoVar
H1-8_chr3_129538175_129556467	129540495	TATATATA others(4): Show TATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp1 HG03041.hp1 HG03098.hp2 HG02630.hp1 HG03041.hp1 HG03098.hp2	a0003 a0005 a0003 a0005	a0003c0004 a0005c0007 a0003c0004 a0005c0007	a0003c0004t0001 a0005c0007t0001 a0003c0004t0001 a0005c0007t0001	a0003c0004t0001g0028 a0003c0004t0001g0042 a0005c0007t0001g0099 a0003c0004t0001g0028 a0003c0004t0001g0042 a0005c0007t0001g0099	3	422	0.0071	-11	c.-27 others(22): Show c.-2723_-2713delATATATATATA	H1-8	ENSG00000178804.8	transcript	ENST00000324382.7	protein_coding		2679		chr3	TogoVar
H1-8_chr3_129538175_129556467	129540497	TATATATA others(4): Show TATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0024 a0003c0004t0001g0024	1	422	0.0024	-11	c.-27 others(22): Show c.-2721_-2711delATATATATATA	H1-8	ENSG00000178804.8	transcript	ENST00000324382.7	protein_coding		2677		chr3	TogoVar
H1-8_chr3_129538175_129556467	129540509	TATATATA others(4): Show TATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG04228.hp2 HG00323.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0002 a0001c0003t0001g0114 a0001c0001t0001g0002 a0001c0003t0001g0114	2	422	0.0047	-11	c.-27 others(22): Show c.-2709_-2699delATATATATATA	H1-8	ENSG00000178804.8	transcript	ENST00000324382.7	protein_coding		2665		chr3	TogoVar
H2AC12_chr6_27142106_27152562	27150514	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	382	0.0026	-11	c.30 others(22): Show c.3000_*3010delAAAAAAAAAAA	H2AC12	ENSG00000274997.2	transcript	ENST00000377459.3	protein_coding		2953		chr6	TogoVar
H2AC16_chr6_27860317_27870798	27864736	GAAAAAAA others(4): Show GAAAAAAAAAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp1 HG00558.hp2 HG00621.hp2 others(55): Show HG00544.hp1 HG00558.hp2 HG00621.hp2 HG00642.hp1 HG00741.hp2 HG01081.hp1 HG01192.hp2 HG01255.hp2 HG01952.hp1 HG01975.hp1 HG02040.hp1 HG02074.hp2 HG02083.hp2 HG02165.hp2 HG02293.hp2 HG02300.hp1 HG02523.hp1 HG02630.hp1 HG02683.hp1 HG02738.hp1 HG03041.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp2 HG03654.hp1 HG06807.hp2 NA18522.hp1 NA18943.hp1 NA18944.hp2 NA18945.hp2 NA18947.hp1 NA18951.hp1 NA18952.hp2 NA18961.hp2 NA18965.hp1 NA18966.hp1 NA18966.hp2 NA18969.hp2 NA18974.hp2 NA18975.hp2 NA18977.hp2 NA18983.hp2 NA18986.hp1 NA18991.hp2 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA19002.hp1 NA19010.hp2 NA19054.hp1 NA19057.hp1 NA19063.hp2 NA19065.hp1 NA19070.hp2 NA19074.hp2 NA19083.hp1 NA19087.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0001t0001g0000 a0001c0002t0001g0000	58	374	0.1551	-11	c.-61 others(20): Show c.-618_-608delAAAAAAAAAAA	H2AC16	ENSG00000276903.2	transcript	ENST00000613174.2	protein_coding		580		chr6	TogoVar
H2AC7_chr6_26193784_26204293	26198263	AGCCGCTG others(4): Show AGCCGCTGCATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG01255.hp2 HG01361.hp1 others(30): Show HG00741.hp2 HG01255.hp2 HG01361.hp1 HG01891.hp1 HG02257.hp2 HG02280.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02717.hp2 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03098.hp1 HG03139.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA19030.hp2 NA19043.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0002c0007t0001 a0001c0001t0001 a0002c0007t0001	a0001c0001t0001g0000 a0002c0007t0001g0000 a0001c0001t0001g0000 a0002c0007t0001g0000	33	402	0.0821	-11	c.57 others(20): Show c.577_*587delAATGCAGCGGC	H2AC7	ENSG00000196866.3	transcript	ENST00000341023.2	protein_coding		520		chr6	TogoVar
H2AC8_chr6_26211921_26222437	26215157	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	362	0.0028	-11	c.-18 others(22): Show c.-1817_-1807delTTTTTTTTTTT	H2AC8	ENSG00000277075.3	transcript	ENST00000303910.5	protein_coding		1763		chr6	TogoVar
H2AZ2_chr7_44826978_44853087	44837422	AAAAAAAA others(4): Show AAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0320 a0001c0001t0018g0320	1	406	0.0025	-11	c.196 others(28): Show c.196-1775_196-1765delCTTTTTTTTTT	H2AZ2	ENSG00000105968.19	transcript	ENST00000308153.9	protein_coding	3/4			chr7	TogoVar
H2AZ2_chr7_44826978_44853087	44837433	GAAAAAAA others(4): Show GAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0249 a0001c0001t0003g0249	1	406	0.0025	-11	c.196 others(28): Show c.196-1786_196-1776delTTTTTTTTTTT	H2AZ2	ENSG00000105968.19	transcript	ENST00000308153.9	protein_coding	3/4			chr7	TogoVar
H2AZ2_chr7_44826978_44853087	44843137	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03579.hp1 HG02257.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0022 a0001c0001t0005 a0001c0001t0022	a0001c0001t0005g0120 a0001c0001t0022g0304 a0001c0001t0005g0120 a0001c0001t0022g0304	2	406	0.0049	-11	c.81+ others(24): Show c.81+129_81+139delTTTTTTTTTTT	H2AZ2	ENSG00000105968.19	transcript	ENST00000308153.9	protein_coding	2/4			chr7	TogoVar
H2BC10_chr6_26267931_26278412	26272712	TAAAAAAA others(4): Show TAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	396	0.0025	-11	c.-26 others(20): Show c.-263_-253delAAAAAAAAAAA	H2BC10	ENSG00000278588.2	transcript	ENST00000377733.4	protein_coding		218		chr6	TogoVar
H2BC12L_chr21_43560182_43570648	43561656	TATGGAGA others(4): Show TATGGAGATTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	409	0.0024	-11	c.-35 others(22): Show c.-3582_-3572delATGGAGATTTC	H2BC12L	ENSG00000234289.6	transcript	ENST00000599962.2	protein_coding		3525		chr21	TogoVar
H2BC12L_chr21_43560182_43570648	43569568	CTTTTTTT others(4): Show CTTTTTTTTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	409	0.0024	-11	c.39 others(22): Show c.3950_*3960delTTTTTTTTTCT	H2BC12L	ENSG00000234289.6	transcript	ENST00000599962.2	protein_coding		3921		chr21	TogoVar
H2BC12L_chr21_43560182_43570648	43570221	TTCTCAAT others(4): Show TTCTCAATTACA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG03041.hp2 HG03130.hp2 HG01884.hp2 HG03041.hp2 HG03130.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0000 a0004c0007t0001g0000	3	409	0.0073	-11	c.46 others(22): Show c.4603_*4613delTCTCAATTACA	H2BC12L	ENSG00000234289.6	transcript	ENST00000599962.2	protein_coding		4574		chr21	TogoVar
H2BC12_chr6_27141361_27151855	27150514	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	384	0.0026	-11	c.-37 others(22): Show c.-3727_-3717delTTTTTTTTTTT	H2BC12	ENSG00000197903.8	transcript	ENST00000356950.2	protein_coding		3660		chr6	TogoVar
H2BC7_chr6_26194516_26204988	26198263	AGCCGCTG others(4): Show AGCCGCTGCATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG01255.hp2 HG01361.hp1 others(29): Show HG00741.hp2 HG01255.hp2 HG01361.hp1 HG01891.hp1 HG02257.hp2 HG02280.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02717.hp2 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03098.hp1 HG03139.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA19030.hp2 NA19043.hp1 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0000 a0001c0002t0001g0000	32	400	0.0800	-11	c.-12 others(22): Show c.-1295_-1285delGCCGCTGCATT	H2BC7	ENSG00000277224.3	transcript	ENST00000356530.6	protein_coding		1252		chr6	TogoVar
H2BC8_chr6_26211200_26221688	26215157	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	366	0.0027	-11	c.10 others(22): Show c.1095_*1105delAAAAAAAAAAA	H2BC8	ENSG00000273802.3	transcript	ENST00000541790.4	protein_coding		1042		chr6	TogoVar
H3-3A_chr1_226057716_226077019	226074340	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00408.hp1 others(116): Show HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00597.hp2 HG00639.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01361.hp1 HG01496.hp1 HG01891.hp1 HG01891.hp2 HG01993.hp1 HG02027.hp1 HG02055.hp2 HG02056.hp1 HG02083.hp2 HG02109.hp1 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02572.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02809.hp1 HG02809.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03927.hp2 HG04184.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp1 NA18939.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18946.hp1 NA18947.hp2 NA18950.hp2 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18961.hp2 NA18965.hp1 NA18968.hp2 NA18973.hp1 NA18974.hp2 NA18979.hp2 NA18983.hp2 NA18995.hp2 NA19001.hp1 NA19005.hp1 NA19009.hp2 NA19030.hp1 NA19030.hp2 NA19054.hp2 NA19056.hp2 NA19060.hp2 NA19063.hp2 NA19070.hp2 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19083.hp2 NA19084.hp2 NA19087.hp2 NA19088.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0002t0002	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0020 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0077 a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0033 a0001c0001t0002g0040 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0005g0013 a0001c0001t0006g0001 a0001c0001t0008g0013 a0001c0002t0002g0071	119	434	0.2742	-11	c.28 others(22): Show c.2862_*2872delTTTTTTTTTTT	H3-3A	ENSG00000163041.13	transcript	ENST00000366815.10	protein_coding		2322		chr1	TogoVar
H3-3B_chr17_75771434_75784779	75782993	TCAAAAAA others(4): Show TCAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0054 a0001c0001t0036g0054	1	432	0.0023	-11	c.-33 others(22): Show c.-3358_-3348delTTTTTTTTTTG	H3-3B	ENSG00000132475.10	transcript	ENST00000254810.8	protein_coding		3215		chr17	TogoVar
H3C11_chr6_27866845_27877346	27870103	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	374	0.0027	-11	c.17 others(22): Show c.1791_*1801delAAAAAAAAAAA	H3C11	ENSG00000275379.2	transcript	ENST00000616365.2	protein_coding		1741		chr6	TogoVar
H3C11_chr6_27866845_27877346	27876576	TAAAAAAA others(4): Show TAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02165.hp2 HG02622.hp1 HG02145.hp1 HG02165.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0001t0001g0000 a0001c0002t0001g0000	3	374	0.0080	-11	c.-42 others(22): Show c.-4272_-4262delTTTTTTTTTTT	H3C11	ENSG00000275379.2	transcript	ENST00000616365.2	protein_coding		4231		chr6	TogoVar
H3C1_chr6_26015451_26025958	26016761	CCTTGGTT others(4): Show CCTTGGTTCAAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	396	0.0025	-11	c.-37 others(22): Show c.-3728_-3718delCTTGGTTCAAT	H3C1	ENSG00000275714.2	transcript	ENST00000613854.2	protein_coding		3689		chr6	TogoVar
H3C4_chr6_26191784_26202286	26198263	AGCCGCTG others(4): Show AGCCGCTGCATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG01255.hp2 HG01361.hp1 others(33): Show HG00741.hp2 HG01255.hp2 HG01361.hp1 HG01891.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18522.hp2 NA19030.hp2 NA19043.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0000 a0001c0003t0001g0000 a0001c0001t0001g0000 a0001c0003t0001g0000	36	396	0.0909	-11	c.-10 others(22): Show c.-1024_-1014delAATGCAGCGGC	H3C4	ENSG00000197409.8	transcript	ENST00000356476.3	protein_coding		978		chr6	TogoVar
H3C8_chr6_26265918_26276413	26272712	TAAAAAAA others(4): Show TAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	398	0.0025	-11	c.-13 others(22): Show c.-1339_-1329delTTTTTTTTTTT	H3C8	ENSG00000273983.2	transcript	ENST00000614378.2	protein_coding		1300		chr6	TogoVar
H4C11_chr6_27819092_27829480	27824729	ATGTAACC others(4): Show ATGTAACCCCCG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02280.hp1 HG02486.hp1 others(1): Show HG02257.hp1 HG02280.hp1 HG02486.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	4	396	0.0101	-11	c.29 others(20): Show c.294_*304delTGTAACCCCCG	H4C11	ENSG00000197238.5	transcript	ENST00000355057.3	protein_coding		250		chr6	TogoVar
H4C13_chr6_27868148_27878534	27870103	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	384	0.0026	-11	c.30 others(22): Show c.3085_*3095delAAAAAAAAAAA	H4C13	ENSG00000275126.2	transcript	ENST00000618305.2	protein_coding		3044		chr6	TogoVar
H4C13_chr6_27868148_27878534	27876576	TAAAAAAA others(4): Show TAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02165.hp2 HG02622.hp1 HG02145.hp1 HG02165.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	3	384	0.0078	-11	c.-30 others(22): Show c.-3077_-3067delTTTTTTTTTTT	H4C13	ENSG00000275126.2	transcript	ENST00000618305.2	protein_coding		3043		chr6	TogoVar
H4C14_chr1_149827657_149838052	149827857	CTTCTTTC others(4): Show CTTCTTTCTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	236	0.0042	-11	c.-48 others(22): Show c.-4827_-4817delTTCTTTCTTTT	H4C14	ENSG00000270882.3	transcript	ENST00000578186.3	protein_coding		4799		chr1	TogoVar
H4C15_chr1_149855764_149866159	149865947	AAAAGAAA others(4): Show AAAAGAAAGAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	206	0.0049	-11	c.-48 others(22): Show c.-4827_-4817delCTTCTTTCTTT	H4C15	ENSG00000270276.3	transcript	ENST00000579512.3	protein_coding		4789		chr1	TogoVar
H4C15_chr1_149855764_149866159	149865979	AAAGAAAG others(4): Show AAAGAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	206	0.0049	-11	c.-48 others(22): Show c.-4859_-4849delCTTTCTTTCTT	H4C15	ENSG00000270276.3	transcript	ENST00000579512.3	protein_coding		4821		chr1	TogoVar
H4C1_chr6_26016649_26027050	26016761	CCTTGGTT others(4): Show CCTTGGTTCAAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	398	0.0025	-11	c.-49 others(22): Show c.-4917_-4907delCTTGGTTCAAT	H4C1	ENSG00000278637.2	transcript	ENST00000617569.2	protein_coding		4887		chr6	TogoVar
HABP4_chr9_96445169_96496336	96456771	AAAAAAAA others(4): Show AAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0192 a0001c0001t0001g0192	1	306	0.0033	-11	c.350 others(28): Show c.350-1606_350-1596delAAAAAAAAATA	HABP4	ENSG00000130956.14	transcript	ENST00000375249.5	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
HABP4_chr9_96445169_96496336	96456779	AAATATAT others(4): Show AAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0013 a0001c0002t0002g0013	1	306	0.0033	-11	c.350 others(28): Show c.350-1598_350-1588delATATATATATA	HABP4	ENSG00000130956.14	transcript	ENST00000375249.5	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
HABP4_chr9_96445169_96496336	96456781	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA19240.hp1 HG03579.hp2 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0056 a0001c0002t0002g0060 a0001c0002t0002g0056 a0001c0002t0002g0060	2	306	0.0065	-11	c.350 others(28): Show c.350-1597_350-1587delTATATATATAT	HABP4	ENSG00000130956.14	transcript	ENST00000375249.5	protein_coding	1/7			chr9	TogoVar
HABP4_chr9_96445169_96496336	96456805	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19078.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0105 a0001c0001t0012g0105	1	306	0.0033	-11	c.350 others(28): Show c.350-1573_350-1563delTATATATATAT	HABP4	ENSG00000130956.14	transcript	ENST00000375249.5	protein_coding	1/7			chr9	TogoVar
HACD1_chr10_17584032_17622374	17614754	ATTTTATT others(4): Show ATTTTATTTTAT	A A	intron_variant intron_variant	MODIFIER	NA19055.hp1 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0258 a0001c0001t0002g0258	1	410	0.0024	-11	c.257 others(28): Show c.257+2318_257+2328delATAAAATAAAA	HACD1	ENSG00000165996.14	transcript	ENST00000361271.8	protein_coding	1/6			chr10	TogoVar
HACD2_chr3_123486554_123590053	123569988	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01258.hp2 HG02486.hp1 others(3): Show HG01257.hp1 HG01258.hp2 HG02486.hp1 HG04199.hp2 NA18960.hp1 NA18962.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0003 a0001c0003t0024 a0001c0003t0001 a0001c0003t0003 a0001c0003t0024	a0001c0003t0001g0008 a0001c0003t0003g0269 a0001c0003t0003g0293 others(2): Show a0001c0003t0001g0008 a0001c0003t0003g0269 a0001c0003t0003g0293 a0001c0003t0003g0320 a0001c0003t0024g0326	6	350	0.0171	-11	c.274 others(28): Show c.274-2219_274-2209delTTTTTTTTTTT	HACD2	ENSG00000206527.10	transcript	ENST00000383657.10	protein_coding	2/6			chr3	TogoVar
HACD2_chr3_123486554_123590053	123578028	ACCCCACT others(4): Show ACCCCACTCTCT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0118 a0001c0001t0002g0118	1	350	0.0029	-11	c.273 others(28): Show c.273+4173_273+4183delAGAGAGTGGGG	HACD2	ENSG00000206527.10	transcript	ENST00000383657.10	protein_coding	2/6			chr3	TogoVar
HACD2_chr3_123486554_123590053	123578106	TTATAAAT others(4): Show TTATAAATGAAA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0118 a0001c0001t0002g0118	1	350	0.0029	-11	c.273 others(28): Show c.273+4095_273+4105delTTTCATTTATA	HACD2	ENSG00000206527.10	transcript	ENST00000383657.10	protein_coding	2/6			chr3	TogoVar
HACD3_chr15_65525463_65583349	65549426	GAAAAAAA others(4): Show GAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0304 a0001c0001t0002g0304	1	328	0.0031	-11	c.88- others(26): Show c.88-2236_88-2226delAAAAAAAAAAA	HACD3	ENSG00000074696.13	transcript	ENST00000261875.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
HACL1_chr3_15555699_15606569	15572087	GTCTCGGC others(4): Show GTCTCGGCCTCC	G G	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0297 a0001c0001t0001g0297	1	428	0.0023	-11	c.994 others(26): Show c.994-329_994-319delGGAGGCCGAGA	HACL1	ENSG00000131373.15	transcript	ENST00000321169.10	protein_coding	11/16			chr3	TogoVar
HADHB_chr2_26239939_26295465	26294409	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03225.hp2 HG03486.hp2 HG03225.hp2 HG03486.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0004 a0003c0005t0004	a0003c0005t0004g0081 a0003c0005t0004g0089 a0003c0005t0004g0081 a0003c0005t0004g0089	2	290	0.0069	-11	c.44 others(22): Show c.4457_*4467delAAAAAAAAAAA	HADHB	ENSG00000138029.14	transcript	ENST00000317799.10	protein_coding		3945		chr2	TogoVar
HAGH_chr16_1802629_1831825	1815932	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0111 a0001c0001t0003g0111	1	436	0.0023	-11	c.747 others(26): Show c.747+950_747+960delAAAAAAAAAAA	HAGH	ENSG00000063854.13	transcript	ENST00000397356.8	protein_coding	7/8			chr16	TogoVar

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