Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
IQGAP2_chr5_76398285_76713132	76529218	AATGATGT others(4): Show AATGATGTACAT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02451.hp1 HG03453.hp2 HG02055.hp1 HG02451.hp1 HG03453.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0003 a0003c0004 a0001c0002 a0001c0003 a0003c0004	a0001c0002t0014 a0001c0003t0001 a0003c0004t0009 a0001c0002t0014 a0001c0003t0001 a0003c0004t0009	a0001c0002t0014g0069 a0001c0003t0001g0192 a0003c0004t0009g0118 a0001c0002t0014g0069 a0001c0003t0001g0192 a0003c0004t0009g0118	3	222	0.0135	-11	c.147 others(30): Show c.147-33173_147-33163delTGTACATATGA	IQGAP2	ENSG00000145703.17	transcript	ENST00000274364.11	protein_coding	2/35		INFO_REALIGN_3_PRIME	chr5	TogoVar
IQGAP2_chr5_76398285_76713132	76551875	GGGGGAGG others(4): Show GGGGGAGGGGGA	G G	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0021 a0021	a0021c0028 a0021c0028	a0021c0028t0010 a0021c0028t0010	a0021c0028t0010g0066 a0021c0028t0010g0066	1	222	0.0045	-11	c.147 others(30): Show c.147-10495_147-10485delGAGGGGGAGGG	IQGAP2	ENSG00000145703.17	transcript	ENST00000274364.11	protein_coding	2/35		INFO_REALIGN_3_PRIME	chr5	TogoVar
IQGAP2_chr5_76398285_76713132	76610104	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18957.hp2 NA18957.hp2	a0014 a0014	a0014c0045 a0014c0045	a0014c0045t0006 a0014c0045t0006	a0014c0045t0006g0015 a0014c0045t0006g0015	1	222	0.0045	-11	c.135 others(28): Show c.1358-914_1358-904delATATATATATT	IQGAP2	ENSG00000145703.17	transcript	ENST00000274364.11	protein_coding	12/35		INFO_REALIGN_3_PRIME	chr5	TogoVar
IQGAP2_chr5_76398285_76713132	76699604	TTTCTCTC others(4): Show TTTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG03688.hp2 HG02148.hp2 HG03688.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0006 a0001c0002 a0002c0006	a0001c0002t0002 a0002c0006t0002 a0001c0002t0002 a0002c0006t0002	a0001c0002t0002g0178 a0002c0006t0002g0098 a0001c0002t0002g0178 a0002c0006t0002g0098	2	222	0.0090	-11	c.436 others(30): Show c.4367+1459_4368-1460delTCTCTCTCTCT	IQGAP2	ENSG00000145703.17	transcript	ENST00000274364.11	protein_coding	33/35		INFO_REALIGN_3_PRIME	chr5	TogoVar
IQGAP3_chr1_156520405_156577565	156571845	GCCCCACC others(4): Show GCCCCACCCATC	G G	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0001 a0002c0006t0001	a0002c0006t0001g0082 a0002c0006t0001g0082	1	340	0.0029	-11	c.37+ others(24): Show c.37+637_37+647delGATGGGTGGGG	IQGAP3	ENSG00000183856.11	transcript	ENST00000361170.7	protein_coding	1/37			chr1	TogoVar
IQSEC1_chr3_12892043_13078429	12984815	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0035 a0004c0005t0035	a0004c0005t0035g0062 a0004c0005t0035g0062	1	250	0.0040	-11	c.24- others(28): Show c.24-42961_24-42951delAAAAAAAAAAA	IQSEC1	ENSG00000144711.17	transcript	ENST00000613206.2	protein_coding	1/13			chr3	TogoVar
IQSEC1_chr3_12892043_13078429	13003276	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0226 a0001c0001t0006g0226	1	250	0.0040	-11	c.24- others(28): Show c.24-61422_24-61412delTTTTTTTTTTT	IQSEC1	ENSG00000144711.17	transcript	ENST00000613206.2	protein_coding	1/13			chr3	TogoVar
IQSEC2_chrX_53227876_53326350	53289080	CTGCTCTC others(4): Show CTGCTCTCTCCT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp1 HG01884.hp1 others(23): Show HG00735.hp2 HG00738.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG02109.hp1 HG02257.hp1 HG02258.hp1 HG02486.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 NA18906.hp1 NA19030.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0004t0004	a0001c0001t0001g0091 a0001c0001t0001g0139 a0001c0001t0001g0140 others(23): Show a0001c0001t0001g0091 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0146 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0183 a0001c0001t0001g0195 a0001c0001t0001g0207 a0001c0001t0001g0211 a0001c0001t0002g0143 a0001c0002t0001g0015 a0001c0002t0001g0142 a0001c0002t0001g0144 a0001c0002t0001g0153 a0001c0002t0001g0184 a0001c0002t0001g0191 a0001c0002t0001g0206 a0001c0004t0004g0001	26	213	0.1221	-11	c.737 others(28): Show c.737+2804_737+2814delAGGAGAGAGCA	IQSEC2	ENSG00000124313.19	transcript	ENST00000642864.1	protein_coding	2/14			chrX	TogoVar
IRAG1_chr11_10568095_10698755	10586782	GTATGTTT others(4): Show GTATGTTTTAGA	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01081.hp2 HG02280.hp2 others(3): Show HG01069.hp2 HG01081.hp2 HG02280.hp2 HG03669.hp1 HG03688.hp2 HG03834.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0014 a0001c0008 a0002c0014	a0001c0008t0001 a0001c0008t0005 a0002c0014t0005 a0001c0008t0001 a0001c0008t0005 a0002c0014t0005	a0001c0008t0001g0095 a0001c0008t0005g0129 a0001c0008t0005g0244 others(3): Show a0001c0008t0001g0095 a0001c0008t0005g0129 a0001c0008t0005g0244 a0001c0008t0005g0251 a0001c0008t0005g0252 a0002c0014t0005g0049	6	278	0.0216	-11	c.224 others(30): Show c.2240+4755_2240+4765delTCTAAAACATA	IRAG1	ENSG00000072952.21	transcript	ENST00000423302.7	protein_coding	18/20			chr11	TogoVar
IRAG2_chr12_25047706_25113335	25050533	AAACAAAC others(4): Show AAACAAACAAAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18982.hp2 NA18982.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0009 a0003c0003t0009	a0003c0003t0009g0078 a0003c0003t0009g0078	1	344	0.0029	-11	c.-28 others(22): Show c.-2869_-2859delAACAAACAAAC	IRAG2	ENSG00000118308.16	transcript	ENST00000556887.6	protein_coding		2172		chr12	TogoVar
IRAK2_chr3_10159919_10248745	10166608	GTTAAATA others(4): Show GTTAAATATTCT	G G	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00639.hp1 HG01074.hp2 others(45): Show HG00558.hp1 HG00639.hp1 HG01074.hp2 HG01081.hp2 HG01175.hp2 HG01243.hp1 HG01346.hp2 HG01515.hp2 HG01891.hp2 HG02055.hp2 HG02257.hp1 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02683.hp1 HG02717.hp2 HG02809.hp1 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03486.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03669.hp2 HG03688.hp1 HG03927.hp2 HG04184.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18942.hp1 NA18951.hp1 NA18969.hp1 NA19005.hp2 NA19030.hp2 NA19043.hp2 NA19082.hp1 NA19082.hp2 NA19090.hp1 NA19240.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0008 a0012 a0014	a0001c0001 a0001c0003 a0002c0002 others(6): Show a0001c0001 a0001c0003 a0002c0002 a0002c0006 a0003c0004 a0004c0005 a0008c0011 a0012c0019 a0014c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0003t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0010 a0002c0006t0001 a0003c0004t0001 a0004c0005t0001 a0008c0011t0004 a0012c0019t0002 a0014c0015t0008	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0015 others(45): Show a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0096 a0001c0001t0001g0103 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0292 a0001c0001t0002g0055 a0001c0001t0002g0125 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0160 a0001c0001t0002g0219 a0001c0001t0003g0278 a0001c0001t0003g0281 a0001c0001t0003g0286 a0001c0001t0003g0288 a0001c0003t0001g0090 a0001c0003t0001g0252 a0001c0003t0001g0270 a0002c0002t0001g0045 a0002c0002t0001g0046 a0002c0002t0001g0056 a0002c0002t0001g0161 a0002c0002t0001g0162 a0002c0002t0001g0205 a0002c0002t0001g0206 a0002c0002t0001g0208 a0002c0002t0001g0213 a0002c0002t0001g0218 a0002c0002t0001g0220 a0002c0002t0002g0283 a0002c0002t0010g0113 a0002c0006t0001g0159 a0002c0006t0001g0284 a0002c0006t0001g0285 a0003c0004t0001g0122 a0004c0005t0001g0051 a0008c0011t0004g0014 a0012c0019t0002g0204 a0014c0015t0008g0221	48	292	0.1644	-11	c.94+ others(26): Show c.94+1562_94+1572delTAAATATTCTT	IRAK2	ENSG00000134070.5	transcript	ENST00000256458.5	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
IRAK2_chr3_10159919_10248745	10172837	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	292	0.0034	-11	c.95- others(26): Show c.95-4987_95-4977delAAAAAAAAAAA	IRAK2	ENSG00000134070.5	transcript	ENST00000256458.5	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
IRF1_chr5_132476609_132495773	132476853	CCCATCCC others(4): Show CCCATCCCAACA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19055.hp1 NA19055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0006 a0001c0002t0003g0006	1	436	0.0023	-11	c.70 others(22): Show c.7087_*7097delTGTTGGGATGG	IRF1	ENSG00000125347.15	transcript	ENST00000245414.9	protein_coding		4755		chr5	TogoVar
IRF2_chr4_184382729_184479550	184395412	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02109.hp2 HG02451.hp1 others(6): Show HG01891.hp2 HG02109.hp2 HG02451.hp1 HG02486.hp2 HG02572.hp2 HG02622.hp2 HG02965.hp1 HG03225.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0001 a0001c0001t0002 a0001c0001t0007	a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0243 others(6): Show a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0243 a0001c0001t0001g0251 a0001c0001t0001g0336 a0001c0001t0002g0187 a0001c0001t0002g0206 a0001c0001t0002g0244 a0001c0001t0007g0363	9	376	0.0239	-11	c.694 others(28): Show c.694+3492_694+3502delTTTTTTTTTTT	IRF2	ENSG00000168310.12	transcript	ENST00000393593.8	protein_coding	7/8			chr4	TogoVar
IRF2_chr4_184382729_184479550	184412005	TAAAAAAA others(4): Show TAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01255.hp1 HG01433.hp1 others(7): Show HG00642.hp2 HG01255.hp1 HG01433.hp1 HG01516.hp2 HG01517.hp1 HG02602.hp2 HG03490.hp2 HG03492.hp2 HG03654.hp2 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0002t0001	a0001c0001t0001g0005 a0001c0001t0003g0225 a0001c0001t0003g0226 others(6): Show a0001c0001t0001g0005 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0227 a0001c0001t0003g0304 a0001c0001t0004g0150 a0001c0002t0001g0154 a0001c0002t0001g0156 a0001c0002t0001g0323	10	376	0.0266	-11	c.412 others(28): Show c.412-3741_412-3731delTTTTTTTTTTT	IRF2	ENSG00000168310.12	transcript	ENST00000393593.8	protein_coding	5/8			chr4	TogoVar
IRF6_chr1_209780617_209811142	209805127	GTCAACAC others(4): Show GTCAACACCAGC	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00544.hp2 others(110): Show HG00280.hp2 HG00323.hp2 HG00544.hp2 HG00597.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01168.hp2 HG01192.hp1 HG01256.hp2 HG01257.hp1 HG01346.hp1 HG01358.hp1 HG01496.hp1 HG01515.hp1 HG01891.hp2 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp2 HG02083.hp1 HG02129.hp1 HG02165.hp1 HG02257.hp1 HG02280.hp1 HG02293.hp2 HG02602.hp1 HG02622.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02896.hp1 HG02897.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp2 HG03130.hp1 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03654.hp2 HG03669.hp2 HG03704.hp2 HG03834.hp1 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18944.hp1 NA18946.hp2 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp1 NA18955.hp2 NA18957.hp2 NA18959.hp2 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18966.hp2 NA18968.hp1 NA18970.hp2 NA18973.hp2 NA18983.hp2 NA18984.hp1 NA18986.hp2 NA18987.hp2 NA18991.hp2 NA18992.hp1 NA18994.hp1 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19043.hp1 NA19056.hp2 NA19062.hp1 NA19064.hp2 NA19067.hp2 NA19070.hp2 NA19072.hp1 NA19074.hp2 NA19079.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0010 a0001c0001 a0001c0007 a0001c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0012 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0007t0001 a0001c0010t0012	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0008 others(67): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0003g0034 a0001c0001t0003g0106 a0001c0001t0008g0029 a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0008g0072 a0001c0001t0008g0081 a0001c0001t0008g0082 a0001c0001t0008g0085 a0001c0001t0008g0090 a0001c0001t0008g0094 a0001c0001t0008g0098 a0001c0001t0008g0100 a0001c0001t0008g0103 a0001c0001t0008g0108 a0001c0001t0008g0109 a0001c0001t0012g0033 a0001c0001t0012g0058 a0001c0001t0012g0060 a0001c0001t0015g0061 a0001c0001t0015g0062 a0001c0001t0015g0063 a0001c0001t0018g0084 a0001c0001t0019g0101 a0001c0007t0001g0102 a0001c0010t0012g0059	113	428	0.2640	-11	c.-76 others(26): Show c.-76+809_-76+819delGCTGGTGTTGA	IRF6	ENSG00000117595.13	transcript	ENST00000367021.8	protein_coding	1/8			chr1	TogoVar
IRF6_chr1_209780617_209811142	209810607	TATTTGGA others(4): Show TATTTGGAAGTA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18956.hp1 NA18956.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0137 a0001c0001t0003g0137	1	428	0.0023	-11	c.-47 others(22): Show c.-4747_-4737delTACTTCCAAAT	IRF6	ENSG00000117595.13	transcript	ENST00000367021.8	protein_coding		4466		chr1	TogoVar
IRX4_chr5_1872413_1887925	1884095	AGGCGGCA others(4): Show AGGCGGCAAGGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00408.hp1 others(279): Show HG00099.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01261.hp1 HG01261.hp2 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18976.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18990.hp1 NA18990.hp2 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19077.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(7): Show a0001 a0002 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011	a0001c0001 a0001c0002 a0001c0003 others(15): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008 a0001c0009 a0001c0011 a0001c0015 a0002c0005 a0002c0006 a0002c0007 a0004c0012 a0005c0018 a0006c0020 a0007c0021 a0008c0019 a0009c0017 a0010c0013 a0011c0016	a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 others(31): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 a0001c0002t0004 a0001c0002t0006 a0001c0002t0008 a0001c0002t0010 a0001c0002t0011 a0001c0002t0016 a0001c0002t0017 a0001c0002t0018 a0001c0003t0003 a0001c0003t0012 a0001c0003t0013 a0001c0003t0015 a0001c0008t0002 a0001c0009t0002 a0001c0011t0003 a0001c0015t0003 a0002c0005t0004 a0002c0005t0009 a0002c0005t0014 a0002c0006t0001 a0002c0006t0004 a0002c0006t0005 a0002c0007t0004 a0004c0012t0002 a0005c0018t0002 a0006c0020t0002 a0007c0021t0002 a0008c0019t0002 a0009c0017t0002 a0010c0013t0004 a0011c0016t0003	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0055 others(78): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0055 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0077 a0001c0001t0004g0037 a0001c0001t0004g0044 a0001c0001t0004g0045 a0001c0002t0002g0003 a0001c0002t0002g0005 a0001c0002t0002g0012 a0001c0002t0002g0013 a0001c0002t0002g0031 a0001c0002t0002g0032 a0001c0002t0002g0033 a0001c0002t0002g0081 a0001c0002t0002g0082 a0001c0002t0002g0083 a0001c0002t0002g0085 a0001c0002t0002g0087 a0001c0002t0002g0088 a0001c0002t0002g0090 a0001c0002t0002g0093 a0001c0002t0002g0099 a0001c0002t0002g0101 a0001c0002t0002g0103 a0001c0002t0002g0104 a0001c0002t0002g0105 a0001c0002t0002g0106 a0001c0002t0002g0107 a0001c0002t0002g0112 a0001c0002t0002g0113 a0001c0002t0002g0114 a0001c0002t0002g0115 a0001c0002t0004g0036 a0001c0002t0006g0078 a0001c0002t0008g0034 a0001c0002t0008g0108 a0001c0002t0008g0110 a0001c0002t0010g0094 a0001c0002t0010g0109 a0001c0002t0010g0111 a0001c0002t0011g0035 a0001c0002t0016g0091 a0001c0002t0017g0080 a0001c0002t0018g0092 a0001c0003t0003g0001 a0001c0003t0003g0020 a0001c0003t0003g0021 a0001c0003t0003g0039 a0001c0003t0003g0041 a0001c0003t0003g0050 a0001c0003t0003g0051 a0001c0003t0012g0042 a0001c0003t0013g0043 a0001c0003t0015g0079 a0001c0008t0002g0084 a0001c0009t0002g0017 a0001c0009t0002g0098 a0001c0011t0003g0018 a0001c0015t0003g0040 a0002c0005t0004g0007 a0002c0005t0004g0046 a0002c0005t0004g0052 a0002c0005t0009g0023 a0002c0005t0009g0038 a0002c0005t0014g0048 a0002c0006t0001g0027 a0002c0006t0004g0014 a0002c0006t0005g0010 a0002c0007t0004g0011 a0004c0012t0002g0089 a0004c0012t0002g0095 a0005c0018t0002g0096 a0006c0020t0002g0100 a0007c0021t0002g0097 a0008c0019t0002g0102 a0009c0017t0002g0086 a0010c0013t0004g0047 a0011c0016t0003g0049	282	436	0.6468	-11	c.-14 others(22): Show c.-1459_-1449delCCCTTGCCGCC	IRX4	ENSG00000113430.10	transcript	ENST00000231357.7	protein_coding		1171		chr5	TogoVar
IRX6_chr16_55319203_55335756	55325561	GAAAGAAA others(4): Show GAAAGAAAGAGA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0216 a0005c0006t0001g0216	1	448	0.0022	-11	c.45+ others(24): Show c.45+428_45+438delAGAAAGAGAAA	IRX6	ENSG00000159387.8	transcript	ENST00000290552.8	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr16	TogoVar
IRX6_chr16_55319203_55335756	55335364	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG01515.hp1 NA19089.hp1 HG00544.hp2 HG01515.hp1 NA19089.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0006 a0001c0001 a0005c0006	a0001c0001t0001 a0001c0001t0008 a0005c0006t0001 a0001c0001t0001 a0001c0001t0008 a0005c0006t0001	a0001c0001t0001g0062 a0001c0001t0008g0205 a0005c0006t0001g0051 a0001c0001t0001g0062 a0001c0001t0008g0205 a0005c0006t0001g0051	3	448	0.0067	-11	c.50 others(22): Show c.5060_*5070delAAAAAAAAAAA	IRX6	ENSG00000159387.8	transcript	ENST00000290552.8	protein_coding		4609		chr16	TogoVar
ISCA1_chr9_86259546_86287538	86276870	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0128 a0001c0001t0005g0128	1	410	0.0024	-11	c.82- others(26): Show c.82-2639_82-2629delTTTTTTTTTTT	ISCA1	ENSG00000135070.15	transcript	ENST00000375991.9	protein_coding	1/3			chr9	TogoVar
ISG20L2_chr1_156716895_156733766	156727924	ATTGGTGT others(4): Show ATTGGTGTTAGC	A A	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0044	1	404	0.0025	-11	c.-11 others(28): Show c.-117-166_-117-156delGCTAACACCAA	ISG20L2	ENSG00000143319.17	transcript	ENST00000368219.2	protein_coding	1/3			chr1	TogoVar
ISG20_chr15_88634016_88661483	88641926	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02976.hp2 HG03704.hp1 others(7): Show HG02559.hp1 HG02976.hp2 HG03704.hp1 NA18954.hp1 NA18954.hp2 NA19001.hp2 NA19055.hp1 NA19084.hp1 NA20805.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0002g0092 others(7): Show a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0004g0065	10	436	0.0229	-11	c.228 others(28): Show c.228+2349_228+2359delTTTTTTTTTTT	ISG20	ENSG00000172183.16	transcript	ENST00000306072.10	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr15	TogoVar
ISL1_chr5_51378448_51399730	51390636	CTTTTTCT others(4): Show CTTTTTCTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG03540.hp2 NA18988.hp1 HG02897.hp2 HG03540.hp2 NA18988.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0067 a0001c0002t0002g0076 a0001c0002t0002g0180 a0001c0002t0002g0067 a0001c0002t0002g0076 a0001c0002t0002g0180	3	342	0.0088	-11	c.766 others(26): Show c.766-632_766-622delCTTTTTTTTTT	ISL1	ENSG00000016082.15	transcript	ENST00000230658.12	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr5	TogoVar
ISL1_chr5_51378448_51399730	51390642	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01517.hp2 HG03579.hp1 others(1): Show HG01109.hp2 HG01517.hp2 HG03579.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0023 a0001c0001t0004g0086 a0001c0001t0001g0023 a0001c0001t0004g0086	4	342	0.0117	-11	c.766 others(26): Show c.766-604_766-594delTTTTTTTTTTT	ISL1	ENSG00000016082.15	transcript	ENST00000230658.12	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr5	TogoVar
ISOC2_chr19_55447985_55466642	55448685	TACACACA others(4): Show TACACACACACC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	380	0.0026	-11	c.46 others(22): Show c.4612_*4622delGGTGTGTGTGT	ISOC2	ENSG00000063241.8	transcript	ENST00000425675.7	protein_coding		4299		chr19	TogoVar
ISOC2_chr19_55447985_55466642	55448784	ACACACAC others(4): Show ACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	380	0.0026	-11	c.45 others(22): Show c.4513_*4523delGTGTGTGTGTG	ISOC2	ENSG00000063241.8	transcript	ENST00000425675.7	protein_coding		4200		chr19	TogoVar
ISOC2_chr19_55447985_55466642	55464917	GGGAACAA others(4): Show GGGAACAAAGGC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG00642.hp1 HG01109.hp1 others(20): Show HG00639.hp2 HG00642.hp1 HG01109.hp1 HG01167.hp2 HG01243.hp2 HG01884.hp1 HG01891.hp1 HG02257.hp1 HG02280.hp2 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG02976.hp2 HG03139.hp1 HG03225.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp1 NA20129.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0006 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0006 a0001c0002t0001 a0001c0003t0001 a0001c0003t0004	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0037 others(8): Show a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0006g0025 a0001c0002t0001g0098 a0001c0003t0001g0101 a0001c0003t0004g0020 a0001c0003t0004g0102	23	380	0.0605	-11	c.-34 others(22): Show c.-3420_-3410delGCCTTTGTTCC	ISOC2	ENSG00000063241.8	transcript	ENST00000425675.7	protein_coding		3276		chr19	TogoVar
IST1_chr16_71890531_71936199	71892178	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp1 HG01361.hp2 HG01175.hp1 HG01361.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0007 a0002c0003t0007	a0002c0003t0007g0083 a0002c0003t0007g0180 a0002c0003t0007g0083 a0002c0003t0007g0180	2	352	0.0057	-11	c.-34 others(22): Show c.-3426_-3416delAAAAAAAAAAA	IST1	ENSG00000182149.21	transcript	ENST00000378799.11	protein_coding		3352		chr16	TogoVar
IST1_chr16_71890531_71936199	71908296	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02717.hp1 HG02922.hp1 others(1): Show HG02055.hp2 HG02717.hp1 HG02922.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0010 a0001c0001t0001g0062 a0001c0007t0001g0053 a0001c0001t0001g0010 a0001c0001t0001g0062 a0001c0007t0001g0053	4	352	0.0114	-11	c.-15 others(28): Show c.-15-7318_-15-7308delTTTTTTTTTTT	IST1	ENSG00000182149.21	transcript	ENST00000378799.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr16	TogoVar
IST1_chr16_71890531_71936199	71932720	ATCCGCTG others(4): Show ATCCGCTGGCTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0007 a0002c0003t0007	a0002c0003t0007g0180 a0002c0003t0007g0180	1	352	0.0028	-11	c.49 others(22): Show c.4908_*4918delTCCGCTGGCTT	IST1	ENSG00000182149.21	transcript	ENST00000378799.11	protein_coding		1522		chr16	TogoVar
IST1_chr16_71890531_71936199	71932780	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0161 a0001c0001t0007g0161	1	352	0.0028	-11	c.49 others(22): Show c.4968_*4978delTTTTTTTTTTT	IST1	ENSG00000182149.21	transcript	ENST00000378799.11	protein_coding		1582		chr16	TogoVar
ISY1_chr3_129122415_129166063	129149609	AAATATAT others(4): Show AAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0108 a0001c0001t0002g0108	1	366	0.0027	-11	c.188 others(28): Show c.188-3747_188-3737delATATATATATT	ISY1	ENSG00000240682.10	transcript	ENST00000393295.8	protein_coding	5/10			chr3	TogoVar
ISY1_chr3_129122415_129166063	129164210	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp1 HG02970.hp2 HG03516.hp2 others(4): Show HG02080.hp1 HG02970.hp2 HG03516.hp2 HG03942.hp2 HG04199.hp1 NA19043.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0013 a0001c0001t0003 a0001c0001t0013	a0001c0001t0003g0053 a0001c0001t0003g0056 a0001c0001t0003g0057 others(4): Show a0001c0001t0003g0053 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0003g0058 a0001c0001t0003g0070 a0001c0001t0013g0052 a0001c0001t0013g0055	7	366	0.0191	-11	c.-32 others(22): Show c.-3246_-3236delTTTTTTTTTTT	ISY1	ENSG00000240682.10	transcript	ENST00000393295.8	protein_coding		3148		chr3	TogoVar
ITCH_chr20_34358273_34516773	34375696	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02723.hp2 HG04204.hp2 others(1): Show HG02602.hp2 HG02723.hp2 HG04204.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0124 a0001c0001t0006g0125 a0001c0001t0006g0144 others(1): Show a0001c0001t0006g0124 a0001c0001t0006g0125 a0001c0001t0006g0144 a0001c0001t0006g0145	4	294	0.0136	-11	c.-22 others(28): Show c.-22+6251_-22+6261delTTTTTTTTTTT	ITCH	ENSG00000078747.17	transcript	ENST00000374864.10	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr20	TogoVar
ITCH_chr20_34358273_34516773	34385213	GTGTGTGT others(4): Show GTGTGTGTGGTT	G G	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG04204.hp2 HG02602.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0124 a0001c0001t0006g0125 a0001c0001t0006g0124 a0001c0001t0006g0125	2	294	0.0068	-11	c.-21 others(28): Show c.-21-8576_-21-8566delGTGTGTGGTTT	ITCH	ENSG00000078747.17	transcript	ENST00000374864.10	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr20	TogoVar
ITCH_chr20_34358273_34516773	34424935	TGTTTGCT others(4): Show TGTTTGCTGTTA	T T	intron_variant intron_variant	MODIFIER	NA19076.hp2 NA19076.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0003 a0001c0001t0008g0003	1	294	0.0034	-11	c.521 others(26): Show c.521+412_521+422delTTTGCTGTTAG	ITCH	ENSG00000078747.17	transcript	ENST00000374864.10	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr20	TogoVar
ITCH_chr20_34358273_34516773	34499272	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0253 a0001c0001t0001g0253	1	294	0.0034	-11	c.241 others(30): Show c.2417-5035_2417-5025delTTTTTTTTTTT	ITCH	ENSG00000078747.17	transcript	ENST00000374864.10	protein_coding	23/24		INFO_REALIGN_3_PRIME	chr20	TogoVar
ITFG1_chr16_47149391_47466063	47244590	TTTGTGTG others(4): Show TTTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG03669.hp1 HG00642.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0110 a0001c0001t0001g0033 a0001c0001t0001g0110	2	110	0.0182	-11	c.133 others(30): Show c.1331-6593_1331-6583delCACACACACAA	ITFG1	ENSG00000129636.13	transcript	ENST00000320640.11	protein_coding	12/17			chr16	TogoVar
ITFG1_chr16_47149391_47466063	47307093	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	1	110	0.0091	-11	c.107 others(30): Show c.1070+4136_1070+4146delTTTTTTTTTTT	ITFG1	ENSG00000129636.13	transcript	ENST00000320640.11	protein_coding	10/17			chr16	TogoVar
ITFG1_chr16_47149391_47466063	47409404	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0071 a0001c0004t0001g0071	1	110	0.0091	-11	c.655 others(30): Show c.655+19389_655+19399delAAAAAAAAAAA	ITFG1	ENSG00000129636.13	transcript	ENST00000320640.11	protein_coding	6/17			chr16	TogoVar
ITGA11_chr15_68291532_68437163	68362667	AATGGATG others(4): Show AATGGATGGAAG	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02922.hp2 HG03130.hp2 others(3): Show HG02280.hp2 HG02922.hp2 HG03130.hp2 HG03209.hp1 HG03486.hp1 NA18522.hp1	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0005 a0016 a0017	a0001c0034 a0002c0080 a0004c0075 others(3): Show a0001c0034 a0002c0080 a0004c0075 a0005c0072 a0016c0074 a0017c0073	a0001c0034t0009 a0002c0080t0001 a0004c0075t0034 others(3): Show a0001c0034t0009 a0002c0080t0001 a0004c0075t0034 a0005c0072t0087 a0016c0074t0047 a0017c0073t0061	a0001c0034t0009g0154 a0002c0080t0001g0228 a0004c0075t0034g0015 others(3): Show a0001c0034t0009g0154 a0002c0080t0001g0228 a0004c0075t0034g0015 a0005c0072t0087g0038 a0016c0074t0047g0021 a0017c0073t0061g0137	6	242	0.0248	-11	c.358 others(26): Show c.358-974_358-964delCTTCCATCCAT	ITGA11	ENSG00000137809.17	transcript	ENST00000315757.9	protein_coding	4/29			chr15	TogoVar
ITGA1_chr5_52782916_52964209	52812789	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp2 others(65): Show HG00099.hp1 HG00140.hp1 HG00280.hp2 HG00408.hp2 HG00609.hp1 HG00642.hp2 HG01069.hp2 HG01074.hp2 HG01106.hp2 HG01167.hp2 HG01243.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01975.hp1 HG02071.hp2 HG02080.hp1 HG02155.hp1 HG02165.hp1 HG02280.hp2 HG02451.hp2 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02683.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp2 HG02965.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03491.hp2 HG03492.hp1 HG03654.hp2 HG03834.hp2 HG04184.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18944.hp2 NA18948.hp2 NA18956.hp1 NA18969.hp2 NA18982.hp2 NA18983.hp1 NA18987.hp1 NA18988.hp2 NA18998.hp2 NA18999.hp2 NA19003.hp2 NA19007.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19063.hp1 NA19065.hp2 NA19066.hp1 NA19081.hp1 NA19083.hp1 NA19240.hp2 NA20129.hp1 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0017 a0002c0006 a0002c0007 a0002c0009 a0002c0013 a0003c0005 a0003c0008 a0003c0014	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(41): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0032 a0001c0001t0038 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0065 a0001c0001t0077 a0001c0001t0087 a0001c0001t0097 a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0010 a0001c0002t0014 a0001c0002t0030 a0001c0002t0036 a0001c0002t0063 a0001c0002t0094 a0001c0003t0001 a0001c0003t0004 a0001c0003t0006 a0001c0003t0007 a0001c0003t0066 a0001c0004t0005 a0001c0004t0007 a0001c0004t0031 a0001c0017t0092 a0002c0006t0002 a0002c0006t0019 a0002c0006t0035 a0002c0007t0002 a0002c0009t0002 a0002c0009t0034 a0002c0013t0072 a0003c0005t0001 a0003c0005t0003 a0003c0005t0024 a0003c0008t0003 a0003c0014t0003	a0001c0001t0001g0197 a0001c0001t0001g0214 a0001c0001t0001g0221 others(64): Show a0001c0001t0001g0197 a0001c0001t0001g0214 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0005g0206 a0001c0001t0006g0236 a0001c0001t0032g0237 a0001c0001t0038g0003 a0001c0001t0060g0174 a0001c0001t0061g0178 a0001c0001t0062g0225 a0001c0001t0065g0218 a0001c0001t0077g0173 a0001c0001t0087g0242 a0001c0001t0097g0176 a0001c0002t0001g0233 a0001c0002t0003g0170 a0001c0002t0003g0235 a0001c0002t0004g0193 a0001c0002t0004g0204 a0001c0002t0004g0205 a0001c0002t0004g0210 a0001c0002t0005g0190 a0001c0002t0007g0199 a0001c0002t0010g0228 a0001c0002t0010g0230 a0001c0002t0014g0179 a0001c0002t0030g0189 a0001c0002t0036g0234 a0001c0002t0063g0091 a0001c0002t0094g0217 a0001c0003t0001g0180 a0001c0003t0001g0183 a0001c0003t0001g0207 a0001c0003t0001g0208 a0001c0003t0001g0209 a0001c0003t0001g0226 a0001c0003t0004g0239 a0001c0003t0006g0200 a0001c0003t0007g0184 a0001c0003t0066g0215 a0001c0004t0005g0181 a0001c0004t0005g0185 a0001c0004t0005g0186 a0001c0004t0005g0224 a0001c0004t0005g0227 a0001c0004t0007g0201 a0001c0004t0031g0202 a0001c0017t0092g0191 a0002c0006t0002g0177 a0002c0006t0002g0240 a0002c0006t0019g0213 a0002c0006t0035g0222 a0002c0007t0002g0211 a0002c0009t0002g0212 a0002c0009t0034g0188 a0002c0013t0072g0013 a0003c0005t0001g0194 a0003c0005t0001g0220 a0003c0005t0003g0192 a0003c0005t0003g0203 a0003c0005t0003g0219 a0003c0005t0003g0229 a0003c0005t0003g0241 a0003c0005t0024g0182 a0003c0008t0003g0216 a0003c0014t0003g0198	68	322	0.2112	-11	c.61+ others(28): Show c.61+24393_61+24403delTTTTTTTTTTT	ITGA1	ENSG00000213949.10	transcript	ENST00000282588.7	protein_coding	1/28		INFO_REALIGN_3_PRIME	chr5	TogoVar
ITGA1_chr5_52782916_52964209	52911079	AGTATATA others(4): Show AGTATATATAGT	A A	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01884.hp1 HG02451.hp1 others(8): Show HG01167.hp1 HG01884.hp1 HG02451.hp1 HG02559.hp2 HG02622.hp1 HG02683.hp2 HG02895.hp1 HG02922.hp2 HG03130.hp1 HG03139.hp1 HG03486.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0006 others(1): Show a0001c0001 a0001c0002 a0002c0006 a0002c0010	a0001c0001t0005 a0001c0001t0009 a0001c0001t0052 others(7): Show a0001c0001t0005 a0001c0001t0009 a0001c0001t0052 a0001c0001t0058 a0001c0001t0085 a0001c0002t0047 a0001c0002t0059 a0001c0002t0075 a0002c0006t0002 a0002c0010t0002	a0001c0001t0005g0134 a0001c0001t0009g0246 a0001c0001t0052g0317 others(8): Show a0001c0001t0005g0134 a0001c0001t0009g0246 a0001c0001t0052g0317 a0001c0001t0058g0021 a0001c0001t0085g0129 a0001c0002t0047g0247 a0001c0002t0059g0016 a0001c0002t0075g0029 a0002c0006t0002g0019 a0002c0006t0002g0177 a0002c0010t0002g0084	11	322	0.0342	-11	c.185 others(28): Show c.1857+683_1857+693delGTATATATAGT	ITGA1	ENSG00000213949.10	transcript	ENST00000282588.7	protein_coding	14/28		INFO_REALIGN_3_PRIME	chr5	TogoVar
ITGA2B_chr17_44367181_44394649	44368142	ATATATTT others(4): Show ATATATTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 NA21309.hp1 HG02257.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0161 a0001c0001t0001g0015 a0001c0001t0001g0161	2	354	0.0057	-11	c.42 others(22): Show c.4211_*4221delAAAAAAATATA	ITGA2B	ENSG00000005961.19	transcript	ENST00000262407.6	protein_coding		4038		chr17	TogoVar
ITGA2_chr5_52984352_53099779	52986968	GAGGGACA others(4): Show GAGGGACACGGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18946.hp2 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0269 a0001c0001t0001g0269	1	398	0.0025	-11	c.-25 others(22): Show c.-2500_-2490delAGGGACACGGA	ITGA2	ENSG00000164171.11	transcript	ENST00000296585.10	protein_coding		2383		chr5	TogoVar
ITGA2_chr5_52984352_53099779	53004894	GTTTTTTT others(4): Show GTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG03098.hp2 HG03130.hp1 others(3): Show HG02897.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 NA19011.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0008 a0001c0001 a0001c0004 a0001c0008	a0001c0001t0001 a0001c0004t0008 a0001c0008t0012 a0001c0001t0001 a0001c0004t0008 a0001c0008t0012	a0001c0001t0001g0094 a0001c0001t0001g0224 a0001c0004t0008g0313 others(3): Show a0001c0001t0001g0094 a0001c0001t0001g0224 a0001c0004t0008g0313 a0001c0004t0008g0319 a0001c0008t0012g0162 a0001c0008t0012g0163	6	398	0.0151	-11	c.64+ others(28): Show c.64+15391_64+15401delTTTTTTTTTTT	ITGA2	ENSG00000164171.11	transcript	ENST00000296585.10	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr5	TogoVar
ITGA2_chr5_52984352_53099779	53044274	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02630.hp1 HG02647.hp2 HG02615.hp1 HG02630.hp1 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0021 a0001c0001 a0001c0002 a0001c0021	a0001c0001t0025 a0001c0002t0004 a0001c0021t0050 a0001c0001t0025 a0001c0002t0004 a0001c0021t0050	a0001c0001t0025g0281 a0001c0002t0004g0247 a0001c0021t0050g0280 a0001c0001t0025g0281 a0001c0002t0004g0247 a0001c0021t0050g0280	3	398	0.0075	-11	c.296 others(26): Show c.296-705_296-695delAAAAAAAAAAA	ITGA2	ENSG00000164171.11	transcript	ENST00000296585.10	protein_coding	3/29		INFO_REALIGN_3_PRIME	chr5	TogoVar
ITGA3_chr17_50051110_50095481	50084230	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0004 a0001c0011t0004	a0001c0011t0004g0193 a0001c0011t0004g0193	1	402	0.0025	-11	c.291 others(30): Show c.2919+2838_2919+2848delAAAAAAAAAAA	ITGA3	ENSG00000005884.18	transcript	ENST00000320031.13	protein_coding	23/25		INFO_REALIGN_3_PRIME	chr17	TogoVar
ITGA6_chr2_172422586_172511459	172431274	GCAGAATC others(4): Show GCAGAATCTTAA	G G	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG03098.hp2 HG02895.hp1 HG02897.hp1 HG03098.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0002c0004t0007 a0001c0001t0001 a0002c0004t0007	a0001c0001t0001g0306 a0001c0001t0001g0307 a0002c0004t0007g0338 a0001c0001t0001g0306 a0001c0001t0001g0307 a0002c0004t0007g0338	3	352	0.0085	-11	c.182 others(28): Show c.182+3311_182+3321delCTTAACAGAAT	ITGA6	ENSG00000091409.16	transcript	ENST00000442250.6	protein_coding	1/25		INFO_REALIGN_3_PRIME	chr2	TogoVar

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