Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CBX1_chr17_48065059_48106478	48080942	AAAAAAAA others(4): Show AAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0282 a0001c0001t0001g0282	1	396	0.0025	-11	c.-37 others(28): Show c.-37-3912_-37-3902delATTTTTTTTTT	CBX1	ENSG00000108468.15	transcript	ENST00000225603.9	protein_coding	1/4			chr17	TogoVar
CBX1_chr17_48065059_48106478	48080946	AAAAAAAT others(4): Show AAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA19068.hp1 NA18955.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0372 a0001c0001t0003g0306 a0001c0001t0001g0372 a0001c0001t0003g0306	2	396	0.0051	-11	c.-37 others(28): Show c.-37-3916_-37-3906delATATATTTTTT	CBX1	ENSG00000108468.15	transcript	ENST00000225603.9	protein_coding	1/4			chr17	TogoVar
CBX1_chr17_48065059_48106478	48080948	AAAAATAT others(4): Show AAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0128 a0001c0001t0003g0128	1	396	0.0025	-11	c.-37 others(28): Show c.-37-3918_-37-3908delATATATATTTT	CBX1	ENSG00000108468.15	transcript	ENST00000225603.9	protein_coding	1/4			chr17	TogoVar
CBX1_chr17_48065059_48106478	48080950	AAATATAT others(4): Show AAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0352 a0001c0001t0008g0352	1	396	0.0025	-11	c.-37 others(28): Show c.-37-3920_-37-3910delATATATATATT	CBX1	ENSG00000108468.15	transcript	ENST00000225603.9	protein_coding	1/4			chr17	TogoVar
CBX1_chr17_48065059_48106478	48080952	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG03130.hp1 NA18956.hp2 others(1): Show HG01255.hp1 HG03130.hp1 NA18956.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0012 a0001c0001t0002 a0001c0001t0003 a0001c0001t0012	a0001c0001t0002g0062 a0001c0001t0003g0198 a0001c0001t0003g0297 others(1): Show a0001c0001t0002g0062 a0001c0001t0003g0198 a0001c0001t0003g0297 a0001c0001t0012g0160	4	396	0.0101	-11	c.-37 others(28): Show c.-37-3922_-37-3912delATATATATATA	CBX1	ENSG00000108468.15	transcript	ENST00000225603.9	protein_coding	1/4			chr17	TogoVar
CBX1_chr17_48065059_48106478	48093079	AAAAAAAA others(4): Show AAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00323.hp2 others(17): Show HG00099.hp1 HG00140.hp2 HG00323.hp2 HG00642.hp2 HG00733.hp1 HG01074.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01516.hp1 HG01981.hp2 HG02602.hp1 HG03017.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp1 NA18975.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0327 a0001c0001t0004g0328 a0001c0001t0004g0329 others(17): Show a0001c0001t0004g0327 a0001c0001t0004g0328 a0001c0001t0004g0329 a0001c0001t0004g0330 a0001c0001t0004g0331 a0001c0001t0004g0332 a0001c0001t0004g0333 a0001c0001t0004g0334 a0001c0001t0004g0335 a0001c0001t0004g0336 a0001c0001t0004g0337 a0001c0001t0004g0338 a0001c0001t0004g0339 a0001c0001t0004g0340 a0001c0001t0004g0341 a0001c0001t0004g0343 a0001c0001t0004g0344 a0001c0001t0004g0345 a0001c0001t0004g0348 a0001c0001t0004g0349	20	396	0.0505	-11	c.-38 others(28): Show c.-38+8178_-38+8188delCTTTTTTTTTT	CBX1	ENSG00000108468.15	transcript	ENST00000225603.9	protein_coding	1/4			chr17	TogoVar
CBX3_chr7_26196745_26218607	26208917	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0066 a0001c0001t0031g0066	1	410	0.0024	-11	c.330 others(26): Show c.330+386_330+396delTTTTTTTTTTT	CBX3	ENSG00000122565.19	transcript	ENST00000396386.7	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CBX5_chr12_54225942_54285122	54250811	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp2 HG03688.hp2 HG01515.hp1 HG01517.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0296 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0296	3	368	0.0082	-11	c.324 others(28): Show c.324+1219_324+1229delTTTTTTTTTTT	CBX5	ENSG00000094916.16	transcript	ENST00000209875.9	protein_coding	3/4			chr12	TogoVar
CBY1_chr22_38651638_38678850	38672306	TTTTTATT others(4): Show TTTTTATTTTTA	T T	intron_variant intron_variant	MODIFIER	NA19086.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0170 a0001c0001t0007g0170	1	384	0.0026	-11	c.304 others(26): Show c.304-848_304-838delATTTTTATTTT	CBY1	ENSG00000100211.12	transcript	ENST00000216029.8	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
CBY1_chr22_38651638_38678850	38674839	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0006 a0001c0001t0003g0006	1	384	0.0026	-11	c.16 others(22): Show c.1604_*1614delAAAAAAAAAAA	CBY1	ENSG00000100211.12	transcript	ENST00000216029.8	protein_coding		990		chr22	TogoVar
CBY3_chr5_179673560_179686034	179677967	TTAAAAAA others(4): Show TTAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02818.hp1 HG03540.hp1 others(1): Show HG01884.hp2 HG02818.hp1 HG03540.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0007t0001g0028 a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0007t0001g0028	4	412	0.0097	-11	c.60 others(20): Show c.605_*615delTTTTTTTTTTA	CBY3	ENSG00000204659.5	transcript	ENST00000376974.5	protein_coding		592		chr5	TogoVar
CC2D1A_chr19_13901201_13935879	13925926	AAAAAAAA others(4): Show AAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02486.hp2 HG03471.hp2 others(1): Show HG02257.hp1 HG02486.hp2 HG03471.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0011 a0001c0001 a0001c0011	a0001c0001t0001 a0001c0011t0001 a0001c0001t0001 a0001c0011t0001	a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0011t0001g0154 others(1): Show a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0011t0001g0154 a0001c0011t0001g0155	4	370	0.0108	-11	c.194 others(28): Show c.1941-589_1941-579delAAAAAAATATA	CC2D1A	ENSG00000132024.18	transcript	ENST00000318003.11	protein_coding	17/28		INFO_REALIGN_3_PRIME	chr19	TogoVar
CC2D1A_chr19_13901201_13935879	13925932	AAATATAT others(4): Show AAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02970.hp2 HG02055.hp1 HG02970.hp2	a0001 a0004 a0001 a0004	a0001c0006 a0004c0005 a0001c0006 a0004c0005	a0001c0006t0001 a0004c0005t0001 a0001c0006t0001 a0004c0005t0001	a0001c0006t0001g0140 a0004c0005t0001g0073 a0001c0006t0001g0140 a0004c0005t0001g0073	2	370	0.0054	-11	c.194 others(28): Show c.1941-583_1941-573delATATATATATA	CC2D1A	ENSG00000132024.18	transcript	ENST00000318003.11	protein_coding	17/28		INFO_REALIGN_3_PRIME	chr19	TogoVar
CC2D1B_chr1_52345597_52371205	52368405	GTTGTGTG others(4): Show GTTGTGTGAATT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02615.hp2 HG02723.hp1 others(3): Show HG02055.hp2 HG02615.hp2 HG02723.hp1 HG02895.hp1 HG02897.hp2 HG03041.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0006 a0001c0004t0011 a0001c0004t0002 a0001c0004t0006 a0001c0004t0011	a0001c0004t0002g0023 a0001c0004t0006g0024 a0001c0004t0006g0062 others(1): Show a0001c0004t0002g0023 a0001c0004t0006g0024 a0001c0004t0006g0062 a0001c0004t0011g0063	6	322	0.0186	-11	c.-23 others(22): Show c.-2362_-2352delAATTCACACAA	CC2D1B	ENSG00000154222.15	transcript	ENST00000284376.8	protein_coding		2201		chr1	TogoVar
CC2D2A_chr4_15464882_15606552	15583456	AACTGTTA others(4): Show AACTGTTAGAAC	A A	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18953.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0233 a0001c0002t0002g0233	1	344	0.0029	-11	c.397 others(30): Show c.3976-2700_3976-2690delACTGTTAGAAC	CC2D2A	ENSG00000048342.18	transcript	ENST00000424120.6	protein_coding	30/36			chr4	TogoVar
CC2D2B_chr10_95902975_96038745	95947113	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0011 a0011	a0011c0032 a0011c0032	a0011c0032t0001 a0011c0032t0001	a0011c0032t0001g0017 a0011c0032t0001g0017	1	312	0.0032	-11	c.802 others(28): Show c.802-2776_802-2766delTTTTTTTTTTT	CC2D2B	ENSG00000188649.16	transcript	ENST00000646931.3	protein_coding	9/34		INFO_REALIGN_3_PRIME	chr10	TogoVar
CC2D2B_chr10_95902975_96038745	96025173	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp2 HG01175.hp1 HG01175.hp2	a0001 a0003 a0001 a0003	a0001c0007 a0003c0003 a0001c0007 a0003c0003	a0001c0007t0004 a0003c0003t0004 a0001c0007t0004 a0003c0003t0004	a0001c0007t0004g0299 a0003c0003t0004g0058 a0001c0007t0004g0299 a0003c0003t0004g0058	2	312	0.0064	-11	c.394 others(28): Show c.3947+263_3947+273delTATATATATAT	CC2D2B	ENSG00000188649.16	transcript	ENST00000646931.3	protein_coding	33/34			chr10	TogoVar
CCAR1_chr10_68716239_68797377	68760106	ACAGGCAC others(4): Show ACAGGCACGAGC	A A	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG01069.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	2	360	0.0056	-11	c.192 others(28): Show c.1921-898_1921-888delGGCACGAGCCA	CCAR1	ENSG00000060339.14	transcript	ENST00000265872.11	protein_coding	15/24		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCAR2_chr8_22599757_22625471	22602304	GGACACAA others(4): Show GGACACAAGGTA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp2 HG01256.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0193 a0001c0003t0006g0193	1	376	0.0027	-11	c.-25 others(22): Show c.-2576_-2566delGACACAAGGTA	CCAR2	ENSG00000158941.17	transcript	ENST00000308511.9	protein_coding		2452		chr8	TogoVar
CCAR2_chr8_22599757_22625471	22613355	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0062 a0001c0002t0008g0062	1	376	0.0027	-11	c.704 others(26): Show c.704+230_704+240delTTTTTTTTTTT	CCAR2	ENSG00000158941.17	transcript	ENST00000308511.9	protein_coding	8/20		INFO_REALIGN_3_PRIME	chr8	TogoVar
CCBE1_chr18_59425939_59702423	59550998	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA18972.hp1 NA18994.hp1 HG03486.hp1 NA18972.hp1 NA18994.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0057 a0001c0001t0001 a0001c0001t0005 a0001c0001t0057	a0001c0001t0001g0233 a0001c0001t0005g0220 a0001c0001t0057g0152 a0001c0001t0001g0233 a0001c0001t0005g0220 a0001c0001t0057g0152	3	242	0.0124	-11	c.213 others(30): Show c.213-70771_213-70761delTTTTTTTTTTT	CCBE1	ENSG00000183287.15	transcript	ENST00000439986.9	protein_coding	2/10			chr18	TogoVar
CCBE1_chr18_59425939_59702423	59559025	TGATGAGG others(4): Show TGATGAGGATGG	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02300.hp2 HG02451.hp2 others(10): Show HG02145.hp1 HG02300.hp2 HG02451.hp2 HG02572.hp2 HG02622.hp2 HG02895.hp2 HG02970.hp2 HG03017.hp2 HG03130.hp2 HG03195.hp2 HG03453.hp2 HG04184.hp2 NA20905.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0001c0001t0017 a0001c0001t0022 a0001c0001t0028 a0001c0001t0063 a0004c0005t0025	a0001c0001t0001g0144 a0001c0001t0002g0174 a0001c0001t0002g0230 others(10): Show a0001c0001t0001g0144 a0001c0001t0002g0174 a0001c0001t0002g0230 a0001c0001t0003g0218 a0001c0001t0009g0127 a0001c0001t0010g0170 a0001c0001t0014g0123 a0001c0001t0017g0163 a0001c0001t0022g0165 a0001c0001t0022g0166 a0001c0001t0028g0011 a0001c0001t0063g0120 a0004c0005t0025g0034	13	242	0.0537	-11	c.213 others(30): Show c.213-78798_213-78788delCCATCCTCATC	CCBE1	ENSG00000183287.15	transcript	ENST00000439986.9	protein_coding	2/10			chr18	TogoVar
CCBE1_chr18_59425939_59702423	59601010	GTTTTTTT others(4): Show GTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02970.hp1 HG02976.hp2 HG02630.hp1 HG02970.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0009 a0001c0001t0068 a0001c0001t0006 a0001c0001t0009 a0001c0001t0068	a0001c0001t0006g0130 a0001c0001t0009g0177 a0001c0001t0068g0008 a0001c0001t0006g0130 a0001c0001t0009g0177 a0001c0001t0068g0008	3	242	0.0124	-11	c.212 others(30): Show c.212+95608_212+95618delAAAAAAAAAAA	CCBE1	ENSG00000183287.15	transcript	ENST00000439986.9	protein_coding	2/10			chr18	TogoVar
CCBE1_chr18_59425939_59702423	59612825	TGTTTTTT others(4): Show TGTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02055.hp2 NA18957.hp2 HG01109.hp1 HG02055.hp2 NA18957.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0011 a0001c0001t0002 a0001c0001t0007 a0001c0001t0011	a0001c0001t0002g0078 a0001c0001t0007g0126 a0001c0001t0011g0229 a0001c0001t0002g0078 a0001c0001t0007g0126 a0001c0001t0011g0229	3	242	0.0124	-11	c.212 others(30): Show c.212+83793_212+83803delCAAAAAAAAAC	CCBE1	ENSG00000183287.15	transcript	ENST00000439986.9	protein_coding	2/10			chr18	TogoVar
CCBE1_chr18_59425939_59702423	59613863	GTTTTTTT others(4): Show GTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03704.hp1 HG04204.hp1 others(4): Show HG03688.hp2 HG03704.hp1 HG04204.hp1 NA18612.hp2 NA18950.hp1 NA18984.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0054 a0001c0003t0062	a0001c0001t0001g0013 a0001c0001t0001g0088 a0001c0001t0002g0075 others(4): Show a0001c0001t0001g0013 a0001c0001t0001g0088 a0001c0001t0002g0075 a0001c0001t0008g0066 a0001c0001t0008g0092 a0001c0001t0054g0089 a0001c0003t0062g0156	7	242	0.0289	-11	c.212 others(30): Show c.212+82755_212+82765delAAAAAAAAAAA	CCBE1	ENSG00000183287.15	transcript	ENST00000439986.9	protein_coding	2/10			chr18	TogoVar
CCBE1_chr18_59425939_59702423	59658351	AAAAATAT others(4): Show AAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0068 a0001c0001t0068	a0001c0001t0068g0008 a0001c0001t0068g0008	1	242	0.0041	-11	c.212 others(30): Show c.212+38267_212+38277delATATATATTTT	CCBE1	ENSG00000183287.15	transcript	ENST00000439986.9	protein_coding	2/10			chr18	TogoVar
CCBE1_chr18_59425939_59702423	59658355	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01169.hp2 HG03540.hp1 others(1): Show HG00099.hp1 HG01169.hp2 HG03540.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0064	a0001c0001t0001g0023 a0001c0001t0004g0104 a0001c0001t0006g0033 others(1): Show a0001c0001t0001g0023 a0001c0001t0004g0104 a0001c0001t0006g0033 a0001c0001t0064g0071	4	242	0.0165	-11	c.212 others(30): Show c.212+38263_212+38273delATATATATATA	CCBE1	ENSG00000183287.15	transcript	ENST00000439986.9	protein_coding	2/10			chr18	TogoVar
CCDC102A_chr16_57507181_57541571	57507922	AGGGAATA others(4): Show AGGGAATAGAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG02976.hp2 HG03130.hp1 others(4): Show HG02257.hp2 HG02976.hp2 HG03130.hp1 HG03209.hp2 HG03579.hp2 HG04204.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 others(1): Show a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0002t0002	a0001c0001t0007g0276 a0001c0001t0007g0277 a0001c0001t0008g0005 others(3): Show a0001c0001t0007g0276 a0001c0001t0007g0277 a0001c0001t0008g0005 a0001c0001t0010g0137 a0001c0001t0010g0138 a0001c0002t0002g0021	7	416	0.0168	-11	c.48 others(22): Show c.4808_*4818delATTCTATTCCC	CCDC102A	ENSG00000135736.6	transcript	ENST00000258214.3	protein_coding		4258		chr16	TogoVar
CCDC102B_chr18_68793080_69060189	68972391	AGGGAAAC others(4): Show AGGGAAACCTGT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01109.hp1 NA18961.hp2 others(8): Show HG00735.hp1 HG01109.hp1 NA18961.hp2 NA18988.hp1 NA19001.hp2 NA19007.hp1 NA19007.hp2 NA19054.hp2 NA19083.hp1 NA20752.hp2 NA20905.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0007 a0020	a0001c0001 a0001c0007 a0002c0005 others(4): Show a0001c0001 a0001c0007 a0002c0005 a0002c0031 a0003c0004 a0007c0012 a0020c0033	a0001c0001t0001 a0001c0007t0001 a0002c0005t0001 others(4): Show a0001c0001t0001 a0001c0007t0001 a0002c0005t0001 a0002c0031t0001 a0003c0004t0001 a0007c0012t0001 a0020c0033t0001	a0001c0001t0001g0185 a0001c0007t0001g0049 a0002c0005t0001g0028 others(8): Show a0001c0001t0001g0185 a0001c0007t0001g0049 a0002c0005t0001g0028 a0002c0005t0001g0041 a0002c0005t0001g0053 a0002c0005t0001g0191 a0002c0005t0001g0198 a0002c0031t0001g0119 a0003c0004t0001g0045 a0007c0012t0001g0210 a0020c0033t0001g0074	11	216	0.0509	-11	c.126 others(32): Show c.1264-38541_1264-38531delGGAAACCTGTG	CCDC102B	ENSG00000150636.17	transcript	ENST00000360242.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr18	TogoVar
CCDC102B_chr18_68793080_69060189	69040384	GGGTGTGT others(4): Show GGGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0077 a0003c0004t0001g0077	1	216	0.0046	-11	c.143 others(32): Show c.1435-13644_1435-13634delGTGTGTGTGTG	CCDC102B	ENSG00000150636.17	transcript	ENST00000360242.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr18	TogoVar
CCDC103_chr17_44894729_44910390	44908173	CTCTCATG others(4): Show CTCTCATGGACT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	426	0.0024	-11	c.53 others(22): Show c.5357_*5367delTCTCATGGACT	CCDC103	ENSG00000167131.17	transcript	ENST00000417826.3	protein_coding		2784		chr17	TogoVar
CCDC107_chr9_35653292_35666511	35663288	CTCCAGCC others(4): Show CTCCAGCCTGCG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	426	0.0024	-11	c.21 others(22): Show c.2102_*2112delTCCAGCCTGCG	CCDC107	ENSG00000159884.12	transcript	ENST00000426546.7	protein_coding		1778		chr9	TogoVar
CCDC110_chr4_185440182_185476733	185443921	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0015 a0001c0001t0002g0015	1	428	0.0023	-11	c.15 others(22): Show c.1570_*1580delAAAAAAAAAAA	CCDC110	ENSG00000168491.10	transcript	ENST00000307588.8	protein_coding		1260		chr4	TogoVar
CCDC112_chr5_115262190_115301654	115298253	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	388	0.0026	-11	c.-17 others(22): Show c.-1721_-1711delTTTTTTTTTTT	CCDC112	ENSG00000164221.13	transcript	ENST00000379611.10	protein_coding		1600		chr5	TogoVar
CCDC113_chr16_58244936_58288836	58266399	ATATATAT others(4): Show ATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0112 a0001c0001t0006g0112	1	378	0.0027	-11	c.784 others(28): Show c.784-1078_784-1068delATATATTTTTT	CCDC113	ENSG00000103021.10	transcript	ENST00000219299.8	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCDC113_chr16_58244936_58288836	58266401	ATATATTT others(4): Show ATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01099.hp1 HG01168.hp2 others(21): Show HG00323.hp2 HG01099.hp1 HG01168.hp2 HG01943.hp2 HG01993.hp2 HG02083.hp1 HG02145.hp1 HG02257.hp1 HG02293.hp1 HG02698.hp2 HG02886.hp2 HG02976.hp1 HG03139.hp2 HG03710.hp2 NA18965.hp1 NA18968.hp2 NA18975.hp2 NA18988.hp2 NA18994.hp1 NA18999.hp1 NA19005.hp1 NA19010.hp1 NA19067.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011	a0001c0001t0001g0016 a0001c0001t0001g0038 a0001c0001t0001g0057 others(19): Show a0001c0001t0001g0016 a0001c0001t0001g0038 a0001c0001t0001g0057 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0088 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0006g0058 a0001c0001t0006g0066 a0001c0001t0006g0067 a0001c0001t0006g0068 a0001c0001t0006g0230 a0001c0001t0010g0070 a0001c0001t0010g0071 a0001c0001t0010g0091 a0001c0001t0011g0009 a0001c0001t0011g0168 a0001c0001t0011g0183	24	378	0.0635	-11	c.784 others(28): Show c.784-1076_784-1066delATATTTTTTTT	CCDC113	ENSG00000103021.10	transcript	ENST00000219299.8	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCDC113_chr16_58244936_58288836	58266403	ATATTTTT others(4): Show ATATTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01256.hp1 HG01433.hp2 others(17): Show HG00099.hp2 HG01256.hp1 HG01433.hp2 HG02015.hp2 HG02132.hp2 HG02135.hp2 HG02622.hp1 HG03098.hp2 HG03453.hp2 HG03540.hp2 HG04199.hp2 HG04204.hp1 NA18522.hp1 NA18959.hp2 NA18966.hp1 NA19043.hp2 NA19060.hp1 NA19087.hp2 NA19090.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0009 a0001c0006t0001 a0001c0001t0001 a0001c0001t0009 a0001c0006t0001	a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0077 others(17): Show a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0104 a0001c0001t0001g0126 a0001c0001t0001g0137 a0001c0001t0001g0141 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0180 a0001c0001t0001g0216 a0001c0001t0001g0262 a0001c0001t0001g0339 a0001c0001t0001g0340 a0001c0001t0009g0044 a0001c0006t0001g0170	20	378	0.0529	-11	c.784 others(28): Show c.784-1074_784-1064delATTTTTTTTTT	CCDC113	ENSG00000103021.10	transcript	ENST00000219299.8	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCDC113_chr16_58244936_58288836	58266405	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01081.hp2 HG01106.hp1 others(3): Show HG00280.hp2 HG01081.hp2 HG01106.hp1 HG02965.hp2 HG03710.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0013 others(1): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0013 a0001c0001t0018	a0001c0001t0001g0154 a0001c0001t0008g0095 a0001c0001t0008g0102 others(3): Show a0001c0001t0001g0154 a0001c0001t0008g0095 a0001c0001t0008g0102 a0001c0001t0008g0241 a0001c0001t0013g0081 a0001c0001t0018g0097	6	378	0.0159	-11	c.784 others(28): Show c.784-1055_784-1045delTTTTTTTTTTT	CCDC113	ENSG00000103021.10	transcript	ENST00000219299.8	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCDC115_chr2_130332933_130347164	130333284	GTTTTTTT others(4): Show GTTTTTTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	384	0.0026	-11	c.58 others(22): Show c.5825_*5835delAAAAAAAAAAA	CCDC115	ENSG00000136710.10	transcript	ENST00000259229.7	protein_coding		4648		chr2	TogoVar
CCDC116_chr22_21627760_21642329	21630561	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01346.hp1 HG02280.hp1 HG02622.hp2 others(6): Show HG01346.hp1 HG02280.hp1 HG02622.hp2 HG02723.hp2 HG02809.hp1 HG02922.hp2 HG03225.hp2 NA19240.hp1 NA20300.hp1	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0001 a0008c0008t0001	a0008c0008t0001g0004 a0008c0008t0001g0011 a0008c0008t0001g0004 a0008c0008t0001g0011	9	394	0.0228	-11	c.-23 others(22): Show c.-2328_-2318delAAAAAAAAAAA	CCDC116	ENSG00000161180.11	transcript	ENST00000292779.4	protein_coding		2198		chr22	TogoVar
CCDC117_chr22_28767695_28794295	28768226	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	1	418	0.0024	-11	c.-46 others(22): Show c.-4623_-4613delAAAAAAAAAAA	CCDC117	ENSG00000159873.10	transcript	ENST00000249064.9	protein_coding		4468		chr22	TogoVar
CCDC117_chr22_28767695_28794295	28768250	AAAAAAAA others(4): Show AAAAAAAAAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0070 a0001c0001t0003g0070	1	418	0.0024	-11	c.-45 others(22): Show c.-4599_-4589delAAAAAAAAAAT	CCDC117	ENSG00000159873.10	transcript	ENST00000249064.9	protein_coding		4444		chr22	TogoVar
CCDC117_chr22_28767695_28794295	28768256	AAAAATAT others(4): Show AAAAATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	418	0.0024	-11	c.-45 others(22): Show c.-4593_-4583delAAAATATATAT	CCDC117	ENSG00000159873.10	transcript	ENST00000249064.9	protein_coding		4438		chr22	TogoVar
CCDC120_chrX_49053999_49074854	49072266	TGTTCCCA others(4): Show TGTTCCCAGAAG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	287	0.0035	-11	c.36 others(22): Show c.3609_*3619delGTTCCCAGAAG	CCDC120	ENSG00000147144.13	transcript	ENST00000603986.6	protein_coding		2413		chrX	TogoVar
CCDC125_chr5_69275175_69337801	69286223	TATATATA others(4): Show TATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0270 a0001c0001t0005g0270	1	341	0.0029	-11	c.110 others(28): Show c.1100-767_1100-757delTATATATATAT	CCDC125	ENSG00000183323.13	transcript	ENST00000396496.7	protein_coding	10/11			chr5	TogoVar
CCDC126_chr7_23592382_23649708	23607690	ATTGTTTC others(4): Show ATTGTTTCCTCT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	380	0.0026	-11	c.-14 others(30): Show c.-145-3479_-145-3469delTGTTTCCTCTT	CCDC126	ENSG00000169193.12	transcript	ENST00000307471.8	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CCDC12_chr3_46916730_46981745	46975526	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01167.hp2 HG01169.hp1 others(26): Show HG01109.hp1 HG01167.hp2 HG01169.hp1 HG01891.hp2 HG02109.hp2 HG02280.hp1 HG02559.hp2 HG02572.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG03041.hp1 HG03130.hp2 HG03139.hp2 HG03225.hp1 HG03486.hp1 HG03540.hp2 HG03579.hp1 HG06807.hp2 NA18522.hp1 NA19043.hp2 NA19240.hp1 NA20300.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 others(26): Show a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0327 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0335 a0001c0001t0001g0336 a0001c0001t0001g0337 a0001c0001t0001g0338 a0001c0001t0001g0339 a0001c0001t0001g0340 a0001c0001t0001g0341 a0001c0001t0001g0342 a0001c0001t0001g0343 a0001c0001t0001g0344	29	354	0.0819	-11	c.96+ others(26): Show c.96+1100_96+1110delAAAAAAAAAAA	CCDC12	ENSG00000160799.12	transcript	ENST00000683445.1	protein_coding	1/6			chr3	TogoVar
CCDC134_chr22_41795679_41837164	41835309	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0229 a0001c0001t0004g0229	1	380	0.0026	-11	c.94 others(22): Show c.9487_*9497delTTTTTTTTTTT	CCDC134	ENSG00000100147.14	transcript	ENST00000255784.6	protein_coding		3146		chr22	TogoVar
CCDC141_chr2_178824757_179055137	178860543	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02523.hp2 HG02559.hp1 HG01952.hp1 HG02523.hp2 HG02559.hp1	a0001 a0001	a0001c0007 a0001c0033 a0001c0007 a0001c0033	a0001c0007t0020 a0001c0033t0052 a0001c0007t0020 a0001c0033t0052	a0001c0007t0020g0078 a0001c0007t0020g0080 a0001c0033t0052g0081 a0001c0007t0020g0078 a0001c0007t0020g0080 a0001c0033t0052g0081	3	274	0.0110	-11	c.272 others(30): Show c.2725-4157_2725-4147delAAAAAAAAAAA	CCDC141	ENSG00000163492.16	transcript	ENST00000443758.7	protein_coding	17/23			chr2	TogoVar
CCDC141_chr2_178824757_179055137	178941958	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00642.hp1 HG00733.hp1 others(26): Show HG00544.hp2 HG00642.hp1 HG00733.hp1 HG00741.hp1 HG01099.hp1 HG01261.hp1 HG01346.hp1 HG01496.hp2 HG01928.hp2 HG02004.hp2 HG02109.hp1 HG02155.hp2 HG02258.hp1 HG02273.hp2 HG02698.hp1 HG02896.hp1 HG02896.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03490.hp1 HG03710.hp2 NA18612.hp1 NA18951.hp1 NA18979.hp1 NA19011.hp1 NA19058.hp2 NA19079.hp2 NA19088.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0016 a0019 a0021 a0024	a0001c0001 a0002c0003 a0003c0004 others(5): Show a0001c0001 a0002c0003 a0003c0004 a0005c0013 a0016c0031 a0019c0035 a0021c0039 a0024c0045	a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 others(16): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0001c0001t0056 a0001c0001t0062 a0002c0003t0002 a0002c0003t0013 a0002c0003t0014 a0002c0003t0026 a0003c0004t0004 a0003c0004t0023 a0003c0004t0046 a0005c0013t0041 a0016c0031t0061 a0019c0035t0060 a0021c0039t0021 a0024c0045t0006	a0001c0001t0001g0038 a0001c0001t0005g0009 a0001c0001t0010g0044 others(26): Show a0001c0001t0001g0038 a0001c0001t0005g0009 a0001c0001t0010g0044 a0001c0001t0011g0121 a0001c0001t0014g0105 a0001c0001t0056g0109 a0001c0001t0062g0092 a0002c0003t0002g0226 a0002c0003t0013g0251 a0002c0003t0014g0228 a0002c0003t0026g0249 a0003c0004t0004g0019 a0003c0004t0004g0020 a0003c0004t0004g0021 a0003c0004t0004g0022 a0003c0004t0004g0025 a0003c0004t0004g0090 a0003c0004t0004g0093 a0003c0004t0004g0125 a0003c0004t0004g0144 a0003c0004t0004g0200 a0003c0004t0023g0088 a0003c0004t0023g0145 a0003c0004t0046g0027 a0005c0013t0041g0031 a0016c0031t0061g0104 a0019c0035t0060g0190 a0021c0039t0021g0054 a0024c0045t0006g0247	29	274	0.1058	-11	c.897 others(28): Show c.897+2566_897+2576delTTTTTTTTTTT	CCDC141	ENSG00000163492.16	transcript	ENST00000443758.7	protein_coding	6/23			chr2	TogoVar

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