Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNOT6_chr5_180489379_180583358	180580426	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0073 a0001c0001t0002g0073	1	334	0.0030	-11	c.62 others(22): Show c.6227_*6237delAAAAAAAAAAA	CNOT6	ENSG00000113300.13	transcript	ENST00000261951.9	protein_coding		2069		chr5	TogoVar
CNOT6_chr5_180489379_180583358	180580442	AAAAAAAA others(4): Show AAAAAAAAAAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01257.hp2 HG01258.hp2 HG01257.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0188 a0001c0001t0003g0189 a0001c0001t0003g0188 a0001c0001t0003g0189	2	334	0.0060	-11	c.62 others(22): Show c.6243_*6253delAAAAAAAAAAT	CNOT6	ENSG00000113300.13	transcript	ENST00000261951.9	protein_coding		2085		chr5	TogoVar
CNOT9_chr2_218563839_218602080	218595404	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0179 a0001c0001t0026g0179	1	322	0.0031	-11	c.11 others(22): Show c.1146_*1156delTTTTTTTTTTT	CNOT9	ENSG00000144580.15	transcript	ENST00000273064.11	protein_coding	8/8	1146	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNPY2_chr12_56304844_56320988	56312222	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	1	372	0.0027	-11	c.205 others(26): Show c.205-819_205-809delAAAAAAAAAAA	CNPY2	ENSG00000257727.6	transcript	ENST00000273308.9	protein_coding	3/5			chr12	TogoVar
CNPY4_chr7_100114634_100130508	100121106	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0197 a0001c0001t0001g0197	1	416	0.0024	-11	c.119 others(28): Show c.119-1151_119-1141delATATATATATT	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNPY4_chr7_100114634_100130508	100121108	ATATATAT others(4): Show ATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03540.hp1 NA18949.hp2 others(2): Show HG03490.hp1 HG03540.hp1 NA18949.hp2 NA18991.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0192 a0001c0001t0001g0031 a0001c0001t0001g0192	5	416	0.0120	-11	c.119 others(28): Show c.119-1149_119-1139delATATATATTTT	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNPY4_chr7_100114634_100130508	100121110	ATATATAT others(4): Show ATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01256.hp1 HG02280.hp1 others(6): Show HG01167.hp1 HG01256.hp1 HG02280.hp1 NA18965.hp1 NA18967.hp1 NA18983.hp1 NA19060.hp1 NA19081.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0040 a0001c0001t0001g0188 others(1): Show a0001c0001t0001g0030 a0001c0001t0001g0040 a0001c0001t0001g0188 a0001c0001t0001g0189	9	416	0.0216	-11	c.119 others(28): Show c.119-1147_119-1137delATATATTTTTT	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNPY4_chr7_100114634_100130508	100121112	ATATATTT others(4): Show ATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG03834.hp2 NA18939.hp2 others(6): Show HG01934.hp1 HG03834.hp2 NA18939.hp2 NA18954.hp1 NA18977.hp2 NA19004.hp1 NA19056.hp1 NA19056.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0181 a0001c0001t0001g0182 others(1): Show a0001c0001t0001g0012 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0203	9	416	0.0216	-11	c.119 others(28): Show c.119-1145_119-1135delATATTTTTTTT	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNPY4_chr7_100114634_100130508	100121116	ATTTTTTT others(4): Show ATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp2 HG01928.hp2 others(3): Show HG01515.hp1 HG01517.hp2 HG01928.hp2 HG02056.hp2 HG02896.hp1 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0062 a0001c0001t0001g0140 others(1): Show a0001c0001t0001g0049 a0001c0001t0001g0062 a0001c0001t0001g0140 a0001c0001t0001g0141	6	416	0.0144	-11	c.119 others(28): Show c.119-1119_119-1109delTTTTTTTTTTT	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNR2_chr1_23865515_23918362	23884219	ACAGGCAC others(4): Show ACAGGCACCTGC	A A	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0055 a0003c0003t0055	a0003c0003t0055g0191 a0003c0003t0055g0191	1	268	0.0037	-11	c.-45 others(28): Show c.-45-8568_-45-8558delGCAGGTGCCTG	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding	1/1			chr1	TogoVar
CNR2_chr1_23865515_23918362	23896361	CCTCATCC others(4): Show CCTCATCCATAA	C C	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0126 a0001c0001t0003g0126	1	268	0.0037	-11	c.-46 others(30): Show c.-46+16874_-46+16884delTTATGGATGAG	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding	1/1			chr1	TogoVar
CNRIP1_chr2_68288010_68324949	68297567	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG02602.hp2 HG01981.hp1 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0158 a0001c0002t0001g0336 a0001c0001t0001g0158 a0001c0002t0001g0336	2	424	0.0047	-11	c.331 others(28): Show c.331-3552_331-3542delTTTTTTTTTTT	CNRIP1	ENSG00000119865.9	transcript	ENST00000263655.4	protein_coding	2/2			chr2	TogoVar
CNST_chr1_246561456_246673595	246585661	AAATATAC others(4): Show AAATATACACAC	A A	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp1 HG02258.hp1 others(5): Show HG01515.hp1 HG01517.hp1 HG02258.hp1 HG02615.hp2 HG02886.hp2 HG03195.hp2 HG06807.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0170 others(5): Show a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0170 a0001c0001t0001g0271 a0001c0001t0002g0172 a0001c0001t0002g0175 a0001c0001t0004g0007 a0001c0001t0004g0173	8	320	0.0250	-11	c.-51 others(28): Show c.-51-5849_-51-5839delATATACACACA	CNST	ENSG00000162852.14	transcript	ENST00000366513.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
CNST_chr1_246561456_246673595	246608165	AAATAAAT others(4): Show AAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0004 a0001c0001t0004g0004	1	320	0.0031	-11	c.380 others(30): Show c.380-13249_380-13239delAAATAAATAAT	CNST	ENSG00000162852.14	transcript	ENST00000366513.9	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
CNTD1_chr17_42793861_42816587	42801511	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0235 a0002c0002t0001g0235	1	306	0.0033	-11	c.170 others(28): Show c.170-2108_170-2098delTATATATATAT	CNTD1	ENSG00000176563.10	transcript	ENST00000588408.6	protein_coding	1/6			chr17	TogoVar
CNTD1_chr17_42793861_42816587	42801533	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG04199.hp1 HG02055.hp1 HG04199.hp1	a0002 a0002	a0002c0002 a0002c0006 a0002c0002 a0002c0006	a0002c0002t0001 a0002c0006t0001 a0002c0002t0001 a0002c0006t0001	a0002c0002t0001g0051 a0002c0006t0001g0048 a0002c0002t0001g0051 a0002c0006t0001g0048	2	306	0.0065	-11	c.170 others(28): Show c.170-2086_170-2076delTATATATATAT	CNTD1	ENSG00000176563.10	transcript	ENST00000588408.6	protein_coding	1/6			chr17	TogoVar
CNTLN_chr9_17130040_17508923	17299241	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0027 a0027	a0027c0051 a0027c0051	a0027c0051t0013 a0027c0051t0013	a0027c0051t0013g0047 a0027c0051t0013g0047	1	218	0.0046	-11	c.114 others(28): Show c.1146+905_1146+915delAAAAAAAAAAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	7/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17352406	ATATATAT others(4): Show ATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0021 a0021	a0021c0054 a0021c0054	a0021c0054t0002 a0021c0054t0002	a0021c0054t0002g0016 a0021c0054t0002g0016	1	218	0.0046	-11	c.188 others(30): Show c.1886+9964_1886+9974delATATATATATT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17352408	ATATATAT others(4): Show ATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01433.hp2 HG02602.hp1 HG00140.hp2 HG01433.hp2 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0029 a0001c0001 a0001c0029	a0001c0001t0001 a0001c0001t0007 a0001c0029t0001 a0001c0001t0001 a0001c0001t0007 a0001c0029t0001	a0001c0001t0001g0156 a0001c0001t0007g0166 a0001c0029t0001g0197 a0001c0001t0001g0156 a0001c0001t0007g0166 a0001c0029t0001g0197	3	218	0.0138	-11	c.188 others(30): Show c.1886+9966_1886+9976delATATATATTTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17408128	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02572.hp1 NA19240.hp1 HG00735.hp1 HG02572.hp1 NA19240.hp1	a0001 a0001	a0001c0026 a0001c0027 a0001c0028 a0001c0026 a0001c0027 a0001c0028	a0001c0026t0001 a0001c0027t0004 a0001c0028t0004 a0001c0026t0001 a0001c0027t0004 a0001c0028t0004	a0001c0026t0001g0143 a0001c0027t0004g0155 a0001c0028t0004g0028 a0001c0026t0001g0143 a0001c0027t0004g0155 a0001c0028t0004g0028	3	218	0.0138	-11	c.261 others(30): Show c.2616-1151_2616-1141delAAAAAAAAAAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	15/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17455890	CCTTATTA others(4): Show CCTTATTATCCA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02109.hp1 HG01109.hp1 HG02109.hp1	a0013 a0013	a0013c0019 a0013c0019	a0013c0019t0002 a0013c0019t0002	a0013c0019t0002g0119 a0013c0019t0002g0120 a0013c0019t0002g0119 a0013c0019t0002g0120	2	218	0.0092	-11	c.311 others(30): Show c.3115-1632_3115-1622delTTATTATCCAC	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	18/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTN1_chr12_40687439_41077415	40755190	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG02071.hp2 HG04115.hp1 HG01517.hp2 HG02071.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0016 a0001c0002t0001g0022 a0001c0002t0001g0028 a0001c0001t0002g0016 a0001c0002t0001g0022 a0001c0002t0001g0028	3	230	0.0130	-11	c.-77 others(30): Show c.-77+62624_-77+62634delAAAAAAAAAAA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40795309	ACACACAC others(4): Show ACACACACACAT	A A	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0195 a0001c0002t0001g0195	1	230	0.0044	-11	c.-77 others(32): Show c.-77+102718_-77+102728delCACACACACAT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	40951714	TTAAAAAA others(4): Show TTAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0104 a0001c0003t0005g0104	1	230	0.0044	-11	c.168 others(30): Show c.1684-7399_1684-7389delTAAAAAAAAAA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	14/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	41007045	GTTTTTTT others(4): Show GTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01099.hp1 HG00642.hp1 HG01099.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0071 a0001c0003t0005g0072 a0001c0003t0005g0071 a0001c0003t0005g0072	2	230	0.0087	-11	c.211 others(30): Show c.2114-7161_2114-7151delTTTTTTTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	17/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN2_chr1_205038212_205083289	205048949	GTGTGTGT others(4): Show GTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0168 a0003c0003t0001g0168	1	380	0.0026	-11	c.-86 others(28): Show c.-86-4149_-86-4139delGTGTGTGTGTT	CNTN2	ENSG00000184144.12	transcript	ENST00000331830.7	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr1	TogoVar
CNTN3_chr3_74257568_74619659	74285737	ACAAATGC others(4): Show ACAAATGCTGAG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00438.hp2 HG00597.hp1 others(82): Show HG00408.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG01081.hp2 HG01167.hp1 HG01169.hp2 HG01257.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01884.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG02004.hp1 HG02015.hp1 HG02027.hp2 HG02080.hp2 HG02129.hp2 HG02132.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02559.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02735.hp1 HG02809.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03710.hp1 HG04184.hp1 HG04184.hp2 HG06807.hp2 NA18906.hp1 NA18945.hp1 NA18951.hp1 NA18951.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp2 NA18981.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19030.hp2 NA19043.hp2 NA19065.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19085.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20752.hp1 NA20905.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0007 a0010 a0011 a0012	a0001c0001 a0001c0002 a0001c0006 others(15): Show a0001c0001 a0001c0002 a0001c0006 a0001c0008 a0001c0009 a0001c0010 a0001c0018 a0002c0004 a0002c0005 a0003c0003 a0003c0007 a0003c0021 a0003c0026 a0005c0022 a0007c0025 a0010c0013 a0011c0020 a0012c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(49): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0014 a0001c0002t0019 a0001c0002t0020 a0001c0002t0021 a0001c0002t0025 a0001c0002t0030 a0001c0006t0001 a0001c0006t0006 a0001c0008t0002 a0001c0008t0015 a0001c0009t0002 a0001c0009t0004 a0001c0010t0003 a0001c0010t0005 a0001c0018t0001 a0002c0004t0001 a0002c0004t0006 a0002c0005t0001 a0002c0005t0002 a0002c0005t0004 a0002c0005t0005 a0003c0003t0002 a0003c0003t0005 a0003c0003t0007 a0003c0003t0012 a0003c0007t0002 a0003c0007t0004 a0003c0007t0007 a0003c0021t0003 a0003c0026t0010 a0005c0022t0002 a0007c0025t0029 a0010c0013t0003 a0011c0020t0003 a0012c0012t0003	a0001c0001t0001g0099 a0001c0001t0001g0109 a0001c0001t0001g0111 others(82): Show a0001c0001t0001g0099 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0118 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0002g0082 a0001c0001t0003g0024 a0001c0001t0003g0039 a0001c0001t0003g0060 a0001c0001t0003g0067 a0001c0001t0004g0090 a0001c0001t0004g0092 a0001c0001t0004g0098 a0001c0001t0005g0154 a0001c0001t0005g0156 a0001c0001t0006g0149 a0001c0001t0008g0001 a0001c0001t0008g0003 a0001c0001t0009g0084 a0001c0001t0009g0086 a0001c0001t0015g0014 a0001c0001t0017g0171 a0001c0001t0018g0173 a0001c0002t0001g0091 a0001c0002t0001g0097 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0116 a0001c0002t0001g0120 a0001c0002t0001g0128 a0001c0002t0001g0129 a0001c0002t0002g0056 a0001c0002t0002g0070 a0001c0002t0003g0047 a0001c0002t0003g0063 a0001c0002t0004g0105 a0001c0002t0004g0119 a0001c0002t0005g0146 a0001c0002t0005g0147 a0001c0002t0005g0152 a0001c0002t0005g0166 a0001c0002t0007g0018 a0001c0002t0014g0076 a0001c0002t0019g0002 a0001c0002t0020g0007 a0001c0002t0021g0010 a0001c0002t0025g0087 a0001c0002t0030g0172 a0001c0006t0001g0142 a0001c0006t0006g0150 a0001c0006t0006g0159 a0001c0006t0006g0168 a0001c0008t0002g0068 a0001c0008t0015g0030 a0001c0009t0002g0031 a0001c0009t0004g0103 a0001c0010t0003g0025 a0001c0010t0005g0163 a0001c0018t0001g0126 a0002c0004t0001g0101 a0002c0004t0006g0157 a0002c0005t0001g0127 a0002c0005t0002g0043 a0002c0005t0004g0121 a0002c0005t0005g0148 a0003c0003t0002g0052 a0003c0003t0002g0078 a0003c0003t0005g0161 a0003c0003t0007g0020 a0003c0003t0012g0012 a0003c0007t0002g0041 a0003c0007t0004g0131 a0003c0007t0007g0073 a0003c0021t0003g0048 a0003c0026t0010g0005 a0005c0022t0002g0053 a0007c0025t0029g0125 a0010c0013t0003g0027 a0011c0020t0003g0026 a0012c0012t0003g0050	85	174	0.4885	-11	c.251 others(28): Show c.2518-257_2518-247delCTCAGCATTTG	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	19/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74327105	CCTTTTTT others(4): Show CCTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02145.hp1 HG02258.hp2 others(6): Show HG02109.hp1 HG02145.hp1 HG02258.hp2 HG02615.hp1 HG03139.hp1 HG03225.hp2 HG06807.hp1 NA19240.hp2 NA20300.hp2	a0001 a0003 a0009 a0001 a0003 a0009	a0001c0001 a0001c0002 a0003c0003 others(2): Show a0001c0001 a0001c0002 a0003c0003 a0003c0023 a0009c0017	a0001c0001t0002 a0001c0001t0004 a0001c0001t0027 others(6): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0027 a0001c0002t0009 a0001c0002t0010 a0003c0003t0002 a0003c0003t0007 a0003c0023t0016 a0009c0017t0001	a0001c0001t0002g0072 a0001c0001t0004g0138 a0001c0001t0027g0094 others(6): Show a0001c0001t0002g0072 a0001c0001t0004g0138 a0001c0001t0027g0094 a0001c0002t0009g0085 a0001c0002t0010g0004 a0003c0003t0002g0081 a0003c0003t0007g0034 a0003c0023t0016g0096 a0009c0017t0001g0115	9	174	0.0517	-11	c.166 others(30): Show c.1668+7619_1668+7629delAAAAAAAAAAG	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	13/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74551710	TTTAGTAT others(4): Show TTTAGTATGTAG	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp1 HG00597.hp2 others(34): Show HG00438.hp2 HG00597.hp1 HG00597.hp2 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01169.hp1 HG01255.hp1 HG01255.hp2 HG02027.hp1 HG02080.hp1 HG02083.hp2 HG02132.hp2 HG02486.hp1 HG03225.hp2 HG04199.hp1 HG06807.hp1 NA18951.hp2 NA18955.hp1 NA18959.hp2 NA18961.hp1 NA18981.hp2 NA18998.hp2 NA19000.hp1 NA19043.hp2 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19077.hp1 NA19085.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0002 a0001c0006 others(6): Show a0001c0001 a0001c0002 a0001c0006 a0001c0010 a0002c0004 a0002c0005 a0003c0003 a0003c0023 a0006c0024	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0027 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0002t0017 a0001c0006t0006 a0001c0010t0005 a0002c0004t0004 a0002c0004t0006 a0002c0005t0002 a0002c0005t0003 a0002c0005t0005 a0002c0005t0006 a0003c0003t0005 a0003c0023t0016 a0006c0024t0002	a0001c0001t0001g0108 a0001c0001t0001g0139 a0001c0001t0002g0062 others(34): Show a0001c0001t0001g0108 a0001c0001t0001g0139 a0001c0001t0002g0062 a0001c0001t0003g0029 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0004g0090 a0001c0001t0005g0154 a0001c0001t0005g0156 a0001c0001t0006g0149 a0001c0001t0006g0153 a0001c0001t0027g0094 a0001c0002t0002g0015 a0001c0002t0002g0056 a0001c0002t0002g0065 a0001c0002t0003g0058 a0001c0002t0003g0063 a0001c0002t0005g0146 a0001c0002t0005g0147 a0001c0002t0005g0152 a0001c0002t0005g0164 a0001c0002t0007g0064 a0001c0002t0017g0170 a0001c0006t0006g0150 a0001c0010t0005g0163 a0002c0004t0004g0088 a0002c0004t0006g0145 a0002c0004t0006g0151 a0002c0004t0006g0157 a0002c0004t0006g0165 a0002c0005t0002g0066 a0002c0005t0003g0059 a0002c0005t0005g0148 a0002c0005t0006g0160 a0003c0003t0005g0161 a0003c0023t0016g0096 a0006c0024t0002g0054	37	174	0.2126	-11	c.-80 others(30): Show c.-80-30529_-80-30519delCTACATACTAA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	1/22			chr3	TogoVar
CNTN4_chr3_2093866_3062959	2244224	ATGTAAAT others(4): Show ATGTAAATGTGG	A A	intron_variant intron_variant	MODIFIER	HG03540.hp2 NA19043.hp2 HG03540.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0007 a0001c0001t0002 a0001c0002t0007	a0001c0001t0002g0086 a0001c0002t0007g0087 a0001c0001t0002g0086 a0001c0002t0007g0087	2	116	0.0172	-11	c.-14 others(32): Show c.-144-94952_-144-94942delGTAAATGTGGT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2253124	CAATTGAA others(4): Show CAATTGAATTGA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00642.hp1 others(10): Show HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00738.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01978.hp1 HG02165.hp2 HG02486.hp2 HG02523.hp2 HG03239.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0007 a0001c0003t0002 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0007c0018t0003	a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 others(10): Show a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 a0001c0002t0007g0112 a0001c0003t0002g0061 a0001c0003t0011g0113 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0044 a0001c0005t0001g0096 a0007c0018t0003g0062	13	116	0.1121	-11	c.-14 others(32): Show c.-144-86048_-144-86038delAATTGAAATTG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2520259	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0025 a0001c0025	a0001c0025t0001 a0001c0025t0001	a0001c0025t0001g0100 a0001c0025t0001g0100	1	116	0.0086	-11	c.-88 others(30): Show c.-88-51136_-88-51126delTTTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2529685	GCATAGGC others(4): Show GCATAGGCTAAA	G G	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02074.hp1 HG02132.hp2 others(13): Show HG01261.hp2 HG02074.hp1 HG02132.hp2 HG02523.hp2 HG02622.hp2 HG02647.hp2 HG02738.hp2 HG02897.hp2 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03831.hp2 HG03927.hp2 HG06807.hp2 NA20300.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0008	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0010 a0003c0008 a0004c0011 a0008c0026	a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 others(11): Show a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0012 a0001c0003t0002 a0001c0004t0002 a0001c0005t0006 a0001c0006t0004 a0001c0009t0004 a0001c0010t0003 a0003c0008t0001 a0004c0011t0003 a0008c0026t0017	a0001c0001t0003g0006 a0001c0002t0001g0027 a0001c0002t0001g0088 others(13): Show a0001c0001t0003g0006 a0001c0002t0001g0027 a0001c0002t0001g0088 a0001c0002t0002g0035 a0001c0002t0002g0078 a0001c0002t0003g0114 a0001c0002t0012g0013 a0001c0003t0002g0072 a0001c0004t0002g0076 a0001c0005t0006g0032 a0001c0006t0004g0004 a0001c0009t0004g0005 a0001c0010t0003g0011 a0003c0008t0001g0084 a0004c0011t0003g0111 a0008c0026t0017g0047	16	116	0.1379	-11	c.-88 others(30): Show c.-88-41729_-88-41719delATAGGCTAAAC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2575809	CTTTTTTT others(4): Show CTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0046 a0001c0003t0003g0046	1	116	0.0086	-11	c.55+ others(26): Show c.55+4269_55+4279delTTTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2600005	CTTCTTTT others(4): Show CTTCTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02622.hp2 HG02965.hp2 others(2): Show HG02572.hp1 HG02622.hp2 HG02965.hp2 HG03041.hp2 HG03130.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0005 a0002c0016 others(1): Show a0001c0002 a0001c0005 a0002c0016 a0003c0008	a0001c0002t0001 a0001c0005t0001 a0001c0005t0010 others(2): Show a0001c0002t0001 a0001c0005t0001 a0001c0005t0010 a0002c0016t0003 a0003c0008t0001	a0001c0002t0001g0110 a0001c0005t0001g0092 a0001c0005t0010g0001 others(2): Show a0001c0002t0001g0110 a0001c0005t0001g0092 a0001c0005t0010g0001 a0002c0016t0003g0079 a0003c0008t0001g0084	5	116	0.0431	-11	c.55+ others(28): Show c.55+28450_55+28460delCTTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2659478	AAAAAGAA others(4): Show AAAAAGAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02897.hp1 HG02165.hp1 HG02897.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0005 a0001c0004t0001 a0001c0002t0005 a0001c0004t0001	a0001c0002t0005g0002 a0001c0004t0001g0020 a0001c0002t0005g0002 a0001c0004t0001g0020	2	116	0.0172	-11	c.56- others(28): Show c.56-76734_56-76724delAAGAAGAAGAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2856282	ATAATGGG others(4): Show ATAATGGGCTGG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01243.hp1 HG01884.hp1 others(29): Show HG00738.hp2 HG01243.hp1 HG01884.hp1 HG01891.hp1 HG02257.hp2 HG02258.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG03654.hp1 NA18906.hp1 NA19043.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0003 others(14): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0010 a0001c0024 a0001c0025 a0002c0014 a0002c0015 a0002c0016 a0002c0017 a0003c0008 a0003c0019 a0007c0018	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(21): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0002t0001 a0001c0002t0003 a0001c0002t0007 a0001c0003t0002 a0001c0003t0003 a0001c0004t0006 a0001c0005t0001 a0001c0005t0006 a0001c0006t0002 a0001c0007t0003 a0001c0010t0003 a0001c0024t0015 a0001c0025t0001 a0002c0014t0001 a0002c0015t0003 a0002c0016t0003 a0002c0017t0008 a0003c0008t0013 a0003c0019t0002 a0007c0018t0003	a0001c0001t0001g0033 a0001c0001t0001g0059 a0001c0001t0003g0006 others(29): Show a0001c0001t0001g0033 a0001c0001t0001g0059 a0001c0001t0003g0006 a0001c0001t0003g0008 a0001c0001t0003g0095 a0001c0001t0005g0054 a0001c0001t0008g0053 a0001c0001t0008g0089 a0001c0002t0001g0027 a0001c0002t0001g0029 a0001c0002t0001g0108 a0001c0002t0001g0110 a0001c0002t0003g0024 a0001c0002t0007g0009 a0001c0002t0007g0080 a0001c0003t0002g0072 a0001c0003t0003g0015 a0001c0004t0006g0068 a0001c0005t0001g0092 a0001c0005t0006g0032 a0001c0006t0002g0060 a0001c0007t0003g0034 a0001c0010t0003g0011 a0001c0024t0015g0057 a0001c0025t0001g0100 a0002c0014t0001g0016 a0002c0015t0003g0103 a0002c0016t0003g0079 a0002c0017t0008g0067 a0003c0008t0013g0109 a0003c0019t0002g0031 a0007c0018t0003g0062	32	116	0.2759	-11	c.455 others(30): Show c.455-10468_455-10458delAATGGGCTGGT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2983213	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02486.hp1 HG02615.hp2 others(3): Show HG00438.hp2 HG02486.hp1 HG02615.hp2 HG02683.hp1 HG03471.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0020	a0001c0001t0003 a0001c0001t0004 a0001c0002t0002 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0002t0002 a0001c0005t0010 a0001c0020t0002	a0001c0001t0003g0008 a0001c0001t0003g0101 a0001c0001t0004g0042 others(3): Show a0001c0001t0003g0008 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0002t0002g0063 a0001c0005t0010g0085 a0001c0020t0002g0082	6	116	0.0517	-11	c.135 others(30): Show c.1359-5100_1359-5090delAAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3043212	CCCAAGTT others(4): Show CCCAAGTTTATT	C C	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0098 a0001c0001t0005g0098	1	116	0.0086	-11	c.269 others(26): Show c.2698+52_2698+62delAAGTTTATTCC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	22/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99462350	CTTTTCTT others(4): Show CTTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 NA19000.hp2 HG01169.hp1 NA19000.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0009 a0004c0004t0002 a0001c0001t0009 a0004c0004t0002	a0001c0001t0009g0043 a0004c0004t0002g0001 a0001c0001t0009g0043 a0004c0004t0002g0001	2	66	0.0303	-11	c.-70 others(30): Show c.-70-93790_-70-93780delCTTTTCTTTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99650002	TAATCTAC others(4): Show TAATCTACCTGA	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0022 a0002c0002t0022	a0002c0002t0022g0013 a0002c0002t0022g0013	1	66	0.0152	-11	c.55+ others(28): Show c.55+93737_55+93747delCTACCTGAAAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99945484	CTGTGCGT others(4): Show CTGTGCGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01496.hp2 HG01934.hp1 others(1): Show HG01169.hp1 HG01496.hp2 HG01934.hp1 HG02132.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0009 a0001c0001t0012 a0004c0004t0002 a0001c0001t0009 a0001c0001t0012 a0004c0004t0002	a0001c0001t0009g0043 a0001c0001t0012g0018 a0001c0001t0012g0030 others(1): Show a0001c0001t0009g0043 a0001c0001t0012g0018 a0001c0001t0012g0030 a0004c0004t0002g0051	4	66	0.0606	-11	c.674 others(30): Show c.674-11321_674-11311delTGTGCGTGTGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	100110195	AAAAAAGA others(4): Show AAAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0023 a0001c0001t0010g0023	1	66	0.0152	-11	c.158 others(32): Show c.1580+35914_1580+35924delAAAAGAAAAGA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100113417	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02258.hp1 HG03041.hp1 HG00738.hp2 HG02258.hp1 HG03041.hp1	a0004 a0009 a0010 a0004 a0009 a0010	a0004c0004 a0009c0012 a0010c0010 a0004c0004 a0009c0012 a0010c0010	a0004c0004t0002 a0009c0012t0008 a0010c0010t0011 a0004c0004t0002 a0009c0012t0008 a0010c0010t0011	a0004c0004t0002g0041 a0009c0012t0008g0026 a0010c0010t0011g0009 a0004c0004t0002g0041 a0009c0012t0008g0026 a0010c0010t0011g0009	3	66	0.0455	-11	c.158 others(32): Show c.1580+39149_1580+39159delAAAAAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100113443	AAAAAAAA others(4): Show AAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02258.hp2 HG03471.hp2 HG01243.hp2 HG02258.hp2 HG03471.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0004 a0001c0001t0005 a0005c0005t0003 a0001c0001t0004 a0001c0001t0005 a0005c0005t0003	a0001c0001t0004g0029 a0001c0001t0005g0014 a0005c0005t0003g0045 a0001c0001t0004g0029 a0001c0001t0005g0014 a0005c0005t0003g0045	3	66	0.0455	-11	c.158 others(32): Show c.1580+39152_1580+39162delAAAAAAAACAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100131106	CACGGGAG others(4): Show CACGGGAGTTAT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01081.hp1 HG01099.hp2 others(8): Show HG00738.hp1 HG01081.hp1 HG01099.hp2 HG01123.hp1 HG02109.hp1 HG02109.hp2 HG02895.hp1 HG02965.hp2 HG03041.hp2 NA18522.hp1 NA19043.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0005 a0001c0001 a0002c0002 a0005c0005	a0001c0001t0003 a0001c0001t0010 a0002c0002t0003 others(5): Show a0001c0001t0003 a0001c0001t0010 a0002c0002t0003 a0002c0002t0004 a0002c0002t0005 a0002c0002t0008 a0005c0005t0010 a0005c0005t0018	a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 others(8): Show a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 a0001c0001t0010g0023 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0005g0015 a0002c0002t0008g0019 a0005c0005t0010g0006 a0005c0005t0018g0028	11	66	0.1667	-11	c.158 others(32): Show c.1580+56813_1580+56823delACGGGAGTTAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24			chr11	TogoVar
CNTN6_chr3_1088024_1409217	1101525	GTCATCAA others(4): Show GTCATCAAACTC	G G	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	232	0.0043	-11	c.-83 others(28): Show c.-83+8409_-83+8419delTCAAACTCTCA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1170236	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00423.hp1 HG00423.hp2 others(104): Show HG00140.hp2 HG00423.hp1 HG00423.hp2 HG00609.hp1 HG00639.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01167.hp2 HG01169.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp2 HG01361.hp2 HG01515.hp2 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02074.hp2 HG02109.hp1 HG02145.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp2 HG02738.hp1 HG02738.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03453.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03710.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 NA18522.hp2 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18949.hp2 NA18951.hp2 NA18961.hp2 NA18972.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA19000.hp2 NA19002.hp1 NA19003.hp2 NA19009.hp2 NA19030.hp1 NA19084.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0007	a0001c0001 a0001c0002 a0001c0003 others(16): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0009 a0001c0010 a0001c0012 a0001c0019 a0001c0020 a0001c0025 a0002c0011 a0002c0014 a0004c0016 a0006c0027 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0009 a0001c0003t0001 a0001c0004t0001 a0001c0005t0001 a0001c0006t0001 a0001c0006t0002 a0001c0007t0001 a0001c0008t0001 a0001c0009t0001 a0001c0009t0003 a0001c0010t0001 a0001c0012t0001 a0001c0019t0001 a0001c0020t0001 a0001c0025t0001 a0002c0011t0001 a0002c0014t0001 a0004c0016t0001 a0006c0027t0001 a0007c0018t0001	a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0027 others(104): Show a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0067 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0141 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0171 a0001c0001t0001g0190 a0001c0001t0001g0198 a0001c0001t0001g0204 a0001c0001t0002g0124 a0001c0002t0001g0139 a0001c0002t0001g0147 a0001c0002t0001g0209 a0001c0002t0001g0227 a0001c0002t0002g0021 a0001c0002t0004g0228 a0001c0002t0009g0205 a0001c0003t0001g0011 a0001c0003t0001g0025 a0001c0003t0001g0026 a0001c0003t0001g0030 a0001c0003t0001g0031 a0001c0003t0001g0042 a0001c0003t0001g0074 a0001c0003t0001g0076 a0001c0003t0001g0077 a0001c0003t0001g0092 a0001c0003t0001g0118 a0001c0003t0001g0140 a0001c0003t0001g0142 a0001c0003t0001g0144 a0001c0003t0001g0154 a0001c0003t0001g0168 a0001c0003t0001g0172 a0001c0003t0001g0175 a0001c0003t0001g0177 a0001c0003t0001g0219 a0001c0003t0001g0224 a0001c0003t0001g0225 a0001c0003t0001g0226 a0001c0004t0001g0055 a0001c0004t0001g0073 a0001c0004t0001g0090 a0001c0005t0001g0164 a0001c0005t0001g0180 a0001c0005t0001g0182 a0001c0005t0001g0188 a0001c0005t0001g0215 a0001c0005t0001g0230 a0001c0006t0001g0036 a0001c0006t0001g0162 a0001c0006t0001g0183 a0001c0006t0001g0187 a0001c0006t0001g0200 a0001c0006t0001g0201 a0001c0006t0001g0223 a0001c0006t0001g0229 a0001c0006t0002g0178 a0001c0007t0001g0001 a0001c0007t0001g0014 a0001c0007t0001g0015 a0001c0007t0001g0017 a0001c0007t0001g0048 a0001c0007t0001g0052 a0001c0007t0001g0100 a0001c0007t0001g0133 a0001c0007t0001g0134 a0001c0007t0001g0135 a0001c0007t0001g0146 a0001c0007t0001g0155 a0001c0008t0001g0143 a0001c0008t0001g0197 a0001c0008t0001g0211 a0001c0008t0001g0212 a0001c0008t0001g0214 a0001c0008t0001g0218 a0001c0009t0001g0150 a0001c0009t0003g0051 a0001c0010t0001g0056 a0001c0012t0001g0085 a0001c0019t0001g0202 a0001c0020t0001g0151 a0001c0025t0001g0192 a0002c0011t0001g0006 a0002c0014t0001g0220 a0002c0014t0001g0232 a0004c0016t0001g0002 a0004c0016t0001g0003 a0006c0027t0001g0191 a0007c0018t0001g0148	107	232	0.4612	-11	c.55+ others(28): Show c.55+22190_55+22200delAAAAAAAAAAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245236	ACACACAC others(4): Show ACACACACACAT	A A	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01258.hp1 HG02056.hp1 others(23): Show HG01256.hp2 HG01258.hp1 HG02056.hp1 HG02056.hp2 HG02523.hp2 HG02647.hp2 HG02698.hp2 HG02738.hp2 HG03239.hp1 HG03710.hp2 HG03927.hp1 HG04115.hp1 NA18612.hp1 NA18747.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18961.hp1 NA18969.hp1 NA18972.hp2 NA18980.hp2 NA19009.hp2 NA19030.hp1 NA19065.hp2 NA19084.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0007 a0001c0009	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(5): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0006t0001 a0001c0007t0001 a0001c0007t0006 a0001c0009t0001 a0001c0009t0003	a0001c0001t0001g0024 a0001c0001t0001g0033 a0001c0001t0001g0035 others(23): Show a0001c0001t0001g0024 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0057 a0001c0001t0001g0071 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0002t0001g0121 a0001c0002t0001g0136 a0001c0002t0001g0176 a0001c0003t0001g0076 a0001c0003t0001g0081 a0001c0003t0001g0112 a0001c0003t0001g0140 a0001c0003t0001g0144 a0001c0003t0001g0161 a0001c0003t0001g0166 a0001c0003t0001g0175 a0001c0003t0001g0226 a0001c0006t0001g0037 a0001c0007t0001g0014 a0001c0007t0001g0015 a0001c0007t0001g0048 a0001c0007t0006g0170 a0001c0009t0001g0150 a0001c0009t0003g0051	26	232	0.1121	-11	c.358 others(30): Show c.358+17244_358+17254delCACACACACAT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22			chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245284	TATATATA others(4): Show TATATATATAAC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01496.hp2 HG01515.hp1 others(1): Show HG00639.hp2 HG01496.hp2 HG01515.hp1 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0006 a0001c0001 a0001c0003 a0001c0006	a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 a0001c0001t0001 a0001c0003t0001 a0001c0006t0001	a0001c0001t0001g0126 a0001c0003t0001g0040 a0001c0006t0001g0028 others(1): Show a0001c0001t0001g0126 a0001c0003t0001g0040 a0001c0006t0001g0028 a0001c0006t0001g0195	4	232	0.0172	-11	c.358 others(30): Show c.358+17301_358+17311delACATATATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr3	TogoVar

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