Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
CCNI_chr4_77042155_77080989	77067790	TAAAAAAA others(5): Show TAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18975.hp2 NA18979.hp2 others(3): Show NA18522.hp1 NA18975.hp2 NA18979.hp2 NA18997.hp1 NA19058.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0025 a0001c0001t0001 a0001c0001t0008 a0001c0001t0025	a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 others(3): Show a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0008g0260 a0001c0001t0025g0096	6	388	0.0155	-12	c.-43 others(29): Show c.-43-1397_-43-1386delTTTTTTTTTTTT		CCNI	ENSG00000118816.11	transcript	ENST00000237654.9	protein_coding	1/6						chr4	TogoVar
CCNJL_chr5_160244083_160317564	160249765	AAAATAAA others(5): Show AAAATAAATAAAT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG01891.hp1 others(10): Show HG01167.hp2 HG01169.hp1 HG01891.hp1 HG02109.hp2 HG02145.hp1 HG02257.hp1 HG02258.hp1 HG02559.hp2 HG02976.hp1 HG03225.hp1 HG03486.hp2 NA18941.hp1 NA18983.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0003 a0006c0009 a0001c0001 a0001c0003 a0006c0009	a0001c0001t0016 a0001c0003t0009 a0001c0003t0018 others(1): Show a0001c0001t0016 a0001c0003t0009 a0001c0003t0018 a0006c0009t0043	a0001c0001t0016g0003 a0001c0003t0009g0019 a0001c0003t0009g0038 others(9): Show a0001c0001t0016g0003 a0001c0003t0009g0019 a0001c0003t0009g0038 a0001c0003t0009g0046 a0001c0003t0009g0047 a0001c0003t0009g0050 a0001c0003t0009g0200 a0001c0003t0009g0201 a0001c0003t0009g0261 a0001c0003t0018g0023 a0001c0003t0018g0052 a0006c0009t0043g0273	13	338	0.0385	-12	c.36 others(23): Show c.3601_*3612delATTTATTTATTT		CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	6/6				3601		chr5	TogoVar
CCNJL_chr5_160244083_160317564	160282998	TATATATA others(5): Show TATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02523.hp2 HG02630.hp1 HG02145.hp2 HG02523.hp2 HG02630.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0059 a0002c0002t0003g0264 a0002c0002t0003g0265 a0002c0002t0003g0059 a0002c0002t0003g0264 a0002c0002t0003g0265	3	338	0.0089	-12	c.67- others(27): Show c.67-2272_67-2261delGTATATATATAT		CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	2/5						chr5	TogoVar
CCNJL_chr5_160244083_160317564	160303716	GTGTGTGT others(5): Show GTGTGTGTGTGTC	G G	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03704.hp2 HG03017.hp1 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0048 a0001c0001t0007 a0001c0001t0048	a0001c0001t0007g0155 a0001c0001t0048g0322 a0001c0001t0007g0155 a0001c0001t0048g0322	2	338	0.0059	-12	c.66+ others(27): Show c.66+8130_66+8141delGACACACACACA		CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	2/5						chr5	TogoVar
CCNJL_chr5_160244083_160317564	160317222	TATGAGTC others(5): Show TATGAGTCGGCAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0214 a0001c0001t0036g0214	1	338	0.0030	-12	c.-49 others(23): Show c.-4920_-4909delCTGCCGACTCAT		CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding					4659		chr5	TogoVar
CCNL1_chr3_157142553_157165147	157145454	AAAAAAAA others(5): Show AAAAAAAAAAACC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	1	426	0.0024	-12	c.27 others(23): Show c.2775_*2786delGGTTTTTTTTTT		CCNL1	ENSG00000163660.12	transcript	ENST00000295926.8	protein_coding					2098		chr3	TogoVar
CCNL1_chr3_157142553_157165147	157159983	CCGTCGTG others(5): Show CCGTCGTGGTCGT	C C	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG02257.hp1 HG02257.hp1	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0001 a0002c0008t0001	a0002c0008t0001g0103 a0002c0008t0001g0103	1	426	0.0024	-12	c.100 others(19): Show c.100_111delACGACCACGACG	p.Thr others(11): Show p.Thr34_Thr37del	CCNL1	ENSG00000163660.12	transcript	ENST00000295926.8	protein_coding	1/11	164/2322	100/1581	34/526			chr3	TogoVar
CCNL2_chr1_1380711_1404335	1394752	GAAAAAAA others(5): Show GAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02622.hp2 HG02965.hp1 others(3): Show HG01123.hp1 HG02622.hp2 HG02965.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0183 others(1): Show a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0183 a0001c0001t0005g0182	6	370	0.0162	-12	c.594 others(27): Show c.594+630_594+641delTTTTTTTTTTTT		CCNL2	ENSG00000221978.13	transcript	ENST00000400809.8	protein_coding	4/10						chr1	TogoVar
CCNQ_chrX_153582925_153604139	153585894	GGGGAGGG others(5): Show GGGGAGGGAGGGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	302	0.0033	-12	c.24 others(23): Show c.2459_*2470delTCCCTCCCTCCC		CCNQ	ENSG00000262919.8	transcript	ENST00000576892.8	protein_coding					2030		chrX	TogoVar
CCNT1_chr12_48683458_48721707	48683711	CAAATAAA others(5): Show CAAATAAATAAAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG00738.hp1 HG01169.hp2 others(7): Show HG00639.hp2 HG00738.hp1 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01346.hp1 HG01433.hp2 HG02559.hp1 NA20300.hp2 NA20752.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0003t0003 a0001c0002t0002 a0001c0003t0003	a0001c0002t0002g0010 a0001c0002t0002g0027 a0001c0002t0002g0085 others(5): Show a0001c0002t0002g0010 a0001c0002t0002g0027 a0001c0002t0002g0085 a0001c0002t0002g0101 a0001c0002t0002g0102 a0001c0002t0002g0105 a0001c0002t0002g0106 a0001c0003t0003g0162	10	386	0.0259	-12	c.93 others(23): Show c.9310_*9321delATTTATTTATTT		CCNT1	ENSG00000129315.12	transcript	ENST00000261900.8	protein_coding					4746		chr12	TogoVar
CCNT1_chr12_48683458_48721707	48697847	AAAAAAAA others(5): Show AAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0003 a0001c0011t0003	a0001c0011t0003g0157 a0001c0011t0003g0157	1	386	0.0026	-12	c.542 others(27): Show c.542+279_542+290delATATTTTTTTTT		CCNT1	ENSG00000129315.12	transcript	ENST00000261900.8	protein_coding	6/8						chr12	TogoVar
CCNT1_chr12_48683458_48721707	48712583	AAAAAAAA others(5): Show AAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG02004.hp1 HG02486.hp1 others(4): Show HG01256.hp1 HG02004.hp1 HG02486.hp1 HG02897.hp2 HG02976.hp2 NA18942.hp2 NA19043.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0007 a0001c0001 a0007c0007	a0001c0001t0001 a0001c0001t0007 a0001c0001t0021 others(1): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0021 a0007c0007t0001	a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 others(4): Show a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0007g0170 a0001c0001t0021g0060 a0007c0007t0001g0041	7	386	0.0181	-12	c.243 others(29): Show c.243+1848_243+1859delATTTTTTTTTTT		CCNT1	ENSG00000129315.12	transcript	ENST00000261900.8	protein_coding	2/8						chr12	TogoVar
CCNYL1_chr2_207706640_207761174	207715379	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0176 a0001c0001t0001g0176	1	354	0.0028	-12	c.220 others(29): Show c.220+3274_220+3285delTTTTTTTTTTTT		CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207729259	CGCCCCCA others(5): Show CGCCCCCACCCCA	C C	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02818.hp1 HG03486.hp1 others(10): Show HG01256.hp2 HG02818.hp1 HG03486.hp1 HG03491.hp1 HG03492.hp2 HG03831.hp2 NA18945.hp1 NA18962.hp2 NA18973.hp2 NA18984.hp1 NA19000.hp2 NA19064.hp1 NA19085.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0003 a0003c0005 a0001c0001 a0002c0003 a0003c0005	a0001c0001t0001 a0002c0003t0001 a0003c0005t0001 a0001c0001t0001 a0002c0003t0001 a0003c0005t0001	a0001c0001t0001g0026 a0001c0001t0001g0036 a0001c0001t0001g0042 others(10): Show a0001c0001t0001g0026 a0001c0001t0001g0036 a0001c0001t0001g0042 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0058 a0001c0001t0001g0074 a0001c0001t0001g0094 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0108 a0002c0003t0001g0113 a0003c0005t0001g0033	13	354	0.0367	-12	c.330 others(29): Show c.330+2384_330+2395delGCCCCCACCCCA		CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding	3/9						chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207743806	TTTTTTGT others(5): Show TTTTTTGTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0145 a0001c0001t0002g0146	2	354	0.0057	-12	c.639 others(29): Show c.639+1481_639+1492delTGTTTTTGTTTT		CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding	7/9					INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNY_chr10_35331509_35577667	35343382	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02683.hp2 NA18945.hp2 HG02683.hp2 NA18945.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0001 a0001c0002t0003	a0001c0002t0001g0162 a0001c0002t0003g0161 a0001c0002t0001g0162 a0001c0002t0003g0161	2	296	0.0068	-12	c.154 others(29): Show c.154+6188_154+6199delTTTTTTTTTTTT		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35406201	TTTTATTT others(5): Show TTTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02572.hp1 HG02647.hp2 others(7): Show HG02258.hp2 HG02572.hp1 HG02647.hp2 HG02717.hp1 HG02818.hp2 HG02970.hp2 HG03453.hp1 NA18946.hp2 NA18984.hp1 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0010 a0001c0001t0002g0023 others(7): Show a0001c0001t0002g0003 a0001c0001t0002g0010 a0001c0001t0002g0023 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145	10	296	0.0338	-12	c.154 others(31): Show c.154+69026_154+69037delATTTATTTATTT		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35426105	GCACGCGC others(5): Show GCACGCGCACACA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02559.hp1 HG02723.hp2 others(6): Show HG01243.hp1 HG02559.hp1 HG02723.hp2 HG02818.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG03098.hp2 HG03516.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0008 a0001c0001t0009 a0001c0001t0023 others(1): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0023 a0003c0004t0009	a0001c0001t0008g0138 a0001c0001t0008g0139 a0001c0001t0008g0140 others(6): Show a0001c0001t0008g0138 a0001c0001t0008g0139 a0001c0001t0008g0140 a0001c0001t0008g0141 a0001c0001t0009g0142 a0001c0001t0023g0005 a0003c0004t0009g0135 a0003c0004t0009g0136 a0003c0004t0009g0137	9	296	0.0304	-12	c.155 others(31): Show c.155-57295_155-57284delGCGCACACACAC		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35426109	GCGCACAC others(5): Show GCGCACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0266 a0001c0001t0001g0266	1	296	0.0034	-12	c.155 others(31): Show c.155-57293_155-57282delGCACACACACAC		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35430336	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0001 a0001c0001t0018g0001	1	296	0.0034	-12	c.155 others(31): Show c.155-53054_155-53043delAAAAAAAAAAAA		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35431401	CCTCTCTC others(5): Show CCTCTCTCTCTCT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01167.hp1 HG01169.hp2 others(37): Show HG00741.hp1 HG01167.hp1 HG01169.hp2 HG01358.hp1 HG01891.hp2 HG01928.hp2 HG01993.hp2 HG02015.hp1 HG02080.hp1 HG02132.hp1 HG02135.hp2 HG02273.hp2 HG02451.hp2 HG02486.hp2 HG02622.hp1 HG02647.hp2 HG02896.hp1 HG02897.hp2 HG03540.hp2 HG03704.hp1 HG03831.hp2 HG04115.hp2 HG04184.hp2 NA18943.hp1 NA18946.hp2 NA18950.hp2 NA18954.hp1 NA18957.hp1 NA18959.hp2 NA18968.hp2 NA18977.hp1 NA18983.hp1 NA19010.hp2 NA19011.hp1 NA19065.hp1 NA19068.hp1 NA19074.hp2 NA19091.hp2 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(5): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0021 a0001c0002t0001 a0002c0003t0002	a0001c0001t0002g0023 a0001c0001t0002g0026 a0001c0001t0002g0030 others(37): Show a0001c0001t0002g0023 a0001c0001t0002g0026 a0001c0001t0002g0030 a0001c0001t0002g0032 a0001c0001t0002g0037 a0001c0001t0002g0043 a0001c0001t0002g0050 a0001c0001t0002g0064 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0076 a0001c0001t0002g0079 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0104 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0112 a0001c0001t0002g0117 a0001c0001t0002g0123 a0001c0001t0002g0129 a0001c0001t0005g0049 a0001c0001t0005g0063 a0001c0001t0005g0080 a0001c0001t0005g0081 a0001c0001t0005g0101 a0001c0001t0010g0007 a0001c0001t0011g0122 a0001c0001t0015g0024 a0001c0001t0021g0114 a0001c0002t0001g0155 a0001c0002t0001g0189 a0001c0002t0001g0244 a0002c0003t0002g0054 a0002c0003t0002g0071 a0002c0003t0002g0072 a0002c0003t0002g0095 a0002c0003t0002g0125	40	296	0.1351	-12	c.155 others(31): Show c.155-51957_155-51946delTCTCTCTCTCTC		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35482749	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01346.hp1 HG02027.hp1 others(14): Show HG01109.hp2 HG01346.hp1 HG02027.hp1 HG02572.hp1 HG02717.hp1 HG02735.hp2 HG02818.hp2 HG02970.hp2 HG03688.hp2 NA18946.hp2 NA18966.hp2 NA18977.hp1 NA18980.hp1 NA18984.hp1 NA18985.hp2 NA18993.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0017 a0001c0001t0002 a0001c0001t0017	a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0010 others(14): Show a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0010 a0001c0001t0002g0023 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0031 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0040 a0001c0001t0002g0104 a0001c0001t0002g0129 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0017g0282	17	296	0.0574	-12	c.155 others(27): Show c.155-614_155-603delGTGTGTGTGTGT		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35504625	TTTGTTGT others(5): Show TTTGTTGTTGTTG	T T	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0211 a0001c0002t0001g0211	1	296	0.0034	-12	c.264 others(29): Show c.264+3105_264+3116delGTTGTTGTTGTT		CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	3/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
CCP110_chr16_19518942_19558408	19520398	TAAAAAAA others(5): Show TAAAAAAAAAGAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0026 a0002c0001t0002g0026	1	386	0.0026	-12	c.-37 others(23): Show c.-3705_-3694delAAAAAAAAAGAA		CCP110	ENSG00000103540.17	transcript	ENST00000694978.1	protein_coding					3543		chr16	TogoVar
CCPG1_chr15_55350239_55413359	55406438	TTTTTTTT others(5): Show TTTTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	NA18999.hp1 NA18999.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0084 a0002c0004t0001g0084	1	354	0.0028	-12	c.-10 others(29): Show c.-10+1771_-10+1782delCAAAAAAAAAAA		CCPG1	ENSG00000260916.8	transcript	ENST00000442196.8	protein_coding	1/8						chr15	TogoVar
CCR3_chr3_46237460_46271706	46237960	AGAAATCA others(5): Show AGAAATCAAGATC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0152 a0001c0001t0001g0152	1	408	0.0025	-12	c.-45 others(23): Show c.-4589_-4578delGAAATCAAGATC		CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding					4499		chr3	TogoVar
CCR3_chr3_46237460_46271706	46268622	TAAACACA others(5): Show TAAACACAGACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0073 a0003c0004t0001g0073	1	408	0.0025	-12	c.23 others(23): Show c.2397_*2408delAAACACAGACAC		CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding					1917		chr3	TogoVar
CCR3_chr3_46237460_46271706	46268624	AACACAGA others(5): Show AACACAGACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG02109.hp2 HG02886.hp2 others(12): Show HG00639.hp1 HG02109.hp2 HG02886.hp2 HG02970.hp2 HG03453.hp1 HG03490.hp1 HG03492.hp1 HG03579.hp1 HG04204.hp2 NA18522.hp2 NA18747.hp1 NA18967.hp1 NA19000.hp1 NA19001.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0080 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0080 a0001c0002t0001g0018 a0001c0002t0001g0033 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0123	15	408	0.0368	-12	c.23 others(23): Show c.2399_*2410delACACAGACACAC		CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding					1919		chr3	TogoVar
CCR6_chr6_167118096_167144141	167133932	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0306 a0001c0001t0009g0306	1	460	0.0022	-12	c.-97 others(29): Show c.-97-2079_-97-2068delTATATATATATA		CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2					INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR9_chr3_45881543_45908174	45882797	CTATTATT others(5): Show CTATTATTATTAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01123.hp1 HG01255.hp2 HG01928.hp2 others(12): Show HG01123.hp1 HG01255.hp2 HG01928.hp2 HG01952.hp2 HG01978.hp1 HG01993.hp2 HG02148.hp2 HG02273.hp2 HG03041.hp2 NA18522.hp2 NA18612.hp2 NA18959.hp1 NA18963.hp2 NA19004.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0023 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0106 a0001c0001t0001g0122 a0001c0001t0001g0141 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0009g0002	15	424	0.0354	-12	c.-38 others(23): Show c.-3886_-3875delTATTATTATTAT		CCR9	ENSG00000173585.18	transcript	ENST00000357632.7	protein_coding					3745		chr3	TogoVar
CCRL2_chr3_46402259_46414523	46404317	CTCTCTCT others(5): Show CTCTCTCTCTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03704.hp1 NA18984.hp2 NA19080.hp2 others(1): Show HG03704.hp1 NA18984.hp2 NA19080.hp2 NA19084.hp2	a0004 a0006 a0004 a0006	a0004c0005 a0006c0008 a0004c0005 a0006c0008	a0004c0005t0001 a0006c0008t0001 a0004c0005t0001 a0006c0008t0001	a0004c0005t0001g0003 a0006c0008t0001g0003 a0004c0005t0001g0003 a0006c0008t0001g0003	4	416	0.0096	-12	c.-31 others(23): Show c.-3197_-3186delTCTCTCTCTCTT		CCRL2	ENSG00000121797.10	transcript	ENST00000399036.4	protein_coding					2941		chr3	TogoVar
CCSAP_chr1_229316015_229348047	229331787	TTTATTAT others(5): Show TTTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00738.hp1 HG01106.hp1 others(12): Show HG00642.hp1 HG00738.hp1 HG01106.hp1 HG01168.hp1 HG01175.hp1 HG01256.hp1 HG01258.hp2 HG01515.hp2 HG01516.hp1 HG01891.hp2 HG02602.hp2 HG02738.hp1 HG02976.hp2 NA20752.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0019 a0001c0001t0036 a0001c0001t0003 a0001c0001t0019 a0001c0001t0036	a0001c0001t0003g0126 a0001c0001t0003g0206 a0001c0001t0003g0207 others(12): Show a0001c0001t0003g0126 a0001c0001t0003g0206 a0001c0001t0003g0207 a0001c0001t0003g0247 a0001c0001t0003g0262 a0001c0001t0003g0286 a0001c0001t0003g0291 a0001c0001t0003g0296 a0001c0001t0003g0298 a0001c0001t0003g0299 a0001c0001t0003g0341 a0001c0001t0003g0364 a0001c0001t0003g0381 a0001c0001t0019g0297 a0001c0001t0036g0202	15	436	0.0344	-12	c.368 others(29): Show c.368-4793_368-4782delTAATAATAATAA		CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3						chr1	TogoVar
CCSAP_chr1_229316015_229348047	229338538	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA19083.hp2 NA19083.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0025 a0001c0002t0025	a0001c0002t0025g0107 a0001c0002t0025g0107	1	436	0.0023	-12	c.367 others(29): Show c.367+3549_367+3560delGTGTGTGTGTGT		CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3						chr1	TogoVar
CCSER1_chr4_90122394_91610295	90257560	GATACATA others(5): Show GATACATAGATAC	G G	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0027 a0001c0001t0002g0027	1	38	0.0263	-12	c.-41 others(31): Show c.-41-50680_-41-50669delCATAGATACATA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90276247	TTTCTTTC others(5): Show TTTCTTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG03130.hp2 HG01192.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0031 a0001c0001t0004g0005 a0001c0001t0003g0031 a0001c0001t0004g0005	2	38	0.0526	-12	c.-41 others(31): Show c.-41-31993_-41-31982delTTTCCTTCCTTC		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90276251	TTTCCTTC others(5): Show TTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03017.hp2 HG03139.hp1 others(1): Show HG01243.hp2 HG03017.hp2 HG03139.hp1 HG03239.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0002c0002 a0001c0001 a0001c0008 a0002c0002	a0001c0001t0001 a0001c0001t0020 a0001c0008t0019 others(1): Show a0001c0001t0001 a0001c0001t0020 a0001c0008t0019 a0002c0002t0017	a0001c0001t0001g0001 a0001c0001t0020g0033 a0001c0008t0019g0029 others(1): Show a0001c0001t0001g0001 a0001c0001t0020g0033 a0001c0008t0019g0029 a0002c0002t0017g0008	4	38	0.1053	-12	c.-41 others(31): Show c.-41-31946_-41-31935delCCTTCCTTCCTT		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90413971	AAAAAAAA others(5): Show AAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0036 a0001c0001t0007g0036	1	38	0.0263	-12	c.160 others(33): Show c.1603+13844_1603+13855delAAAAAAAAAATA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	4/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90413973	AAAAAAAA others(5): Show AAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0019 a0001c0008t0019	a0001c0008t0019g0029 a0001c0008t0019g0029	1	38	0.0263	-12	c.160 others(33): Show c.1603+13846_1603+13857delAAAAAAAATATA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	4/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90534441	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0022 a0001c0001t0004g0022	1	38	0.0263	-12	c.172 others(33): Show c.1724+66124_1724+66135delTGTGTGTGTGTG		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90610252	CAAATAAA others(5): Show CAAATAAATAAAT	C C	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03209.hp1 HG03130.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0018 a0001c0001t0004 a0002c0002t0018	a0001c0001t0004g0005 a0002c0002t0018g0009 a0001c0001t0004g0005 a0002c0002t0018g0009	2	38	0.0526	-12	c.172 others(33): Show c.1725-17733_1725-17722delTAAATAAATAAA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90616683	TCACACAC others(5): Show TCACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG03209.hp2 NA19240.hp1 HG02109.hp1 HG03209.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0013 a0001c0001t0003 a0001c0001t0007 a0001c0001t0013	a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0013g0035 a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0013g0035	3	38	0.0790	-12	c.172 others(33): Show c.1725-11297_1725-11286delCACACACACACA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90616730	CACACACA others(5): Show CACACACACAAAT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0022 a0001c0001t0004g0022	1	38	0.0263	-12	c.172 others(33): Show c.1725-11293_1725-11282delCACACACAAATA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90630868	GATTATTA others(5): Show GATTATTATTATT	G G	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03209.hp1 HG03130.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0018 a0001c0001t0004 a0002c0002t0018	a0001c0001t0004g0005 a0002c0002t0018g0009 a0001c0001t0004g0005 a0002c0002t0018g0009	2	38	0.0526	-12	c.193 others(31): Show c.1932+2667_1932+2678delATTATTATTATT		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	6/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90648284	GGAAAGAA others(5): Show GGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0033 a0001c0001t0020g0033	1	38	0.0263	-12	c.193 others(33): Show c.1932+20099_1932+20110delAAGAAAGAAAGA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	6/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90932897	GGAGAAAG others(5): Show GGAGAAAGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02809.hp1 HG03130.hp1 others(1): Show HG02258.hp2 HG02809.hp1 HG03130.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0003t0002	a0001c0001t0001g0002 a0001c0001t0002g0027 a0001c0001t0007g0007 others(1): Show a0001c0001t0001g0002 a0001c0001t0002g0027 a0001c0001t0007g0007 a0001c0003t0002g0014	4	38	0.1053	-12	c.217 others(31): Show c.2172+9453_2172+9464delGAAAGAAGGAGA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90932974	GAAAGAAA others(5): Show GAAAGAAAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0012 a0005c0007t0012	a0005c0007t0012g0010 a0005c0007t0012g0010	1	38	0.0263	-12	c.217 others(31): Show c.2172+9529_2172+9540delAAGAAAGAGAAA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90932978	GAAAGAGA others(5): Show GAAAGAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0025 a0002c0002t0006g0025	1	38	0.0263	-12	c.217 others(31): Show c.2172+9533_2172+9544delAAGAGAAAGAAA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90933132	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02723.hp2 HG02717.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0012 a0001c0001t0004g0022 a0001c0001t0003g0012 a0001c0001t0004g0022	2	38	0.0526	-12	c.217 others(31): Show c.2172+9725_2172+9736delTGTGTGTGTGTG		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91267144	GTAAAGGC others(5): Show GTAAAGGCAGGCT	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02897.hp2 HG02886.hp2 HG02897.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0009 a0002c0002t0006 a0001c0001t0009 a0002c0002t0006	a0001c0001t0009g0037 a0002c0002t0006g0025 a0001c0001t0009g0037 a0002c0002t0006g0025	2	38	0.0526	-12	c.221 others(35): Show c.2217+181152_2217+181163delAAAGGCAGGCTT		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91474802	TATATATA others(5): Show TATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0030 a0002c0002t0008g0030	1	38	0.0263	-12	c.221 others(35): Show c.2218-123768_2218-123757delTATATATATACA		CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10					INFO_REALIGN_3_PRIME	chr4	TogoVar

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