Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHGB_chr20_5906510_5930353	5926090	TATATATA others(5): Show TATATATATATAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp2 HG00642.hp1 HG01071.hp2 others(10): Show HG00558.hp2 HG00642.hp1 HG01071.hp2 HG01943.hp2 HG02258.hp1 HG02602.hp1 HG02647.hp2 HG03195.hp1 HG03471.hp2 HG03579.hp1 NA18956.hp1 NA18972.hp1 NA20905.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0001 a0004c0004 a0007c0007 a0001c0001 a0004c0004 a0007c0007	a0001c0001t0001 a0004c0004t0001 a0007c0007t0004 a0001c0001t0001 a0004c0004t0001 a0007c0007t0004	a0001c0001t0001g0001 a0001c0001t0001g0041 a0001c0001t0001g0042 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0086 a0001c0001t0001g0115 a0001c0001t0001g0117 a0004c0004t0001g0003 a0004c0004t0001g0009 a0004c0004t0001g0046 a0007c0007t0004g0029 a0007c0007t0004g0146 a0007c0007t0004g0158	13	440	0.0296	-12	c.10 others(23): Show c.1042_*1053delATATATATATAC	CHGB	ENSG00000089199.10	transcript	ENST00000378961.9	protein_coding		738		chr20	TogoVar
CHI3L1_chr1_203173931_203191704	203191149	TTTTATTT others(5): Show TTTTATTTATTTA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	468	0.0021	-12	c.-45 others(23): Show c.-4538_-4527delTAAATAAATAAA	CHI3L1	ENSG00000133048.13	transcript	ENST00000255409.8	protein_coding		4446		chr1	TogoVar
CHI3L2_chr1_111222713_111248440	111229681	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0089 a0001c0002t0004g0089	1	434	0.0023	-12	c.41- others(25): Show c.41-158_41-147delAAAAAAAAAAAA	CHI3L2	ENSG00000064886.14	transcript	ENST00000369748.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHID1_chr11_862859_915810	891938	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0239 a0001c0001t0001g0239	1	386	0.0026	-12	c.701 others(29): Show c.701+1477_701+1488delTTTTTTTTTTTT	CHID1	ENSG00000177830.18	transcript	ENST00000323578.13	protein_coding	8/12			chr11	TogoVar
CHID1_chr11_862859_915810	910937	TCGGGGCC others(5): Show TCGGGGCCGGGGC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01255.hp1 HG01943.hp2 others(6): Show HG01167.hp1 HG01255.hp1 HG01943.hp2 HG02523.hp2 HG03195.hp1 HG03654.hp1 NA18982.hp2 NA18985.hp1 NA18985.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0002c0002t0001	a0001c0001t0001g0007 a0001c0001t0001g0021 a0001c0001t0001g0029 others(6): Show a0001c0001t0001g0007 a0001c0001t0001g0021 a0001c0001t0001g0029 a0001c0001t0001g0182 a0001c0001t0001g0205 a0001c0001t0002g0156 a0001c0001t0002g0163 a0001c0001t0007g0120 a0002c0002t0001g0324	9	386	0.0233	-12	c.-21 others(21): Show c.-218_-207delGCCCCGGCCCCG	CHID1	ENSG00000177830.18	transcript	ENST00000323578.13	protein_coding		128		chr11	TogoVar
CHKA_chr11_68047859_68126388	68095402	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01358.hp2 HG01346.hp1 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0046 a0001c0001t0002g0047	2	276	0.0073	-12	c.462 others(29): Show c.462+1605_462+1616delTTTTTTTTTTTT	CHKA	ENSG00000110721.12	transcript	ENST00000265689.9	protein_coding	2/11			chr11	TogoVar
CHKA_chr11_68047859_68126388	68100592	AATAAATA others(5): Show AATAAATAAATAC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02280.hp1 HG02486.hp2 others(7): Show HG02109.hp2 HG02280.hp1 HG02486.hp2 HG02630.hp1 HG02896.hp1 HG02897.hp1 HG03195.hp2 HG03654.hp2 NA18906.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0209 a0001c0001t0002g0147 a0001c0001t0004g0143 others(7): Show a0001c0001t0001g0209 a0001c0001t0002g0147 a0001c0001t0004g0143 a0001c0001t0004g0144 a0001c0001t0004g0145 a0001c0001t0004g0146 a0001c0001t0004g0148 a0001c0001t0004g0149 a0001c0001t0004g0151 a0001c0001t0004g0152	10	276	0.0362	-12	c.351 others(29): Show c.351-3474_351-3463delGTATTTATTTAT	CHKA	ENSG00000110721.12	transcript	ENST00000265689.9	protein_coding	1/11			chr11	TogoVar
CHL1_chr3_191763_414417	208749	GAGGTAAT others(5): Show GAGGTAATTCTGC	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02257.hp2 HG02258.hp1 others(6): Show HG02109.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp1 HG02630.hp1 HG02895.hp1 HG02897.hp2 HG03098.hp2 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0008c0007	a0001c0001t0005 a0002c0002t0002 a0002c0002t0007 others(3): Show a0001c0001t0005 a0002c0002t0002 a0002c0002t0007 a0003c0003t0001 a0003c0003t0007 a0008c0007t0001	a0001c0001t0005g0242 a0002c0002t0002g0250 a0002c0002t0007g0244 others(6): Show a0001c0001t0005g0242 a0002c0002t0002g0250 a0002c0002t0007g0244 a0003c0003t0001g0249 a0003c0003t0007g0239 a0003c0003t0007g0247 a0003c0003t0007g0248 a0008c0007t0001g0243 a0008c0007t0001g0245	9	290	0.0310	-12	c.-17 others(33): Show c.-175+11689_-175+11700delGTAATTCTGCAG	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	309368	TTTCTTTC others(5): Show TTTCTTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02280.hp2 HG02451.hp1 others(8): Show HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03540.hp2 HG06807.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0006 a0014 a0017	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0006c0008 a0014c0020 a0017c0027	a0001c0001t0029 a0002c0002t0004 a0003c0003t0007 others(6): Show a0001c0001t0029 a0002c0002t0004 a0003c0003t0007 a0003c0003t0027 a0003c0003t0058 a0004c0004t0006 a0006c0008t0012 a0014c0020t0036 a0017c0027t0054	a0001c0001t0029g0091 a0002c0002t0004g0290 a0003c0003t0007g0239 others(8): Show a0001c0001t0029g0091 a0002c0002t0004g0290 a0003c0003t0007g0239 a0003c0003t0007g0247 a0003c0003t0007g0248 a0003c0003t0027g0087 a0003c0003t0058g0208 a0004c0004t0006g0088 a0006c0008t0012g0094 a0014c0020t0036g0127 a0017c0027t0054g0110	11	290	0.0379	-12	c.-94 others(31): Show c.-94-10311_-94-10300delTTTCCTTCCTTC	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	314323	CTATGTGT others(5): Show CTATGTGTATATA	C C	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0011 a0003c0003t0011	a0003c0003t0011g0143 a0003c0003t0011g0143	1	290	0.0035	-12	c.-94 others(29): Show c.-94-5356_-94-5345delGTGTATATATAT	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	314329	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01169.hp2 HG00140.hp1 HG01169.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0001 a0005c0005t0055 a0001c0001t0001 a0005c0005t0055	a0001c0001t0001g0188 a0005c0005t0055g0259 a0001c0001t0001g0188 a0005c0005t0055g0259	2	290	0.0069	-12	c.-94 others(29): Show c.-94-5324_-94-5313delATATATATATAT	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	324605	CTTTATTT others(5): Show CTTTATTTATTTA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp2 HG01884.hp2 others(25): Show HG01243.hp1 HG01243.hp2 HG01884.hp2 HG01952.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02895.hp2 HG02896.hp1 HG02965.hp1 HG02965.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03579.hp2 NA18522.hp1 NA19043.hp1 NA19240.hp1 NA19240.hp2	a0001 a0003 a0004 others(6): Show a0001 a0003 a0004 a0007 a0010 a0011 a0014 a0023 a0025	a0001c0001 a0003c0003 a0004c0004 others(6): Show a0001c0001 a0003c0003 a0004c0004 a0007c0006 a0010c0009 a0011c0011 a0014c0020 a0023c0018 a0025c0013	a0001c0001t0003 a0001c0001t0006 a0001c0001t0013 others(23): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0013 a0001c0001t0016 a0001c0001t0025 a0001c0001t0037 a0003c0003t0002 a0003c0003t0003 a0003c0003t0004 a0004c0004t0002 a0004c0004t0003 a0004c0004t0004 a0004c0004t0006 a0004c0004t0008 a0004c0004t0016 a0004c0004t0030 a0004c0004t0049 a0007c0006t0019 a0007c0006t0023 a0007c0006t0051 a0010c0009t0047 a0011c0011t0002 a0011c0011t0050 a0014c0020t0036 a0023c0018t0001 a0025c0013t0020	a0001c0001t0003g0229 a0001c0001t0006g0097 a0001c0001t0013g0241 others(25): Show a0001c0001t0003g0229 a0001c0001t0006g0097 a0001c0001t0013g0241 a0001c0001t0016g0100 a0001c0001t0025g0103 a0001c0001t0037g0238 a0003c0003t0002g0102 a0003c0003t0003g0014 a0003c0003t0004g0223 a0004c0004t0002g0090 a0004c0004t0003g0041 a0004c0004t0004g0212 a0004c0004t0006g0088 a0004c0004t0008g0235 a0004c0004t0008g0236 a0004c0004t0008g0237 a0004c0004t0016g0126 a0004c0004t0030g0099 a0004c0004t0049g0012 a0007c0006t0019g0124 a0007c0006t0023g0215 a0007c0006t0051g0147 a0010c0009t0047g0011 a0011c0011t0002g0098 a0011c0011t0050g0089 a0014c0020t0036g0127 a0023c0018t0001g0193 a0025c0013t0020g0031	28	290	0.0966	-12	c.92- others(27): Show c.92-1322_92-1311delATTTATTTATTT	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	3/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	331209	TTTTGTTT others(5): Show TTTTGTTTGTTTG	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02965.hp2 HG01243.hp1 HG02965.hp2	a0004 a0025 a0004 a0025	a0004c0004 a0025c0013 a0004c0004 a0025c0013	a0004c0004t0030 a0025c0013t0020 a0004c0004t0030 a0025c0013t0020	a0004c0004t0030g0099 a0025c0013t0020g0031 a0004c0004t0030g0099 a0025c0013t0020g0031	2	290	0.0069	-12	c.385 others(29): Show c.385+2875_385+2886delGTTTGTTTGTTT	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	5/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	345455	TTTATTTA others(5): Show TTTATTTATTTAA	T T	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0017 a0017	a0017c0027 a0017c0027	a0017c0027t0054 a0017c0027t0054	a0017c0027t0054g0110 a0017c0027t0054g0110	1	290	0.0035	-12	c.848 others(27): Show c.848+756_848+767delTAATTATTTATT	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	9/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHML_chr1_241623851_241645369	241629711	CATTTTAA others(5): Show CATTTTAATTCAT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02615.hp2 HG02809.hp1 others(1): Show HG02486.hp2 HG02615.hp2 HG02809.hp1 HG03098.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0018 a0002c0003t0018	a0002c0003t0018g0022 a0002c0003t0018g0022	4	452	0.0089	-12	c.40 others(23): Show c.4073_*4084delATGAATTAAAAT	CHML	ENSG00000203668.3	transcript	ENST00000366553.3	protein_coding	2/2	4073		chr1	TogoVar
CHMP1B_chr18_11846413_11859444	11846462	TATACACA others(5): Show TATACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	438	0.0023	-12	c.-50 others(23): Show c.-5049_-5038delATACACACACAC	CHMP1B	ENSG00000255112.3	transcript	ENST00000526991.3	protein_coding		4950		chr18	TogoVar
CHMP2B_chr3_87222309_87260556	87225694	GTTGCTCC others(5): Show GTTGCTCCTAAGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19083.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	414	0.0024	-12	c.-18 others(23): Show c.-1828_-1817delTTGCTCCTAAGT	CHMP2B	ENSG00000083937.10	transcript	ENST00000263780.9	protein_coding		1614		chr3	TogoVar
CHMP2B_chr3_87222309_87260556	87226096	AGCATTAT others(5): Show AGCATTATCAGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	414	0.0024	-12	c.-14 others(23): Show c.-1426_-1415delGCATTATCAGTG	CHMP2B	ENSG00000083937.10	transcript	ENST00000263780.9	protein_coding		1212		chr3	TogoVar
CHMP2B_chr3_87222309_87260556	87226589	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00408.hp2 others(96): Show HG00099.hp1 HG00323.hp2 HG00408.hp2 HG00597.hp1 HG00733.hp2 HG01069.hp1 HG01099.hp1 HG01123.hp1 HG01169.hp1 HG01192.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01358.hp1 HG01496.hp1 HG01934.hp2 HG01943.hp1 HG01952.hp2 HG01975.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02074.hp2 HG02080.hp2 HG02129.hp2 HG02132.hp1 HG02258.hp1 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02683.hp2 HG02738.hp1 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04199.hp2 NA18747.hp2 NA18940.hp1 NA18942.hp2 NA18943.hp2 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp2 NA18951.hp1 NA18952.hp2 NA18955.hp1 NA18956.hp1 NA18962.hp1 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18967.hp2 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18975.hp1 NA18977.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp1 NA18988.hp2 NA18989.hp2 NA18990.hp1 NA18991.hp2 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA19001.hp1 NA19007.hp2 NA19012.hp1 NA19054.hp1 NA19055.hp1 NA19057.hp2 NA19063.hp1 NA19064.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp2 NA19079.hp2 NA19082.hp1 NA19085.hp1 NA19088.hp1 NA19089.hp2 NA19091.hp1 NA20805.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0033 a0001c0001t0001g0080 a0001c0001t0002g0002 others(25): Show a0001c0001t0001g0033 a0001c0001t0001g0080 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0013 a0001c0001t0002g0021 a0001c0001t0002g0034 a0001c0001t0002g0081 a0001c0001t0002g0084 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0115 a0001c0002t0001g0006 a0001c0002t0001g0031	99	414	0.2391	-12	c.-93 others(21): Show c.-933_-922delTGTGTGTGTGTG	CHMP2B	ENSG00000083937.10	transcript	ENST00000263780.9	protein_coding		719		chr3	TogoVar
CHMP2B_chr3_87222309_87260556	87241445	GAAATCCC others(5): Show GAAATCCCTCCTA	G G	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	414	0.0024	-12	c.126 others(27): Show c.126+656_126+667delAAATCCCTCCTA	CHMP2B	ENSG00000083937.10	transcript	ENST00000263780.9	protein_coding	2/5			chr3	TogoVar
CHMP4C_chr8_81727448_81764515	81736085	CAATAAAT others(5): Show CAATAAATAAATA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(120): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00544.hp2 HG00558.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01928.hp1 HG01934.hp1 HG01978.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02056.hp2 HG02074.hp1 HG02083.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp2 HG02523.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02970.hp1 HG03017.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03239.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 NA18940.hp2 NA18941.hp2 NA18944.hp2 NA18945.hp1 NA18946.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18953.hp1 NA18964.hp1 NA18970.hp2 NA18977.hp2 NA18988.hp1 NA18988.hp2 NA18998.hp1 NA19003.hp1 NA19005.hp1 NA19011.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA19082.hp1 NA20129.hp2 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0005c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0001c0001t0019 a0001c0003t0002 a0002c0002t0006 a0002c0002t0013 a0005c0006t0002	a0001c0001t0001g0004 a0001c0001t0001g0018 a0001c0001t0001g0022 others(82): Show a0001c0001t0001g0004 a0001c0001t0001g0018 a0001c0001t0001g0022 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0084 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0177 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0207 a0001c0001t0001g0210 a0001c0001t0001g0216 a0001c0001t0001g0234 a0001c0001t0002g0001 a0001c0001t0002g0023 a0001c0001t0002g0027 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0052 a0001c0001t0002g0056 a0001c0001t0002g0060 a0001c0001t0002g0063 a0001c0001t0002g0068 a0001c0001t0002g0070 a0001c0001t0002g0176 a0001c0001t0002g0192 a0001c0001t0002g0195 a0001c0001t0002g0197 a0001c0001t0002g0204 a0001c0001t0002g0209 a0001c0001t0002g0217 a0001c0001t0002g0221 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0003g0050 a0001c0001t0003g0172 a0001c0001t0003g0173 a0001c0001t0003g0180 a0001c0001t0003g0205 a0001c0001t0003g0208 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0004g0071 a0001c0001t0005g0265 a0001c0001t0005g0273 a0001c0001t0006g0050 a0001c0001t0006g0171 a0001c0001t0006g0174 a0001c0001t0006g0175 a0001c0001t0006g0178 a0001c0001t0006g0179 a0001c0001t0010g0064 a0001c0001t0010g0199 a0001c0001t0012g0055 a0001c0001t0016g0170 a0001c0001t0019g0069 a0001c0003t0002g0001 a0001c0003t0002g0056 a0001c0003t0002g0219 a0002c0002t0006g0054 a0002c0002t0006g0220 a0002c0002t0013g0191 a0002c0002t0013g0206 a0005c0006t0002g0001	123	408	0.3015	-12	c.190 others(29): Show c.190+3313_190+3324delAAATAAATAAAT	CHMP4C	ENSG00000164695.5	transcript	ENST00000297265.5	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHMP6_chr17_80986841_81005133	81001769	AGACACTT others(5): Show AGACACTTCGCTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0034 a0001c0001t0003g0034	1	438	0.0023	-12	c.26 others(23): Show c.2617_*2628delGACACTTCGCTG	CHMP6	ENSG00000176108.9	transcript	ENST00000325167.9	protein_coding		1637		chr17	TogoVar
CHMP6_chr17_80986841_81005133	81005028	ATTGTGTG others(5): Show ATTGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG02895.hp1 HG03098.hp1 others(10): Show HG02818.hp2 HG02895.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03516.hp1 HG03540.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0012 a0001c0002t0005 a0001c0001t0003 a0001c0001t0012 a0001c0002t0005	a0001c0001t0003g0005 a0001c0001t0012g0005 a0001c0002t0005g0013 others(5): Show a0001c0001t0003g0005 a0001c0001t0012g0005 a0001c0002t0005g0013 a0001c0002t0005g0041 a0001c0002t0005g0042 a0001c0002t0005g0043 a0001c0002t0005g0045 a0001c0002t0005g0065	13	438	0.0297	-12	c.58 others(23): Show c.5876_*5887delTTGTGTGTGTGT	CHMP6	ENSG00000176108.9	transcript	ENST00000325167.9	protein_coding		4896		chr17	TogoVar
CHMP6_chr17_80986841_81005133	81005029	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00438.hp1 others(140): Show HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01175.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01496.hp1 HG01516.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02523.hp2 HG02602.hp1 HG02698.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG03209.hp1 HG03453.hp1 HG03490.hp2 HG03491.hp1 HG03669.hp2 HG03704.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18747.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18963.hp1 NA18964.hp1 NA18965.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18977.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18987.hp2 NA18989.hp2 NA18998.hp1 NA19000.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19007.hp1 NA19010.hp2 NA19012.hp2 NA19054.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19080.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19090.hp2 NA20129.hp1 NA20752.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0007 others(1): Show a0001c0001 a0001c0002 a0001c0007 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0018 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0002t0005 a0001c0007t0002 a0003c0004t0002	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0075 others(30): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0075 a0001c0001t0002g0001 a0001c0001t0002g0011 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0022 a0001c0001t0002g0036 a0001c0001t0002g0049 a0001c0001t0002g0052 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0061 a0001c0001t0002g0066 a0001c0001t0003g0039 a0001c0001t0004g0001 a0001c0001t0004g0008 a0001c0001t0004g0053 a0001c0001t0004g0054 a0001c0001t0011g0001 a0001c0001t0011g0035 a0001c0001t0013g0001 a0001c0001t0014g0001 a0001c0001t0016g0014 a0001c0001t0018g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0024g0003 a0001c0002t0005g0013 a0001c0007t0002g0059 a0003c0004t0002g0001	143	438	0.3265	-12	c.58 others(23): Show c.5877_*5888delTGTGTGTGTGTG	CHMP6	ENSG00000176108.9	transcript	ENST00000325167.9	protein_coding		4897		chr17	TogoVar
CHMP7_chr8_23238637_23266999	23240415	TTTGTTGT others(5): Show TTTGTTGTTGTTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0289 a0002c0002t0002g0289	1	438	0.0023	-12	c.-38 others(23): Show c.-3869_-3858delTTGTTGTTGTTG	CHMP7	ENSG00000147457.14	transcript	ENST00000397677.6	protein_coding		3221		chr8	TogoVar
CHMP7_chr8_23238637_23266999	23250620	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(153): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01168.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02257.hp2 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp2 HG02683.hp2 HG02896.hp1 HG02965.hp1 HG03041.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04184.hp2 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp2 NA18956.hp1 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18973.hp1 NA18977.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18987.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp2 NA19006.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19057.hp2 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp1 NA20752.hp1	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0008 a0006c0006 a0001c0001 a0003c0008 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0021 a0001c0001t0028 a0001c0001t0029 a0001c0001t0032 a0003c0008t0002 a0006c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0009 others(109): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0155 a0001c0001t0001g0335 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0015 a0001c0001t0002g0020 a0001c0001t0002g0052 a0001c0001t0002g0055 a0001c0001t0002g0239 a0001c0001t0002g0301 a0001c0001t0002g0302 a0001c0001t0002g0303 a0001c0001t0002g0304 a0001c0001t0002g0305 a0001c0001t0002g0306 a0001c0001t0002g0307 a0001c0001t0002g0308 a0001c0001t0002g0309 a0001c0001t0003g0001 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0094 a0001c0001t0003g0109 a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0118 a0001c0001t0003g0119 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0123 a0001c0001t0003g0124 a0001c0001t0003g0156 a0001c0001t0004g0180 a0001c0001t0004g0182 a0001c0001t0004g0183 a0001c0001t0004g0184 a0001c0001t0004g0227 a0001c0001t0006g0018 a0001c0001t0006g0037 a0001c0001t0006g0038 a0001c0001t0006g0165 a0001c0001t0006g0166 a0001c0001t0006g0167 a0001c0001t0006g0168 a0001c0001t0006g0175 a0001c0001t0006g0176 a0001c0001t0009g0051 a0001c0001t0009g0299 a0001c0001t0009g0300 a0001c0001t0011g0164 a0001c0001t0011g0170 a0001c0001t0011g0177 a0001c0001t0011g0178 a0001c0001t0015g0089 a0001c0001t0016g0077 a0001c0001t0016g0082 a0001c0001t0016g0097 a0001c0001t0016g0125 a0001c0001t0017g0162 a0001c0001t0017g0169 a0001c0001t0021g0098 a0001c0001t0021g0099 a0001c0001t0028g0088 a0001c0001t0029g0001 a0001c0001t0032g0001 a0003c0008t0002g0015 a0006c0006t0001g0068	156	438	0.3562	-12	c.471 others(29): Show c.471+1273_471+1284delGTGTGTGTGTGT	CHMP7	ENSG00000147457.14	transcript	ENST00000397677.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHM_chrX_85856180_86052558	85897306	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	245	0.0041	-12	c.141 others(31): Show c.1414-3034_1414-3023delACACACACACAC	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	11/14			chrX	TogoVar
CHM_chrX_85856180_86052558	85913332	AAAAGAAA others(5): Show AAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0120 a0001c0001t0001g0120	1	245	0.0041	-12	c.116 others(31): Show c.1167-2006_1167-1995delCTTTCTTTCTTT	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	8/14			chrX	TogoVar
CHM_chrX_85856180_86052558	85949978	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0014 a0003c0004t0014	a0003c0004t0014g0234 a0003c0004t0014g0234	1	245	0.0041	-12	c.116 others(31): Show c.1166+6163_1166+6174delATATATATATAT	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	8/14			chrX	TogoVar
CHM_chrX_85856180_86052558	85973300	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	245	0.0041	-12	c.314 others(29): Show c.314+5455_314+5466delTTTTTTTTTTTT	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	4/14			chrX	TogoVar
CHM_chrX_85856180_86052558	85976865	AACACACA others(5): Show AACACACACAAAC	A A	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0208 a0001c0001t0001g0208	1	245	0.0041	-12	c.314 others(29): Show c.314+1890_314+1901delGTTTGTGTGTGT	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	4/14			chrX	TogoVar
CHM_chrX_85856180_86052558	85976875	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0012 a0005c0009t0012	a0005c0009t0012g0225 a0005c0009t0012g0225	1	245	0.0041	-12	c.314 others(29): Show c.314+1880_314+1891delGTGTGTGTGTGT	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	4/14			chrX	TogoVar
CHM_chrX_85856180_86052558	86041726	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA19004.hp1 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0207 a0001c0001t0003g0207	1	245	0.0041	-12	c.49+ others(27): Show c.49+5746_49+5757delTATATATATATA	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	1/14			chrX	TogoVar
CHN1_chr2_174793809_175010381	174807446	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01070.hp1 HG02071.hp1 others(15): Show HG01069.hp1 HG01070.hp1 HG02071.hp1 HG02451.hp2 HG02486.hp2 HG02630.hp1 HG02735.hp1 HG03098.hp2 HG03239.hp1 HG03579.hp1 NA18612.hp1 NA18947.hp2 NA18948.hp2 NA18971.hp2 NA18975.hp2 NA19077.hp1 NA19090.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008	a0001c0001t0001g0047 a0001c0001t0001g0094 a0001c0001t0001g0096 others(15): Show a0001c0001t0001g0047 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0154 a0001c0001t0001g0179 a0001c0001t0001g0214 a0001c0001t0001g0219 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0003g0007 a0001c0001t0003g0022 a0001c0001t0004g0276 a0001c0001t0006g0038 a0001c0001t0006g0040 a0001c0001t0007g0035 a0001c0001t0008g0029	18	276	0.0652	-12	c.110 others(31): Show c.1102+1447_1102+1458delCACACACACACA	CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	11/12			chr2	TogoVar
CHN1_chr2_174793809_175010381	174974894	TTAATACA others(5): Show TTAATACACACAC	T T	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0207 a0001c0001t0001g0207	1	276	0.0036	-12	c.20- others(29): Show c.20-22704_20-22693delGTGTGTGTATTA	CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	1/12			chr2	TogoVar
CHN1_chr2_174793809_175010381	174974898	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01433.hp2 HG01517.hp1 others(10): Show HG00423.hp2 HG01433.hp2 HG01517.hp1 HG02071.hp2 HG02683.hp1 HG03017.hp2 HG03654.hp1 HG04184.hp1 NA18962.hp2 NA18992.hp2 NA19063.hp2 NA19088.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0117 a0001c0001t0005g0068 a0001c0001t0005g0089 others(10): Show a0001c0001t0002g0117 a0001c0001t0005g0068 a0001c0001t0005g0089 a0001c0001t0005g0090 a0001c0001t0005g0091 a0001c0001t0005g0100 a0001c0001t0005g0101 a0001c0001t0005g0109 a0001c0001t0005g0142 a0001c0001t0005g0143 a0001c0001t0005g0144 a0001c0001t0005g0176 a0001c0001t0005g0180	13	276	0.0471	-12	c.20- others(29): Show c.20-22708_20-22697delGTGTGTGTGTGT	CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	1/12			chr2	TogoVar
CHN1_chr2_174793809_175010381	174990233	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0159	1	276	0.0036	-12	c.19+ others(29): Show c.19+14649_19+14660delCACACACACACA	CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	1/12			chr2	TogoVar
CHN2_chr7_29189775_29519328	29195621	AGAGAGAG others(5): Show AGAGAGAGAGTGT	A A	intron_variant intron_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0232 a0001c0001t0009g0232	1	232	0.0043	-12	c.49+ others(25): Show c.49+633_49+644delAGAGAGAGTGTG	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29195643	TGTGTGTG others(5): Show TGTGTGTGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0198 a0001c0006t0002g0198	1	232	0.0043	-12	c.49+ others(25): Show c.49+655_49+666delTGTGTGAGAGAG	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29204065	CTCTGTGT others(5): Show CTCTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 NA19240.hp1 HG02809.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0010 a0001c0002t0003 a0001c0001t0010 a0001c0002t0003	a0001c0001t0010g0125 a0001c0002t0003g0068 a0001c0001t0010g0125 a0001c0002t0003g0068	2	232	0.0086	-12	c.49+ others(27): Show c.49+9077_49+9088delCTGTGTGTGTGT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29204067	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0069 a0002c0003t0002g0069	1	232	0.0043	-12	c.49+ others(27): Show c.49+9115_49+9126delGTGTGTGTGTGT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29252578	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03195.hp2 HG03041.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0040 a0001c0001t0012g0170 a0001c0001t0012g0040 a0001c0001t0012g0170	2	232	0.0086	-12	c.49+ others(29): Show c.49+57605_49+57616delTTTTTTTTTTTT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29273331	ATATATAT others(5): Show ATATATATATGTG	A A	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0125 a0001c0001t0010g0125	1	232	0.0043	-12	c.49+ others(29): Show c.49+78351_49+78362delGTGTATATATAT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29283922	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00438.hp1 others(53): Show HG00140.hp2 HG00280.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG01071.hp1 HG01192.hp1 HG01517.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp2 HG02055.hp1 HG02080.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp2 HG02451.hp2 HG02622.hp1 HG02647.hp1 HG02735.hp2 HG03017.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03471.hp1 HG03471.hp2 HG03491.hp1 HG03704.hp1 HG04204.hp1 HG04228.hp2 NA18906.hp2 NA18957.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18984.hp1 NA18990.hp2 NA18991.hp1 NA18998.hp2 NA19012.hp1 NA19030.hp2 NA19063.hp1 NA19080.hp1 NA19082.hp2 NA19084.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(4): Show a0001c0001 a0001c0002 a0001c0005 a0001c0008 a0002c0003 a0002c0004 a0002c0009	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(21): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0023 a0001c0001t0024 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0010 a0001c0002t0014 a0001c0002t0020 a0001c0005t0001 a0001c0008t0011 a0002c0003t0004 a0002c0003t0021 a0002c0004t0001 a0002c0004t0006 a0002c0004t0012 a0002c0009t0002	a0001c0001t0001g0082 a0001c0001t0001g0120 a0001c0001t0001g0126 others(53): Show a0001c0001t0001g0082 a0001c0001t0001g0120 a0001c0001t0001g0126 a0001c0001t0001g0183 a0001c0001t0001g0213 a0001c0001t0003g0016 a0001c0001t0003g0044 a0001c0001t0003g0049 a0001c0001t0003g0079 a0001c0001t0003g0097 a0001c0001t0003g0111 a0001c0001t0003g0161 a0001c0001t0003g0194 a0001c0001t0003g0214 a0001c0001t0005g0127 a0001c0001t0005g0159 a0001c0001t0005g0179 a0001c0001t0005g0193 a0001c0001t0006g0037 a0001c0001t0006g0144 a0001c0001t0006g0145 a0001c0001t0007g0212 a0001c0001t0008g0131 a0001c0001t0009g0054 a0001c0001t0012g0056 a0001c0001t0012g0170 a0001c0001t0012g0172 a0001c0001t0023g0206 a0001c0001t0024g0080 a0001c0002t0001g0063 a0001c0002t0001g0085 a0001c0002t0002g0027 a0001c0002t0002g0030 a0001c0002t0002g0078 a0001c0002t0002g0083 a0001c0002t0002g0098 a0001c0002t0002g0219 a0001c0002t0004g0042 a0001c0002t0004g0088 a0001c0002t0004g0199 a0001c0002t0004g0207 a0001c0002t0010g0210 a0001c0002t0014g0067 a0001c0002t0020g0052 a0001c0005t0001g0051 a0001c0008t0011g0230 a0002c0003t0004g0110 a0002c0003t0004g0124 a0002c0003t0004g0146 a0002c0003t0021g0112 a0002c0004t0001g0031 a0002c0004t0001g0059 a0002c0004t0006g0113 a0002c0004t0006g0201 a0002c0004t0012g0180 a0002c0009t0002g0033	56	232	0.2414	-12	c.50- others(29): Show c.50-70684_50-70673delTTTTTTTTTTTT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29301342	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03471.hp2 NA18991.hp1 NA19240.hp1 HG03471.hp2 NA18991.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0010 a0001c0001t0012 a0001c0001t0003 a0001c0001t0010 a0001c0001t0012	a0001c0001t0003g0016 a0001c0001t0010g0125 a0001c0001t0012g0172 a0001c0001t0003g0016 a0001c0001t0010g0125 a0001c0001t0012g0172	3	232	0.0129	-12	c.50- others(29): Show c.50-53247_50-53236delCACACACACACA	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29326129	ATTGTTTG others(5): Show ATTGTTTGTTTGT	A A	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0143 a0001c0001t0003g0143	1	232	0.0043	-12	c.50- others(29): Show c.50-28477_50-28466delGTTTGTTTGTTT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29405164	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02886.hp2 HG02976.hp1 HG02622.hp2 HG02886.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0011 a0001c0002t0002 a0001c0001t0001 a0001c0001t0011 a0001c0002t0002	a0001c0001t0001g0103 a0001c0001t0011g0046 a0001c0002t0002g0150 a0001c0001t0001g0103 a0001c0001t0011g0046 a0001c0002t0002g0150	3	232	0.0129	-12	c.576 others(29): Show c.576+4383_576+4394delACACACACACAC	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29416774	GTGTATAT others(5): Show GTGTATATGTGTA	G G	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0028 a0001c0001t0005g0028	1	232	0.0043	-12	c.576 others(31): Show c.576+15956_576+15967delGTATGTATATGT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29458377	GCACACAC others(5): Show GCACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG03239.hp1 NA18971.hp1 HG03239.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0009 a0001c0001t0005 a0001c0001t0009	a0001c0001t0005g0156 a0001c0001t0009g0054 a0001c0001t0005g0156 a0001c0001t0009g0054	2	232	0.0086	-12	c.577 others(31): Show c.577-21872_577-21861delACACACACACAC	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29461816	TTGGATGG others(5): Show TTGGATGGATGGA	T T	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02976.hp2 HG03195.hp1 others(3): Show HG02572.hp2 HG02976.hp2 HG03195.hp1 NA18982.hp1 NA18998.hp2 NA19063.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0001t0028 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0028 a0001c0002t0002 a0002c0004t0001	a0001c0001t0001g0166 a0001c0001t0028g0050 a0001c0002t0002g0171 others(3): Show a0001c0001t0001g0166 a0001c0001t0028g0050 a0001c0002t0002g0171 a0002c0004t0001g0031 a0002c0004t0001g0038 a0002c0004t0001g0059	6	232	0.0259	-12	c.577 others(31): Show c.577-18418_577-18407delTGGATGGATGGA	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr7	TogoVar

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