Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CLOCK_chr4_55422903_55551909	55524400	AAAAAACA others(5): Show AAAAAACAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01167.hp1 HG01261.hp1 others(1): Show HG01123.hp1 HG01167.hp1 HG01261.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0044 a0001c0001t0022 a0001c0001t0044	a0001c0001t0022g0065 a0001c0001t0022g0066 a0001c0001t0022g0070 others(1): Show a0001c0001t0022g0065 a0001c0001t0022g0066 a0001c0001t0022g0070 a0001c0001t0044g0059	4	338	0.0118	-12	c.-28 others(33): Show c.-289-14347_-289-14336delGTTTTTGTTTTT	CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	1/22			chr4	TogoVar
CLOCK_chr4_55422903_55551909	55542344	AAATAATA others(5): Show AAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01167.hp1 HG01261.hp1 HG01123.hp1 HG01167.hp1 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0065 a0001c0001t0022g0066 a0001c0001t0022g0070 a0001c0001t0022g0065 a0001c0001t0022g0066 a0001c0001t0022g0070	3	338	0.0089	-12	c.-29 others(31): Show c.-290+4426_-290+4437delATTATTATTATT	CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	1/22			chr4	TogoVar
CLOCK_chr4_55422903_55551909	55542370	ATAATAAT others(5): Show ATAATAATAATAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02622.hp1 HG02630.hp1 others(2): Show HG01884.hp2 HG02622.hp1 HG02630.hp1 HG02970.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0018 a0002c0003t0028 a0002c0003t0066 a0001c0001t0018 a0002c0003t0028 a0002c0003t0066	a0001c0001t0018g0287 a0002c0003t0028g0292 a0002c0003t0028g0293 others(2): Show a0001c0001t0018g0287 a0002c0003t0028g0292 a0002c0003t0028g0293 a0002c0003t0028g0294 a0002c0003t0066g0295	5	338	0.0148	-12	c.-29 others(31): Show c.-290+4400_-290+4411delATATTATTATTA	CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	1/22			chr4	TogoVar
CLOCK_chr4_55422903_55551909	55542373	ATAATAAT others(5): Show ATAATAATATTAT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00733.hp2 HG00735.hp2 others(13): Show HG00642.hp1 HG00733.hp2 HG00735.hp2 HG01081.hp1 HG01123.hp2 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01433.hp2 HG02109.hp2 HG02602.hp2 HG02818.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0006 a0002c0003 others(1): Show a0001c0002 a0001c0006 a0002c0003 a0002c0008	a0001c0002t0002 a0001c0002t0012 a0001c0002t0026 others(4): Show a0001c0002t0002 a0001c0002t0012 a0001c0002t0026 a0001c0006t0002 a0002c0003t0063 a0002c0003t0074 a0002c0008t0024	a0001c0002t0002g0197 a0001c0002t0002g0199 a0001c0002t0002g0200 others(13): Show a0001c0002t0002g0197 a0001c0002t0002g0199 a0001c0002t0002g0200 a0001c0002t0002g0201 a0001c0002t0002g0202 a0001c0002t0002g0203 a0001c0002t0002g0204 a0001c0002t0002g0272 a0001c0002t0002g0273 a0001c0002t0002g0275 a0001c0002t0012g0276 a0001c0002t0026g0274 a0001c0006t0002g0198 a0002c0003t0063g0290 a0002c0003t0074g0291 a0002c0008t0024g0322	16	338	0.0473	-12	c.-29 others(31): Show c.-290+4397_-290+4408delATAATATTATTA	CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	1/22			chr4	TogoVar
CLPB_chr11_72280495_72439531	72286223	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02630.hp1 HG03139.hp2 HG02630.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0065 a0001c0001t0056 a0001c0001t0065	a0001c0001t0056g0123 a0001c0001t0065g0194 a0001c0001t0056g0123 a0001c0001t0065g0194	2	206	0.0097	-12	c.71 others(23): Show c.7132_*7143delAAAAAAAAAAAA	CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	17/17	7132		chr11	TogoVar
CLPB_chr11_72280495_72439531	72297636	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02145.hp1 HG03486.hp1 others(3): Show HG00621.hp2 HG02145.hp1 HG03486.hp1 NA18941.hp1 NA18946.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0001c0001t0025 a0001c0001t0064 others(3): Show a0001c0001t0002 a0001c0001t0025 a0001c0001t0064 a0001c0001t0110 a0002c0003t0016 a0002c0003t0030	a0001c0001t0002g0055 a0001c0001t0025g0044 a0001c0001t0064g0082 others(3): Show a0001c0001t0002g0055 a0001c0001t0025g0044 a0001c0001t0064g0082 a0001c0001t0110g0043 a0002c0003t0016g0143 a0002c0003t0030g0144	6	206	0.0291	-12	c.142 others(31): Show c.1420-2000_1420-1989delACACACACACAC	CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	12/16			chr11	TogoVar
CLPB_chr11_72280495_72439531	72433540	GAAATAAA others(5): Show GAAATAAATAAAT	G G	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01123.hp1 HG01261.hp2 others(11): Show HG00733.hp2 HG01123.hp1 HG01261.hp2 HG01361.hp1 HG01934.hp2 HG02015.hp2 HG02027.hp1 HG02148.hp2 HG02273.hp1 HG02300.hp2 HG02602.hp2 NA18972.hp1 NA18983.hp1 NA19003.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0009 others(1): Show a0001c0001 a0001c0002 a0001c0009 a0005c0012	a0001c0001t0006 a0001c0001t0015 a0001c0001t0021 others(6): Show a0001c0001t0006 a0001c0001t0015 a0001c0001t0021 a0001c0001t0022 a0001c0001t0051 a0001c0002t0011 a0001c0002t0013 a0001c0009t0071 a0005c0012t0103	a0001c0001t0006g0172 a0001c0001t0015g0168 a0001c0001t0015g0169 others(11): Show a0001c0001t0006g0172 a0001c0001t0015g0168 a0001c0001t0015g0169 a0001c0001t0015g0170 a0001c0001t0021g0174 a0001c0001t0022g0175 a0001c0001t0051g0173 a0001c0002t0011g0177 a0001c0002t0011g0178 a0001c0002t0011g0179 a0001c0002t0011g0180 a0001c0002t0013g0176 a0001c0009t0071g0167 a0005c0012t0103g0171	14	206	0.0680	-12	c.403 others(27): Show c.403+520_403+531delATTTATTTATTT	CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	1/16			chr11	TogoVar
CLPS_chr6_35789982_35802323	35794660	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01081.hp1 HG02015.hp1 others(5): Show HG01070.hp1 HG01081.hp1 HG02015.hp1 HG02132.hp2 HG03486.hp2 HG03688.hp1 HG04115.hp2 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004	8	418	0.0191	-12	c.47 others(21): Show c.474_*485delACACACACACAC	CLPS	ENSG00000137392.10	transcript	ENST00000259938.7	protein_coding		321		chr6	TogoVar
CLPS_chr6_35789982_35802323	35794683	GTGTGTGT others(5): Show GTGTGTGTGTGTA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG02071.hp1 HG02145.hp1 others(17): Show HG00642.hp1 HG02071.hp1 HG02145.hp1 HG02451.hp1 HG02559.hp2 HG02572.hp1 HG02735.hp2 HG02809.hp1 HG03491.hp1 HG03942.hp1 NA18906.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18961.hp2 NA18987.hp2 NA19030.hp2 NA19065.hp1 NA19068.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 a0002c0002t0001g0012	20	418	0.0479	-12	c.45 others(21): Show c.451_*462delTACACACACACA	CLPS	ENSG00000137392.10	transcript	ENST00000259938.7	protein_coding		298		chr6	TogoVar
CLPS_chr6_35789982_35802323	35797482	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	418	0.0024	-12	c.-20 others(21): Show c.-206_-195delACACACACACAC	CLPS	ENSG00000137392.10	transcript	ENST00000259938.7	protein_coding		160		chr6	TogoVar
CLPTM1L_chr5_1312752_1350099	1345306	CCCCAACC others(5): Show CCCCAACCGCCGA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	370	0.0027	-12	c.-47 others(21): Show c.-477_-466delTCGGCGGTTGGG	CLPTM1L	ENSG00000049656.14	transcript	ENST00000320895.10	protein_coding		208		chr5	TogoVar
CLPTM1_chr19_44950380_44998341	44964298	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0001 a0001c0015t0001	a0001c0015t0001g0201 a0001c0015t0001g0201	1	374	0.0027	-12	c.185 others(29): Show c.185+2242_185+2253delTTTTTTTTTTTT	CLPTM1	ENSG00000104853.16	transcript	ENST00000337392.10	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CLPTM1_chr19_44950380_44998341	44993773	CATCTCAA others(5): Show CATCTCAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0257 a0001c0001t0001g0257	1	374	0.0027	-12	c.87 others(21): Show c.877_*888delATCTCAAAAAAA	CLPTM1	ENSG00000104853.16	transcript	ENST00000337392.10	protein_coding		433		chr19	TogoVar
CLPX_chr15_65143219_65190342	65145958	AAAATATA others(5): Show AAAATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01168.hp2 HG01169.hp1 others(1): Show HG01109.hp1 HG01168.hp2 HG01169.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0138 a0001c0001t0002g0140 a0001c0001t0002g0147 others(1): Show a0001c0001t0002g0138 a0001c0001t0002g0140 a0001c0001t0002g0147 a0001c0001t0002g0148	4	190	0.0211	-12	c.48 others(23): Show c.4853_*4864delATATATATATTT	CLPX	ENSG00000166855.9	transcript	ENST00000300107.7	protein_coding		2260		chr15	TogoVar
CLPX_chr15_65143219_65190342	65151456	GAAAAAAA others(5): Show GAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0176 a0001c0001t0001g0176	1	190	0.0053	-12	c.181 others(29): Show c.1812-555_1812-544delTTTTTTTTTTTT	CLPX	ENSG00000166855.9	transcript	ENST00000300107.7	protein_coding	13/13			chr15	TogoVar
CLPX_chr15_65143219_65190342	65181749	AAAATAAA others(5): Show AAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02886.hp2 HG02895.hp2 others(3): Show HG02615.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02970.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0009 a0001c0001t0008 a0001c0001t0009	a0001c0001t0008g0012 a0001c0001t0008g0013 a0001c0001t0008g0014 others(3): Show a0001c0001t0008g0012 a0001c0001t0008g0013 a0001c0001t0008g0014 a0001c0001t0009g0015 a0001c0001t0009g0016 a0001c0001t0009g0017	6	190	0.0316	-12	c.80- others(27): Show c.80-1557_80-1546delATTTATTTATTT	CLPX	ENSG00000166855.9	transcript	ENST00000300107.7	protein_coding	1/13			chr15	TogoVar
CLSPN_chr1_35727112_35774978	35728921	AACACACA others(5): Show AACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG02145.hp2 HG02258.hp1 others(8): Show HG01255.hp1 HG02145.hp2 HG02258.hp1 HG03041.hp1 HG03130.hp2 HG03453.hp1 HG03540.hp1 NA18982.hp1 NA19009.hp2 NA19062.hp1 NA19076.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0006 a0008 a0013 a0018	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006 a0008c0009 a0013c0014 a0018c0018	a0001c0001t0003 a0001c0001t0009 a0002c0002t0005 others(6): Show a0001c0001t0003 a0001c0001t0009 a0002c0002t0005 a0002c0002t0007 a0003c0003t0004 a0006c0006t0009 a0008c0009t0005 a0013c0014t0023 a0018c0018t0022	a0001c0001t0003g0014 a0001c0001t0003g0041 a0001c0001t0003g0211 others(8): Show a0001c0001t0003g0014 a0001c0001t0003g0041 a0001c0001t0003g0211 a0001c0001t0009g0218 a0002c0002t0005g0129 a0002c0002t0007g0142 a0003c0003t0004g0036 a0006c0006t0009g0031 a0008c0009t0005g0235 a0013c0014t0023g0233 a0018c0018t0022g0213	11	296	0.0372	-12	c.75 others(23): Show c.7563_*7574delGTGTGTGTGTGT	CLSPN	ENSG00000092853.14	transcript	ENST00000318121.8	protein_coding		3190		chr1	TogoVar
CLSPN_chr1_35727112_35774978	35770420	AATATATA others(5): Show AATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	1	296	0.0034	-12	c.-56 others(21): Show c.-562_-551delATATATATATAT	CLSPN	ENSG00000092853.14	transcript	ENST00000318121.8	protein_coding		443		chr1	TogoVar
CLSTN1_chr1_9723926_9828965	9796260	CAAAAACA others(5): Show CAAAAACAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp1 HG02109.hp2 others(9): Show HG01884.hp1 HG01891.hp1 HG02109.hp2 HG02451.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02976.hp2 HG03453.hp1 HG03516.hp2 NA19240.hp1	a0002 a0008 a0011 a0002 a0008 a0011	a0002c0002 a0008c0013 a0011c0009 a0002c0002 a0008c0013 a0011c0009	a0002c0002t0002 a0008c0013t0002 a0011c0009t0002 a0002c0002t0002 a0008c0013t0002 a0011c0009t0002	a0002c0002t0002g0010 a0002c0002t0002g0011 a0002c0002t0002g0012 others(9): Show a0002c0002t0002g0010 a0002c0002t0002g0011 a0002c0002t0002g0012 a0002c0002t0002g0014 a0002c0002t0002g0015 a0002c0002t0002g0016 a0002c0002t0002g0017 a0002c0002t0002g0018 a0002c0002t0002g0019 a0002c0002t0002g0020 a0008c0013t0002g0013 a0011c0009t0002g0002	12	270	0.0444	-12	c.92- others(29): Show c.92-22878_92-22867delTTTTTTGTTTTT	CLSTN1	ENSG00000171603.18	transcript	ENST00000377298.9	protein_coding	1/18			chr1	TogoVar
CLSTN2_chr3_139930185_140582397	139975761	ACAATTTC others(5): Show ACAATTTCCCCAC	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02280.hp2 HG02559.hp2 others(4): Show HG01081.hp1 HG02280.hp2 HG02559.hp2 HG02622.hp2 HG02886.hp2 HG03098.hp1 HG03453.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0018 a0001c0019 others(1): Show a0001c0001 a0001c0018 a0001c0019 a0002c0002	a0001c0001t0001 a0001c0001t0025 a0001c0018t0002 others(2): Show a0001c0001t0001 a0001c0001t0025 a0001c0018t0002 a0001c0019t0021 a0002c0002t0011	a0001c0001t0001g0003 a0001c0001t0001g0037 a0001c0001t0001g0045 others(4): Show a0001c0001t0001g0003 a0001c0001t0001g0037 a0001c0001t0001g0045 a0001c0001t0025g0004 a0001c0018t0002g0006 a0001c0019t0021g0036 a0002c0002t0011g0039	7	110	0.0636	-12	c.109 others(31): Show c.109+40281_109+40292delATTTCCCCACCA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	139978648	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp2 HG00735.hp1 others(9): Show HG00621.hp1 HG00621.hp2 HG00735.hp1 HG01109.hp1 HG01358.hp1 HG02257.hp2 HG03139.hp2 HG03209.hp1 HG03704.hp2 NA19087.hp1 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0002 others(3): Show a0001c0001 a0001c0009 a0002c0002 a0002c0007 a0002c0010 a0002c0023	a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 others(8): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 a0001c0001t0035 a0001c0009t0010 a0002c0002t0001 a0002c0002t0033 a0002c0002t0040 a0002c0007t0003 a0002c0010t0003 a0002c0023t0010	a0001c0001t0001g0019 a0001c0001t0005g0026 a0001c0001t0005g0089 others(9): Show a0001c0001t0001g0019 a0001c0001t0005g0026 a0001c0001t0005g0089 a0001c0001t0013g0090 a0001c0001t0035g0082 a0001c0009t0010g0110 a0002c0002t0001g0065 a0002c0002t0033g0008 a0002c0002t0040g0078 a0002c0007t0003g0043 a0002c0010t0003g0109 a0002c0023t0010g0104	12	110	0.1091	-12	c.109 others(31): Show c.109+43209_109+43220delGTGTGTGTGTGT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140006797	TTATTATT others(5): Show TTATTATTGGTAC	T T	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0086 a0002c0002t0002g0086	1	110	0.0091	-12	c.109 others(31): Show c.109+71316_109+71327delATTATTGGTACT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140089580	TTTTATTT others(5): Show TTTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0002 a0005c0011t0002	a0005c0011t0002g0087 a0005c0011t0002g0087	1	110	0.0091	-12	c.110 others(31): Show c.110-86335_110-86324delATTTATTTATTT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140135087	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0003 a0003	a0003c0012 a0003c0012	a0003c0012t0008 a0003c0012t0008	a0003c0012t0008g0014 a0003c0012t0008g0014	1	110	0.0091	-12	c.110 others(31): Show c.110-40844_110-40833delCACACACACACA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140135115	CACATATA others(5): Show CACATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0034 a0002c0005t0001g0034	1	110	0.0091	-12	c.110 others(31): Show c.110-40834_110-40823delCATATATATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240140	CTCTCTCT others(5): Show CTCTCTCTCTCTG	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02970.hp1 HG02145.hp2 HG02970.hp1	a0002 a0005 a0002 a0005	a0002c0005 a0005c0011 a0002c0005 a0005c0011	a0002c0005t0004 a0005c0011t0002 a0002c0005t0004 a0005c0011t0002	a0002c0005t0004g0077 a0005c0011t0002g0087 a0002c0005t0004g0077 a0005c0011t0002g0087	2	110	0.0182	-12	c.232 others(31): Show c.232+64079_232+64090delGTCTCTCTCTCT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240168	CTCTCTCT others(5): Show CTCTCTCTATATA	C C	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0017 a0001c0001t0013g0017	1	110	0.0091	-12	c.232 others(31): Show c.232+64097_232+64108delCTCTCTATATAT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240213	CACACACA others(5): Show CACACACACATAT	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01884.hp2 HG02145.hp2 others(3): Show HG01496.hp2 HG01884.hp2 HG02145.hp2 HG02970.hp1 HG03130.hp2 HG03486.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0002c0005 others(1): Show a0001c0001 a0002c0002 a0002c0005 a0005c0011	a0001c0001t0011 a0002c0002t0004 a0002c0002t0026 others(2): Show a0001c0001t0011 a0002c0002t0004 a0002c0002t0026 a0002c0005t0004 a0005c0011t0002	a0001c0001t0011g0031 a0002c0002t0004g0107 a0002c0002t0026g0094 others(3): Show a0001c0001t0011g0031 a0002c0002t0004g0107 a0002c0002t0026g0094 a0002c0005t0004g0077 a0002c0005t0004g0092 a0005c0011t0002g0087	6	110	0.0546	-12	c.232 others(31): Show c.232+64142_232+64153delCACACACATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140257561	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02257.hp2 HG03130.hp2 others(2): Show HG01496.hp2 HG02257.hp2 HG03130.hp2 HG03486.hp2 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0005 others(2): Show a0001c0001 a0002c0002 a0002c0005 a0002c0016 a0002c0023	a0001c0001t0011 a0002c0002t0026 a0002c0005t0004 others(2): Show a0001c0001t0011 a0002c0002t0026 a0002c0005t0004 a0002c0016t0015 a0002c0023t0010	a0001c0001t0011g0031 a0002c0002t0026g0094 a0002c0005t0004g0092 others(2): Show a0001c0001t0011g0031 a0002c0002t0026g0094 a0002c0005t0004g0092 a0002c0016t0015g0088 a0002c0023t0010g0104	5	110	0.0455	-12	c.232 others(31): Show c.232+81517_232+81528delGTGTGTGTGTGT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140264375	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02280.hp1 HG06807.hp2 HG01884.hp1 HG02280.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0006 a0001c0001 a0001c0003 a0001c0006	a0001c0001t0006 a0001c0003t0003 a0001c0006t0004 a0001c0001t0006 a0001c0003t0003 a0001c0006t0004	a0001c0001t0006g0040 a0001c0003t0003g0010 a0001c0006t0004g0098 a0001c0001t0006g0040 a0001c0003t0003g0010 a0001c0006t0004g0098	3	110	0.0273	-12	c.232 others(31): Show c.232+88344_232+88355delTATATATATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140306848	TTTATTAT others(5): Show TTTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02723.hp1 HG01243.hp2 HG02723.hp1	a0001 a0002 a0001 a0002	a0001c0014 a0002c0021 a0001c0014 a0002c0021	a0001c0014t0032 a0002c0021t0009 a0001c0014t0032 a0002c0021t0009	a0001c0014t0032g0028 a0002c0021t0009g0030 a0001c0014t0032g0028 a0002c0021t0009g0030	2	110	0.0182	-12	c.233 others(31): Show c.233-96757_233-96746delATTATTATTATT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140311287	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02559.hp1 HG02559.hp2 others(3): Show HG01884.hp1 HG02559.hp1 HG02559.hp2 HG02922.hp1 HG02965.hp2 HG03516.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0018 others(2): Show a0001c0001 a0001c0003 a0001c0018 a0002c0002 a0002c0022	a0001c0001t0002 a0001c0003t0003 a0001c0018t0002 others(3): Show a0001c0001t0002 a0001c0003t0003 a0001c0018t0002 a0002c0002t0002 a0002c0002t0005 a0002c0022t0010	a0001c0001t0002g0091 a0001c0003t0003g0010 a0001c0018t0002g0006 others(3): Show a0001c0001t0002g0091 a0001c0003t0003g0010 a0001c0018t0002g0006 a0002c0002t0002g0054 a0002c0002t0005g0050 a0002c0022t0010g0020	6	110	0.0546	-12	c.233 others(31): Show c.233-92317_233-92306delTTTTTTTTTTTT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140419520	CATATGTG others(5): Show CATATGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02257.hp1 HG03139.hp2 HG00735.hp1 HG02257.hp1 HG03139.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0002c0002t0011 a0001c0001t0005 a0002c0002t0011	a0001c0001t0005g0026 a0001c0001t0005g0089 a0002c0002t0011g0103 a0001c0001t0005g0026 a0001c0001t0005g0089 a0002c0002t0011g0103	3	110	0.0273	-12	c.638 others(29): Show c.638-1600_638-1589delGTGTGTGTATAT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140427217	ATATATAT others(5): Show ATATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02630.hp1 HG01243.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0030 a0001c0008t0016 a0001c0001t0030 a0001c0008t0016	a0001c0001t0030g0059 a0001c0008t0016g0051 a0001c0001t0030g0059 a0001c0008t0016g0051	2	110	0.0182	-12	c.787 others(29): Show c.787+5951_787+5962delGTGTGTATATAT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140438278	TGGGGAAT others(5): Show TGGGGAATAGAGG	T T	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01081.hp2 HG01109.hp2 others(39): Show HG00621.hp1 HG01081.hp2 HG01109.hp2 HG01243.hp1 HG01243.hp2 HG01346.hp1 HG01433.hp1 HG01496.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp2 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03225.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp2 HG03688.hp1 HG03704.hp1 NA18977.hp1 NA19043.hp2 NA19066.hp1 NA19079.hp1 NA19079.hp2 NA19087.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0006	a0001c0001 a0001c0003 a0001c0006 others(13): Show a0001c0001 a0001c0003 a0001c0006 a0001c0008 a0001c0014 a0001c0018 a0002c0002 a0002c0004 a0002c0007 a0002c0010 a0002c0016 a0002c0021 a0002c0022 a0002c0023 a0004c0013 a0006c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(29): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0011 a0001c0001t0014 a0001c0001t0030 a0001c0001t0042 a0001c0003t0003 a0001c0006t0031 a0001c0008t0016 a0001c0014t0032 a0001c0018t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0005 a0002c0002t0011 a0002c0002t0027 a0002c0002t0033 a0002c0002t0044 a0002c0004t0001 a0002c0004t0007 a0002c0004t0017 a0002c0004t0037 a0002c0004t0038 a0002c0007t0003 a0002c0010t0024 a0002c0016t0015 a0002c0021t0009 a0002c0022t0010 a0002c0023t0010 a0004c0013t0008 a0006c0020t0034	a0001c0001t0001g0019 a0001c0001t0001g0076 a0001c0001t0001g0093 others(39): Show a0001c0001t0001g0019 a0001c0001t0001g0076 a0001c0001t0001g0093 a0001c0001t0002g0091 a0001c0001t0002g0105 a0001c0001t0006g0040 a0001c0001t0006g0055 a0001c0001t0006g0057 a0001c0001t0011g0031 a0001c0001t0014g0001 a0001c0001t0030g0059 a0001c0001t0042g0011 a0001c0003t0003g0080 a0001c0006t0031g0024 a0001c0008t0016g0051 a0001c0014t0032g0028 a0001c0018t0002g0006 a0002c0002t0001g0022 a0002c0002t0002g0054 a0002c0002t0002g0086 a0002c0002t0005g0050 a0002c0002t0011g0103 a0002c0002t0027g0058 a0002c0002t0033g0008 a0002c0002t0044g0096 a0002c0004t0001g0072 a0002c0004t0007g0067 a0002c0004t0007g0085 a0002c0004t0017g0061 a0002c0004t0037g0073 a0002c0004t0038g0108 a0002c0007t0003g0015 a0002c0007t0003g0043 a0002c0007t0003g0083 a0002c0010t0024g0023 a0002c0016t0015g0088 a0002c0021t0009g0030 a0002c0022t0010g0020 a0002c0023t0010g0104 a0004c0013t0008g0099 a0004c0013t0008g0106 a0006c0020t0034g0102	42	110	0.3818	-12	c.788 others(31): Show c.788-10239_788-10228delGGGAATAGAGGG	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140490117	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02257.hp1 HG04199.hp1 HG01358.hp2 HG02257.hp1 HG04199.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0007 a0002c0002t0001 a0002c0002t0011 a0001c0001t0007 a0002c0002t0001 a0002c0002t0011	a0001c0001t0007g0084 a0002c0002t0001g0066 a0002c0002t0011g0103 a0001c0001t0007g0084 a0002c0002t0001g0066 a0002c0002t0011g0103	3	110	0.0273	-12	c.134 others(33): Show c.1344+23420_1344+23431delCACACACACACA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140533710	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01261.hp1 HG01346.hp2 others(9): Show HG01123.hp2 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG02135.hp2 HG02257.hp2 HG03704.hp1 HG04199.hp1 NA18977.hp1 NA19079.hp2 NA19087.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0002 others(3): Show a0001c0001 a0001c0009 a0002c0002 a0002c0004 a0002c0007 a0002c0023	a0001c0001t0001 a0001c0001t0039 a0001c0009t0010 others(7): Show a0001c0001t0001 a0001c0001t0039 a0001c0009t0010 a0002c0002t0001 a0002c0004t0001 a0002c0004t0007 a0002c0004t0017 a0002c0004t0038 a0002c0007t0003 a0002c0023t0010	a0001c0001t0001g0063 a0001c0001t0039g0079 a0001c0009t0010g0110 others(9): Show a0001c0001t0001g0063 a0001c0001t0039g0079 a0001c0009t0010g0110 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0070 a0002c0004t0001g0072 a0002c0004t0007g0067 a0002c0004t0017g0061 a0002c0004t0038g0108 a0002c0007t0003g0043 a0002c0023t0010g0104	12	110	0.1091	-12	c.150 others(31): Show c.1507+1235_1507+1246delAAAAAAAAAAAA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	9/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN3_chr12_7125371_7163945	7145346	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG03225.hp1 HG02615.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0131 a0001c0001t0003g0132 a0001c0001t0003g0131 a0001c0001t0003g0132	2	394	0.0051	-12	c.184 others(31): Show c.1847+2049_1847+2060delTGTGTGTGTGTG	CLSTN3	ENSG00000139182.15	transcript	ENST00000266546.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLSTN3_chr12_7125371_7163945	7148156	AAAAGAAA others(5): Show AAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00609.hp2 HG00741.hp1 others(14): Show HG00323.hp2 HG00609.hp2 HG00741.hp1 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01891.hp1 HG02083.hp1 HG02895.hp2 HG03139.hp2 HG03453.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG06807.hp1 NA18947.hp2 NA19083.hp2	a0001 a0004 a0008 a0001 a0004 a0008	a0001c0001 a0004c0006 a0008c0021 a0001c0001 a0004c0006 a0008c0021	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0004c0006t0001 a0008c0021t0003	a0001c0001t0001g0037 a0001c0001t0001g0073 a0001c0001t0001g0086 others(13): Show a0001c0001t0001g0037 a0001c0001t0001g0073 a0001c0001t0001g0086 a0001c0001t0001g0092 a0001c0001t0001g0106 a0001c0001t0001g0114 a0001c0001t0001g0239 a0001c0001t0001g0256 a0001c0001t0001g0266 a0001c0001t0001g0282 a0001c0001t0003g0222 a0001c0001t0003g0223 a0001c0001t0004g0119 a0001c0001t0004g0120 a0004c0006t0001g0012 a0008c0021t0003g0228	17	394	0.0432	-12	c.184 others(29): Show c.1848-768_1848-757delGAAAGAAAGAAA	CLSTN3	ENSG00000139182.15	transcript	ENST00000266546.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLSTN3_chr12_7125371_7163945	7160204	GCCTCCCA others(5): Show GCCTCCCACCTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp1 HG01168.hp1 HG03654.hp1 others(4): Show HG01106.hp1 HG01168.hp1 HG03654.hp1 HG03669.hp1 HG03710.hp1 HG03831.hp2 NA19240.hp2	a0001 a0012 a0001 a0012	a0001c0001 a0012c0007 a0001c0001 a0012c0007	a0001c0001t0001 a0012c0007t0001 a0001c0001t0001 a0012c0007t0001	a0001c0001t0001g0175 a0001c0001t0001g0283 a0001c0001t0001g0286 others(4): Show a0001c0001t0001g0175 a0001c0001t0001g0283 a0001c0001t0001g0286 a0001c0001t0001g0306 a0001c0001t0001g0335 a0001c0001t0001g0342 a0012c0007t0001g0273	7	394	0.0178	-12	c.21 others(23): Show c.2124_*2135delCCTCCCACCTGT	CLSTN3	ENSG00000139182.15	transcript	ENST00000266546.11	protein_coding		1260		chr12	TogoVar
CLSTN3_chr12_7125371_7163945	7160258	ACCTGTCC others(5): Show ACCTGTCCTCCCG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0058	1	394	0.0025	-12	c.21 others(23): Show c.2178_*2189delCCTGTCCTCCCG	CLSTN3	ENSG00000139182.15	transcript	ENST00000266546.11	protein_coding		1314		chr12	TogoVar
CLTA_chr9_36185921_36217059	36186646	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0072 a0001c0001t0002g0072	1	400	0.0025	-12	c.-44 others(23): Show c.-4410_-4399delTTTTTTTTTTTT	CLTA	ENSG00000122705.18	transcript	ENST00000345519.10	protein_coding		4274		chr9	TogoVar
CLTA_chr9_36185921_36217059	36214906	TGTTGAGT others(5): Show TGTTGAGTCCTTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0017 a0001c0001t0005g0017	1	400	0.0025	-12	c.31 others(23): Show c.3133_*3144delGTTGAGTCCTTC	CLTA	ENSG00000122705.18	transcript	ENST00000345519.10	protein_coding		2848		chr9	TogoVar
CLTA_chr9_36185921_36217059	36216663	TTATTATT others(5): Show TTATTATTATTTA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp2 HG03239.hp1 HG03490.hp1 HG01123.hp2 HG03239.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0025	3	400	0.0075	-12	c.48 others(23): Show c.4890_*4901delTATTATTATTTA	CLTA	ENSG00000122705.18	transcript	ENST00000345519.10	protein_coding		4605		chr9	TogoVar
CLTCL1_chr22_19174473_19296719	19207010	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03492.hp1 HG03490.hp2 HG03492.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0086 a0001c0004t0007g0087 a0001c0004t0007g0086 a0001c0004t0007g0087	2	346	0.0058	-12	c.360 others(31): Show c.3600+1132_3600+1143delAAAAAAAAAAAA	CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding	22/32			chr22	TogoVar
CLTCL1_chr22_19174473_19296719	19217615	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19070.hp1 NA19070.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0297 a0001c0002t0001g0297	1	346	0.0029	-12	c.292 others(31): Show c.2920-1371_2920-1360delTTTTTTTTTTTT	CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding	18/32			chr22	TogoVar
CLTCL1_chr22_19174473_19296719	19219157	TTTTATTT others(5): Show TTTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02080.hp1 HG02083.hp1 others(12): Show HG00280.hp2 HG02080.hp1 HG02083.hp1 HG03579.hp1 NA18947.hp2 NA18957.hp2 NA18977.hp2 NA18984.hp2 NA18989.hp2 NA19000.hp1 NA19012.hp2 NA19054.hp2 NA19065.hp2 NA19072.hp2 NA19077.hp1	a0001 a0005 a0001 a0005	a0001c0002 a0005c0007 a0001c0002 a0005c0007	a0001c0002t0001 a0001c0002t0003 a0005c0007t0006 a0001c0002t0001 a0001c0002t0003 a0005c0007t0006	a0001c0002t0001g0195 a0001c0002t0003g0041 a0005c0007t0006g0298 others(12): Show a0001c0002t0001g0195 a0001c0002t0003g0041 a0005c0007t0006g0298 a0005c0007t0006g0299 a0005c0007t0006g0300 a0005c0007t0006g0301 a0005c0007t0006g0302 a0005c0007t0006g0303 a0005c0007t0006g0304 a0005c0007t0006g0305 a0005c0007t0006g0306 a0005c0007t0006g0307 a0005c0007t0006g0308 a0005c0007t0006g0309 a0005c0007t0006g0310	15	346	0.0434	-12	c.291 others(29): Show c.2919+716_2919+727delTAAATAAATAAA	CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding	18/32			chr22	TogoVar
CLTCL1_chr22_19174473_19296719	19243693	CTTTCTTT others(5): Show CTTTCTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0157 a0001c0003t0001g0157	1	346	0.0029	-12	c.520 others(27): Show c.520-769_520-758delAAAAAAAAGAAA	CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding	3/32			chr22	TogoVar
CLTC_chr17_59614895_59701956	59617114	TTATATAT others(5): Show TTATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp2 HG02257.hp2 HG02572.hp2 others(5): Show HG01168.hp2 HG02257.hp2 HG02572.hp2 HG02615.hp2 HG02723.hp1 HG03225.hp2 HG03540.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0001 a0001c0001t0003 a0001c0001t0008	a0001c0001t0001g0084 a0001c0001t0003g0016 a0001c0001t0003g0017 others(5): Show a0001c0001t0001g0084 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0008g0003	8	260	0.0308	-12	c.-30 others(23): Show c.-3017_-3006delTATATATATATA	CLTC	ENSG00000141367.13	transcript	ENST00000269122.8	protein_coding		2780		chr17	TogoVar
CLTRN_chrX_15622318_15669805	15630363	AGAAGGAA others(5): Show AGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG00438.hp2 others(89): Show HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00609.hp1 HG00642.hp1 HG00673.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01168.hp2 HG01243.hp1 HG01433.hp1 HG01496.hp1 HG01943.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02148.hp1 HG02165.hp2 HG02258.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02886.hp1 HG02922.hp1 HG03041.hp2 HG03453.hp1 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18940.hp1 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp2 NA18948.hp1 NA18956.hp2 NA18961.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp2 NA18970.hp1 NA18972.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18979.hp2 NA18982.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18997.hp1 NA18998.hp1 NA19001.hp2 NA19054.hp2 NA19056.hp1 NA19057.hp2 NA19060.hp1 NA19063.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19076.hp1 NA19080.hp2 NA19081.hp2 NA19084.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(74): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0042 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0106 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0200 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0255 a0001c0001t0001g0263 a0001c0001t0003g0015 a0001c0001t0003g0108 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0005g0024 a0001c0001t0007g0171 a0001c0001t0009g0181	92	295	0.3119	-12	c.513 others(29): Show c.513-2248_513-2237delCTTCCTTCCTTC	CLTRN	ENSG00000147003.7	transcript	ENST00000380342.4	protein_coding	5/5			chrX	TogoVar

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