Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTNAP2_chr7_146111801_148425998	146263288	AGGAAGGA others(5): Show AGGAAGGAAGGAC	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01891.hp2 HG02486.hp1 others(13): Show HG00735.hp2 HG01891.hp2 HG02486.hp1 HG02630.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02976.hp1 HG03139.hp1 HG03225.hp2 NA18522.hp1 NA18522.hp2 NA19030.hp2 NA20129.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0008 a0001c0013 a0001c0015 a0001c0018 a0001c0019 a0002c0016	a0001c0001t0006 a0001c0001t0007 a0001c0001t0018 others(11): Show a0001c0001t0006 a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0003t0013 a0001c0003t0023 a0001c0004t0003 a0001c0008t0001 a0001c0013t0003 a0001c0015t0001 a0001c0018t0002 a0001c0019t0006 a0002c0016t0004	a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0007g0020 others(13): Show a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0007g0020 a0001c0001t0018g0001 a0001c0002t0001g0008 a0001c0002t0002g0013 a0001c0003t0013g0010 a0001c0003t0023g0030 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0008t0001g0025 a0001c0013t0003g0039 a0001c0015t0001g0011 a0001c0018t0002g0012 a0001c0019t0006g0015 a0002c0016t0004g0024	16	40	0.4000	-12	c.97+ others(31): Show c.97+146327_97+146338delCGGAAGGAAGGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146279429	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0026 a0001c0012t0004g0026	1	40	0.0250	-12	c.97+ others(31): Show c.97+162479_97+162490delACACACACACAC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146285978	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	40	0.0250	-12	c.97+ others(31): Show c.97+169039_97+169050delGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146301749	CACAGTGG others(5): Show CACAGTGGTGCAA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA19030.hp2 HG02451.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0016 a0001c0001 a0002c0016	a0001c0001t0002 a0002c0016t0004 a0001c0001t0002 a0002c0016t0004	a0001c0001t0002g0006 a0002c0016t0004g0024 a0001c0001t0002g0006 a0002c0016t0004g0024	2	40	0.0500	-12	c.97+ others(31): Show c.97+184777_97+184788delACAGTGGTGCAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146303072	ATGTGTGT others(5): Show ATGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	40	0.0250	-12	c.97+ others(31): Show c.97+186124_97+186135delTGTGTGTGTGTG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146319835	GGCTGTGT others(5): Show GGCTGTGTTGTCA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02717.hp1 HG02897.hp1 others(5): Show HG02451.hp2 HG02717.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG03098.hp2 NA20129.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0010 a0002c0017	a0001c0001t0002 a0001c0001t0012 a0001c0002t0001 others(4): Show a0001c0001t0002 a0001c0001t0012 a0001c0002t0001 a0001c0003t0023 a0001c0004t0005 a0001c0010t0002 a0002c0017t0015	a0001c0001t0002g0006 a0001c0001t0012g0034 a0001c0002t0001g0008 others(5): Show a0001c0001t0002g0006 a0001c0001t0012g0034 a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0003t0023g0030 a0001c0004t0005g0004 a0001c0010t0002g0014 a0002c0017t0015g0037	8	40	0.2000	-12	c.97+ others(31): Show c.97+202867_97+202878delTGTTGTCAGCTG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146356052	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02451.hp1 HG02486.hp1 others(7): Show HG00735.hp2 HG02451.hp1 HG02486.hp1 HG02886.hp2 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1 NA20129.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(5): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0011 a0001c0019	a0001c0001t0001 a0001c0001t0007 a0001c0001t0018 others(7): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 a0001c0005t0022 a0001c0006t0009 a0001c0008t0001 a0001c0009t0019 a0001c0011t0016 a0001c0019t0006	a0001c0001t0001g0003 a0001c0001t0007g0020 a0001c0001t0018g0001 others(7): Show a0001c0001t0001g0003 a0001c0001t0007g0020 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0005t0022g0032 a0001c0006t0009g0028 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0019t0006g0015	10	40	0.2500	-12	c.97+ others(31): Show c.97+239110_97+239121delACACACACACAC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146380784	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0021 a0001c0002t0001g0021	1	40	0.0250	-12	c.97+ others(31): Show c.97+263833_97+263844delTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146395826	GGAGAGAG others(5): Show GGAGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02976.hp1 HG03139.hp1 HG02630.hp2 HG02976.hp1 HG03139.hp1	a0001 a0001	a0001c0002 a0001c0008 a0001c0015 a0001c0002 a0001c0008 a0001c0015	a0001c0002t0002 a0001c0008t0001 a0001c0015t0001 a0001c0002t0002 a0001c0008t0001 a0001c0015t0001	a0001c0002t0002g0013 a0001c0008t0001g0025 a0001c0015t0001g0011 a0001c0002t0002g0013 a0001c0008t0001g0025 a0001c0015t0001g0011	3	40	0.0750	-12	c.97+ others(31): Show c.97+278872_97+278883delGAGAGAGAGAGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146457481	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02976.hp1 HG02630.hp2 HG02976.hp1	a0001 a0001	a0001c0002 a0001c0015 a0001c0002 a0001c0015	a0001c0002t0002 a0001c0015t0001 a0001c0002t0002 a0001c0015t0001	a0001c0002t0002g0013 a0001c0015t0001g0011 a0001c0002t0002g0013 a0001c0015t0001g0011	2	40	0.0500	-12	c.98- others(31): Show c.98-316746_98-316735delTATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146469518	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0023 a0001c0003t0023	a0001c0003t0023g0030 a0001c0003t0023g0030	1	40	0.0250	-12	c.98- others(31): Show c.98-304742_98-304731delTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146502224	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02886.hp2 HG00735.hp1 HG02886.hp2	a0001 a0001	a0001c0005 a0001c0006 a0001c0005 a0001c0006	a0001c0005t0022 a0001c0006t0014 a0001c0005t0022 a0001c0006t0014	a0001c0005t0022g0032 a0001c0006t0014g0033 a0001c0005t0022g0032 a0001c0006t0014g0033	2	40	0.0500	-12	c.98- others(31): Show c.98-272022_98-272011delATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146525532	TTATCTAT others(5): Show TTATCTATCTATC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0014 a0001c0006t0014	a0001c0006t0014g0033 a0001c0006t0014g0033	1	40	0.0250	-12	c.98- others(31): Show c.98-248705_98-248694delATCTATCTATCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146525566	ATCTATCT others(5): Show ATCTATCTATCTC	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0034 a0001c0001t0012g0034	1	40	0.0250	-12	c.98- others(31): Show c.98-248694_98-248683delTCTCTATCTATC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146555492	GTCTGTCT others(5): Show GTCTGTCTATCTA	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG03540.hp1 others(1): Show HG02896.hp2 HG02897.hp2 HG03540.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0004 a0002c0016 a0001c0002 a0001c0004 a0002c0016	a0001c0002t0010 a0001c0004t0003 a0002c0016t0004 a0001c0002t0010 a0001c0004t0003 a0002c0016t0004	a0001c0002t0010g0002 a0001c0004t0003g0035 a0001c0004t0003g0036 others(1): Show a0001c0002t0010g0002 a0001c0004t0003g0035 a0001c0004t0003g0036 a0002c0016t0004g0024	4	40	0.1000	-12	c.98- others(31): Show c.98-218775_98-218764delGTCTATCTATCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146596595	CAGAGAGA others(5): Show CAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02486.hp2 HG02630.hp1 others(1): Show HG01891.hp1 HG02486.hp2 HG02630.hp1 HG02717.hp2	a0001 a0004 a0001 a0004	a0001c0003 a0001c0005 a0001c0012 others(1): Show a0001c0003 a0001c0005 a0001c0012 a0004c0014	a0001c0003t0011 a0001c0005t0008 a0001c0012t0004 others(1): Show a0001c0003t0011 a0001c0005t0008 a0001c0012t0004 a0004c0014t0021	a0001c0003t0011g0023 a0001c0005t0008g0005 a0001c0012t0004g0026 others(1): Show a0001c0003t0011g0023 a0001c0005t0008g0005 a0001c0012t0004g0026 a0004c0014t0021g0022	4	40	0.1000	-12	c.98- others(31): Show c.98-177642_98-177631delGAGAGAGAGAGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146613824	GTTCTTTC others(5): Show GTTCTTTCAGCTT	G G	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01891.hp1 HG02486.hp1 others(13): Show HG00735.hp2 HG01891.hp1 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02717.hp1 HG02717.hp2 HG02897.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 NA18522.hp1 NA19030.hp1 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0011 a0001c0012 a0001c0013 a0001c0018 a0001c0019 a0002c0017 a0003c0007 a0004c0014	a0001c0001t0001 a0001c0001t0007 a0001c0001t0018 others(13): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0003t0011 a0001c0005t0008 a0001c0006t0009 a0001c0011t0016 a0001c0012t0004 a0001c0013t0003 a0001c0018t0002 a0001c0019t0006 a0002c0017t0015 a0003c0007t0017 a0004c0014t0021	a0001c0001t0001g0038 a0001c0001t0007g0020 a0001c0001t0018g0001 others(13): Show a0001c0001t0001g0038 a0001c0001t0007g0020 a0001c0001t0018g0001 a0001c0002t0001g0008 a0001c0002t0002g0040 a0001c0003t0011g0023 a0001c0005t0008g0005 a0001c0006t0009g0028 a0001c0011t0016g0019 a0001c0012t0004g0026 a0001c0013t0003g0039 a0001c0018t0002g0012 a0001c0019t0006g0015 a0002c0017t0015g0037 a0003c0007t0017g0031 a0004c0014t0021g0022	16	40	0.4000	-12	c.98- others(31): Show c.98-160438_98-160427delGCTTTTCTTTCA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146622243	ATATCTAT others(5): Show ATATCTATCTATC	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02896.hp2 HG02897.hp2 others(5): Show HG02451.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG03239.hp2 NA18522.hp2 NA19030.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0002c0016	a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 others(4): Show a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 a0001c0004t0003 a0001c0004t0005 a0001c0006t0009 a0002c0016t0004	a0001c0001t0002g0006 a0001c0001t0007g0018 a0001c0002t0002g0040 others(5): Show a0001c0001t0002g0006 a0001c0001t0007g0018 a0001c0002t0002g0040 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0006t0009g0028 a0002c0016t0004g0024	8	40	0.2000	-12	c.98- others(31): Show c.98-152000_98-151989delCTATCTATCTAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146622271	CTATCTAT others(5): Show CTATCTATCTATA	C C	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0005 a0005	a0005c0020 a0005c0020	a0005c0020t0005 a0005c0020t0005	a0005c0020t0005g0016 a0005c0020t0005g0016	1	40	0.0250	-12	c.98- others(31): Show c.98-151996_98-151985delCTATCTATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146712106	TTATGTAT others(5): Show TTATGTATACATA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02630.hp2 HG02976.hp1 others(2): Show HG02451.hp1 HG02630.hp2 HG02976.hp1 HG03139.hp1 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0008 a0001c0010 others(1): Show a0001c0002 a0001c0008 a0001c0010 a0001c0015	a0001c0002t0001 a0001c0002t0002 a0001c0008t0001 others(2): Show a0001c0002t0001 a0001c0002t0002 a0001c0008t0001 a0001c0010t0002 a0001c0015t0001	a0001c0002t0001g0007 a0001c0002t0002g0013 a0001c0008t0001g0025 others(2): Show a0001c0002t0001g0007 a0001c0002t0002g0013 a0001c0008t0001g0025 a0001c0010t0002g0014 a0001c0015t0001g0011	5	40	0.1250	-12	c.98- others(29): Show c.98-62151_98-62140delATGTATACATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146761284	TGGAAGGA others(5): Show TGGAAGGAAGGAA	T T	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0023 a0001c0003t0023	a0001c0003t0023g0030 a0001c0003t0023g0030	1	40	0.0250	-12	c.98- others(29): Show c.98-12946_98-12935delGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146855807	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02922.hp2 NA20129.hp2 HG02630.hp2 HG02922.hp2 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 a0001c0002 a0001c0003 a0001c0004	a0001c0002t0002 a0001c0003t0023 a0001c0004t0005 a0001c0002t0002 a0001c0003t0023 a0001c0004t0005	a0001c0002t0002g0013 a0001c0003t0023g0030 a0001c0004t0005g0004 a0001c0002t0002g0013 a0001c0003t0023g0030 a0001c0004t0005g0004	3	40	0.0750	-12	c.402 others(31): Show c.402+15938_402+15949delTATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146856261	TATAGATA others(5): Show TATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02486.hp1 HG02486.hp2 others(4): Show HG00735.hp2 HG02486.hp1 HG02486.hp2 HG02630.hp2 HG02922.hp1 HG03540.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0019	a0001c0001t0007 a0001c0001t0012 a0001c0001t0018 others(4): Show a0001c0001t0007 a0001c0001t0012 a0001c0001t0018 a0001c0002t0002 a0001c0002t0010 a0001c0003t0011 a0001c0019t0006	a0001c0001t0007g0020 a0001c0001t0012g0034 a0001c0001t0018g0001 others(4): Show a0001c0001t0007g0020 a0001c0001t0012g0034 a0001c0001t0018g0001 a0001c0002t0002g0013 a0001c0002t0010g0002 a0001c0003t0011g0023 a0001c0019t0006g0015	7	40	0.1750	-12	c.402 others(31): Show c.402+16385_402+16396delGATAGATAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146856297	GATACATA others(5): Show GATACATACATAC	G G	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG03540.hp2 HG02897.hp1 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0004 a0001c0002t0001 a0001c0003t0004	a0001c0002t0001g0008 a0001c0003t0004g0029 a0001c0002t0001g0008 a0001c0003t0004g0029	2	40	0.0500	-12	c.402 others(31): Show c.402+16429_402+16440delCATACATACATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146885928	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0007 a0001c0002t0001g0007	1	40	0.0250	-12	c.402 others(31): Show c.402+46059_402+46070delGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147062127	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0040 a0001c0002t0002g0040	1	40	0.0250	-12	c.550 others(31): Show c.550+18105_550+18116delAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147081583	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0026 a0001c0012t0004g0026	1	40	0.0250	-12	c.551 others(31): Show c.551-26530_551-26519delGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147083940	TTATATAG others(5): Show TTATATAGCATTA	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01891.hp1 HG01891.hp2 others(3): Show HG00735.hp1 HG01891.hp1 HG01891.hp2 HG03139.hp2 HG03225.hp2 HG03239.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0006 a0001c0011 others(3): Show a0001c0001 a0001c0006 a0001c0011 a0001c0018 a0003c0007 a0004c0014	a0001c0001t0006 a0001c0006t0014 a0001c0011t0016 others(3): Show a0001c0001t0006 a0001c0006t0014 a0001c0011t0016 a0001c0018t0002 a0003c0007t0017 a0004c0014t0021	a0001c0001t0006g0009 a0001c0006t0014g0033 a0001c0011t0016g0019 others(3): Show a0001c0001t0006g0009 a0001c0006t0014g0033 a0001c0011t0016g0019 a0001c0018t0002g0012 a0003c0007t0017g0031 a0004c0014t0021g0022	6	40	0.1500	-12	c.551 others(31): Show c.551-24189_551-24178delAGCATTATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147104873	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0006 a0001c0019t0006	a0001c0019t0006g0015 a0001c0019t0006g0015	1	40	0.0250	-12	c.551 others(29): Show c.551-3241_551-3230delATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147137905	ATAGATAG others(5): Show ATAGATAGATAGG	A A	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0020 a0001c0003t0020	a0001c0003t0020g0017 a0001c0003t0020g0017	1	40	0.0250	-12	c.134 others(31): Show c.1348+5407_1348+5418delGGTAGATAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147225742	AGAAGGAA others(5): Show AGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02630.hp2 HG02896.hp2 others(12): Show HG01891.hp2 HG02630.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG03139.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03540.hp1 NA18522.hp1 NA18522.hp2 NA19030.hp1 NA20129.hp2 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0008 a0001c0009 a0001c0010 a0001c0013 a0001c0018 a0003c0007	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(11): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 a0001c0002t0002 a0001c0002t0010 a0001c0003t0023 a0001c0004t0003 a0001c0008t0001 a0001c0009t0019 a0001c0010t0002 a0001c0013t0003 a0001c0018t0002 a0003c0007t0017	a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0018 others(12): Show a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0002t0001g0008 a0001c0002t0002g0013 a0001c0002t0010g0002 a0001c0003t0023g0030 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0010t0002g0014 a0001c0013t0003g0039 a0001c0018t0002g0012 a0003c0007t0017g0031	15	40	0.3750	-12	c.134 others(33): Show c.1349-74351_1349-74340delGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147237049	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0002 a0001c0018t0002	a0001c0018t0002g0012 a0001c0018t0002g0012	1	40	0.0250	-12	c.134 others(33): Show c.1349-63067_1349-63056delTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147301588	CTCTCTGT others(5): Show CTCTCTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03239.hp1 HG02886.hp1 HG03239.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0003c0007 a0001c0003 a0003c0007	a0001c0003t0013 a0003c0007t0017 a0001c0003t0013 a0003c0007t0017	a0001c0003t0013g0010 a0003c0007t0017g0031 a0001c0003t0013g0010 a0003c0007t0017g0031	2	40	0.0500	-12	c.149 others(31): Show c.1498+1300_1498+1311delCTCTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147301592	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0023 a0001c0003t0023	a0001c0003t0023g0030 a0001c0003t0023g0030	1	40	0.0250	-12	c.149 others(31): Show c.1498+1344_1498+1355delGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147482720	CAATAAAT others(5): Show CAATAAATAAATA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp1 HG02922.hp1 others(3): Show HG02451.hp2 HG02897.hp1 HG02922.hp1 HG02976.hp1 HG03225.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 others(1): Show a0001c0001 a0001c0002 a0001c0009 a0001c0015	a0001c0001t0002 a0001c0001t0012 a0001c0002t0001 others(3): Show a0001c0001t0002 a0001c0001t0012 a0001c0002t0001 a0001c0002t0010 a0001c0009t0019 a0001c0015t0001	a0001c0001t0002g0006 a0001c0001t0012g0034 a0001c0002t0001g0008 others(3): Show a0001c0001t0002g0006 a0001c0001t0012g0034 a0001c0002t0001g0008 a0001c0002t0010g0002 a0001c0009t0019g0027 a0001c0015t0001g0011	6	40	0.1500	-12	c.167 others(31): Show c.1671-3185_1671-3174delATAAATAAATAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	10/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147558697	TTTCCTTC others(5): Show TTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02717.hp1 NA19030.hp2 HG02486.hp1 HG02717.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0016 a0002c0017 a0001c0001 a0002c0016 a0002c0017	a0001c0001t0007 a0002c0016t0004 a0002c0017t0015 a0001c0001t0007 a0002c0016t0004 a0002c0017t0015	a0001c0001t0007g0020 a0002c0016t0004g0024 a0002c0017t0015g0037 a0001c0001t0007g0020 a0002c0016t0004g0024 a0002c0017t0015g0037	3	40	0.0750	-12	c.177 others(31): Show c.1778-3406_1778-3395delCCTTCCTTCCTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147572701	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02451.hp1 HG02451.hp2 others(19): Show HG01891.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02630.hp1 HG02717.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03239.hp2 NA18522.hp2 NA19030.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0011 a0001c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0003t0011 a0001c0003t0023 a0001c0004t0003 a0001c0004t0005 a0001c0005t0008 a0001c0005t0022 a0001c0006t0009 a0001c0008t0001 a0001c0009t0019 a0001c0011t0016 a0001c0012t0004	a0001c0001t0001g0003 a0001c0001t0001g0038 a0001c0001t0002g0006 others(19): Show a0001c0001t0001g0003 a0001c0001t0001g0038 a0001c0001t0002g0006 a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0002g0040 a0001c0003t0011g0023 a0001c0003t0023g0030 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0006t0009g0028 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0012t0004g0026	22	40	0.5500	-12	c.189 others(33): Show c.1897+10466_1897+10477delCACACACACACA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147575371	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0019 a0001c0009t0019	a0001c0009t0019g0027 a0001c0009t0019g0027	1	40	0.0250	-12	c.189 others(33): Show c.1897+13137_1897+13148delGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147615277	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02896.hp1 HG03098.hp2 HG01891.hp1 HG02896.hp1 HG03098.hp2	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0002 a0004c0014 a0005c0020 a0001c0002 a0004c0014 a0005c0020	a0001c0002t0001 a0004c0014t0021 a0005c0020t0005 a0001c0002t0001 a0004c0014t0021 a0005c0020t0005	a0001c0002t0001g0021 a0004c0014t0021g0022 a0005c0020t0005g0016 a0001c0002t0001g0021 a0004c0014t0021g0022 a0005c0020t0005g0016	3	40	0.0750	-12	c.189 others(33): Show c.1898-23807_1898-23796delAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147772446	CTATATAT others(5): Show CTATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02630.hp1 HG03225.hp1 others(1): Show HG02451.hp2 HG02630.hp1 HG03225.hp1 HG03239.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0009 a0001c0012 others(1): Show a0001c0001 a0001c0009 a0001c0012 a0003c0007	a0001c0001t0002 a0001c0009t0019 a0001c0012t0004 others(1): Show a0001c0001t0002 a0001c0009t0019 a0001c0012t0004 a0003c0007t0017	a0001c0001t0002g0006 a0001c0009t0019g0027 a0001c0012t0004g0026 others(1): Show a0001c0001t0002g0006 a0001c0009t0019g0027 a0001c0012t0004g0026 a0003c0007t0017g0031	4	40	0.1000	-12	c.209 others(35): Show c.2099-131092_2099-131081delTATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147775392	AATATATA others(5): Show AATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0006 a0001c0019t0006	a0001c0019t0006g0015 a0001c0019t0006g0015	1	40	0.0250	-12	c.209 others(35): Show c.2099-128150_2099-128139delTTATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147784381	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0017 a0003c0007t0017	a0003c0007t0017g0031 a0003c0007t0017g0031	1	40	0.0250	-12	c.209 others(35): Show c.2099-119169_2099-119158delATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147894957	CTTTCTTT others(5): Show CTTTCTTTCTTTT	C C	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 NA18522.hp2 HG02896.hp2 HG02897.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0007 a0001c0004t0003 a0001c0001t0007 a0001c0004t0003	a0001c0001t0007g0018 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0001t0007g0018 a0001c0004t0003g0035 a0001c0004t0003g0036	3	40	0.0750	-12	c.209 others(31): Show c.2099-8604_2099-8593delCTTTCTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147902802	GTGTGTGT others(5): Show GTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0001 a0001c0001t0018g0001	1	40	0.0250	-12	c.209 others(29): Show c.2099-751_2099-740delATGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147925154	AGAAGGAA others(5): Show AGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0020 a0001c0001t0007g0020	1	40	0.0250	-12	c.225 others(33): Show c.2255+21477_2255+21488delGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147933494	GAGATAGA others(5): Show GAGATAGATAGAT	G G	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0009 a0001c0006t0009	a0001c0006t0009g0028 a0001c0006t0009g0028	1	40	0.0250	-12	c.225 others(33): Show c.2255+29811_2255+29822delGATAGATAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147957877	CCAGTCTG others(5): Show CCAGTCTGGACAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02896.hp2 HG02897.hp2 others(1): Show HG01891.hp2 HG02896.hp2 HG02897.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0006 a0001c0001t0007 a0001c0004t0003 a0001c0001t0006 a0001c0001t0007 a0001c0004t0003	a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0004t0003g0035 others(1): Show a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0004t0003g0035 a0001c0004t0003g0036	4	40	0.1000	-12	c.225 others(33): Show c.2256-19982_2256-19971delGTCTGGACAACA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148061878	TATAGATA others(5): Show TATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02717.hp2 HG03098.hp2 others(4): Show HG02630.hp2 HG02717.hp2 HG03098.hp2 HG03139.hp1 NA18522.hp2 NA19030.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0008 a0002c0016	a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 others(4): Show a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0005t0008 a0001c0008t0001 a0002c0016t0004	a0001c0001t0007g0018 a0001c0001t0018g0001 a0001c0002t0001g0021 others(4): Show a0001c0001t0007g0018 a0001c0001t0018g0001 a0001c0002t0001g0021 a0001c0002t0002g0013 a0001c0005t0008g0005 a0001c0008t0001g0025 a0002c0016t0004g0024	7	40	0.1750	-12	c.238 others(33): Show c.2384-56216_2384-56205delGATAGATAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148061954	TATAGATA others(5): Show TATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG03540.hp1 NA21309.hp2 HG00735.hp1 HG03540.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0018 a0001c0002t0010 a0001c0006t0014 a0001c0001t0018 a0001c0002t0010 a0001c0006t0014	a0001c0001t0018g0001 a0001c0002t0010g0002 a0001c0006t0014g0033 a0001c0001t0018g0001 a0001c0002t0010g0002 a0001c0006t0014g0033	3	40	0.0750	-12	c.238 others(33): Show c.2384-56121_2384-56110delAGATAGATAGAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148099421	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0014 a0001c0006t0014	a0001c0006t0014g0033 a0001c0006t0014g0033	1	40	0.0250	-12	c.238 others(33): Show c.2384-18669_2384-18658delGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar

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