Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	external
CSMD1_chr8_2930361_4999914	4446755	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG01071.hp1 others(18): Show HG00423.hp2 HG00438.hp2 HG01071.hp1 HG01255.hp1 HG02056.hp2 HG02074.hp1 HG02257.hp1 HG02451.hp1 HG02615.hp1 HG02723.hp2 HG02965.hp1 HG03195.hp1 HG03225.hp1 HG03516.hp2 HG03540.hp1 HG03710.hp1 HG04204.hp1 NA18906.hp2 NA18982.hp2 NA18995.hp2 NA19043.hp2	a0001 a0002 a0005 others(7): Show a0001 a0002 a0005 a0007 a0008 a0017 a0026 a0030 a0034 a0039	a0001c0005 a0001c0006 a0001c0017 others(18): Show a0001c0005 a0001c0006 a0001c0017 a0001c0050 a0001c0071 a0001c0079 a0001c0081 a0002c0015 a0002c0031 a0002c0041 a0002c0051 a0002c0054 a0002c0089 a0005c0065 a0007c0088 a0008c0067 a0017c0106 a0026c0082 a0030c0052 a0034c0055 a0039c0009	a0001c0005t0002 a0001c0006t0060 a0001c0017t0005 others(18): Show a0001c0005t0002 a0001c0006t0060 a0001c0017t0005 a0001c0050t0053 a0001c0071t0069 a0001c0079t0072 a0001c0081t0037 a0002c0015t0021 a0002c0031t0015 a0002c0041t0027 a0002c0051t0006 a0002c0054t0079 a0002c0089t0001 a0005c0065t0023 a0007c0088t0076 a0008c0067t0059 a0017c0106t0012 a0026c0082t0052 a0030c0052t0049 a0034c0055t0034 a0039c0009t0001	a0001c0005t0002g0111 a0001c0006t0060g0103 a0001c0017t0005g0003 others(18): Show a0001c0005t0002g0111 a0001c0006t0060g0103 a0001c0017t0005g0003 a0001c0050t0053g0120 a0001c0071t0069g0115 a0001c0079t0072g0113 a0001c0081t0037g0030 a0002c0015t0021g0008 a0002c0031t0015g0001 a0002c0041t0027g0018 a0002c0051t0006g0081 a0002c0054t0079g0096 a0002c0089t0001g0037 a0005c0065t0023g0050 a0007c0088t0076g0057 a0008c0067t0059g0079 a0017c0106t0012g0042 a0026c0082t0052g0097 a0030c0052t0049g0098 a0034c0055t0034g0047 a0039c0009t0001g0002	21	126	0.1667	-12	c.303 others(31): Show c.303-26702_303-26691delCACACACACACA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	2/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4510545	ATCTTCCC others(5): Show ATCTTCCCTTCCC	A A	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0005 a0005	a0005c0065 a0005c0065	a0005c0065t0023 a0005c0065t0023	a0005c0065t0023g0050 a0005c0065t0023g0050	1	126	0.0079	-12	c.303 others(31): Show c.303-90492_303-90481delGGGAAGGGAAGA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	2/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4519742	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0109 a0001c0006t0002g0109	1	126	0.0079	-12	c.303 others(31): Show c.303-99689_303-99678delTTTTTTTTTTTT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	2/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4565749	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0039 a0039	a0039c0009 a0039c0009	a0039c0009t0001 a0039c0009t0001	a0039c0009t0001g0002 a0039c0009t0001g0002	1	126	0.0079	-12	c.302 others(31): Show c.302+71581_302+71592delATATATATATAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	2/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4668415	CATTATTA others(5): Show CATTATTATTATT	C C	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0018 a0018	a0018c0044 a0018c0044	a0018c0044t0064 a0018c0044t0064	a0018c0044t0064g0085 a0018c0044t0064g0085	1	126	0.0079	-12	c.86- others(29): Show c.86-30869_86-30858delAATAATAATAAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4682955	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG02257.hp2 HG02451.hp2 others(3): Show HG01071.hp2 HG02257.hp2 HG02451.hp2 HG02572.hp2 HG03098.hp2 HG03209.hp2	a0001 a0002 a0007 others(2): Show a0001 a0002 a0007 a0011 a0029	a0001c0047 a0002c0060 a0002c0075 others(3): Show a0001c0047 a0002c0060 a0002c0075 a0007c0029 a0011c0110 a0029c0028	a0001c0047t0014 a0002c0060t0006 a0002c0075t0026 others(3): Show a0001c0047t0014 a0002c0060t0006 a0002c0075t0026 a0007c0029t0011 a0011c0110t0074 a0029c0028t0024	a0001c0047t0014g0024 a0002c0060t0006g0094 a0002c0075t0026g0051 others(3): Show a0001c0047t0014g0024 a0002c0060t0006g0094 a0002c0075t0026g0051 a0007c0029t0011g0054 a0011c0110t0074g0082 a0029c0028t0024g0040	6	126	0.0476	-12	c.86- others(29): Show c.86-45409_86-45398delATATATATATAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4698903	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0083 a0001c0002t0002g0083	1	126	0.0079	-12	c.86- others(29): Show c.86-61357_86-61346delGTGTGTGTGTGT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4717559	TATCTATC others(5): Show TATCTATCCATCC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG03540.hp1 HG00438.hp1 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0094 a0002c0015 a0001c0094 a0002c0015	a0001c0094t0002 a0002c0015t0021 a0001c0094t0002 a0002c0015t0021	a0001c0094t0002g0110 a0002c0015t0021g0008 a0001c0094t0002g0110 a0002c0015t0021g0008	2	126	0.0159	-12	c.86- others(29): Show c.86-80013_86-80002delGGATGGATAGAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4742000	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03516.hp2 HG03195.hp1 HG03516.hp2	a0002 a0017 a0002 a0017	a0002c0054 a0017c0106 a0002c0054 a0017c0106	a0002c0054t0079 a0017c0106t0012 a0002c0054t0079 a0017c0106t0012	a0002c0054t0079g0096 a0017c0106t0012g0042 a0002c0054t0079g0096 a0017c0106t0012g0042	2	126	0.0159	-12	c.86- others(31): Show c.86-104454_86-104443delAAAAAAAAAAAA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4753403	CCACACAC others(5): Show CCACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG01074.hp2 others(12): Show HG00423.hp1 HG00438.hp1 HG01074.hp2 HG01081.hp2 HG01123.hp1 HG01243.hp2 HG02056.hp1 HG02074.hp1 HG02129.hp1 HG02486.hp2 HG03130.hp1 HG03834.hp1 NA18971.hp2 NA18979.hp2 NA18982.hp2	a0001 a0002 a0004 others(5): Show a0001 a0002 a0004 a0005 a0008 a0023 a0025 a0035	a0001c0002 a0001c0005 a0001c0026 others(12): Show a0001c0002 a0001c0005 a0001c0026 a0001c0079 a0001c0080 a0001c0094 a0001c0103 a0002c0070 a0004c0056 a0004c0087 a0005c0107 a0008c0008 a0023c0095 a0025c0096 a0035c0098	a0001c0002t0002 a0001c0005t0002 a0001c0026t0006 others(12): Show a0001c0002t0002 a0001c0005t0002 a0001c0026t0006 a0001c0079t0072 a0001c0080t0040 a0001c0094t0002 a0001c0103t0033 a0002c0070t0046 a0004c0056t0062 a0004c0087t0001 a0005c0107t0068 a0008c0008t0082 a0023c0095t0002 a0025c0096t0067 a0035c0098t0025	a0001c0002t0002g0083 a0001c0005t0002g0111 a0001c0026t0006g0093 others(12): Show a0001c0002t0002g0083 a0001c0005t0002g0111 a0001c0026t0006g0093 a0001c0079t0072g0113 a0001c0080t0040g0025 a0001c0094t0002g0110 a0001c0103t0033g0028 a0002c0070t0046g0092 a0004c0056t0062g0072 a0004c0087t0001g0022 a0005c0107t0068g0073 a0008c0008t0082g0126 a0023c0095t0002g0124 a0025c0096t0067g0116 a0035c0098t0025g0019	15	126	0.1191	-12	c.86- others(31): Show c.86-115857_86-115846delTGTGTGTGTGTG	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4761836	CATCTATC others(5): Show CATCTATCTATCT	C C	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0002 a0002	a0002c0035 a0002c0035	a0002c0035t0047 a0002c0035t0047	a0002c0035t0047g0076 a0002c0035t0047g0076	1	126	0.0079	-12	c.86- others(31): Show c.86-124290_86-124279delAGATAGATAGAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4761890	CCTACCTA others(5): Show CCTACCTATCTAT	C C	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0061 a0001c0002t0061	a0001c0002t0061g0069 a0001c0002t0061g0069	1	126	0.0079	-12	c.86- others(31): Show c.86-124344_86-124333delATAGATAGGTAG	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4761900	TATCTATC others(5): Show TATCTATCTATCA	T T	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01934.hp2 HG04228.hp1 others(3): Show HG01071.hp1 HG01934.hp2 HG04228.hp1 NA18979.hp1 NA19060.hp2 NA19090.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0102 a0002c0036 others(3): Show a0001c0001 a0001c0102 a0002c0036 a0002c0041 a0002c0048 a0004c0099	a0001c0001t0002 a0001c0102t0005 a0002c0036t0029 others(3): Show a0001c0001t0002 a0001c0102t0005 a0002c0036t0029 a0002c0041t0027 a0002c0048t0013 a0004c0099t0014	a0001c0001t0002g0125 a0001c0102t0005g0034 a0002c0036t0029g0009 others(3): Show a0001c0001t0002g0125 a0001c0102t0005g0034 a0002c0036t0029g0009 a0002c0041t0027g0018 a0002c0048t0013g0015 a0004c0099t0014g0020	6	126	0.0476	-12	c.86- others(31): Show c.86-124354_86-124343delTGATAGATAGAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4764872	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG06807.hp2 HG03579.hp2 HG06807.hp2	a0001 a0020 a0001 a0020	a0001c0068 a0020c0024 a0001c0068 a0020c0024	a0001c0068t0015 a0020c0024t0077 a0001c0068t0015 a0020c0024t0077	a0001c0068t0015g0049 a0020c0024t0077g0104 a0001c0068t0015g0049 a0020c0024t0077g0104	2	126	0.0159	-12	c.86- others(31): Show c.86-127326_86-127315delTTTTTTTTTTTT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4791059	GGAGAGAG others(5): Show GGAGAGAGACGGT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00735.hp2 HG01071.hp2 others(11): Show HG00438.hp2 HG00735.hp2 HG01071.hp2 HG01934.hp1 HG02055.hp1 HG02257.hp2 HG02683.hp2 HG02723.hp2 HG03017.hp1 HG03130.hp1 HG03669.hp2 HG03710.hp2 NA19030.hp1 NA20129.hp2	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0006 a0022	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0019 a0001c0026 a0001c0047 a0001c0073 a0001c0081 a0001c0111 a0002c0037 a0002c0075 a0005c0065 a0006c0083 a0022c0013	a0001c0001t0039 a0001c0002t0061 a0001c0003t0019 others(11): Show a0001c0001t0039 a0001c0002t0061 a0001c0003t0019 a0001c0019t0078 a0001c0026t0006 a0001c0047t0014 a0001c0073t0007 a0001c0081t0037 a0001c0111t0045 a0002c0037t0009 a0002c0075t0026 a0005c0065t0023 a0006c0083t0004 a0022c0013t0007	a0001c0001t0039g0017 a0001c0002t0061g0069 a0001c0003t0019g0107 others(11): Show a0001c0001t0039g0017 a0001c0002t0061g0069 a0001c0003t0019g0107 a0001c0019t0078g0105 a0001c0026t0006g0093 a0001c0047t0014g0024 a0001c0073t0007g0108 a0001c0081t0037g0030 a0001c0111t0045g0063 a0002c0037t0009g0046 a0002c0075t0026g0051 a0005c0065t0023g0050 a0006c0083t0004g0006 a0022c0013t0007g0112	14	126	0.1111	-12	c.86- others(31): Show c.86-153513_86-153502delACCGTCTCTCTC	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4795252	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02258.hp2 HG02074.hp2 HG02258.hp2	a0001 a0002 a0001 a0002	a0001c0115 a0002c0091 a0001c0115 a0002c0091	a0001c0115t0042 a0002c0091t0002 a0001c0115t0042 a0002c0091t0002	a0001c0115t0042g0055 a0002c0091t0002g0114 a0001c0115t0042g0055 a0002c0091t0002g0114	2	126	0.0159	-12	c.86- others(31): Show c.86-157706_86-157695delAAAAAAAAAAAA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD1_chr8_2930361_4999914	4903009	TAATAAAT others(5): Show TAATAAATAAATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00423.hp2 HG00438.hp1 others(34): Show HG00099.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG01071.hp1 HG01081.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01261.hp1 HG01261.hp2 HG01884.hp1 HG01934.hp1 HG01934.hp2 HG02074.hp1 HG02129.hp1 HG02129.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02922.hp1 HG02965.hp2 HG03139.hp1 HG03195.hp1 HG03540.hp2 HG03710.hp1 HG03834.hp2 HG04228.hp2 NA18971.hp1 NA18971.hp2 NA18983.hp2 NA18995.hp1 NA19060.hp2 NA20129.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0004 a0009 a0010 a0014 a0015 a0016 a0019 a0023 a0028 a0035 a0038	a0001c0003 a0001c0004 a0001c0006 others(34): Show a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0021 a0001c0040 a0001c0046 a0001c0049 a0001c0079 a0001c0081 a0001c0094 a0001c0103 a0001c0105 a0001c0108 a0001c0109 a0002c0012 a0002c0031 a0002c0041 a0002c0048 a0002c0051 a0002c0054 a0002c0070 a0002c0074 a0002c0077 a0002c0089 a0003c0058 a0004c0099 a0009c0113 a0010c0112 a0014c0010 a0015c0062 a0016c0063 a0019c0018 a0023c0095 a0028c0097 a0035c0098 a0038c0066	a0001c0003t0019 a0001c0004t0020 a0001c0006t0060 others(34): Show a0001c0003t0019 a0001c0004t0020 a0001c0006t0060 a0001c0007t0032 a0001c0021t0005 a0001c0040t0019 a0001c0046t0073 a0001c0049t0002 a0001c0079t0072 a0001c0081t0037 a0001c0094t0002 a0001c0103t0033 a0001c0105t0001 a0001c0108t0054 a0001c0109t0038 a0002c0012t0017 a0002c0031t0015 a0002c0041t0027 a0002c0048t0013 a0002c0051t0006 a0002c0054t0079 a0002c0070t0046 a0002c0074t0041 a0002c0077t0001 a0002c0089t0001 a0003c0058t0057 a0004c0099t0014 a0009c0113t0011 a0010c0112t0081 a0014c0010t0070 a0015c0062t0056 a0016c0063t0010 a0019c0018t0058 a0023c0095t0002 a0028c0097t0018 a0035c0098t0025 a0038c0066t0010	a0001c0003t0019g0107 a0001c0004t0020g0086 a0001c0006t0060g0103 others(34): Show a0001c0003t0019g0107 a0001c0004t0020g0086 a0001c0006t0060g0103 a0001c0007t0032g0033 a0001c0021t0005g0012 a0001c0040t0019g0123 a0001c0046t0073g0091 a0001c0049t0002g0071 a0001c0079t0072g0113 a0001c0081t0037g0030 a0001c0094t0002g0110 a0001c0103t0033g0028 a0001c0105t0001g0029 a0001c0108t0054g0074 a0001c0109t0038g0013 a0002c0012t0017g0088 a0002c0031t0015g0001 a0002c0041t0027g0018 a0002c0048t0013g0015 a0002c0051t0006g0081 a0002c0054t0079g0096 a0002c0070t0046g0092 a0002c0074t0041g0031 a0002c0077t0001g0016 a0002c0089t0001g0037 a0003c0058t0057g0117 a0004c0099t0014g0020 a0009c0113t0011g0043 a0010c0112t0081g0090 a0014c0010t0070g0084 a0015c0062t0056g0062 a0016c0063t0010g0045 a0019c0018t0058g0068 a0023c0095t0002g0124 a0028c0097t0018g0089 a0035c0098t0025g0019 a0038c0066t0010g0032	37	126	0.2937	-12	c.85+ others(29): Show c.85+91311_85+91322delTATTTATTTATT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69		chr8	TogoVar
CSMD2_chr1_33508998_34170230	33557617	GACACACA others(5): Show GACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01071.hp2 HG02055.hp2 others(6): Show HG01069.hp2 HG01071.hp2 HG02055.hp2 HG02809.hp2 HG02922.hp1 HG02965.hp2 HG03139.hp1 HG03225.hp1 HG03225.hp2	a0001 a0003 a0006 others(2): Show a0001 a0003 a0006 a0008 a0027	a0001c0026 a0001c0045 a0003c0004 others(5): Show a0001c0026 a0001c0045 a0003c0004 a0003c0048 a0003c0050 a0006c0016 a0008c0021 a0027c0018	a0001c0026t0003 a0001c0045t0013 a0003c0004t0003 others(5): Show a0001c0026t0003 a0001c0045t0013 a0003c0004t0003 a0003c0048t0006 a0003c0050t0004 a0006c0016t0004 a0008c0021t0004 a0027c0018t0001	a0001c0026t0003g0035 a0001c0045t0013g0027 a0003c0004t0003g0053 others(6): Show a0001c0026t0003g0035 a0001c0045t0013g0027 a0003c0004t0003g0053 a0003c0004t0003g0054 a0003c0048t0006g0032 a0003c0050t0004g0037 a0006c0016t0004g0034 a0008c0021t0004g0023 a0027c0018t0001g0048	9	66	0.1364	-12	c.874 others(29): Show c.8743+105_8743+116delGTGTGTGTGTGT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	55/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33643889	TGAAGGAA others(5): Show TGAAGGAAGGAAG	T T	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0031 a0031	a0031c0007 a0031c0007	a0031c0007t0002 a0031c0007t0002	a0031c0007t0002g0002 a0031c0007t0002g0002	1	66	0.0152	-12	c.477 others(31): Show c.4774+2747_4774+2758delCTTCCTTCCTTC	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	29/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33691106	AAGGCCCT others(5): Show AAGGCCCTGAGCT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0002 a0002	a0002c0027 a0002c0027	a0002c0027t0003 a0002c0027t0003	a0002c0027t0003g0045 a0002c0027t0003g0045	1	66	0.0152	-12	c.405 others(31): Show c.4052+1812_4052+1823delAGCTCAGGGCCT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	25/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33707689	GCGCGCGC others(5): Show GCGCGCGCACACA	G G	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG02055.hp2 HG03139.hp1 HG01071.hp2 HG02055.hp2 HG03139.hp1	a0003 a0006 a0003 a0006	a0003c0004 a0003c0050 a0006c0016 a0003c0004 a0003c0050 a0006c0016	a0003c0004t0003 a0003c0050t0004 a0006c0016t0004 a0003c0004t0003 a0003c0050t0004 a0006c0016t0004	a0003c0004t0003g0054 a0003c0050t0004g0037 a0006c0016t0004g0034 a0003c0004t0003g0054 a0003c0050t0004g0037 a0006c0016t0004g0034	3	66	0.0455	-12	c.357 others(31): Show c.3576+1388_3576+1399delTGTGTGCGCGCG	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	22/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33707691	GCGCGCAC others(5): Show GCGCGCACACACA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0021 a0021	a0021c0038 a0021c0038	a0021c0038t0002 a0021c0038t0002	a0021c0038t0002g0007 a0021c0038t0002g0007	1	66	0.0152	-12	c.357 others(31): Show c.3576+1386_3576+1397delTGTGTGTGCGCG	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	22/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33768536	ATGTGTGT others(5): Show ATGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02886.hp1 HG03139.hp2 others(1): Show HG02647.hp1 HG02886.hp1 HG03139.hp2 HG03471.hp2	a0004 a0008 a0014 others(1): Show a0004 a0008 a0014 a0018	a0004c0031 a0008c0022 a0014c0036 others(1): Show a0004c0031 a0008c0022 a0014c0036 a0018c0029	a0004c0031t0004 a0008c0022t0001 a0014c0036t0002 others(1): Show a0004c0031t0004 a0008c0022t0001 a0014c0036t0002 a0018c0029t0007	a0004c0031t0004g0005 a0008c0022t0001g0060 a0014c0036t0002g0044 others(1): Show a0004c0031t0004g0005 a0008c0022t0001g0060 a0014c0036t0002g0044 a0018c0029t0007g0025	4	66	0.0606	-12	c.184 others(31): Show c.1846+4021_1846+4032delCACACACACACA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	13/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33783431	TTCTCTCT others(5): Show TTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00673.hp2 HG03017.hp2 others(1): Show HG00438.hp1 HG00673.hp2 HG03017.hp2 NA19030.hp1	a0001 a0003 a0013 others(1): Show a0001 a0003 a0013 a0024	a0001c0047 a0003c0003 a0013c0041 others(1): Show a0001c0047 a0003c0003 a0013c0041 a0024c0014	a0001c0047t0001 a0003c0003t0002 a0013c0041t0005 others(1): Show a0001c0047t0001 a0003c0003t0002 a0013c0041t0005 a0024c0014t0002	a0001c0047t0001g0031 a0003c0003t0002g0009 a0013c0041t0005g0011 others(1): Show a0001c0047t0001g0031 a0003c0003t0002g0009 a0013c0041t0005g0011 a0024c0014t0002g0059	4	66	0.0606	-12	c.166 others(31): Show c.1663+5157_1663+5168delGAGAGAGAGAGA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	12/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33790661	GTCTATCT others(5): Show GTCTATCTATCTA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00673.hp1 HG01069.hp1 others(11): Show HG00438.hp1 HG00673.hp1 HG01069.hp1 HG01074.hp2 HG02080.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02965.hp2 HG03017.hp1 HG03225.hp1 HG06807.hp1 NA19030.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0008 a0009 a0017 a0020 a0024	a0001c0040 a0001c0044 a0001c0045 others(11): Show a0001c0040 a0001c0044 a0001c0045 a0001c0047 a0002c0002 a0002c0006 a0003c0037 a0004c0051 a0008c0021 a0008c0022 a0009c0055 a0017c0052 a0020c0054 a0024c0014	a0001c0040t0001 a0001c0044t0002 a0001c0045t0013 others(11): Show a0001c0040t0001 a0001c0044t0002 a0001c0045t0013 a0001c0047t0001 a0002c0002t0005 a0002c0006t0001 a0003c0037t0007 a0004c0051t0001 a0008c0021t0004 a0008c0022t0001 a0009c0055t0001 a0017c0052t0003 a0020c0054t0008 a0024c0014t0002	a0001c0040t0001g0010 a0001c0044t0002g0026 a0001c0045t0013g0027 others(11): Show a0001c0040t0001g0010 a0001c0044t0002g0026 a0001c0045t0013g0027 a0001c0047t0001g0031 a0002c0002t0005g0036 a0002c0006t0001g0008 a0003c0037t0007g0038 a0004c0051t0001g0019 a0008c0021t0004g0023 a0008c0022t0001g0060 a0009c0055t0001g0049 a0017c0052t0003g0040 a0020c0054t0008g0030 a0024c0014t0002g0059	14	66	0.2121	-12	c.155 others(31): Show c.1550+1750_1550+1761delTAGATAGATAGA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	11/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33790801	ATATCTAT others(5): Show ATATCTATCTATC	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02055.hp2 HG03139.hp2 HG01243.hp1 HG02055.hp2 HG03139.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0004c0031 a0006c0016 a0001c0001 a0004c0031 a0006c0016	a0001c0001t0003 a0004c0031t0004 a0006c0016t0004 a0001c0001t0003 a0004c0031t0004 a0006c0016t0004	a0001c0001t0003g0063 a0004c0031t0004g0005 a0006c0016t0004g0034 a0001c0001t0003g0063 a0004c0031t0004g0005 a0006c0016t0004g0034	3	66	0.0455	-12	c.155 others(31): Show c.1550+1610_1550+1621delGATAGATAGATA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	11/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33862343	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03471.hp2 NA19030.hp1 HG01109.hp1 HG03471.hp2 NA19030.hp1	a0014 a0022 a0024 a0014 a0022 a0024	a0014c0036 a0022c0019 a0024c0014 a0014c0036 a0022c0019 a0024c0014	a0014c0036t0002 a0022c0019t0011 a0024c0014t0002 a0014c0036t0002 a0022c0019t0011 a0024c0014t0002	a0014c0036t0002g0044 a0022c0019t0011g0017 a0024c0014t0002g0059 a0014c0036t0002g0044 a0022c0019t0011g0017 a0024c0014t0002g0059	3	66	0.0455	-12	c.921 others(31): Show c.921-15359_921-15348delCACACACACACA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	5/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33950383	CAGAGAGA others(5): Show CAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0006 a0006	a0006c0016 a0006c0016	a0006c0016t0004 a0006c0016t0004	a0006c0016t0004g0034 a0006c0016t0004g0034	1	66	0.0152	-12	c.518 others(31): Show c.518-14441_518-14430delCTCTCTCTCTCT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	3/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33984860	AAGGCAGG others(5): Show AAGGCAGGCAGGC	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0004 a0004	a0004c0032 a0004c0032	a0004c0032t0001 a0004c0032t0001	a0004c0032t0001g0022 a0004c0032t0001g0022	1	66	0.0152	-12	c.517 others(31): Show c.517+47722_517+47733delGCCTGCCTGCCT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	3/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33989013	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp1 HG03017.hp2 others(2): Show HG01192.hp1 HG01243.hp1 HG03017.hp2 HG03139.hp2 HG03471.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0002c0005 a0003c0003 others(2): Show a0001c0001 a0002c0005 a0003c0003 a0004c0031 a0006c0013	a0001c0001t0003 a0002c0005t0003 a0003c0003t0002 others(2): Show a0001c0001t0003 a0002c0005t0003 a0003c0003t0002 a0004c0031t0004 a0006c0013t0003	a0001c0001t0003g0063 a0002c0005t0003g0056 a0003c0003t0002g0009 others(2): Show a0001c0001t0003g0063 a0002c0005t0003g0056 a0003c0003t0002g0009 a0004c0031t0004g0005 a0006c0013t0003g0058	5	66	0.0758	-12	c.517 others(31): Show c.517+43569_517+43580delATATATATATAT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	3/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	34052003	CTCTCTCT others(5): Show CTCTCTCTGACTG	C C	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0004 a0002c0006t0004	a0002c0006t0004g0052 a0002c0006t0004g0052	1	66	0.0152	-12	c.405 others(31): Show c.405-19309_405-19298delCAGTCAGAGAGA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	2/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	34076928	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0003 a0003	a0003c0048 a0003c0048	a0003c0048t0006 a0003c0048t0006	a0003c0048t0006g0032 a0003c0048t0006g0032	1	66	0.0152	-12	c.404 others(31): Show c.404+12037_404+12048delATATATATATAT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	2/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	34080921	GGAAAGAA others(5): Show GGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG00673.hp1 NA18998.hp1 HG00673.hp1 NA18998.hp1	a0009 a0010 a0009 a0010	a0009c0055 a0010c0056 a0009c0055 a0010c0056	a0009c0055t0001 a0010c0056t0001 a0009c0055t0001 a0010c0056t0001	a0009c0055t0001g0049 a0010c0056t0001g0047 a0009c0055t0001g0049 a0010c0056t0001g0047	2	66	0.0303	-12	c.404 others(29): Show c.404+8044_404+8055delTTTCTTTCTTTC	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	2/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	34087612	TATAATAA others(5): Show TATAATAATAATA	T T	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0009 a0009	a0009c0055 a0009c0055	a0009c0055t0001 a0009c0055t0001	a0009c0055t0001g0049 a0009c0055t0001g0049	1	66	0.0152	-12	c.404 others(29): Show c.404+1353_404+1364delTATTATTATTAT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	2/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	34111982	TTCTCTCT others(5): Show TTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00673.hp2 others(25): Show HG00438.hp1 HG00438.hp2 HG00673.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01192.hp2 HG01978.hp2 HG02080.hp1 HG02080.hp2 HG02809.hp1 HG02809.hp2 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 NA18998.hp1 NA18998.hp2 NA19043.hp2 NA20300.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0004 a0005 a0006 a0010 a0011 a0013 a0020 a0023 a0027 a0029 a0030	a0001c0001 a0001c0040 a0001c0042 others(21): Show a0001c0001 a0001c0040 a0001c0042 a0001c0044 a0001c0045 a0001c0047 a0002c0002 a0002c0006 a0003c0003 a0003c0004 a0003c0035 a0003c0048 a0004c0031 a0004c0049 a0005c0012 a0006c0013 a0010c0056 a0011c0039 a0013c0041 a0020c0054 a0023c0017 a0027c0018 a0029c0009 a0030c0008	a0001c0001t0001 a0001c0040t0001 a0001c0042t0005 others(24): Show a0001c0001t0001 a0001c0040t0001 a0001c0042t0005 a0001c0044t0002 a0001c0045t0013 a0001c0047t0001 a0002c0002t0001 a0002c0002t0010 a0002c0006t0001 a0002c0006t0004 a0003c0003t0002 a0003c0003t0005 a0003c0004t0003 a0003c0035t0006 a0003c0048t0006 a0004c0031t0004 a0004c0049t0009 a0005c0012t0001 a0006c0013t0003 a0010c0056t0001 a0011c0039t0014 a0013c0041t0005 a0020c0054t0008 a0023c0017t0016 a0027c0018t0001 a0029c0009t0018 a0030c0008t0004	a0001c0001t0001g0033 a0001c0040t0001g0010 a0001c0042t0005g0051 others(25): Show a0001c0001t0001g0033 a0001c0040t0001g0010 a0001c0042t0005g0051 a0001c0044t0002g0026 a0001c0045t0013g0027 a0001c0047t0001g0031 a0002c0002t0001g0013 a0002c0002t0010g0016 a0002c0006t0001g0008 a0002c0006t0004g0052 a0003c0003t0002g0009 a0003c0003t0005g0029 a0003c0004t0003g0053 a0003c0004t0003g0054 a0003c0035t0006g0006 a0003c0048t0006g0032 a0004c0031t0004g0005 a0004c0049t0009g0012 a0005c0012t0001g0003 a0006c0013t0003g0058 a0010c0056t0001g0047 a0011c0039t0014g0014 a0013c0041t0005g0011 a0020c0054t0008g0030 a0023c0017t0016g0066 a0027c0018t0001g0048 a0029c0009t0018g0065 a0030c0008t0004g0001	28	66	0.4242	-12	c.188 others(31): Show c.188-22801_188-22790delGAGAGAGAGAGA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	1/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	34135242	TCACACAC others(5): Show TCACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0018 a0018	a0018c0029 a0018c0029	a0018c0029t0007 a0018c0029t0007	a0018c0029t0007g0025 a0018c0029t0007g0025	1	66	0.0152	-12	c.187 others(31): Show c.187+29657_187+29668delTGTGTGTGTGTG	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	1/70		chr1	TogoVar
CSMD2_chr1_33508998_34170230	34169624	AGAGAGAG others(5): Show AGAGAGAGAGAGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0009 a0003c0003t0002g0009	1	66	0.0152	-12	c.-45 others(23): Show c.-4539_-4528delACTCTCTCTCTC	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding		4395	chr1	TogoVar
CSMD3_chr8_112217928_113441939	112240439	ATTGCCTC others(5): Show ATTGCCTCAATGG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00741.hp2 HG01074.hp2 others(7): Show HG00438.hp1 HG00741.hp2 HG01074.hp2 HG01081.hp2 HG01175.hp2 HG01257.hp1 HG02895.hp1 HG02922.hp1 HG02976.hp1 NA18944.hp1	a0001 a0002 a0015 others(1): Show a0001 a0002 a0015 a0016	a0001c0001 a0001c0024 a0002c0003 others(4): Show a0001c0001 a0001c0024 a0002c0003 a0002c0010 a0002c0033 a0015c0031 a0016c0034	a0001c0001t0002 a0001c0024t0002 a0002c0003t0002 others(4): Show a0001c0001t0002 a0001c0024t0002 a0002c0003t0002 a0002c0010t0002 a0002c0033t0002 a0015c0031t0002 a0016c0034t0002	a0001c0001t0002g0014 a0001c0001t0002g0022 a0001c0001t0002g0025 others(7): Show a0001c0001t0002g0014 a0001c0001t0002g0022 a0001c0001t0002g0025 a0001c0001t0002g0068 a0001c0024t0002g0024 a0002c0003t0002g0006 a0002c0010t0002g0070 a0002c0033t0002g0029 a0015c0031t0002g0049 a0016c0034t0002g0011	10	80	0.1250	-12	c.104 others(33): Show c.10468+1269_10468+1280delCCATTGAGGCAA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	66/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112252679	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0025 a0001c0001t0002g0025	1	80	0.0125	-12	c.101 others(33): Show c.10110+1562_10110+1573delTATATATATATA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	63/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112270343	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0008 a0002c0003t0008	a0002c0003t0008g0077 a0002c0003t0008g0077	1	80	0.0125	-12	c.950 others(31): Show c.9509-4765_9509-4754delACACACACACAC	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	59/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112279010	AAAAAACA others(5): Show AAAAAACAACAAC	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01175.hp1 HG01255.hp2 others(7): Show HG00423.hp1 HG01175.hp1 HG01255.hp2 HG01257.hp2 HG02735.hp2 HG02809.hp1 HG03490.hp1 HG03688.hp2 NA18990.hp1 NA19063.hp1	a0001 a0002 a0012 others(1): Show a0001 a0002 a0012 a0014	a0001c0007 a0001c0016 a0002c0005 others(3): Show a0001c0007 a0001c0016 a0002c0005 a0002c0011 a0012c0022 a0014c0030	a0001c0007t0001 a0001c0016t0001 a0002c0005t0001 others(3): Show a0001c0007t0001 a0001c0016t0001 a0002c0005t0001 a0002c0011t0001 a0012c0022t0001 a0014c0030t0001	a0001c0007t0001g0012 a0001c0007t0001g0043 a0001c0016t0001g0073 others(7): Show a0001c0007t0001g0012 a0001c0007t0001g0043 a0001c0016t0001g0073 a0002c0005t0001g0027 a0002c0005t0001g0033 a0002c0005t0001g0035 a0002c0005t0001g0036 a0002c0011t0001g0001 a0012c0022t0001g0013 a0014c0030t0001g0030	10	80	0.1250	-12	c.950 others(31): Show c.9508+2152_9508+2163delGTTGTTGTTTTT	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	59/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112279013	AAACAACA others(5): Show AAACAACAACAAC	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02258.hp2 HG02280.hp1 others(1): Show HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02970.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0019 a0002c0028 a0006c0008 a0001c0019 a0002c0028 a0006c0008	a0001c0019t0005 a0002c0028t0005 a0006c0008t0005 a0001c0019t0005 a0002c0028t0005 a0006c0008t0005	a0001c0019t0005g0065 a0002c0028t0005g0078 a0006c0008t0005g0004 others(1): Show a0001c0019t0005g0065 a0002c0028t0005g0078 a0006c0008t0005g0004 a0006c0008t0005g0005	4	80	0.0500	-12	c.950 others(31): Show c.9508+2149_9508+2160delGTTGTTGTTGTT	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	59/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112361572	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02976.hp2 NA18990.hp1 HG01255.hp2 HG02976.hp2 NA18990.hp1	a0001 a0002 a0014 a0001 a0002 a0014	a0001c0016 a0002c0003 a0014c0030 a0001c0016 a0002c0003 a0014c0030	a0001c0016t0001 a0002c0003t0006 a0014c0030t0001 a0001c0016t0001 a0002c0003t0006 a0014c0030t0001	a0001c0016t0001g0073 a0002c0003t0006g0009 a0014c0030t0001g0030 a0001c0016t0001g0073 a0002c0003t0006g0009 a0014c0030t0001g0030	3	80	0.0375	-12	c.613 others(31): Show c.6137-9050_6137-9039delATATATATATAT	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	38/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112370023	GGAAGAAG others(5): Show GGAAGAAGAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG00673.hp2 others(9): Show HG00423.hp2 HG00438.hp2 HG00673.hp2 HG00741.hp1 HG01109.hp2 HG01261.hp1 HG03471.hp1 HG03490.hp2 HG03688.hp1 NA18990.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0015 a0003c0002 others(1): Show a0001c0001 a0001c0015 a0003c0002 a0004c0004	a0001c0001t0001 a0001c0015t0001 a0003c0002t0001 others(2): Show a0001c0001t0001 a0001c0015t0001 a0003c0002t0001 a0004c0004t0001 a0004c0004t0009	a0001c0001t0001g0046 a0001c0015t0001g0026 a0003c0002t0001g0008 others(9): Show a0001c0001t0001g0046 a0001c0015t0001g0026 a0003c0002t0001g0008 a0003c0002t0001g0050 a0003c0002t0001g0053 a0003c0002t0001g0066 a0003c0002t0001g0072 a0003c0002t0001g0075 a0004c0004t0001g0028 a0004c0004t0001g0034 a0004c0004t0001g0076 a0004c0004t0009g0032	12	80	0.1500	-12	c.613 others(33): Show c.6136+10317_6136+10328delTTCTTCTTCTTC	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	38/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112455591	GTAAATAA others(5): Show GTAAATAAATAAA	G G	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01261.hp2 HG02055.hp2 others(6): Show HG01169.hp2 HG01261.hp2 HG02055.hp2 HG02717.hp1 HG02809.hp1 HG03041.hp2 HG03225.hp1 HG03516.hp1 NA20300.hp2	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0008 a0013	a0001c0001 a0001c0007 a0001c0023 others(6): Show a0001c0001 a0001c0007 a0001c0023 a0002c0003 a0002c0032 a0005c0012 a0005c0013 a0008c0014 a0013c0026	a0001c0001t0007 a0001c0007t0001 a0001c0023t0001 others(6): Show a0001c0001t0007 a0001c0007t0001 a0001c0023t0001 a0002c0003t0008 a0002c0032t0001 a0005c0012t0001 a0005c0013t0001 a0008c0014t0005 a0013c0026t0001	a0001c0001t0007g0041 a0001c0007t0001g0043 a0001c0023t0001g0056 others(6): Show a0001c0001t0007g0041 a0001c0007t0001g0043 a0001c0023t0001g0056 a0002c0003t0008g0077 a0002c0032t0001g0079 a0005c0012t0001g0038 a0005c0013t0001g0039 a0008c0014t0005g0040 a0013c0026t0001g0057	9	80	0.1125	-12	c.539 others(33): Show c.5395+16988_5395+16999delTTTATTTATTTA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	32/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112494494	CCTTTCTT others(5): Show CCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG01175.hp1 others(6): Show HG00423.hp2 HG00438.hp2 HG01175.hp1 HG02258.hp2 HG02559.hp2 HG02970.hp2 HG03688.hp2 NA19030.hp1 NA19063.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0007 a0010	a0001c0001 a0001c0007 a0001c0019 others(4): Show a0001c0001 a0001c0007 a0001c0019 a0002c0005 a0003c0002 a0007c0009 a0010c0025	a0001c0001t0004 a0001c0007t0001 a0001c0019t0005 others(4): Show a0001c0001t0004 a0001c0007t0001 a0001c0019t0005 a0002c0005t0001 a0003c0002t0001 a0007c0009t0001 a0010c0025t0003	a0001c0001t0004g0015 a0001c0007t0001g0012 a0001c0019t0005g0065 others(6): Show a0001c0001t0004g0015 a0001c0007t0001g0012 a0001c0019t0005g0065 a0002c0005t0001g0027 a0002c0005t0001g0033 a0003c0002t0001g0050 a0003c0002t0001g0053 a0007c0009t0001g0048 a0010c0025t0003g0052	9	80	0.1125	-12	c.508 others(31): Show c.5084-1823_5084-1812delAAAGAAAGAAAG	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	30/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112630942	TCACACAC others(5): Show TCACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00673.hp2 HG01081.hp1 others(17): Show HG00438.hp2 HG00673.hp2 HG01081.hp1 HG01109.hp2 HG02055.hp1 HG02258.hp1 HG02280.hp2 HG02559.hp2 HG02717.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0007 a0013 a0017	a0001c0001 a0002c0003 a0002c0005 others(6): Show a0001c0001 a0002c0003 a0002c0005 a0002c0010 a0003c0002 a0004c0004 a0007c0009 a0013c0026 a0017c0029	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0002c0003t0003 a0002c0003t0006 a0002c0005t0001 a0002c0010t0006 a0003c0002t0001 a0004c0004t0001 a0004c0004t0009 a0007c0009t0001 a0013c0026t0001 a0017c0029t0004	a0001c0001t0001g0016 a0001c0001t0003g0010 a0001c0001t0004g0007 others(17): Show a0001c0001t0001g0016 a0001c0001t0003g0010 a0001c0001t0004g0007 a0001c0001t0004g0015 a0001c0001t0004g0018 a0001c0001t0004g0042 a0001c0001t0004g0067 a0002c0003t0003g0062 a0002c0003t0006g0009 a0002c0003t0006g0061 a0002c0005t0001g0036 a0002c0010t0006g0064 a0003c0002t0001g0053 a0004c0004t0001g0031 a0004c0004t0001g0076 a0004c0004t0009g0032 a0007c0009t0001g0048 a0007c0009t0001g0069 a0013c0026t0001g0057 a0017c0029t0004g0063	20	80	0.2500	-12	c.371 others(31): Show c.3715+5863_3715+5874delTGTGTGTGTGTG	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	22/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112636538	TTCTATCT others(5): Show TTCTATCTATCTA	T T	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0044 a0001c0001t0003g0044	1	80	0.0125	-12	c.371 others(29): Show c.3715+267_3715+278delTAGATAGATAGA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	22/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112692911	TTATATCT others(5): Show TTATATCTATCTA	T T	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0006 a0002c0003t0002g0006	1	80	0.0125	-12	c.197 others(31): Show c.1973-2873_1973-2862delTAGATAGATATA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	13/70		chr8	TogoVar
CSMD3_chr8_112217928_113441939	112692913	ATATCTAT others(5): Show ATATCTATCTATC	A A	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01074.hp1 HG02055.hp1 others(6): Show HG00673.hp1 HG01074.hp1 HG02055.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02895.hp1 NA19063.hp2 NA19240.hp1	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0017	a0001c0001 a0001c0006 a0001c0019 others(3): Show a0001c0001 a0001c0006 a0001c0019 a0002c0003 a0006c0008 a0017c0029	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0006t0003 a0001c0019t0005 a0002c0003t0006 a0006c0008t0005 a0017c0029t0004	a0001c0001t0002g0025 a0001c0001t0003g0023 a0001c0001t0004g0007 others(6): Show a0001c0001t0002g0025 a0001c0001t0003g0023 a0001c0001t0004g0007 a0001c0006t0003g0055 a0001c0006t0003g0074 a0001c0019t0005g0065 a0002c0003t0006g0061 a0006c0008t0005g0005 a0017c0029t0004g0063	9	80	0.1125	-12	c.197 others(31): Show c.1973-2875_1973-2864delGATAGATAGATA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	13/70		chr8	TogoVar

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