Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AGBL4_chr1_48527854_50028954	49716588	TTGGCTTC others(5): Show TTGGCTTCATCCC	T T	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02970.hp1 HG03471.hp1 others(3): Show HG02922.hp2 HG02970.hp1 HG03471.hp1 HG03540.hp2 NA18522.hp2 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0002c0003t0005	a0001c0001t0001g0087 a0001c0001t0002g0018 a0001c0001t0002g0084 others(3): Show a0001c0001t0001g0087 a0001c0001t0002g0018 a0001c0001t0002g0084 a0001c0001t0002g0086 a0001c0001t0007g0085 a0002c0003t0005g0017	6	104	0.0577	-12	c.158 others(31): Show c.158-19163_158-19152delGGGATGAAGCCA	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	2/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49875494	TTTTATGG others(5): Show TTTTATGGCTGCA	T T	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0040	1	104	0.0096	-12	c.35- others(29): Show c.35-23988_35-23977delTGCAGCCATAAA	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49896608	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01167.hp2 HG01243.hp2 others(16): Show HG00609.hp1 HG01167.hp2 HG01243.hp2 HG01496.hp2 HG02004.hp1 HG02155.hp2 HG02451.hp2 HG02717.hp2 HG02896.hp2 HG02970.hp2 HG03130.hp1 HG04204.hp1 HG04204.hp2 NA18970.hp1 NA18983.hp2 NA19002.hp1 NA19068.hp2 NA19082.hp2 NA20129.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0005 a0001c0001 a0001c0004 a0003c0005	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(7): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0004t0003 a0001c0004t0010 a0003c0005t0008	a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0040 others(16): Show a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0080 a0001c0001t0004g0041 a0001c0001t0004g0081 a0001c0001t0006g0045 a0001c0001t0009g0039 a0001c0001t0012g0054 a0001c0001t0013g0006 a0001c0001t0016g0001 a0001c0004t0003g0051 a0001c0004t0003g0052 a0001c0004t0010g0048 a0003c0005t0008g0046	19	104	0.1827	-12	c.35- others(29): Show c.35-45102_35-45091delGTGTGTGTGTGT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49933326	AAAATGAA others(5): Show AAAATGAAGAGAT	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0082 a0001c0001t0002g0082	1	104	0.0096	-12	c.35- others(29): Show c.35-81820_35-81809delATCTCTTCATTT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49948053	TATATATA others(5): Show TATATATATGTAA	T T	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0004 a0004c0006t0004	a0004c0006t0004g0071 a0004c0006t0004g0071	1	104	0.0096	-12	c.34+ others(29): Show c.34+75698_34+75709delTTACATATATAT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	50002359	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01071.hp1 HG01243.hp1 others(21): Show HG00609.hp2 HG01071.hp1 HG01243.hp1 HG02071.hp1 HG02132.hp1 HG02155.hp1 HG02698.hp1 HG02809.hp2 HG02976.hp2 HG03041.hp1 HG03492.hp2 HG03540.hp1 HG03710.hp1 HG03831.hp2 NA18946.hp2 NA18962.hp2 NA18970.hp2 NA18971.hp1 NA18977.hp2 NA18983.hp1 NA19002.hp2 NA19043.hp1 NA19068.hp1 NA19240.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003 a0005c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0014 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0009 a0001c0004t0003 a0002c0003t0001 a0005c0010t0008	a0001c0001t0001g0030 a0001c0001t0002g0029 a0001c0001t0004g0072 others(21): Show a0001c0001t0001g0030 a0001c0001t0002g0029 a0001c0001t0004g0072 a0001c0001t0005g0028 a0001c0001t0006g0024 a0001c0001t0006g0025 a0001c0001t0006g0069 a0001c0001t0010g0027 a0001c0001t0014g0031 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0038 a0001c0002t0002g0002 a0001c0002t0002g0003 a0001c0002t0002g0005 a0001c0002t0003g0073 a0001c0002t0003g0074 a0001c0002t0006g0037 a0001c0002t0009g0004 a0001c0002t0009g0034 a0001c0004t0003g0026 a0002c0003t0001g0070 a0005c0010t0008g0023	24	104	0.2308	-12	c.34+ others(29): Show c.34+21392_34+21403delAAAAAAAAAAAA	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	50022614	CCACACAC others(5): Show CCACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01167.hp2 HG02071.hp2 others(4): Show HG00609.hp1 HG01167.hp2 HG02071.hp2 HG03831.hp2 NA18977.hp2 NA18983.hp1 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0002t0002 a0001c0002t0009	a0001c0001t0001g0008 a0001c0001t0002g0007 a0001c0001t0013g0006 others(4): Show a0001c0001t0001g0008 a0001c0001t0002g0007 a0001c0001t0013g0006 a0001c0002t0002g0002 a0001c0002t0002g0003 a0001c0002t0002g0005 a0001c0002t0009g0004	7	104	0.0673	-12	c.34+ others(27): Show c.34+1137_34+1148delTGTGTGTGTGTG	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGFG1_chr2_227467156_227566217	227564263	GGTGGGAG others(5): Show GGTGGGAGGGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG03654.hp2 others(1): Show HG02896.hp1 HG02897.hp2 HG03654.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0010 a0001c0001t0008 a0001c0001t0010	a0001c0001t0008g0030 a0001c0001t0010g0026 a0001c0001t0010g0027 others(1): Show a0001c0001t0008g0030 a0001c0001t0010g0026 a0001c0001t0010g0027 a0001c0001t0010g0029	4	328	0.0122	-12	c.97 others(23): Show c.9769_*9780delGTGGGAGGGTGT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding		3047		chr2	TogoVar
AGFG1_chr2_227467156_227566217	227564267	GGAGGGTG others(5): Show GGAGGGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02451.hp1 HG02486.hp1 others(7): Show HG02109.hp2 HG02451.hp1 HG02486.hp1 HG02723.hp2 HG02970.hp1 HG03130.hp1 HG03225.hp1 HG03579.hp1 NA18906.hp2 NA18999.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0030 a0001c0001t0031 others(2): Show a0001c0001t0001 a0001c0001t0030 a0001c0001t0031 a0001c0001t0041 a0001c0004t0006	a0001c0001t0001g0121 a0001c0001t0001g0181 a0001c0001t0001g0188 others(7): Show a0001c0001t0001g0121 a0001c0001t0001g0181 a0001c0001t0001g0188 a0001c0001t0030g0243 a0001c0001t0031g0193 a0001c0001t0041g0081 a0001c0004t0006g0001 a0001c0004t0006g0033 a0001c0004t0006g0034 a0001c0004t0006g0035	10	328	0.0305	-12	c.97 others(23): Show c.9773_*9784delGAGGGTGTGTGT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding		3051		chr2	TogoVar
AGFG2_chr7_100534203_100573220	100549675	GTTTATTT others(5): Show GTTTATTTATTTA	G G	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0015 a0002c0002t0015	a0002c0002t0015g0201 a0002c0002t0015g0201	1	246	0.0041	-12	c.316 others(27): Show c.316-703_316-692delTTATTTATTTAT	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGFG2_chr7_100534203_100573220	100555263	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0212 a0001c0001t0001g0212	1	246	0.0041	-12	c.752 others(27): Show c.752-330_752-319delTTTTTTTTTTTT	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGFG2_chr7_100534203_100573220	100570843	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 NA18975.hp1 HG01167.hp2 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0189 a0001c0001t0001g0026 a0001c0001t0001g0189	2	246	0.0081	-12	c.58 others(23): Show c.5853_*5864delAAAAAAAAAAAA	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding		2624		chr7	TogoVar
AGK_chr7_141546410_141660244	141546792	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0256 a0001c0001t0004g0256	1	274	0.0037	-12	c.-46 others(23): Show c.-4656_-4645delTTTTTTTTTTTT	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding		4617		chr7	TogoVar
AGK_chr7_141546410_141660244	141597890	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00408.hp2 HG00423.hp2 others(70): Show HG00140.hp2 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG00642.hp2 HG00735.hp1 HG01070.hp2 HG01081.hp1 HG01123.hp2 HG01168.hp1 HG01192.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01943.hp1 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02683.hp2 HG02698.hp2 HG03491.hp1 HG03710.hp2 HG03831.hp1 HG04204.hp1 NA18747.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp2 NA18954.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp2 NA18960.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp2 NA18975.hp1 NA18977.hp2 NA18979.hp1 NA18983.hp1 NA18986.hp2 NA18992.hp1 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp2 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19074.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 others(70): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0222 a0001c0001t0007g0015 a0001c0001t0007g0053 a0001c0001t0012g0041 a0001c0001t0014g0006 a0001c0001t0015g0054	73	274	0.2664	-12	c.221 others(29): Show c.221+1267_221+1278delAAAAAAAAAAAA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141604374	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	274	0.0037	-12	c.297 others(29): Show c.297+3113_297+3124delTATATATATATA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141620566	CTGGAAAC others(5): Show CTGGAAACCACTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00408.hp2 HG00423.hp2 others(81): Show HG00140.hp2 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG00642.hp2 HG00673.hp1 HG00735.hp1 HG01070.hp2 HG01081.hp1 HG01099.hp1 HG01123.hp2 HG01168.hp1 HG01192.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01943.hp1 HG01993.hp2 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp2 HG03130.hp2 HG03491.hp1 HG03710.hp2 HG03831.hp1 HG04204.hp1 NA18747.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp2 NA18954.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp2 NA18960.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp2 NA18975.hp1 NA18977.hp2 NA18979.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp2 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp2 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19074.hp1 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 others(81): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0179 a0001c0001t0001g0222 a0001c0001t0007g0015 a0001c0001t0007g0053 a0001c0001t0012g0041 a0001c0001t0014g0006 a0001c0001t0015g0054	84	274	0.3066	-12	c.519 others(29): Show c.519-1144_519-1133delCTTTGGAAACCA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141620729	TCCAGGAG others(5): Show TCCAGGAGCTCAA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01168.hp2 HG01952.hp2 others(22): Show HG00408.hp1 HG01168.hp2 HG01952.hp2 HG02015.hp1 HG02155.hp1 HG02486.hp1 HG02602.hp2 HG02647.hp2 HG02738.hp1 HG02818.hp2 HG03130.hp1 HG03453.hp1 HG03579.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 NA18949.hp1 NA18959.hp1 NA18992.hp2 NA18997.hp1 NA19064.hp1 NA19078.hp1 NA19089.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0002 a0001c0001t0017 a0004c0004t0002 a0001c0001t0002 a0001c0001t0017 a0004c0004t0002	a0001c0001t0002g0219 a0001c0001t0002g0229 a0001c0001t0002g0230 others(22): Show a0001c0001t0002g0219 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0263 a0001c0001t0017g0244 a0004c0004t0002g0245	25	274	0.0912	-12	c.519 others(27): Show c.519-991_519-980delACCAGGAGCTCA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGL_chr1_99845361_99929020	99856314	CCCTCCCT others(5): Show CCCTCCCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0244 a0001c0001t0001g0244	1	318	0.0031	-12	c.83- others(27): Show c.83-5181_83-5170delTCCTTCCTCCCT	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	2/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99899518	CTCTCTCT others(5): Show CTCTCTCTCTCTT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0270 a0001c0001t0001g0270	1	318	0.0031	-12	c.336 others(31): Show c.3363-1094_3363-1083delTTCTCTCTCTCT	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	25/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGMAT_chr1_15566699_15590051	15575729	TTTTATTT others(5): Show TTTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01069.hp1 HG01071.hp1 others(17): Show HG00280.hp1 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01167.hp1 HG01243.hp1 HG01516.hp2 HG01517.hp2 HG02055.hp1 HG02109.hp1 HG02280.hp1 HG02451.hp2 HG02630.hp1 HG02723.hp2 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03209.hp2 HG03540.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0010 a0001c0013 others(3): Show a0001c0002 a0001c0010 a0001c0013 a0002c0001 a0003c0003 a0003c0005	a0001c0002t0047 a0001c0010t0088 a0001c0013t0078 others(10): Show a0001c0002t0047 a0001c0010t0088 a0001c0013t0078 a0002c0001t0001 a0003c0003t0031 a0003c0005t0015 a0003c0005t0020 a0003c0005t0025 a0003c0005t0038 a0003c0005t0042 a0003c0005t0048 a0003c0005t0049 a0003c0005t0050	a0001c0002t0047g0197 a0001c0010t0088g0207 a0001c0013t0078g0208 others(14): Show a0001c0002t0047g0197 a0001c0010t0088g0207 a0001c0013t0078g0208 a0002c0001t0001g0251 a0003c0003t0031g0069 a0003c0005t0015g0103 a0003c0005t0015g0108 a0003c0005t0015g0111 a0003c0005t0015g0115 a0003c0005t0020g0015 a0003c0005t0025g0106 a0003c0005t0025g0110 a0003c0005t0038g0032 a0003c0005t0042g0113 a0003c0005t0048g0114 a0003c0005t0049g0112 a0003c0005t0050g0107	20	390	0.0513	-12	c.901 others(27): Show c.901-900_901-889delTAAATAAATAAA	AGMAT	ENSG00000116771.6	transcript	ENST00000375826.4	protein_coding	5/6			chr1	TogoVar
AGMAT_chr1_15566699_15590051	15586050	AAAATAAA others(5): Show AAAATAAATAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 NA19074.hp2 NA19084.hp2 HG02040.hp1 NA19074.hp2 NA19084.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0004 a0001c0002t0002 a0001c0002t0004	a0001c0002t0002g0184 a0001c0002t0004g0183 a0001c0002t0004g0186 a0001c0002t0002g0184 a0001c0002t0004g0183 a0001c0002t0004g0186	3	390	0.0077	-12	c.-10 others(23): Show c.-1095_-1084delATTTATTTATTT	AGMAT	ENSG00000116771.6	transcript	ENST00000375826.4	protein_coding		1000		chr1	TogoVar
AGMO_chr7_15195317_15567015	15198196	CGAGAGAG others(5): Show CGAGAGAGAGAGA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG03041.hp2 NA19240.hp1 HG00639.hp1 HG03041.hp2 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0003c0006t0001 a0001c0001t0001 a0003c0006t0001	a0001c0001t0001g0186 a0003c0006t0001g0181 a0003c0006t0001g0187 a0001c0001t0001g0186 a0003c0006t0001g0181 a0003c0006t0001g0187	3	236	0.0127	-12	c.30 others(23): Show c.3077_*3088delTCTCTCTCTCTC	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding		2120		chr7	TogoVar
AGMO_chr7_15195317_15567015	15198245	GAGAGAGA others(5): Show GAGAGAGAGAGAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02040.hp2 HG02273.hp2 HG02040.hp2 HG02273.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0143 a0001c0001t0002g0105 a0001c0001t0001g0143 a0001c0001t0002g0105	2	236	0.0085	-12	c.30 others(23): Show c.3028_*3039delGTCTCTCTCTCT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding		2071		chr7	TogoVar
AGMO_chr7_15195317_15567015	15202458	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00639.hp2 HG01074.hp2 others(42): Show HG00323.hp1 HG00639.hp2 HG01074.hp2 HG01106.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp2 HG01261.hp2 HG01433.hp1 HG01975.hp1 HG01975.hp2 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp2 HG02572.hp2 HG02622.hp1 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02922.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp1 HG03453.hp2 HG03471.hp2 HG03491.hp2 HG03654.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp2 HG04228.hp2 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18945.hp2 NA19066.hp1 NA19078.hp2 NA19088.hp2	a0001 a0002 a0014 a0001 a0002 a0014	a0001c0001 a0001c0003 a0001c0007 others(5): Show a0001c0001 a0001c0003 a0001c0007 a0001c0011 a0001c0018 a0002c0004 a0002c0019 a0014c0014	a0001c0001t0001 a0001c0001t0006 a0001c0003t0001 others(6): Show a0001c0001t0001 a0001c0001t0006 a0001c0003t0001 a0001c0007t0001 a0001c0011t0001 a0001c0018t0001 a0002c0004t0001 a0002c0019t0001 a0014c0014t0001	a0001c0001t0001g0019 a0001c0001t0001g0030 a0001c0001t0001g0036 others(42): Show a0001c0001t0001g0019 a0001c0001t0001g0030 a0001c0001t0001g0036 a0001c0001t0001g0048 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0111 a0001c0001t0001g0120 a0001c0001t0001g0124 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0155 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0179 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0203 a0001c0001t0006g0231 a0001c0001t0006g0233 a0001c0001t0006g0234 a0001c0003t0001g0034 a0001c0003t0001g0041 a0001c0003t0001g0068 a0001c0007t0001g0015 a0001c0007t0001g0016 a0001c0011t0001g0210 a0001c0018t0001g0191 a0002c0004t0001g0010 a0002c0019t0001g0066 a0014c0014t0001g0180	45	236	0.1907	-12	c.126 others(31): Show c.1264-1111_1264-1100delTTTTTTTTTTTT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15212247	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02647.hp1 HG02896.hp2 others(2): Show HG02451.hp1 HG02647.hp1 HG02896.hp2 HG02976.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0005t0003 a0001c0001t0001 a0001c0001t0003 a0001c0005t0003	a0001c0001t0001g0082 a0001c0001t0003g0043 a0001c0001t0003g0204 others(2): Show a0001c0001t0001g0082 a0001c0001t0003g0043 a0001c0001t0003g0204 a0001c0001t0003g0215 a0001c0005t0003g0001	5	236	0.0212	-12	c.126 others(33): Show c.1264-10900_1264-10889delGTGTGTGTGTGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15248179	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02109.hp2 HG02647.hp1 others(6): Show HG01261.hp2 HG02109.hp2 HG02647.hp1 HG02886.hp2 HG02896.hp2 HG02976.hp1 HG03471.hp2 HG03540.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0003t0001 a0001c0005t0003	a0001c0001t0001g0102 a0001c0001t0001g0160 a0001c0001t0003g0043 others(6): Show a0001c0001t0001g0102 a0001c0001t0001g0160 a0001c0001t0003g0043 a0001c0001t0003g0182 a0001c0001t0003g0204 a0001c0001t0003g0215 a0001c0001t0004g0184 a0001c0003t0001g0068 a0001c0005t0003g0001	9	236	0.0381	-12	c.126 others(33): Show c.1264-46832_1264-46821delATATATATATAT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15270596	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG06807.hp1 HG00639.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0186 a0001c0007t0001g0017 a0001c0001t0001g0186 a0001c0007t0001g0017	2	236	0.0085	-12	c.126 others(33): Show c.1264-69249_1264-69238delAAAAAAAAAAAA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15277311	TAATAAAT others(5): Show TAATAAATAAATA	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01109.hp1 HG01167.hp1 others(24): Show HG00639.hp2 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01243.hp2 HG02109.hp1 HG02257.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02622.hp1 HG02630.hp1 HG02723.hp1 HG02818.hp2 HG02922.hp1 HG02965.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0005 others(5): Show a0001c0001 a0001c0003 a0001c0005 a0001c0007 a0001c0011 a0001c0018 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0003t0001 a0001c0005t0001 a0001c0007t0001 a0001c0007t0003 a0001c0011t0001 a0001c0018t0001 a0002c0002t0001 a0002c0002t0004 a0002c0002t0007 a0002c0004t0001 a0002c0004t0004 a0002c0004t0007	a0001c0001t0001g0019 a0001c0001t0001g0064 a0001c0001t0001g0082 others(24): Show a0001c0001t0001g0019 a0001c0001t0001g0064 a0001c0001t0001g0082 a0001c0001t0001g0173 a0001c0001t0001g0179 a0001c0001t0001g0185 a0001c0001t0003g0204 a0001c0001t0004g0031 a0001c0003t0001g0034 a0001c0003t0001g0041 a0001c0005t0001g0006 a0001c0005t0001g0007 a0001c0007t0001g0015 a0001c0007t0001g0016 a0001c0007t0003g0014 a0001c0011t0001g0210 a0001c0018t0001g0191 a0002c0002t0001g0212 a0002c0002t0001g0213 a0002c0002t0001g0214 a0002c0002t0004g0208 a0002c0002t0004g0209 a0002c0002t0007g0217 a0002c0004t0001g0010 a0002c0004t0004g0011 a0002c0004t0007g0003 a0002c0004t0007g0008	27	236	0.1144	-12	c.126 others(33): Show c.1264-75964_1264-75953delTATTTATTTATT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15277343	AAATAAAT others(5): Show AAATAAATAAATT	A A	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0233 a0001c0001t0006g0233	1	236	0.0042	-12	c.126 others(33): Show c.1264-75996_1264-75985delAATTTATTTATT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15299830	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0072 a0001c0001t0001g0072	1	236	0.0042	-12	c.126 others(33): Show c.1263+65672_1263+65683delGTGTGTGTGTGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15304640	AGTCCCTG others(5): Show AGTCCCTGATTCG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01884.hp2 HG02630.hp1 others(4): Show HG01109.hp1 HG01884.hp2 HG02630.hp1 HG02818.hp2 HG02886.hp1 HG03540.hp1 NA18906.hp1	a0002 a0007 a0008 a0002 a0007 a0008	a0002c0002 a0007c0024 a0008c0023 a0002c0002 a0007c0024 a0008c0023	a0002c0002t0001 a0002c0002t0004 a0007c0024t0004 others(1): Show a0002c0002t0001 a0002c0002t0004 a0007c0024t0004 a0008c0023t0007	a0002c0002t0001g0212 a0002c0002t0001g0213 a0002c0002t0001g0214 others(4): Show a0002c0002t0001g0212 a0002c0002t0001g0213 a0002c0002t0001g0214 a0002c0002t0004g0208 a0002c0002t0004g0209 a0007c0024t0004g0224 a0008c0023t0007g0227	7	236	0.0297	-12	c.126 others(33): Show c.1263+60862_1263+60873delCGAATCAGGGAC	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15354316	GTGTATAT others(5): Show GTGTATATACGTA	G G	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	236	0.0042	-12	c.126 others(33): Show c.1263+11186_1263+11197delTACGTATATACA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15354378	ATACACGT others(5): Show ATACACGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0164	1	236	0.0042	-12	c.126 others(33): Show c.1263+11124_1263+11135delCACACACGTGTA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15354381	CACGTGTG others(5): Show CACGTGTGTGTAT	C C	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0015 a0015	a0015c0020 a0015c0020	a0015c0020t0002 a0015c0020t0002	a0015c0020t0002g0202 a0015c0020t0002g0202	1	236	0.0042	-12	c.126 others(33): Show c.1263+11121_1263+11132delATACACACACGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15354484	ATATACAC others(5): Show ATATACACACGTG	A A	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0159	1	236	0.0042	-12	c.126 others(33): Show c.1263+11018_1263+11029delCACGTGTGTATA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15354496	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01081.hp2 HG01515.hp2 others(5): Show HG01074.hp1 HG01081.hp2 HG01515.hp2 HG02155.hp2 HG02615.hp2 HG02976.hp2 NA18943.hp2 NA18951.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0010 a0001c0001 a0005c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0005c0010t0001 a0005c0010t0003	a0001c0001t0001g0101 a0001c0001t0001g0135 a0001c0001t0001g0221 others(5): Show a0001c0001t0001g0101 a0001c0001t0001g0135 a0001c0001t0001g0221 a0001c0001t0002g0023 a0001c0001t0002g0088 a0001c0001t0006g0236 a0005c0010t0001g0194 a0005c0010t0003g0193	8	236	0.0339	-12	c.126 others(33): Show c.1263+11006_1263+11017delTATATATATATA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15387949	CCAGGCTG others(5): Show CCAGGCTGGAGTG	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02055.hp1 HG02055.hp2 others(29): Show HG01109.hp1 HG02055.hp1 HG02055.hp2 HG02145.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02717.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03516.hp1 HG03540.hp1 NA18522.hp2 NA18906.hp1 NA19043.hp2 NA19240.hp1 NA20300.hp1	a0002 a0003 a0004 others(2): Show a0002 a0003 a0004 a0008 a0014	a0002c0002 a0002c0004 a0002c0019 others(5): Show a0002c0002 a0002c0004 a0002c0019 a0003c0006 a0003c0009 a0004c0008 a0008c0023 a0014c0014	a0002c0002t0001 a0002c0002t0002 a0002c0002t0004 others(15): Show a0002c0002t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0007 a0002c0004t0001 a0002c0004t0003 a0002c0004t0004 a0002c0004t0007 a0002c0019t0001 a0003c0006t0001 a0003c0006t0002 a0003c0006t0004 a0003c0009t0001 a0003c0009t0007 a0004c0008t0001 a0004c0008t0011 a0008c0023t0007 a0014c0014t0001	a0002c0002t0001g0021 a0002c0002t0001g0022 a0002c0002t0001g0060 others(29): Show a0002c0002t0001g0021 a0002c0002t0001g0022 a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0212 a0002c0002t0001g0213 a0002c0002t0001g0214 a0002c0002t0002g0112 a0002c0002t0002g0172 a0002c0002t0004g0024 a0002c0002t0004g0208 a0002c0002t0004g0209 a0002c0002t0007g0217 a0002c0004t0001g0010 a0002c0004t0003g0012 a0002c0004t0004g0009 a0002c0004t0004g0011 a0002c0004t0007g0003 a0002c0004t0007g0008 a0002c0019t0001g0066 a0003c0006t0001g0181 a0003c0006t0001g0187 a0003c0006t0001g0207 a0003c0006t0002g0033 a0003c0006t0004g0076 a0003c0009t0001g0004 a0003c0009t0007g0005 a0004c0008t0001g0225 a0004c0008t0001g0228 a0004c0008t0011g0226 a0008c0023t0007g0227 a0014c0014t0001g0180	32	236	0.1356	-12	c.823 others(27): Show c.823-421_823-410delCACTCCAGCCTG	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	8/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15392799	AAAACAAA others(5): Show AAAACAAACAAAC	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03225.hp2 HG02717.hp1 HG03225.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0060 a0002c0002t0001g0061	2	236	0.0085	-12	c.676 others(29): Show c.676+1302_676+1313delGTTTGTTTGTTT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	6/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15455081	TCACACAC others(5): Show TCACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0071	1	236	0.0042	-12	c.410 others(31): Show c.410-23985_410-23974delTGTGTGTGTGTG	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	3/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15483570	AAAACAAA others(5): Show AAAACAAACAAAC	A A	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0016 a0016	a0016c0022 a0016c0022	a0016c0022t0004 a0016c0022t0004	a0016c0022t0004g0020 a0016c0022t0004g0020	1	236	0.0042	-12	c.410 others(31): Show c.410-52474_410-52463delGTTTGTTTGTTT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	3/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15555290	TATACACA others(5): Show TATACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0031 a0001c0001t0004g0031	1	236	0.0042	-12	c.257 others(29): Show c.257+4839_257+4850delGTGTGTGTGTAT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	2/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15555292	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0053 a0001c0001t0002g0053	1	236	0.0042	-12	c.257 others(29): Show c.257+4837_257+4848delGTGTGTGTGTGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	2/12			chr7	TogoVar
AGO1_chr1_35878209_35935532	35887444	GGGTAAAG others(5): Show GGGTAAAGTAGCT	G G	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0045 a0001c0004t0045	a0001c0004t0045g0058 a0001c0004t0045g0058	1	278	0.0036	-12	c.26- others(25): Show c.26-980_26-969delTAAAGTAGCTGG	AGO1	ENSG00000092847.14	transcript	ENST00000373204.6	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGO2_chr8_140515156_140640633	140552740	GCACACAC others(5): Show GCACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG03139.hp2 NA19087.hp1 others(1): Show HG02071.hp2 HG03139.hp2 NA19087.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0021 a0001c0001 a0001c0021	a0001c0001t0001 a0001c0001t0013 a0001c0001t0105 others(1): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0105 a0001c0021t0028	a0001c0001t0001g0306 a0001c0001t0013g0175 a0001c0001t0105g0055 others(1): Show a0001c0001t0001g0306 a0001c0001t0013g0175 a0001c0001t0105g0055 a0001c0021t0028g0273	4	338	0.0118	-12	c.127 others(31): Show c.1270-1316_1270-1305delTGTGTGTGTGTG	AGO2	ENSG00000123908.12	transcript	ENST00000220592.10	protein_coding	10/18			chr8	TogoVar
AGO2_chr8_140515156_140640633	140607458	TTATATAT others(5): Show TTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01934.hp1 HG02155.hp1 others(12): Show HG00597.hp2 HG01934.hp1 HG02155.hp1 HG02523.hp1 HG02895.hp1 HG02897.hp2 NA18747.hp1 NA18947.hp1 NA19007.hp1 NA19011.hp1 NA19011.hp2 NA19057.hp1 NA19060.hp2 NA19064.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0040 a0001c0002t0004 a0001c0002t0142 a0001c0004t0004 a0001c0004t0005 a0001c0004t0048 a0001c0005t0031	a0001c0001t0001g0011 a0001c0001t0001g0047 a0001c0001t0001g0048 others(12): Show a0001c0001t0001g0011 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0058 a0001c0001t0001g0108 a0001c0001t0003g0054 a0001c0001t0009g0056 a0001c0001t0040g0051 a0001c0002t0004g0151 a0001c0002t0142g0081 a0001c0004t0004g0219 a0001c0004t0005g0101 a0001c0004t0048g0103 a0001c0005t0031g0016 a0001c0005t0031g0017	15	338	0.0444	-12	c.23- others(29): Show c.23-22159_23-22148delTATATATATATA	AGO2	ENSG00000123908.12	transcript	ENST00000220592.10	protein_coding	1/18			chr8	TogoVar
AGO2_chr8_140515156_140640633	140607505	TATATATA others(5): Show TATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0020 a0001c0020	a0001c0020t0056 a0001c0020t0056	a0001c0020t0056g0172 a0001c0020t0056g0172	1	338	0.0030	-12	c.23- others(29): Show c.23-22206_23-22195delGTATATATATAT	AGO2	ENSG00000123908.12	transcript	ENST00000220592.10	protein_coding	1/18			chr8	TogoVar
AGO2_chr8_140515156_140640633	140612220	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02647.hp1 HG01109.hp2 HG02647.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0035 a0001c0007t0074 a0001c0007t0035 a0001c0007t0074	a0001c0007t0035g0187 a0001c0007t0074g0190 a0001c0007t0035g0187 a0001c0007t0074g0190	2	338	0.0059	-12	c.22+ others(29): Show c.22+23253_22+23264delTTTTTTTTTTTT	AGO2	ENSG00000123908.12	transcript	ENST00000220592.10	protein_coding	1/18			chr8	TogoVar
AGO3_chr1_35926105_36077500	35952110	GTCTTTCT others(5): Show GTCTTTCTTTCTT	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03041.hp1 HG03471.hp1 HG02486.hp2 HG03041.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0070 a0001c0001t0086 a0001c0005t0030 a0001c0001t0070 a0001c0001t0086 a0001c0005t0030	a0001c0001t0070g0164 a0001c0001t0086g0029 a0001c0005t0030g0011 a0001c0001t0070g0164 a0001c0001t0086g0029 a0001c0005t0030g0011	3	258	0.0116	-12	c.191 others(29): Show c.191+6277_191+6288delCTTTCTTTCTTT	AGO3	ENSG00000126070.20	transcript	ENST00000373191.9	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGO3_chr1_35926105_36077500	36022920	TCAAAAAA others(5): Show TCAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00323.hp2 others(95): Show HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00544.hp1 HG00558.hp2 HG00609.hp1 HG00642.hp1 HG00673.hp2 HG00741.hp2 HG01071.hp1 HG01074.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp1 HG01433.hp2 HG01884.hp1 HG01928.hp2 HG01943.hp2 HG02004.hp1 HG02027.hp1 HG02040.hp2 HG02056.hp2 HG02080.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02300.hp2 HG02486.hp2 HG02602.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02896.hp1 HG02897.hp2 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03225.hp1 HG03225.hp2 HG03490.hp2 HG03491.hp1 HG03516.hp2 HG03540.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp2 NA18906.hp2 NA18939.hp2 NA18941.hp2 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18954.hp2 NA18964.hp2 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18972.hp2 NA18973.hp2 NA18975.hp2 NA18977.hp2 NA18980.hp1 NA18982.hp2 NA18990.hp1 NA19000.hp1 NA19005.hp2 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19043.hp1 NA19054.hp1 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19062.hp1 NA19063.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19079.hp2 NA19081.hp2 NA19082.hp1 NA19085.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(27): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0013 a0001c0001t0016 a0001c0001t0023 a0001c0001t0033 a0001c0001t0035 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0053 a0001c0001t0055 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0064 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0070 a0001c0001t0071 a0001c0001t0074 a0001c0001t0075 a0001c0001t0086 a0001c0001t0087 a0001c0006t0029	a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 others(95): Show a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0077 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0258 a0001c0001t0003g0064 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0113 a0001c0001t0003g0114 a0001c0001t0003g0115 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0247 a0001c0001t0009g0079 a0001c0001t0009g0087 a0001c0001t0009g0093 a0001c0001t0009g0169 a0001c0001t0009g0176 a0001c0001t0009g0177 a0001c0001t0013g0147 a0001c0001t0013g0148 a0001c0001t0013g0149 a0001c0001t0013g0153 a0001c0001t0016g0161 a0001c0001t0016g0162 a0001c0001t0016g0163 a0001c0001t0023g0082 a0001c0001t0033g0120 a0001c0001t0035g0125 a0001c0001t0049g0007 a0001c0001t0050g0157 a0001c0001t0051g0137 a0001c0001t0053g0145 a0001c0001t0055g0086 a0001c0001t0057g0253 a0001c0001t0058g0131 a0001c0001t0059g0124 a0001c0001t0060g0141 a0001c0001t0061g0116 a0001c0001t0062g0063 a0001c0001t0064g0062 a0001c0001t0065g0085 a0001c0001t0066g0090 a0001c0001t0067g0144 a0001c0001t0070g0164 a0001c0001t0071g0146 a0001c0001t0074g0066 a0001c0001t0075g0097 a0001c0001t0086g0029 a0001c0001t0087g0118 a0001c0006t0029g0013	98	258	0.3798	-12	c.140 others(31): Show c.1407-4170_1407-4159delACAAAAAAAAAA	AGO3	ENSG00000126070.20	transcript	ENST00000373191.9	protein_coding	11/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGO3_chr1_35926105_36077500	36046623	TAAAAAAA others(5): Show TAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02280.hp1 HG02451.hp1 others(3): Show HG02129.hp1 HG02280.hp1 HG02451.hp1 NA18955.hp2 NA18989.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0025 a0001c0001t0010g0027 a0001c0001t0010g0030 others(3): Show a0001c0001t0010g0025 a0001c0001t0010g0027 a0001c0001t0010g0030 a0001c0001t0010g0076 a0001c0001t0010g0142 a0001c0001t0010g0143	6	258	0.0233	-12	c.227 others(31): Show c.2274+3096_2274+3107delAAAAAAAAAAAA	AGO3	ENSG00000126070.20	transcript	ENST00000373191.9	protein_coding	17/18		INFO_REALIGN_3_PRIME	chr1	TogoVar

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