Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
ATE1_chr10_121735424_121933031	121896823	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01255.hp1 HG01346.hp1 others(2): Show HG01081.hp2 HG01255.hp1 HG01346.hp1 HG03834.hp2 HG04204.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0004 a0001c0002t0001 a0001c0002t0004	a0001c0002t0001g0076 a0001c0002t0001g0092 a0001c0002t0004g0074 others(2): Show a0001c0002t0001g0076 a0001c0002t0001g0092 a0001c0002t0004g0074 a0001c0002t0004g0075 a0001c0002t0004g0077	5	320	0.0156	-12	c.942 others(29): Show c.942+3031_942+3042delTTTTTTTTTTTT		ATE1	ENSG00000107669.19	transcript	ENST00000224652.12	protein_coding	7/11						chr10	TogoVar
ATF1_chr12_50759101_50826162	50785284	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00597.hp2 others(94): Show HG00099.hp1 HG00408.hp1 HG00597.hp2 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01256.hp1 HG01257.hp2 HG01358.hp2 HG01433.hp1 HG01517.hp1 HG01934.hp2 HG01975.hp1 HG02015.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp2 HG02129.hp1 HG02155.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG03195.hp1 HG03209.hp2 HG03239.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03669.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18947.hp2 NA18949.hp2 NA18951.hp1 NA18953.hp2 NA18955.hp2 NA18963.hp2 NA18968.hp1 NA18969.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18979.hp1 NA18980.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18989.hp1 NA18990.hp2 NA18993.hp2 NA18995.hp1 NA19003.hp1 NA19007.hp1 NA19011.hp1 NA19056.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp2 NA19065.hp1 NA19072.hp1 NA19072.hp2 NA19077.hp2 NA19080.hp2 NA19081.hp1 NA19085.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp2 NA20805.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0017 a0001c0002t0002 a0001c0004t0002	a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0014 others(87): Show a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0023 a0001c0001t0001g0212 a0001c0001t0001g0215 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0251 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0263 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0278 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0313 a0001c0001t0001g0314 a0001c0001t0001g0323 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0026 a0001c0001t0003g0042 a0001c0001t0003g0047 a0001c0001t0003g0058 a0001c0001t0003g0064 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0073 a0001c0001t0003g0087 a0001c0001t0003g0091 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0094 a0001c0001t0003g0262 a0001c0001t0003g0362 a0001c0001t0004g0349 a0001c0001t0008g0248 a0001c0001t0008g0250 a0001c0001t0009g0165 a0001c0001t0012g0001 a0001c0001t0017g0280 a0001c0002t0002g0012 a0001c0002t0002g0119 a0001c0002t0002g0167 a0001c0002t0002g0174 a0001c0002t0002g0175 a0001c0002t0002g0188 a0001c0002t0002g0189 a0001c0002t0002g0194 a0001c0002t0002g0195 a0001c0002t0002g0196 a0001c0002t0002g0197 a0001c0002t0002g0198 a0001c0002t0002g0207 a0001c0004t0002g0199	97	382	0.2539	-12	c.93+ others(27): Show c.93+5090_93+5101delCACACACACACA		ATF1	ENSG00000123268.9	transcript	ENST00000262053.8	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF1_chr12_50759101_50826162	50823626	ATATAATA others(5): Show ATATAATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG02258.hp1 HG03486.hp2 HG02145.hp2 HG02258.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0015 a0001c0001t0009 a0001c0001t0015	a0001c0001t0009g0164 a0001c0001t0009g0165 a0001c0001t0015g0163 a0001c0001t0009g0164 a0001c0001t0009g0165 a0001c0001t0015g0163	3	382	0.0079	-12	c.38 others(23): Show c.3848_*3859delTATAATATATAT		ATF1	ENSG00000123268.9	transcript	ENST00000262053.8	protein_coding					2465		chr12	TogoVar
ATF1_chr12_50759101_50826162	50823631	ATATATAT others(5): Show ATATATATTATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18967.hp2 NA19001.hp2 NA19009.hp2 others(2): Show NA18967.hp2 NA19001.hp2 NA19009.hp2 NA19057.hp2 NA19068.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0011 a0001c0002t0002 a0001c0002t0011	a0001c0002t0002g0183 a0001c0002t0002g0201 a0001c0002t0002g0202 others(2): Show a0001c0002t0002g0183 a0001c0002t0002g0201 a0001c0002t0002g0202 a0001c0002t0002g0203 a0001c0002t0011g0209	5	382	0.0131	-12	c.38 others(23): Show c.3853_*3864delTATATATTATAT		ATF1	ENSG00000123268.9	transcript	ENST00000262053.8	protein_coding					2470		chr12	TogoVar
ATF2_chr2_175067259_175173203	175085587	CACACACA others(5): Show CACACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02717.hp2 HG02630.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0148 a0001c0001t0003g0149	2	224	0.0089	-12	c.118 others(31): Show c.1186-4834_1186-4823delTTGTGTGTGTGT		ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	12/13						chr2	TogoVar
ATF2_chr2_175067259_175173203	175094403	GAAAAAAA others(5): Show GAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0220 a0001c0001t0001g0220	1	224	0.0045	-12	c.979 others(29): Show c.979-1148_979-1137delTTTTTTTTTTTT		ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	11/13						chr2	TogoVar
ATF2_chr2_175067259_175173203	175142685	AAGAGAGA others(5): Show AAGAGAGAGAGAG	A A	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0143 a0001c0001t0003g0143	1	224	0.0045	-12	c.-43 others(29): Show c.-43-6211_-43-6200delCTCTCTCTCTCT		ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	2/13						chr2	TogoVar
ATF2_chr2_175067259_175173203	175142710	AGAGAGAG others(5): Show AGAGAGAGAGAGT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01891.hp1 HG02109.hp1 others(10): Show HG00735.hp1 HG01891.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02895.hp1 HG03130.hp1 HG03486.hp1 NA18522.hp1 NA18906.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0002 a0001c0001t0003g0141 a0001c0001t0003g0142 others(9): Show a0001c0001t0003g0002 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0144 a0001c0001t0003g0145 a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0150 a0001c0001t0003g0154 a0001c0001t0003g0200	13	224	0.0580	-12	c.-43 others(29): Show c.-43-6236_-43-6225delACTCTCTCTCTC		ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	2/13						chr2	TogoVar
ATF2_chr2_175067259_175173203	175163174	AATAAATA others(5): Show AATAAATAAATGC	A A	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02738.hp1 HG03195.hp1 others(4): Show HG01433.hp1 HG02738.hp1 HG03195.hp1 NA18985.hp1 NA18990.hp2 NA19054.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0013 a0001c0001t0001g0063 a0001c0001t0001g0064 others(4): Show a0001c0001t0001g0013 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0105 a0001c0001t0001g0114 a0001c0001t0004g0201	7	224	0.0313	-12	c.-14 others(31): Show c.-143+4864_-143+4875delGCATTTATTTAT		ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	1/13						chr2	TogoVar
ATF2_chr2_175067259_175173203	175170518	ATGTGTAT others(5): Show ATGTGTATATATG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0032	1	224	0.0045	-12	c.-26 others(23): Show c.-2623_-2612delCATATATACACA		ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding					2316		chr2	TogoVar
ATF2_chr2_175067259_175173203	175171785	CAAGGGAG others(5): Show CAAGGGAGGTCTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18994.hp1 NA18994.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0216 a0001c0001t0001g0216	1	224	0.0045	-12	c.-38 others(23): Show c.-3890_-3879delCAGACCTCCCTT		ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding					3583		chr2	TogoVar
ATF4_chr22_39515562_39527683	39523993	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp2 HG03516.hp1 NA18906.hp1 others(2): Show HG02895.hp2 HG03516.hp1 NA18906.hp1 NA19240.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	5	354	0.0141	-12	c.13 others(23): Show c.1392_*1403delTTTTTTTTTTTT		ATF4	ENSG00000128272.18	transcript	ENST00000674920.3	protein_coding					1311		chr22	TogoVar
ATF6_chr1_161761320_161969070	161811758	ACCATCCA others(5): Show ACCATCCATCCAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02809.hp2 HG02922.hp1 others(3): Show HG02109.hp1 HG02809.hp2 HG02922.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp1	a0004 a0004	a0004c0006 a0004c0007 a0004c0006 a0004c0007	a0004c0006t0027 a0004c0006t0055 a0004c0006t0059 others(1): Show a0004c0006t0027 a0004c0006t0055 a0004c0006t0059 a0004c0007t0001	a0004c0006t0027g0235 a0004c0006t0055g0236 a0004c0006t0059g0237 others(2): Show a0004c0006t0027g0235 a0004c0006t0055g0236 a0004c0006t0059g0237 a0004c0007t0001g0004 a0004c0007t0001g0315	6	332	0.0181	-12	c.910 others(29): Show c.910-7854_910-7843delCCATCCATCCAT		ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	7/15					INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161812371	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02280.hp1 HG02451.hp1 others(4): Show HG01243.hp1 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02922.hp2 HG02976.hp1 NA19063.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0011 a0001c0001t0028 a0001c0001t0065 others(1): Show a0001c0001t0011 a0001c0001t0028 a0001c0001t0065 a0002c0003t0002	a0001c0001t0011g0320 a0001c0001t0011g0321 a0001c0001t0011g0325 others(4): Show a0001c0001t0011g0320 a0001c0001t0011g0321 a0001c0001t0011g0325 a0001c0001t0028g0319 a0001c0001t0028g0324 a0001c0001t0065g0322 a0002c0003t0002g0248	7	332	0.0211	-12	c.910 others(29): Show c.910-7234_910-7223delTTTTTTTTTTTT		ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	7/15					INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161815650	GATTGATA others(5): Show GATTGATAATTAA	G G	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18957.hp2 NA18986.hp1 others(3): Show NA18747.hp1 NA18957.hp2 NA18986.hp1 NA18999.hp1 NA19003.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0002t0003 a0001c0001t0002 a0001c0002t0001 a0001c0002t0003	a0001c0001t0002g0015 a0001c0002t0001g0017 a0001c0002t0001g0019 others(3): Show a0001c0001t0002g0015 a0001c0002t0001g0017 a0001c0002t0001g0019 a0001c0002t0001g0021 a0001c0002t0001g0022 a0001c0002t0003g0033	6	332	0.0181	-12	c.910 others(29): Show c.910-3967_910-3956delGATAATTAAATT		ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	7/15					INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161894521	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0325 a0001c0001t0011g0325	1	332	0.0030	-12	c.172 others(33): Show c.1720-17753_1720-17742delTTTTTTTTTTTT		ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	14/15					INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF7IP2_chr16_10381061_10488638	10385580	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0142 a0002c0001t0002g0142	1	376	0.0027	-12	c.-78 others(21): Show c.-783_-772delAAAAAAAAAAAA		ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding					480		chr16	TogoVar
ATF7IP2_chr16_10381061_10488638	10386929	TGTTGAAA others(5): Show TGTTGAAAATGAA	T T	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18953.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0364 a0001c0002t0003g0364	1	376	0.0027	-12	c.-24 others(29): Show c.-242+811_-242+822delGAAAATGAAGTT		ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	1/13					INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7IP2_chr16_10381061_10488638	10464824	CTGTTGTT others(5): Show CTGTTGTTGATGT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02723.hp1 HG02965.hp2 others(1): Show HG02559.hp2 HG02723.hp1 HG02965.hp2 HG03225.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0011 a0001c0007t0011	a0001c0007t0011g0352 a0001c0007t0011g0353 a0001c0007t0011g0354 others(1): Show a0001c0007t0011g0352 a0001c0007t0011g0353 a0001c0007t0011g0354 a0001c0007t0011g0355	4	376	0.0106	-12	c.135 others(31): Show c.1353-7278_1353-7267delGATGTTGTTGTT		ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	9/13					INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7IP2_chr16_10381061_10488638	10473936	AACTTGAT others(5): Show AACTTGATTCTAT	A A	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	NA18612.hp1 NA18612.hp1	a0008 a0008	a0008c0020 a0008c0020	a0008c0020t0002 a0008c0020t0002	a0008c0020t0002g0006 a0008c0020t0002g0006	1	376	0.0027	-12	c.149 others(21): Show c.1498_1509delCTTGATTCTATA	p.Leu others(13): Show p.Leu500_Ile503del	ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	12/14	1801/3741	1498/2049	500/682		INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7IP2_chr16_10381061_10488638	10479958	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02895.hp1 NA19240.hp1 HG01433.hp2 HG02895.hp1 NA19240.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0002 a0002c0008 a0007c0018 a0001c0002 a0002c0008 a0007c0018	a0001c0002t0003 a0002c0008t0010 a0007c0018t0010 a0001c0002t0003 a0002c0008t0010 a0007c0018t0010	a0001c0002t0003g0313 a0002c0008t0010g0033 a0007c0018t0010g0035 a0001c0002t0003g0313 a0002c0008t0010g0033 a0007c0018t0010g0035	3	376	0.0080	-12	c.155 others(29): Show c.1550-889_1550-878delTTTTTTTTTTTT		ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	12/13					INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7IP_chr12_14360682_14507930	14422312	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02723.hp1 HG02896.hp1 others(11): Show HG02630.hp1 HG02723.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02970.hp1 HG03098.hp1 HG03139.hp2 HG03453.hp2 HG03516.hp1 HG03579.hp2 HG04228.hp2 HG06807.hp1 NA19030.hp1	a0003 a0005 a0006 a0003 a0005 a0006	a0003c0003 a0005c0007 a0006c0009 a0003c0003 a0005c0007 a0006c0009	a0003c0003t0011 a0003c0003t0012 a0003c0003t0035 others(2): Show a0003c0003t0011 a0003c0003t0012 a0003c0003t0035 a0005c0007t0010 a0006c0009t0005	a0003c0003t0011g0184 a0003c0003t0012g0001 a0003c0003t0012g0179 others(9): Show a0003c0003t0011g0184 a0003c0003t0012g0001 a0003c0003t0012g0179 a0003c0003t0012g0181 a0003c0003t0035g0343 a0005c0007t0010g0321 a0006c0009t0005g0173 a0006c0009t0005g0174 a0006c0009t0005g0175 a0006c0009t0005g0176 a0006c0009t0005g0177 a0006c0009t0005g0178	14	346	0.0405	-12	c.-7- others(27): Show c.-7-1563_-7-1552delCACACACACACA		ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	1/14					INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14439840	AATCCATC others(5): Show AATCCATCCATCC	A A	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01891.hp1 HG02055.hp2 others(11): Show HG01167.hp2 HG01891.hp1 HG02055.hp2 HG02280.hp1 HG02451.hp1 HG02486.hp2 HG02559.hp1 HG02818.hp1 HG03041.hp2 HG03471.hp1 HG03486.hp1 HG03579.hp2 NA18906.hp2 NA19043.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0001c0020 a0002c0002 others(2): Show a0001c0001 a0001c0020 a0002c0002 a0003c0003 a0008c0011	a0001c0001t0002 a0001c0020t0036 a0002c0002t0001 others(3): Show a0001c0001t0002 a0001c0020t0036 a0002c0002t0001 a0003c0003t0011 a0003c0003t0028 a0008c0011t0024	a0001c0001t0002g0084 a0001c0001t0002g0118 a0001c0001t0002g0119 others(11): Show a0001c0001t0002g0084 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0020t0036g0131 a0002c0002t0001g0298 a0003c0003t0011g0184 a0003c0003t0011g0204 a0003c0003t0011g0314 a0003c0003t0011g0315 a0003c0003t0011g0324 a0003c0003t0011g0341 a0003c0003t0028g0183 a0008c0011t0024g0147 a0008c0011t0024g0148	14	346	0.0405	-12	c.192 others(31): Show c.1929+1610_1929+1621delATCCATCCATCC		ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	5/14					INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494284	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01496.hp1 HG02622.hp2 others(2): Show HG01109.hp2 HG01496.hp1 HG02622.hp2 HG02965.hp1 HG03516.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0005 a0001c0001 a0002c0002 a0003c0005	a0001c0001t0002 a0002c0002t0009 a0003c0005t0007 a0001c0001t0002 a0002c0002t0009 a0003c0005t0007	a0001c0001t0002g0025 a0002c0002t0009g0005 a0002c0002t0009g0288 others(2): Show a0001c0001t0002g0025 a0002c0002t0009g0005 a0002c0002t0009g0288 a0002c0002t0009g0289 a0003c0005t0007g0326	5	346	0.0145	-12	c.328 others(31): Show c.3281-1908_3281-1897delATATATATATAT		ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14					INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7_chr12_53507054_53631382	53539686	CAATGAAT others(5): Show CAATGAATGAATG	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01109.hp2 HG01175.hp1 others(17): Show HG01099.hp1 HG01109.hp2 HG01175.hp1 HG02055.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02486.hp2 HG02572.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02809.hp2 HG02976.hp1 HG03098.hp1 HG03225.hp1 HG03516.hp2 HG03831.hp1 HG04115.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0014 a0001c0001t0016 others(1): Show a0001c0001t0001 a0001c0001t0014 a0001c0001t0016 a0001c0002t0003	a0001c0001t0001g0029 a0001c0001t0001g0042 a0001c0001t0001g0043 others(17): Show a0001c0001t0001g0029 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0014g0030 a0001c0001t0016g0308 a0001c0002t0003g0189	20	330	0.0606	-12	c.265 others(29): Show c.265-2146_265-2135delCATTCATTCATT		ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	4/11						chr12	TogoVar
ATF7_chr12_53507054_53631382	53547747	TTATGTAT others(5): Show TTATGTATGTATG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00408.hp2 others(125): Show HG00140.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00639.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG01070.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01358.hp2 HG01361.hp2 HG01496.hp2 HG01515.hp1 HG01928.hp1 HG01934.hp2 HG02015.hp1 HG02056.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02129.hp2 HG02135.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp2 HG02523.hp2 HG02602.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02735.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02922.hp2 HG03017.hp1 HG03130.hp1 HG03195.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03516.hp1 HG03654.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG04184.hp1 NA18941.hp2 NA18943.hp2 NA18944.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18960.hp2 NA18962.hp2 NA18964.hp2 NA18965.hp2 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp2 NA18989.hp1 NA18991.hp2 NA18993.hp2 NA18994.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19062.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19080.hp2 NA19081.hp2 NA19086.hp1 NA19087.hp2 NA19088.hp2 NA19090.hp1 NA19240.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0029 a0001c0002t0003 a0001c0002t0005	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 others(125): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0056 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0183 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0313 a0001c0001t0001g0314 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0111 a0001c0001t0003g0165 a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0178 a0001c0001t0003g0184 a0001c0001t0003g0185 a0001c0001t0003g0322 a0001c0001t0003g0323 a0001c0001t0004g0025 a0001c0001t0004g0160 a0001c0001t0004g0161 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0192 a0001c0001t0012g0254 a0001c0001t0012g0284 a0001c0001t0016g0308 a0001c0001t0017g0173 a0001c0001t0018g0273 a0001c0001t0019g0290 a0001c0001t0020g0316 a0001c0001t0022g0169 a0001c0001t0023g0302 a0001c0001t0024g0239 a0001c0001t0025g0315 a0001c0001t0029g0236 a0001c0002t0003g0189 a0001c0002t0005g0159 a0001c0002t0005g0166 a0001c0002t0005g0171 a0001c0002t0005g0172 a0001c0002t0005g0181 a0001c0002t0005g0182	128	330	0.3879	-12	c.146 others(29): Show c.146-4311_146-4300delCATACATACATA		ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	3/11						chr12	TogoVar
ATF7_chr12_53507054_53631382	53550327	AAAAAAAA others(5): Show AAAAAAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	330	0.0030	-12	c.145 others(29): Show c.145+2202_145+2213delATTTATTTTTTT		ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	3/11						chr12	TogoVar
ATF7_chr12_53507054_53631382	53555490	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00639.hp2 HG00733.hp1 others(22): Show HG00099.hp1 HG00639.hp2 HG00733.hp1 HG00735.hp1 HG00741.hp1 HG01070.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01175.hp2 HG01256.hp1 HG01361.hp1 HG01515.hp2 HG01928.hp2 HG01952.hp1 HG02148.hp1 HG03017.hp2 HG03942.hp1 HG04199.hp2 NA18943.hp1 NA18969.hp1 NA19043.hp1 NA20300.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0010 a0001c0005t0001 a0001c0001t0001 a0001c0001t0010 a0001c0005t0001	a0001c0001t0001g0019 a0001c0001t0001g0040 a0001c0001t0001g0057 others(22): Show a0001c0001t0001g0019 a0001c0001t0001g0040 a0001c0001t0001g0057 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0146 a0001c0001t0010g0070 a0001c0001t0010g0071 a0001c0001t0010g0072 a0001c0005t0001g0068	25	330	0.0758	-12	c.49- others(27): Show c.49-2865_49-2854delAAAAAAAAAAAA		ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11						chr12	TogoVar
ATF7_chr12_53507054_53631382	53570729	CTGTGTGC others(5): Show CTGTGTGCGTGTG	C C	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0129 a0001c0001t0002g0129	1	330	0.0030	-12	c.49- others(29): Show c.49-18104_49-18093delCACACGCACACA		ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11						chr12	TogoVar
ATF7_chr12_53507054_53631382	53570736	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0272 a0001c0001t0001g0272	1	330	0.0030	-12	c.49- others(29): Show c.49-18111_49-18100delACACACACACAC		ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11						chr12	TogoVar
ATF7_chr12_53507054_53631382	53585721	ACACTGAT others(5): Show ACACTGATTTTTC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	330	0.0030	-12	c.48+ others(29): Show c.48+15220_48+15231delGAAAAATCAGTG		ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11						chr12	TogoVar
ATG10_chr5_81967023_82261133	82037234	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0026 a0008c0008t0026	a0008c0008t0026g0208 a0008c0008t0026g0208	1	226	0.0044	-12	c.109 others(31): Show c.109-21241_109-21230delTTTTTTTTTTTT		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82050839	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0135	1	226	0.0044	-12	c.109 others(29): Show c.109-7637_109-7626delAAAAAAAAAAAA		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82119984	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG03540.hp1 HG02895.hp1 HG02897.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134	3	226	0.0133	-12	c.217 others(31): Show c.217-44391_217-44380delGTGTGTGTGTGT		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82138840	TCCCTCCC others(5): Show TCCCTCCCCCTCC	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp2 HG02109.hp2 others(17): Show HG01099.hp1 HG01099.hp2 HG02109.hp2 HG02572.hp2 HG02602.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02896.hp2 HG02970.hp1 HG03453.hp1 HG03516.hp2 NA18939.hp2 NA18951.hp1 NA18972.hp2 NA18974.hp1 NA19030.hp1 NA19240.hp2 NA20129.hp1 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 others(6): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 a0002c0002t0004 a0002c0002t0006 a0002c0002t0013 a0002c0002t0015 a0002c0002t0028 a0002c0002t0033	a0001c0001t0001g0211 a0001c0001t0003g0127 a0001c0001t0003g0129 others(17): Show a0001c0001t0001g0211 a0001c0001t0003g0127 a0001c0001t0003g0129 a0001c0001t0003g0144 a0002c0002t0002g0125 a0002c0002t0002g0126 a0002c0002t0002g0128 a0002c0002t0004g0046 a0002c0002t0004g0052 a0002c0002t0004g0083 a0002c0002t0004g0210 a0002c0002t0004g0212 a0002c0002t0004g0213 a0002c0002t0004g0215 a0002c0002t0006g0064 a0002c0002t0013g0124 a0002c0002t0015g0070 a0002c0002t0015g0209 a0002c0002t0028g0214 a0002c0002t0033g0057	20	226	0.0885	-12	c.217 others(31): Show c.217-25529_217-25518delCCCCTCCCCCTC		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82190773	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03130.hp2 HG03579.hp2 HG02809.hp2 HG03130.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0014 a0001c0001t0009 a0001c0001t0014	a0001c0001t0009g0218 a0001c0001t0014g0217 a0001c0001t0014g0219 a0001c0001t0009g0218 a0001c0001t0014g0217 a0001c0001t0014g0219	3	226	0.0133	-12	c.453 others(31): Show c.453+12206_453+12217delAAAAAAAAAAAA		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82197720	TTCTATCT others(5): Show TTCTATCTATCTA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01255.hp1 HG01261.hp2 others(4): Show HG01243.hp2 HG01255.hp1 HG01261.hp2 HG01358.hp2 HG02280.hp2 HG02602.hp1 HG06807.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 others(1): Show a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 a0003c0003t0001	a0001c0001t0001g0135 a0002c0002t0002g0115 a0002c0002t0004g0117 others(4): Show a0001c0001t0001g0135 a0002c0002t0002g0115 a0002c0002t0004g0117 a0003c0003t0001g0191 a0003c0003t0001g0202 a0003c0003t0001g0203 a0003c0003t0001g0205	7	226	0.0310	-12	c.453 others(31): Show c.453+19177_453+19188delATCTATCTATCT		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82200864	ATTATTTA others(5): Show ATTATTTATTTAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01192.hp2 HG01346.hp1 others(5): Show HG00323.hp1 HG01192.hp2 HG01346.hp1 HG01981.hp1 HG02698.hp1 NA18939.hp1 NA18962.hp2 NA18984.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0010 a0005c0005t0029 a0005c0005t0010 a0005c0005t0029	a0005c0005t0010g0001 a0005c0005t0010g0002 a0005c0005t0010g0003 others(5): Show a0005c0005t0010g0001 a0005c0005t0010g0002 a0005c0005t0010g0003 a0005c0005t0010g0006 a0005c0005t0010g0007 a0005c0005t0010g0008 a0005c0005t0010g0068 a0005c0005t0029g0005	8	226	0.0354	-12	c.453 others(31): Show c.453+22308_453+22319delATTTATTTATTT		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82218052	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0030 a0001c0001t0005g0030	1	226	0.0044	-12	c.454 others(31): Show c.454-34486_454-34475delCACACACACACA		ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG12_chr5_115823200_115846565	115845836	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp1 HG02615.hp1 HG02738.hp1 others(2): Show HG01257.hp1 HG02615.hp1 HG02738.hp1 HG02896.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0034 a0001c0001t0001 a0001c0001t0009 a0001c0001t0034	a0001c0001t0001g0023 a0001c0001t0009g0120 a0001c0001t0034g0069 a0001c0001t0001g0023 a0001c0001t0009g0120 a0001c0001t0034g0069	5	402	0.0124	-12	c.-42 others(23): Show c.-4296_-4285delTTTTTTTTTTTT		ATG12	ENSG00000145782.13	transcript	ENST00000509910.2	protein_coding					4272		chr5	TogoVar
ATG13_chr11_46612553_46679518	46616831	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00609.hp1 HG00673.hp1 others(21): Show HG00099.hp2 HG00609.hp1 HG00673.hp1 HG00738.hp1 HG01069.hp2 HG01099.hp2 HG01123.hp1 HG01169.hp1 HG01258.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp1 HG02004.hp2 HG02040.hp1 HG03654.hp1 HG03710.hp2 NA18522.hp2 NA18942.hp2 NA18971.hp1 NA19068.hp2 NA19082.hp2 NA19084.hp1 NA19091.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0010 a0001c0001t0017 others(3): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0017 a0001c0001t0018 a0001c0001t0022 a0001c0004t0001	a0001c0001t0001g0076 a0001c0001t0001g0085 a0001c0001t0001g0086 others(21): Show a0001c0001t0001g0076 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0179 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0010g0083 a0001c0001t0010g0084 a0001c0001t0017g0174 a0001c0001t0018g0087 a0001c0001t0022g0165 a0001c0004t0001g0177	24	218	0.1101	-12	c.-11 others(23): Show c.-1128_-1117delAAAAAAAAAAAA		ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding					721		chr11	TogoVar
ATG13_chr11_46612553_46679518	46619372	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01081.hp1 HG01192.hp2 others(15): Show HG01070.hp2 HG01081.hp1 HG01192.hp2 HG01361.hp2 HG01496.hp2 HG02004.hp1 HG02602.hp1 HG03654.hp2 NA18942.hp1 NA18960.hp2 NA18964.hp2 NA18978.hp1 NA18984.hp1 NA18990.hp1 NA19010.hp2 NA19082.hp1 NA19083.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0005 a0001c0001t0002g0006 others(14): Show a0001c0001t0002g0001 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020	18	218	0.0826	-12	c.-70 others(29): Show c.-70+1500_-70+1511delTTTTTTTTTTTT		ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18					INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG13_chr11_46612553_46679518	46622076	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02886.hp2 HG03041.hp2 others(2): Show HG02280.hp1 HG02886.hp2 HG03041.hp2 HG03579.hp1 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0005 a0001c0001t0001 a0001c0002t0005	a0001c0001t0001g0086 a0001c0001t0001g0141 a0001c0001t0001g0160 others(2): Show a0001c0001t0001g0086 a0001c0001t0001g0141 a0001c0001t0001g0160 a0001c0002t0005g0215 a0001c0002t0005g0216	5	218	0.0229	-12	c.-70 others(29): Show c.-70+4227_-70+4238delATATATATATAT		ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18					INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG14_chr14_55361391_55416830	55375490	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01175.hp1 HG01243.hp2 others(3): Show HG01106.hp1 HG01175.hp1 HG01243.hp2 HG02257.hp1 HG03041.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0022 a0001c0001t0036 others(1): Show a0001c0001t0021 a0001c0001t0022 a0001c0001t0036 a0001c0001t0038	a0001c0001t0021g0187 a0001c0001t0021g0188 a0001c0001t0022g0183 others(3): Show a0001c0001t0021g0187 a0001c0001t0021g0188 a0001c0001t0022g0183 a0001c0001t0022g0184 a0001c0001t0036g0132 a0001c0001t0038g0185	6	366	0.0164	-12	c.117 others(31): Show c.1172+2317_1172+2328delAAAAAAAAAAAA		ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	9/9						chr14	TogoVar
ATG14_chr14_55361391_55416830	55402920	AAAAAAAA others(5): Show AAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0188 a0001c0001t0021g0188	1	366	0.0027	-12	c.222 others(29): Show c.222-5498_222-5487delATATATTTTTTT		ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9						chr14	TogoVar
ATG14_chr14_55361391_55416830	55402922	AAAAAATA others(5): Show AAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18986.hp2 NA19002.hp1 NA19003.hp1 NA18986.hp2 NA19002.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0157 a0001c0001t0002g0205 a0001c0001t0002g0225 a0001c0001t0001g0157 a0001c0001t0002g0205 a0001c0001t0002g0225	3	366	0.0082	-12	c.222 others(29): Show c.222-5500_222-5489delATATATATTTTT		ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9						chr14	TogoVar
ATG14_chr14_55361391_55416830	55402924	AAAATATA others(5): Show AAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02630.hp2 HG04228.hp1 HG01243.hp2 HG02630.hp2 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0019 a0001c0001t0036 a0001c0002t0002 a0001c0001t0019 a0001c0001t0036 a0001c0002t0002	a0001c0001t0019g0182 a0001c0001t0036g0132 a0001c0002t0002g0100 a0001c0001t0019g0182 a0001c0001t0036g0132 a0001c0002t0002g0100	3	366	0.0082	-12	c.222 others(29): Show c.222-5502_222-5491delATATATATATTT		ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9						chr14	TogoVar
ATG16L1_chr2_233246673_233300669	233266198	GGGAGGCG others(5): Show GGGAGGCGGAGGC	G G	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02965.hp2 HG01358.hp1 HG02965.hp2	a0001 a0002 a0001 a0002	a0001c0005 a0002c0002 a0001c0005 a0002c0002	a0001c0005t0003 a0002c0002t0016 a0001c0005t0003 a0002c0002t0016	a0001c0005t0003g0092 a0002c0002t0016g0284 a0001c0005t0003g0092 a0002c0002t0016g0284	2	354	0.0057	-12	c.641 others(29): Show c.641+1076_641+1087delAGGCGGAGGCGG		ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding	5/17					INFO_REALIGN_3_PRIME	chr2	TogoVar
ATG2B_chr14_96274195_96368341	96308245	TATATATA others(5): Show TATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0054 a0001c0002t0054	a0001c0002t0054g0306 a0001c0002t0054g0306	1	356	0.0028	-12	c.430 others(31): Show c.4303+1196_4303+1207delGTGTGTATATAT		ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	29/41						chr14	TogoVar
ATG2B_chr14_96274195_96368341	96327230	CAATAATA others(5): Show CAATAATAATAAT	C C	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0005 a0002c0001t0005	a0002c0001t0005g0180 a0002c0001t0005g0180	1	356	0.0028	-12	c.216 others(31): Show c.2163+1105_2163+1116delATTATTATTATT		ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	14/41						chr14	TogoVar

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