view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GALM_chr2_38661114_38739765 | 38703086 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG00738.hp1 HG01070.hp1 HG01071.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0034 a0001c0001t0002g0015 a0001c0001t0002g0016 others(14): Show |
17 | 328 | 0.0518 | -13 | c.634 others(32): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALM_chr2_38661114_38739765 | 38726217 | TTTTTTTT others(6): Show |
T | intron_variant | MODIFIER | HG01192.hp1 HG02572.hp2 HG02922.hp1 |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0002a0001c0003t0005a0002c0002t0012 | a0001c0001t0002g0188 a0001c0003t0005g0215 a0002c0002t0012g0326 |
3 | 328 | 0.0092 | -13 | c.635 others(30): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT11_chr7_152020674_152127340 | 152099530 | GTTTTTTT others(6): Show |
G | intron_variant | MODIFIER | HG02683.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0016 | 1 | 284 | 0.0035 | -13 | c.296 others(30): Show |
GALNT11 | ENSG00000178234.13 | transcript | ENST00000430044.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT11_chr7_152020674_152127340 | 152113712 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG02071.hp1 HG02622.hp2 HG03041.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0015 a0001c0001t0001g0097 a0001c0001t0001g0116 others(5): Show |
8 | 284 | 0.0282 | -13 | c.123 others(30): Show |
GALNT11 | ENSG00000178234.13 | transcript | ENST00000430044.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT13_chr2_153866922_154458979 | 154043415 | TATATATA others(6): Show |
T | intron_variant | MODIFIER | HG01099.hp1 HG02486.hp1 HG02602.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0006a0001c0001t0015others(3): Show | a0001c0001t0003g0029 a0001c0001t0006g0137 a0001c0001t0015g0015 others(4): Show |
7 | 214 | 0.0327 | -13 | c.143 others(32): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | chr2 | TogoVar | |||||||
GALNT13_chr2_153866922_154458979 | 154092075 | GAAAAAAA others(6): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00738.hp1 HG01074.hp2 others(27): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(14): Show | a0001c0001t0002g0107 a0001c0001t0004g0183 a0001c0001t0006g0110 others(27): Show |
30 | 214 | 0.1402 | -13 | c.143 others(32): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT13_chr2_153866922_154458979 | 154124248 | ATTAAAAA others(6): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00738.hp1 HG01074.hp2 others(28): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(15): Show | a0001c0001t0002g0107 a0001c0001t0004g0183 a0001c0001t0006g0110 others(28): Show |
31 | 214 | 0.1449 | -13 | c.143 others(32): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT13_chr2_153866922_154458979 | 154354405 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG02080.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0010a0001c0001t0011others(4): Show | a0001c0001t0007g0192 a0001c0001t0007g0194 a0001c0001t0010g0202 others(6): Show |
9 | 214 | 0.0421 | -13 | c.115 others(34): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 30977330 | ATCCGCCC others(6): Show |
A | intron_variant | MODIFIER | NA19002.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0161 | 1 | 226 | 0.0044 | -13 | c.300 others(32): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 2/14 | chr2 | TogoVar | |||||||
GALNT15_chr3_16169680_16235165 | 16201163 | TTTTTTTC others(6): Show |
T | intron_variant | MODIFIER | HG01928.hp1 HG01928.hp2 HG01943.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0297 a0001c0001t0002g0316 a0001c0001t0004g0012 others(10): Show |
14 | 388 | 0.0361 | -13 | c.911 others(28): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
GALNT15_chr3_16169680_16235165 | 16207531 | AAAAAAAA others(6): Show |
A | intron_variant | MODIFIER | HG00544.hp2 HG00639.hp2 HG00735.hp2 others(62): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0016others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(25): Show | a0001c0001t0001g0154 a0001c0001t0001g0244 a0001c0001t0001g0246 others(60): Show |
65 | 388 | 0.1675 | -13 | c.912 others(28): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 3/9 | chr3 | TogoVar | |||||||
GALNT16_chr14_69255158_69359466 | 69322924 | GGGTGTGT others(6): Show |
G | intron_variant | MODIFIER | HG01175.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0240 | 1 | 306 | 0.0033 | -13 | c.336 others(30): Show |
GALNT16 | ENSG00000100626.17 | transcript | ENST00000448469.8 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
GALNT17_chr7_71127144_71718599 | 71265114 | ATATATTT others(6): Show |
A | intron_variant | MODIFIER | HG02040.hp2 NA19000.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0007 | a0001c0001t0006g0056 a0001c0002t0007g0060 |
2 | 76 | 0.0263 | -13 | c.239 others(32): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT17_chr7_71127144_71718599 | 71265116 | ATATTTTT others(6): Show |
A | intron_variant | MODIFIER | HG00642.hp2 HG00735.hp1 HG01106.hp1 others(3): Show |
a0001 | a0001c0001a0001c0004a0001c0008 | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(3): Show | a0001c0001t0001g0041 a0001c0001t0004g0029 a0001c0001t0011g0040 others(3): Show |
6 | 76 | 0.0790 | -13 | c.239 others(32): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT17_chr7_71127144_71718599 | 71265118 | ATTTTTTT others(6): Show |
A | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0021 | 1 | 76 | 0.0132 | -13 | c.239 others(32): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT17_chr7_71127144_71718599 | 71540093 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG03490.hp2 HG03492.hp1 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0028 a0001c0001t0004g0029 |
2 | 76 | 0.0263 | -13 | c.963 others(32): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT17_chr7_71127144_71718599 | 71693185 | TGTGTGTG others(6): Show |
T | intron_variant | MODIFIER | HG00323.hp2 HG00738.hp1 HG00741.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0004a0001c0001t0007others(4): Show | a0001c0001t0003g0001 a0001c0001t0004g0033 a0001c0001t0004g0035 others(7): Show |
10 | 76 | 0.1316 | -13 | c.150 others(34): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT5_chr2_157252705_157323491 | 157256570 | ATATATAT others(6): Show |
A | upstream_gene_variant | MODIFIER | NA19240.hp1 NA20129.hp2 |
a0004 | a0004c0006 | a0004c0006t0013a0004c0006t0085 | a0004c0006t0013g0180 a0004c0006t0085g0181 |
2 | 282 | 0.0071 | -13 | c.-15 others(24): Show |
GALNT5 | ENSG00000136542.9 | transcript | ENST00000259056.5 | protein_coding | 1134 | chr2 | TogoVar | |||||||
GALNT6_chr12_51346252_51396406 | 51346603 | ACTGGACC others(6): Show |
A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(195): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(59): Show | a0001c0001t0003g0336 a0001c0001t0004g0006 a0001c0001t0004g0060 others(189): Show |
198 | 428 | 0.4626 | -13 | c.*77 others(24): Show |
GALNT6 | ENSG00000139629.16 | transcript | ENST00000356317.8 | protein_coding | 4648 | chr12 | TogoVar | |||||||
GALNT8_chr12_4715400_4777726 | 4761300 | ACAGTACA others(6): Show |
A | intron_variant | MODIFIER | NA19082.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0223 | 1 | 338 | 0.0030 | -13 | c.135 others(30): Show |
GALNT8 | ENSG00000130035.9 | transcript | ENST00000252318.7 | protein_coding | 7/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
GALNT8_chr12_4715400_4777726 | 4764530 | ATTTTTTT others(6): Show |
A | intron_variant | MODIFIER | HG01346.hp2 HG03710.hp1 NA19075.hp2 |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0100 a0002c0002t0002g0149 a0002c0002t0002g0168 |
3 | 338 | 0.0089 | -13 | c.159 others(30): Show |
GALNT8 | ENSG00000130035.9 | transcript | ENST00000252318.7 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
GALNT9_chr12_132191372_132334589 | 132263862 | ACAGTGGT others(6): Show |
A | intron_variant | MODIFIER | HG02109.hp1 | a0001 | a0001c0019 | a0001c0019t0003 | a0001c0019t0003g0145 | 1 | 183 | 0.0055 | -13 | c.420 others(30): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 2/10 | chr12 | TogoVar | |||||||
GALNTL5_chr7_151951446_152024929 | 151981598 | CTTCCTTC others(6): Show |
C | intron_variant | MODIFIER | HG00738.hp1 HG00738.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0262 a0001c0001t0001g0367 |
2 | 384 | 0.0052 | -13 | c.369 others(30): Show |
GALNTL5 | ENSG00000106648.15 | transcript | ENST00000392800.7 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNTL5_chr7_151951446_152024929 | 151995347 | AATTTTTT others(6): Show |
A | intron_variant | MODIFIER | HG00423.hp1 HG01070.hp1 HG01433.hp1 others(22): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(3): Show | a0001c0001t0001g0005 a0001c0001t0002g0315 a0002c0002t0001g0033 others(22): Show |
25 | 384 | 0.0651 | -13 | c.659 others(30): Show |
GALNTL5 | ENSG00000106648.15 | transcript | ENST00000392800.7 | protein_coding | 5/8 | chr7 | TogoVar | |||||||
GALNTL5_chr7_151951446_152024929 | 151995348 | ATTTTTTT others(6): Show |
A | intron_variant | MODIFIER | HG02615.hp2 HG03139.hp2 |
a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0030 a0005c0005t0001g0346 |
2 | 384 | 0.0052 | -13 | c.659 others(30): Show |
GALNTL5 | ENSG00000106648.15 | transcript | ENST00000392800.7 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNTL6_chr4_171808404_173046559 | 172057716 | AAAAAAAA others(6): Show |
A | intron_variant | MODIFIER | HG03579.hp1 NA18522.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0018 a0001c0001t0004g0013 |
2 | 40 | 0.0500 | -13 | c.139 others(34): Show |
GALNTL6 | ENSG00000174473.17 | transcript | ENST00000506823.6 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
GALNTL6_chr4_171808404_173046559 | 172074469 | TCATCCAC others(6): Show |
T | intron_variant | MODIFIER | HG02630.hp1 HG02965.hp2 HG03139.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008 | a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0008g0010 |
3 | 40 | 0.0750 | -13 | c.139 others(34): Show |
GALNTL6 | ENSG00000174473.17 | transcript | ENST00000506823.6 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
GALNTL6_chr4_171808404_173046559 | 172831157 | CAAAAAAA others(6): Show |
C | intron_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0016 | 1 | 40 | 0.0250 | -13 | c.923 others(32): Show |
GALNTL6 | ENSG00000174473.17 | transcript | ENST00000506823.6 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
GALNTL6_chr4_171808404_173046559 | 173022212 | GAAGGAAG others(6): Show |
G | intron_variant | MODIFIER | HG01884.hp1 HG02145.hp2 HG02258.hp1 others(2): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0008a0001c0001t0011others(2): Show | a0001c0001t0001g0036 a0001c0001t0008g0010 a0001c0001t0011g0031 others(2): Show |
5 | 40 | 0.1250 | -13 | c.163 others(30): Show |
GALNTL6 | ENSG00000174473.17 | transcript | ENST00000506823.6 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
GALP_chr19_56171008_56190775 | 56180911 | CTTTCTTT others(6): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00597.hp2 HG01081.hp1 others(62): Show |
a0002 | a0002c0003 | a0002c0003t0001a0002c0003t0003a0002c0003t0004others(6): Show | a0002c0003t0001g0001 a0002c0003t0001g0004 a0002c0003t0001g0012 others(47): Show |
65 | 444 | 0.1464 | -13 | c.136 others(28): Show |
GALP | ENSG00000197487.9 | transcript | ENST00000357330.7 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
GALP_chr19_56171008_56190775 | 56183054 | CTTTGTGT others(6): Show |
C | intron_variant | MODIFIER | NA18961.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0139 | 1 | 444 | 0.0023 | -13 | c.218 others(26): Show |
GALP | ENSG00000197487.9 | transcript | ENST00000357330.7 | protein_coding | 4/5 | chr19 | TogoVar | |||||||
GALR1_chr18_77244848_77282900 | 77261608 | TTGTTACT others(6): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00741.hp1 HG01167.hp1 others(10): Show |
a0001a0006a0007others(1): Show | a0001c0001a0001c0002a0006c0010others(2): Show | a0001c0001t0097a0001c0001t0113a0001c0001t0114others(8): Show | a0001c0001t0097g0153 a0001c0001t0113g0063 a0001c0001t0114g0057 others(9): Show |
13 | 366 | 0.0355 | -13 | c.732 others(30): Show |
GALR1 | ENSG00000166573.6 | transcript | ENST00000299727.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
GALR3_chr22_37818382_37830485 | 37821384 | CTTTTTTT others(6): Show |
C | upstream_gene_variant | MODIFIER | HG03491.hp1 NA18961.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 402 | 0.0050 | -13 | c.-20 others(24): Show |
GALR3 | ENSG00000128310.3 | transcript | ENST00000249041.3 | protein_coding | 1997 | chr22 | TogoVar | |||||||
GALT_chr9_34641675_34656035 | 34644302 | TATATATA others(6): Show |
T | upstream_gene_variant | MODIFIER | HG00642.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 416 | 0.0024 | -13 | c.-24 others(24): Show |
GALT | ENSG00000213930.12 | transcript | ENST00000378842.8 | protein_coding | 2372 | chr9 | TogoVar | |||||||
GAL_chr11_68679544_68696175 | 68690401 | CGATGGGG others(6): Show |
C | intron_variant | MODIFIER | HG01167.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0039 | 1 | 394 | 0.0025 | -13 | c.302 others(28): Show |
GAL | ENSG00000069482.7 | transcript | ENST00000265643.4 | protein_coding | 5/5 | chr11 | TogoVar | |||||||
GANC_chr15_42268201_42358666 | 42295663 | CACACACA others(6): Show |
C | intron_variant | MODIFIER | NA18981.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0176 | 1 | 262 | 0.0038 | -13 | c.513 others(30): Show |
GANC | ENSG00000214013.10 | transcript | ENST00000318010.13 | protein_coding | 5/23 | chr15 | TogoVar | |||||||
GANC_chr15_42268201_42358666 | 42325632 | AGTTCTGT others(6): Show |
A | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp2 HG00738.hp1 others(18): Show |
a0003a0013 | a0003c0003a0013c0016 | a0003c0003t0005a0013c0016t0005 | a0003c0003t0005g0011 a0003c0003t0005g0107 a0003c0003t0005g0108 others(18): Show |
21 | 262 | 0.0802 | -13 | c.129 others(30): Show |
GANC | ENSG00000214013.10 | transcript | ENST00000318010.13 | protein_coding | 11/23 | chr15 | TogoVar | |||||||
GANC_chr15_42268201_42358666 | 42355197 | CTTTTTTT others(6): Show |
C | downstream_gene_variant | MODIFIER | HG00558.hp2 HG01123.hp2 HG02056.hp1 others(23): Show |
a0004a0006a0014 | a0004c0004a0006c0006a0014c0019 | a0004c0004t0003a0006c0006t0003a0014c0019t0003 | a0004c0004t0003g0017 a0004c0004t0003g0018 a0004c0004t0003g0021 others(23): Show |
26 | 262 | 0.0992 | -13 | c.*30 others(24): Show |
GANC | ENSG00000214013.10 | transcript | ENST00000318010.13 | protein_coding | 1532 | chr15 | TogoVar | |||||||
GAP43_chr3_115618510_115726483 | 115716716 | AAATATAT others(6): Show |
A | intron_variant | MODIFIER | HG01109.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0279 | 1 | 352 | 0.0028 | -13 | c.629 others(30): Show |
GAP43 | ENSG00000172020.13 | transcript | ENST00000305124.11 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
GAPVD1_chr9_125256826_125372207 | 125293851 | TTTATATA others(6): Show |
T | intron_variant | MODIFIER | HG01261.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0033 | 1 | 340 | 0.0029 | -13 | c.-14 others(32): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
GAPVD1_chr9_125256826_125372207 | 125293871 | TATATATA others(6): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(94): Show |
a0001a0006a0007 | a0001c0001a0001c0005a0001c0014others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(15): Show | a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0195 others(94): Show |
97 | 340 | 0.2853 | -13 | c.-14 others(32): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 2/27 | chr9 | TogoVar | |||||||
GAPVD1_chr9_125256826_125372207 | 125300037 | AAATATAT others(6): Show |
A | intron_variant | MODIFIER | HG02922.hp2 | a0001 | a0001c0003 | a0001c0003t0006 | a0001c0003t0006g0159 | 1 | 340 | 0.0029 | -13 | c.185 others(28): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 4/27 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
GAPVD1_chr9_125256826_125372207 | 125300039 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG02055.hp2 HG02056.hp2 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0001t0031a0001c0003t0026 | a0001c0001t0002g0027 a0001c0001t0002g0048 a0001c0001t0002g0080 others(3): Show |
6 | 340 | 0.0177 | -13 | c.185 others(28): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 4/27 | chr9 | TogoVar | |||||||
GAREM1_chr18_32258522_32475882 | 32324408 | CCACAGAG others(6): Show |
C | intron_variant | MODIFIER | HG02257.hp1 | a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0110 | 1 | 192 | 0.0052 | -13 | c.263 others(32): Show |
GAREM1 | ENSG00000141441.16 | transcript | ENST00000269209.7 | protein_coding | 2/5 | chr18 | TogoVar | |||||||
GAREM1_chr18_32258522_32475882 | 32364015 | TATATATA others(6): Show |
T | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0008 | a0001c0008t0035 | a0001c0008t0035g0064 | 1 | 192 | 0.0052 | -13 | c.262 others(32): Show |
GAREM1 | ENSG00000141441.16 | transcript | ENST00000269209.7 | protein_coding | 2/5 | chr18 | TogoVar | |||||||
GARIN1A_chr7_128667292_128692877 | 128691122 | ATATAGAT others(6): Show |
A | downstream_gene_variant | MODIFIER | NA19078.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0120 | 1 | 428 | 0.0023 | -13 | c.*79 others(24): Show |
GARIN1A | ENSG00000205085.13 | transcript | ENST00000682356.1 | protein_coding | 3246 | chr7 | TogoVar | |||||||
GARIN6_chr12_99642753_99655114 | 99652190 | AGGCTGGG others(6): Show |
A | downstream_gene_variant | MODIFIER | HG02723.hp2 HG02818.hp2 HG03453.hp1 |
a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0001 | 3 | 456 | 0.0066 | -13 | c.*27 others(24): Show |
GARIN6 | ENSG00000180219.2 | transcript | ENST00000324341.2 | protein_coding | 2077 | chr12 | TogoVar | |||||||
GARRE1_chr19_34249554_34360566 | 34290874 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG02717.hp1 HG02818.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0004a0001c0003t0006 | a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0001g0271 others(5): Show |
8 | 326 | 0.0245 | -13 | c.-79 others(32): Show |
GARRE1 | ENSG00000166398.14 | transcript | ENST00000299505.8 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
GARRE1_chr19_34249554_34360566 | 34320796 | ACTACAGC others(6): Show |
A | intron_variant | MODIFIER | NA18939.hp2 NA18988.hp1 NA19001.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0018 | a0001c0001t0001g0245 a0001c0001t0001g0267 a0001c0001t0001g0268 others(1): Show |
4 | 326 | 0.0123 | -13 | c.705 others(28): Show |
GARRE1 | ENSG00000166398.14 | transcript | ENST00000299505.8 | protein_coding | 3/13 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
GARRE1_chr19_34249554_34360566 | 34321223 | ATTTTTTT others(6): Show |
A | intron_variant | MODIFIER | HG01884.hp1 HG02451.hp1 HG02559.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0090 a0001c0001t0001g0115 a0001c0001t0001g0118 others(2): Show |
5 | 326 | 0.0153 | -13 | c.705 others(30): Show |
GARRE1 | ENSG00000166398.14 | transcript | ENST00000299505.8 | protein_coding | 3/13 | INFO_REALIGN_3_PRIME | chr19 | TogoVar |