Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LDB2_chr4_16496541_16903645	16581991	GGGAAGGA others(6): Show GGGAAGGAAGGGAA	G G	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp2 HG01192.hp2 others(11): Show HG01081.hp1 HG01081.hp2 HG01192.hp2 HG01515.hp2 HG01517.hp2 HG02055.hp1 HG02083.hp2 HG02698.hp1 HG03471.hp1 HG03579.hp2 HG03834.hp1 NA19057.hp2 NA19070.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010	a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0050 others(11): Show a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0050 a0001c0001t0001g0082 a0001c0001t0001g0086 a0001c0001t0001g0101 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0123 a0001c0001t0001g0150 a0001c0001t0002g0100 a0001c0001t0003g0091 a0001c0001t0003g0127 a0001c0001t0010g0162	14	162	0.0864	-13	c.615 others(30): Show c.615+3918_615+3930delTTCCCTTCCTTCC		LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	5/7						chr4	TogoVar
LDB2_chr4_16496541_16903645	16586506	ACACACAC others(6): Show ACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp2 HG00438.hp1 others(34): Show HG00140.hp1 HG00423.hp2 HG00438.hp1 HG00609.hp2 HG00735.hp2 HG01123.hp2 HG01243.hp1 HG01255.hp2 HG01258.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG02129.hp2 HG02132.hp1 HG02293.hp1 HG02300.hp2 HG02647.hp1 HG02818.hp2 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03453.hp2 HG03516.hp1 HG03540.hp2 HG04204.hp2 HG06807.hp1 NA18986.hp1 NA18993.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19057.hp1 NA19079.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0008 a0001c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0034 others(34): Show a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0084 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0124 a0001c0001t0001g0128 a0001c0001t0001g0134 a0001c0001t0001g0143 a0001c0001t0001g0147 a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0002g0019 a0001c0001t0002g0065 a0001c0001t0002g0079 a0001c0001t0002g0087 a0001c0001t0002g0093 a0001c0001t0002g0121 a0001c0001t0003g0039 a0001c0001t0003g0133 a0001c0001t0003g0136 a0001c0001t0003g0138 a0001c0001t0003g0157 a0001c0002t0001g0001 a0001c0002t0001g0030 a0001c0002t0008g0035 a0001c0005t0001g0021	37	162	0.2284	-13	c.532 others(28): Show c.532-514_532-502delGTGTGTGTGTGTG		LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	4/7						chr4	TogoVar
LDB2_chr4_16496541_16903645	16885154	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA20300.hp2 HG02451.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0125 a0001c0001t0001g0126	2	162	0.0124	-13	c.132 others(32): Show c.132+13187_132+13199delTTTTTTTTTTTTT		LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7						chr4	TogoVar
LDB3_chr10_86663511_86705050	86668453	TCCATTTA others(6): Show TCCATTTATGGGCG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19075.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	412	0.0024	-13	c.-14 others(22): Show c.-140_-128delCCATTTATGGGCG		LDB3	ENSG00000122367.21	transcript	ENST00000263066.11	protein_coding					57		chr10	TogoVar
LDHAL6A_chr11_18450856_18484601	18462642	ACAAACAA others(6): Show ACAAACAAACAAAC	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03041.hp1 HG03209.hp1 others(8): Show HG02717.hp2 HG03041.hp1 HG03209.hp1 HG03540.hp2 HG03834.hp2 HG03942.hp1 NA18962.hp2 NA19070.hp2 NA19079.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0019 a0001c0001t0032 others(5): Show a0001c0001t0006 a0001c0001t0019 a0001c0001t0032 a0001c0001t0042 a0001c0001t0043 a0001c0001t0070 a0001c0002t0006 a0001c0002t0027	a0001c0001t0006g0291 a0001c0001t0019g0319 a0001c0001t0032g0318 others(8): Show a0001c0001t0006g0291 a0001c0001t0019g0319 a0001c0001t0032g0318 a0001c0001t0042g0317 a0001c0001t0043g0310 a0001c0001t0070g0311 a0001c0002t0006g0290 a0001c0002t0006g0292 a0001c0002t0006g0293 a0001c0002t0006g0309 a0001c0002t0027g0294	11	420	0.0262	-13	c.127 others(30): Show c.127-1318_127-1306delCAAACAAACAAAC		LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	1/6						chr11	TogoVar
LDHAL6B_chr15_59201843_59213588	59208293	ACCTCTGA others(6): Show ACCTCTGATGTAGC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0009 a0002c0001t0009	a0002c0001t0009g0000 a0002c0001t0009g0000	1	448	0.0022	-13	c.20 others(22): Show c.208_*220delCCTCTGATGTAGC		LDHAL6B	ENSG00000171989.6	transcript	ENST00000307144.6	protein_coding	1/1				208		chr15	TogoVar
LDHAL6B_chr15_59201843_59213588	59209815	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp1 HG04199.hp1 HG01433.hp1 HG04199.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0000 a0001c0002t0001g0000	2	448	0.0045	-13	c.17 others(24): Show c.1730_*1742delTTTTTTTTTTTTT		LDHAL6B	ENSG00000171989.6	transcript	ENST00000307144.6	protein_coding					1228		chr15	TogoVar
LDHA_chr11_18389563_18413425	18406414	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG04184.hp1 HG00323.hp1 HG04184.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0052 a0001c0003t0004g0052	2	390	0.0051	-13	c.835 others(28): Show c.835-694_835-682delAAAAAAAAAAAAA		LDHA	ENSG00000134333.15	transcript	ENST00000422447.8	protein_coding	7/7					INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHA_chr11_18389563_18413425	18411223	GGCACGGT others(6): Show GGCACGGTGGCTCA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02486.hp1 HG02559.hp1 others(3): Show HG02257.hp1 HG02486.hp1 HG02559.hp1 HG02895.hp1 HG02897.hp2 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0018 a0001c0002t0003g0108 a0001c0002t0003g0110 others(1): Show a0001c0002t0003g0018 a0001c0002t0003g0108 a0001c0002t0003g0110 a0001c0002t0003g0111	6	390	0.0154	-13	c.39 others(24): Show c.3943_*3955delGCACGGTGGCTCA		LDHA	ENSG00000134333.15	transcript	ENST00000422447.8	protein_coding					2799		chr11	TogoVar
LDHC_chr11_18407318_18457063	18411223	GGCACGGT others(6): Show GGCACGGTGGCTCA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02257.hp1 HG02486.hp2 HG02559.hp2 others(3): Show HG02257.hp1 HG02486.hp2 HG02559.hp2 HG02895.hp2 HG02897.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0022 a0001c0001t0002g0040 a0001c0001t0002g0041 others(3): Show a0001c0001t0002g0022 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044	6	348	0.0172	-13	c.-11 others(24): Show c.-1194_-1182delGCACGGTGGCTCA		LDHC	ENSG00000166796.12	transcript	ENST00000541669.6	protein_coding					1094		chr11	TogoVar
LDHC_chr11_18407318_18457063	18449428	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02523.hp2 NA18978.hp2 HG02523.hp2 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0250 a0001c0001t0001g0254 a0001c0001t0001g0250 a0001c0001t0001g0254	2	348	0.0058	-13	c.835 others(30): Show c.835-1514_835-1502delAAAAAAAAAAAAA		LDHC	ENSG00000166796.12	transcript	ENST00000541669.6	protein_coding	7/7					INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	35948997	AGCATCAT others(6): Show AGCATCATTACTGT	A A	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01070.hp2 HG01071.hp2 others(52): Show HG00597.hp1 HG01070.hp2 HG01071.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG02109.hp1 HG02145.hp1 HG02155.hp2 HG02257.hp1 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02622.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03516.hp1 HG03540.hp2 HG03688.hp1 HG04199.hp2 NA18522.hp1 NA18522.hp2 NA18965.hp1 NA18970.hp2 NA18979.hp1 NA19012.hp1 NA19056.hp2 NA19079.hp1 NA19079.hp2 NA19087.hp2 NA21309.hp1 NA21309.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0002 a0003c0005 others(2): Show a0001c0001 a0001c0002 a0003c0005 a0003c0011 a0005c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0025 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0007 a0001c0002t0008 a0001c0002t0009 a0001c0002t0014 a0003c0005t0004 a0003c0011t0004 a0005c0010t0001	a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0024 others(52): Show a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0047 a0001c0001t0001g0085 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0154 a0001c0001t0001g0161 a0001c0001t0001g0210 a0001c0001t0001g0222 a0001c0001t0002g0033 a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0004g0162 a0001c0001t0005g0092 a0001c0001t0005g0094 a0001c0001t0005g0200 a0001c0001t0005g0205 a0001c0001t0006g0203 a0001c0001t0006g0221 a0001c0001t0007g0018 a0001c0001t0008g0095 a0001c0001t0008g0199 a0001c0001t0009g0007 a0001c0001t0009g0042 a0001c0001t0009g0043 a0001c0001t0011g0036 a0001c0001t0012g0008 a0001c0001t0015g0204 a0001c0001t0016g0034 a0001c0001t0025g0201 a0001c0002t0001g0021 a0001c0002t0001g0163 a0001c0002t0001g0196 a0001c0002t0001g0202 a0001c0002t0001g0212 a0001c0002t0002g0002 a0001c0002t0004g0013 a0001c0002t0004g0015 a0001c0002t0004g0019 a0001c0002t0004g0197 a0001c0002t0004g0219 a0001c0002t0007g0084 a0001c0002t0008g0038 a0001c0002t0008g0039 a0001c0002t0009g0206 a0001c0002t0014g0220 a0003c0005t0004g0009 a0003c0005t0004g0093 a0003c0011t0004g0198 a0005c0010t0001g0041	55	236	0.2331	-13	c.46+ others(28): Show c.46+4898_46+4910delATTACTGTGCATC		LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD4_chr18_13213760_13657751	13271893	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0066 a0001c0001t0003g0066	1	178	0.0056	-13	c.-46 others(32): Show c.-466-6200_-466-6188delTTTTTTTTTTTTT		LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13321861	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA18949.hp2 HG00558.hp1 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0066 a0001c0001t0001 a0001c0001t0066	a0001c0001t0001g0026 a0001c0001t0066g0115 a0001c0001t0001g0026 a0001c0001t0066g0115	2	178	0.0112	-13	c.-38 others(34): Show c.-383+43702_-383+43714delAAAAAAAAAAAAA		LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13344486	CTTTGTAG others(6): Show CTTTGTAGTATAGT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp2 HG01261.hp2 others(7): Show HG00099.hp2 HG00408.hp2 HG01261.hp2 HG01884.hp2 HG02486.hp2 HG02602.hp2 HG02683.hp1 HG03704.hp1 HG03831.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0023 a0001c0001t0026 a0001c0001t0038 a0001c0001t0056	a0001c0001t0001g0116 a0001c0001t0001g0124 a0001c0001t0003g0064 others(7): Show a0001c0001t0001g0116 a0001c0001t0001g0124 a0001c0001t0003g0064 a0001c0001t0003g0137 a0001c0001t0004g0153 a0001c0001t0005g0177 a0001c0001t0023g0093 a0001c0001t0026g0162 a0001c0001t0038g0012 a0001c0001t0056g0059	10	178	0.0562	-13	c.-38 others(34): Show c.-382-42852_-382-42840delTGTAGTATAGTTT		LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13610293	TTTTTTTT others(6): Show TTTTTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG02886.hp1 NA18906.hp2 NA18990.hp1 HG02886.hp1 NA18906.hp2 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0019 a0001c0001t0053 a0001c0001t0003 a0001c0001t0019 a0001c0001t0053	a0001c0001t0003g0045 a0001c0001t0019g0072 a0001c0001t0053g0083 a0001c0001t0003g0045 a0001c0001t0019g0072 a0001c0001t0053g0083	3	178	0.0169	-13	c.182 others(32): Show c.182-10823_182-10811delTTTTTTTTTTTTG		LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	4/6						chr18	TogoVar
LDLR_chr19_11084463_11138820	11108220	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19000.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0071 a0001c0001t0012g0071	1	358	0.0028	-13	c.940 others(28): Show c.940+716_940+728delAAAAAAAAAAAAA		LDLR	ENSG00000130164.15	transcript	ENST00000558518.6	protein_coding	6/17					INFO_REALIGN_3_PRIME	chr19	TogoVar
LEF1_chr4_108042548_108173932	108064682	CACACACA others(6): Show CACACACACACAAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(75): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00544.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00735.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01515.hp1 HG01516.hp1 HG01934.hp2 HG02004.hp1 HG02055.hp1 HG02083.hp1 HG02135.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02622.hp2 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp1 HG02809.hp1 HG02970.hp1 HG03239.hp1 HG03453.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03831.hp2 HG03927.hp1 HG04199.hp2 HG04204.hp1 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18954.hp2 NA18960.hp2 NA18962.hp1 NA18970.hp1 NA18971.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA19010.hp2 NA19056.hp2 NA19066.hp2 NA19076.hp2 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19090.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0002c0003 a0001c0001 a0001c0007 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0007t0002 a0002c0003t0002	a0001c0001t0001g0127 a0001c0001t0001g0152 a0001c0001t0001g0161 others(75): Show a0001c0001t0001g0127 a0001c0001t0001g0152 a0001c0001t0001g0161 a0001c0001t0001g0187 a0001c0001t0001g0201 a0001c0001t0002g0010 a0001c0001t0002g0014 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0032 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0071 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0004g0011 a0001c0001t0004g0016 a0001c0001t0004g0028 a0001c0001t0004g0030 a0001c0001t0004g0031 a0001c0001t0004g0055 a0001c0001t0004g0056 a0001c0001t0004g0091 a0001c0001t0008g0006 a0001c0001t0008g0007 a0001c0001t0008g0008 a0001c0001t0008g0009 a0001c0001t0009g0012 a0001c0001t0009g0013 a0001c0001t0009g0015 a0001c0001t0009g0040 a0001c0001t0013g0110 a0001c0001t0017g0035 a0001c0001t0018g0019 a0001c0001t0020g0097 a0001c0007t0002g0025 a0002c0003t0002g0072 a0002c0003t0002g0073 a0002c0003t0002g0074	78	264	0.2955	-13	c.111 others(30): Show c.1117-311_1117-299delATTGTGTGTGTGT		LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	9/11						chr4	TogoVar
LEKR1_chr3_156821353_157051129	156875992	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0182 a0001c0003t0001g0182	1	244	0.0041	-13	c.263 others(32): Show c.263+23022_263+23034delAAAAAAAAAAAAA		LEKR1	ENSG00000197980.14	transcript	ENST00000356539.9	protein_coding	3/12					INFO_REALIGN_3_PRIME	chr3	TogoVar
LEKR1_chr3_156821353_157051129	156928349	AGGGTGTC others(6): Show AGGGTGTCCCTAGT	A A	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0076 a0001c0004t0001g0076	1	244	0.0041	-13	c.559 others(28): Show c.559+749_559+761delTGTCCCTAGTGGG		LEKR1	ENSG00000197980.14	transcript	ENST00000356539.9	protein_coding	5/12					INFO_REALIGN_3_PRIME	chr3	TogoVar
LEMD3_chr12_65164583_65253355	65167942	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0196 a0001c0003t0003g0196	1	398	0.0025	-13	c.-16 others(24): Show c.-1654_-1642delTTTTTTTTTTTTT		LEMD3	ENSG00000174106.3	transcript	ENST00000308330.3	protein_coding					1640		chr12	TogoVar
LEMD3_chr12_65164583_65253355	65198054	ATGATGTG others(6): Show ATGATGTGCACATT	A A	intron_variant intron_variant	MODIFIER	NA18942.hp1 NA18942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	398	0.0025	-13	c.152 others(34): Show c.1523-12869_1523-12857delATGTGCACATTTG		LEMD3	ENSG00000174106.3	transcript	ENST00000308330.3	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr12	TogoVar
LENG8_chr19_54444199_54467016	54444671	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp2 HG01123.hp1 HG01123.hp2 others(55): Show HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01255.hp2 HG01261.hp2 HG01884.hp1 HG01891.hp2 HG01952.hp2 HG02027.hp1 HG02055.hp2 HG02083.hp1 HG02145.hp2 HG02257.hp1 HG02486.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03195.hp2 HG03225.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18967.hp2 NA18981.hp1 NA18981.hp2 NA18991.hp1 NA18993.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19068.hp1 NA19083.hp2 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0005 others(4): Show a0001c0001 a0001c0002 a0001c0005 a0001c0008 a0001c0020 a0002c0003 a0003c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0016 a0001c0002t0001 a0001c0002t0002 a0001c0005t0006 a0001c0008t0001 a0001c0020t0001 a0002c0003t0001 a0003c0004t0005	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(37): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0092 a0001c0001t0001g0114 a0001c0001t0003g0011 a0001c0001t0007g0083 a0001c0001t0016g0043 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0051 a0001c0002t0001g0154 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0160 a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0002g0001 a0001c0002t0002g0014 a0001c0002t0002g0096 a0001c0005t0006g0026 a0001c0005t0006g0107 a0001c0008t0001g0111 a0001c0008t0001g0112 a0001c0020t0001g0095 a0002c0003t0001g0008 a0002c0003t0001g0117 a0003c0004t0005g0094 a0003c0004t0005g0098	58	431	0.1346	-13	c.-46 others(24): Show c.-4694_-4682delAAAAAAAAAAAAA		LENG8	ENSG00000167615.18	transcript	ENST00000326764.10	protein_coding					4527		chr19	TogoVar
LEP_chr7_128236278_128262629	128258721	CTTTCTTT others(6): Show CTTTCTTTCTTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04115.hp2 NA18947.hp2 NA19062.hp1 HG04115.hp2 NA18947.hp2 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0005 a0001c0001t0003 a0001c0002t0005	a0001c0001t0003g0115 a0001c0002t0005g0006 a0001c0002t0005g0050 a0001c0001t0003g0115 a0001c0002t0005g0006 a0001c0002t0005g0050	3	395	0.0076	-13	c.39 others(24): Show c.3959_*3971delTTTCTTTCTTTCT		LEP	ENSG00000174697.5	transcript	ENST00000308868.5	protein_coding					1093		chr7	TogoVar
LETM1_chr4_1806479_1861156	1812658	TGAGGGAG others(6): Show TGAGGGAGAATGAC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02559.hp1 HG02809.hp2 HG03139.hp2 others(1): Show HG02559.hp1 HG02809.hp2 HG03139.hp2 NA18522.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0002 a0001c0013 a0002c0003 others(1): Show a0001c0002 a0001c0013 a0002c0003 a0006c0006	a0001c0002t0016 a0001c0013t0015 a0002c0003t0021 others(1): Show a0001c0002t0016 a0001c0013t0015 a0002c0003t0021 a0006c0006t0025	a0001c0002t0016g0009 a0001c0013t0015g0011 a0002c0003t0021g0020 others(1): Show a0001c0002t0016g0009 a0001c0013t0015g0011 a0002c0003t0021g0020 a0006c0006t0025g0025	4	200	0.0200	-13	c.17 others(24): Show c.1753_*1765delGTCATTCTCCCTC		LETM1	ENSG00000168924.15	transcript	ENST00000302787.3	protein_coding	14/14				1753		chr4	TogoVar
LETMD1_chr12_51043327_51065424	51044945	TAGAAGTG others(6): Show TAGAAGTGGGGACC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19078.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0007 a0001c0001t0002g0007	1	416	0.0024	-13	c.-34 others(24): Show c.-3411_-3399delAGAAGTGGGGACC		LETMD1	ENSG00000050426.16	transcript	ENST00000262055.9	protein_coding					3381		chr12	TogoVar
LEXM_chr1_54801063_54847252	54844959	GTTTTTTT others(6): Show GTTTTTTTTTTTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 NA20129.hp2 HG01167.hp1 NA20129.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0005c0007 a0001c0002 a0005c0007	a0001c0002t0001 a0005c0007t0002 a0001c0002t0001 a0005c0007t0002	a0001c0002t0001g0078 a0005c0007t0002g0063 a0001c0002t0001g0078 a0005c0007t0002g0063	2	382	0.0052	-13	c.30 others(24): Show c.3087_*3099delTTTTTTTTTTTGT		LEXM	ENSG00000162398.12	transcript	ENST00000371273.4	protein_coding					2708		chr1	TogoVar
LGALS12_chr11_63501084_63521772	63507725	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	434	0.0023	-13	c.70- others(26): Show c.70-813_70-801delTTTTTTTTTTTTT		LGALS12	ENSG00000133317.16	transcript	ENST00000394618.9	protein_coding	1/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
LGALS9B_chr17_20444395_20472539	20467352	CCCAGGAG others(6): Show CCCAGGAGTTGCTT	C C	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0233 a0001c0001t0001g0233	1	433	0.0023	-13	c.39+ others(24): Show c.39+67_39+79delAAGCAACTCCTGG		LGALS9B	ENSG00000170298.16	transcript	ENST00000423676.8	protein_coding	1/10						chr17	TogoVar
LGR4_chr11_27360961_27477790	27364456	ATCGAAAC others(6): Show ATCGAAACGCACTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00408.hp2 HG00544.hp1 others(78): Show HG00099.hp2 HG00408.hp2 HG00544.hp1 HG00639.hp1 HG00738.hp1 HG00738.hp2 HG01070.hp1 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp2 HG01891.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp2 HG02027.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02135.hp1 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02486.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG03017.hp1 HG03139.hp1 HG03225.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03834.hp2 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18944.hp2 NA18946.hp2 NA18959.hp1 NA18960.hp1 NA18964.hp1 NA18964.hp2 NA18966.hp2 NA18967.hp2 NA18975.hp1 NA18978.hp1 NA18982.hp2 NA18984.hp1 NA18985.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp2 NA18993.hp2 NA18994.hp1 NA19004.hp1 NA19009.hp2 NA19030.hp1 NA19054.hp1 NA19057.hp1 NA19062.hp1 NA19068.hp2 NA19075.hp1 NA19081.hp1 NA19082.hp2 NA19240.hp2 NA20752.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0002 a0001c0014 a0004c0009 others(1): Show a0001c0002 a0001c0014 a0004c0009 a0007c0013	a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 others(13): Show a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0011 a0001c0002t0017 a0001c0002t0018 a0001c0002t0020 a0001c0002t0022 a0001c0002t0023 a0001c0002t0026 a0001c0002t0033 a0001c0002t0037 a0001c0014t0005 a0004c0009t0005 a0007c0013t0004	a0001c0002t0004g0061 a0001c0002t0004g0062 a0001c0002t0004g0066 others(77): Show a0001c0002t0004g0061 a0001c0002t0004g0062 a0001c0002t0004g0066 a0001c0002t0004g0067 a0001c0002t0004g0070 a0001c0002t0004g0071 a0001c0002t0004g0073 a0001c0002t0004g0074 a0001c0002t0004g0076 a0001c0002t0004g0080 a0001c0002t0004g0086 a0001c0002t0004g0087 a0001c0002t0004g0088 a0001c0002t0004g0107 a0001c0002t0004g0113 a0001c0002t0004g0121 a0001c0002t0004g0123 a0001c0002t0004g0124 a0001c0002t0004g0133 a0001c0002t0004g0135 a0001c0002t0004g0136 a0001c0002t0004g0141 a0001c0002t0004g0151 a0001c0002t0005g0001 a0001c0002t0005g0007 a0001c0002t0005g0008 a0001c0002t0005g0010 a0001c0002t0005g0011 a0001c0002t0005g0012 a0001c0002t0005g0022 a0001c0002t0005g0023 a0001c0002t0005g0024 a0001c0002t0005g0025 a0001c0002t0005g0026 a0001c0002t0005g0033 a0001c0002t0005g0034 a0001c0002t0005g0044 a0001c0002t0005g0049 a0001c0002t0005g0050 a0001c0002t0006g0186 a0001c0002t0006g0187 a0001c0002t0006g0197 a0001c0002t0006g0199 a0001c0002t0006g0200 a0001c0002t0006g0219 a0001c0002t0006g0225 a0001c0002t0006g0233 a0001c0002t0006g0238 a0001c0002t0008g0170 a0001c0002t0008g0189 a0001c0002t0008g0190 a0001c0002t0008g0191 a0001c0002t0008g0192 a0001c0002t0008g0194 a0001c0002t0008g0195 a0001c0002t0008g0196 a0001c0002t0008g0203 a0001c0002t0008g0204 a0001c0002t0008g0228 a0001c0002t0008g0237 a0001c0002t0011g0077 a0001c0002t0011g0079 a0001c0002t0011g0091 a0001c0002t0011g0144 a0001c0002t0011g0158 a0001c0002t0011g0163 a0001c0002t0017g0005 a0001c0002t0017g0006 a0001c0002t0018g0239 a0001c0002t0018g0240 a0001c0002t0020g0004 a0001c0002t0022g0054 a0001c0002t0023g0056 a0001c0002t0026g0120 a0001c0002t0033g0171 a0001c0002t0037g0242 a0001c0014t0005g0027 a0004c0009t0005g0017 a0004c0009t0005g0057 a0007c0013t0004g0063	81	244	0.3320	-13	c.33 others(24): Show c.3398_*3410delCAGTGCGTTTCGA		LGR4	ENSG00000205213.14	transcript	ENST00000379214.9	protein_coding					1504		chr11	TogoVar
LGR6_chr1_202188799_202324761	202198667	GGTTTTTT others(6): Show GGTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG01993.hp2 HG03017.hp2 HG01517.hp2 HG01993.hp2 HG03017.hp2	a0002 a0015 a0002 a0015	a0002c0002 a0015c0021 a0002c0002 a0015c0021	a0002c0002t0002 a0015c0021t0002 a0002c0002t0002 a0015c0021t0002	a0002c0002t0002g0180 a0002c0002t0002g0225 a0015c0021t0002g0179 a0002c0002t0002g0180 a0002c0002t0002g0225 a0015c0021t0002g0179	3	262	0.0115	-13	c.212 others(30): Show c.212+4467_212+4479delGTTTTTTTTTTTT		LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	1/17						chr1	TogoVar
LGR6_chr1_202188799_202324761	202253620	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03139.hp1 HG03486.hp1 HG02970.hp2 HG03139.hp1 HG03486.hp1	a0002 a0002	a0002c0002 a0002c0006 a0002c0002 a0002c0006	a0002c0002t0003 a0002c0006t0003 a0002c0002t0003 a0002c0006t0003	a0002c0002t0003g0089 a0002c0006t0003g0083 a0002c0006t0003g0092 a0002c0002t0003g0089 a0002c0006t0003g0083 a0002c0006t0003g0092	3	262	0.0115	-13	c.428 others(32): Show c.428+17641_428+17653delTTTTTTTTTTTTT		LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	4/17					INFO_REALIGN_3_PRIME	chr1	TogoVar
LGSN_chr6_63270951_63324983	63313873	TACATACA others(6): Show TACATACATACATA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0040 a0002c0002t0040	a0002c0002t0040g0230 a0002c0002t0040g0230	1	312	0.0032	-13	c.30+ others(28): Show c.30+6028_30+6040delTATGTATGTATGT		LGSN	ENSG00000146166.17	transcript	ENST00000370657.9	protein_coding	1/3						chr6	TogoVar
LHFPL2_chr5_78480230_78653772	78652761	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18953.hp2 NA18953.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0178 a0001c0001t0001g0178	1	254	0.0039	-13	c.-46 others(24): Show c.-4625_-4613delAAAAAAAAAAAAA		LHFPL2	ENSG00000145685.14	transcript	ENST00000380345.7	protein_coding					3990		chr5	TogoVar
LHFPL3_chr7_104323603_104913561	104357021	GTCCCCAA others(6): Show GTCCCCAAATTACT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00558.hp1 others(35): Show HG00099.hp1 HG00323.hp2 HG00558.hp1 HG00558.hp2 HG00639.hp2 HG00733.hp1 HG01070.hp1 HG01074.hp1 HG01192.hp2 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG02056.hp1 HG02074.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02809.hp2 HG02897.hp2 HG02965.hp2 HG03017.hp2 HG03209.hp2 HG03239.hp2 HG03516.hp1 NA18612.hp1 NA18947.hp1 NA18994.hp2 NA19030.hp1 NA19063.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0002t0005	a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0047 others(35): Show a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0052 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0002g0001 a0001c0001t0002g0026 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0056 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0080 a0001c0001t0003g0025 a0001c0001t0003g0029 a0001c0001t0003g0044 a0001c0001t0003g0046 a0001c0001t0003g0053 a0001c0001t0003g0055 a0001c0001t0003g0058 a0001c0001t0003g0062 a0001c0001t0004g0027 a0001c0001t0004g0028 a0001c0001t0004g0030 a0001c0001t0004g0045 a0001c0001t0004g0054 a0001c0001t0004g0082 a0001c0001t0007g0004 a0001c0001t0009g0002 a0001c0001t0010g0015 a0001c0001t0011g0057 a0001c0001t0011g0063 a0001c0001t0013g0049 a0001c0002t0005g0085	38	86	0.4419	-13	c.445 others(32): Show c.445+27798_445+27810delTCCCCAAATTACT		LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2						chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104400104	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0043	1	86	0.0116	-13	c.445 others(32): Show c.445+70911_445+70923delAAAAAAAAAAAAA		LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2					INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104598909	TGGACTAG others(6): Show TGGACTAGACAACA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03516.hp1 HG02257.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0011 a0001c0001t0004 a0001c0001t0011	a0001c0001t0004g0083 a0001c0001t0011g0063 a0001c0001t0004g0083 a0001c0001t0011g0063	2	86	0.0233	-13	c.446 others(34): Show c.446-137763_446-137751delACTAGACAACAGG		LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2					INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL4_chr3_9493361_9558822	9516186	TTTTTTAG others(6): Show TTTTTTAGCCTATA	T T	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0333 a0001c0001t0009g0333	1	360	0.0028	-13	c.407 others(30): Show c.407-9996_407-9984delTATAGGCTAAAAA		LHFPL4	ENSG00000156959.9	transcript	ENST00000287585.8	protein_coding	2/3						chr3	TogoVar
LHFPL4_chr3_9493361_9558822	9548668	TGCCCATG others(6): Show TGCCCATGCTACCC	T T	intron_variant intron_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0089 a0001c0001t0003g0089	1	360	0.0028	-13	c.406 others(30): Show c.406+3593_406+3605delGGGTAGCATGGGC		LHFPL4	ENSG00000156959.9	transcript	ENST00000287585.8	protein_coding	2/3						chr3	TogoVar
LHFPL5_chr6_35800352_35829070	35803254	GCAAAACT others(6): Show GCAAAACTCTGTCT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0341 a0001c0001t0001g0341	1	386	0.0026	-13	c.-24 others(24): Show c.-2416_-2404delCAAAACTCTGTCT		LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding					2097		chr6	TogoVar
LHFPL5_chr6_35800352_35829070	35818338	TATATATA others(6): Show TATATATATATGTA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01070.hp1 HG01071.hp1 others(8): Show HG00280.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG02135.hp1 HG03669.hp2 HG03704.hp1 HG04204.hp1 NA18960.hp2 NA18965.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0012 a0001c0001t0004 a0001c0001t0009 a0001c0001t0012	a0001c0001t0004g0005 a0001c0001t0004g0006 a0001c0001t0004g0038 others(6): Show a0001c0001t0004g0005 a0001c0001t0004g0006 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0040 a0001c0001t0004g0046 a0001c0001t0009g0212 a0001c0001t0009g0219 a0001c0001t0012g0220	11	386	0.0285	-13	c.650 others(30): Show c.650-1098_650-1086delATATATATATGTA		LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding	2/3						chr6	TogoVar
LHFPL5_chr6_35800352_35829070	35818339	ATATATAT others(6): Show ATATATATATGTAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00544.hp2 HG00735.hp2 others(28): Show HG00280.hp2 HG00544.hp2 HG00735.hp2 HG00741.hp2 HG01074.hp1 HG01192.hp2 HG01515.hp2 HG01517.hp2 HG01934.hp1 HG01975.hp1 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02071.hp1 HG02683.hp2 HG02896.hp1 HG02922.hp1 HG03017.hp1 HG03490.hp2 HG03688.hp1 HG03834.hp2 NA18612.hp2 NA18943.hp2 NA18973.hp1 NA18978.hp2 NA19062.hp2 NA19064.hp2 NA19067.hp1 NA19088.hp1 NA19090.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 others(8): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0013 a0001c0001t0017 a0001c0001t0026 a0001c0001t0045 a0001c0001t0047 a0001c0001t0049 a0001c0001t0050 a0001c0001t0081	a0001c0001t0003g0198 a0001c0001t0003g0229 a0001c0001t0003g0232 others(28): Show a0001c0001t0003g0198 a0001c0001t0003g0229 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0238 a0001c0001t0003g0245 a0001c0001t0003g0254 a0001c0001t0003g0256 a0001c0001t0003g0268 a0001c0001t0003g0276 a0001c0001t0003g0278 a0001c0001t0003g0279 a0001c0001t0003g0280 a0001c0001t0003g0282 a0001c0001t0003g0286 a0001c0001t0004g0004 a0001c0001t0004g0037 a0001c0001t0010g0235 a0001c0001t0010g0364 a0001c0001t0013g0281 a0001c0001t0017g0253 a0001c0001t0017g0267 a0001c0001t0026g0244 a0001c0001t0026g0257 a0001c0001t0045g0266 a0001c0001t0047g0246 a0001c0001t0049g0243 a0001c0001t0050g0263 a0001c0001t0081g0004	31	386	0.0803	-13	c.650 others(30): Show c.650-1096_650-1084delATATATATGTATT		LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding	2/3					INFO_REALIGN_3_PRIME	chr6	TogoVar
LHFPL5_chr6_35800352_35829070	35818341	ATATATAT others(6): Show ATATATATGTATTT	A A	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02300.hp1 NA18942.hp2 others(4): Show HG01358.hp2 HG02300.hp1 NA18942.hp2 NA18974.hp2 NA19000.hp2 NA19063.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0055 a0001c0001t0003 a0001c0001t0055	a0001c0001t0003g0231 a0001c0001t0003g0239 a0001c0001t0003g0255 others(4): Show a0001c0001t0003g0231 a0001c0001t0003g0239 a0001c0001t0003g0255 a0001c0001t0003g0273 a0001c0001t0003g0284 a0001c0001t0003g0285 a0001c0001t0055g0265	7	386	0.0181	-13	c.650 others(30): Show c.650-1094_650-1082delATATATGTATTTT		LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding	2/3					INFO_REALIGN_3_PRIME	chr6	TogoVar
LHFPL5_chr6_35800352_35829070	35825121	TGGTCCAT others(6): Show TGGTCCATGGCAGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18991.hp2 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0177	1	386	0.0026	-13	c.21 others(24): Show c.2157_*2169delGGTCCATGGCAGC		LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding					1052		chr6	TogoVar
LHX6_chr9_122197582_122233957	122212733	CCTGCCAC others(6): Show CCTGCCACGGACAT	C C	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0184	1	438	0.0023	-13	c.105 others(30): Show c.1054+860_1054+872delATGTCCGTGGCAG		LHX6	ENSG00000106852.16	transcript	ENST00000394319.9	protein_coding	8/9						chr9	TogoVar
LIAS_chr4_39454056_39484506	39471517	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01074.hp1 HG01884.hp2 others(13): Show HG00280.hp2 HG01074.hp1 HG01884.hp2 HG01891.hp1 HG01993.hp1 HG02055.hp1 HG02615.hp2 HG02895.hp1 HG02976.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03453.hp1 NA19030.hp1 NA19240.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0009 a0001c0001t0019 a0001c0001t0006 a0001c0001t0009 a0001c0001t0019	a0001c0001t0006g0025 a0001c0001t0006g0026 a0001c0001t0006g0220 others(9): Show a0001c0001t0006g0025 a0001c0001t0006g0026 a0001c0001t0006g0220 a0001c0001t0006g0221 a0001c0001t0006g0222 a0001c0001t0006g0223 a0001c0001t0006g0224 a0001c0001t0006g0241 a0001c0001t0009g0226 a0001c0001t0009g0227 a0001c0001t0009g0228 a0001c0001t0019g0225	16	424	0.0377	-13	c.954 others(28): Show c.954+226_954+238delTTTTTTTTTTTTT		LIAS	ENSG00000121897.15	transcript	ENST00000640888.2	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
LIAT1_chr17_405325_419666	415381	GGTTGTGT others(6): Show GGTTGTGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00558.hp2 HG02165.hp1 others(11): Show HG00423.hp1 HG00558.hp2 HG02165.hp1 HG02559.hp1 HG03834.hp1 NA18939.hp2 NA18940.hp2 NA18950.hp1 NA18961.hp2 NA18968.hp2 NA18984.hp2 NA18989.hp1 NA19063.hp2 NA19082.hp2	a0002 a0003 a0020 others(1): Show a0002 a0003 a0020 a0024	a0002c0002 a0003c0003 a0020c0022 others(1): Show a0002c0002 a0003c0003 a0020c0022 a0024c0028	a0002c0002t0001 a0003c0003t0001 a0020c0022t0001 others(1): Show a0002c0002t0001 a0003c0003t0001 a0020c0022t0001 a0024c0028t0001	a0002c0002t0001g0002 a0003c0003t0001g0003 a0003c0003t0001g0039 others(2): Show a0002c0002t0001g0002 a0003c0003t0001g0003 a0003c0003t0001g0039 a0020c0022t0001g0003 a0024c0028t0001g0002	14	434	0.0323	-13	c.12 others(24): Show c.1267_*1279delGTTGTGTGTGTGT		LIAT1	ENSG00000187624.9	transcript	ENST00000360127.7	protein_coding					716		chr17	TogoVar
LILRA2_chr19_54568790_54595287	54575464	CCACGGGG others(6): Show CCACGGGGGCCAGT	C C	frameshift_variant frameshift_variant	HIGH	NA19075.hp2 NA19075.hp2	a0021 a0021	a0021c0024 a0021c0024	a0021c0024t0001 a0021c0024t0001	a0021c0024t0001g0070 a0021c0024t0001g0070	1	427	0.0023	-13	c.865 others(20): Show c.865_877delCACGGGGGCCAGT	p.His others(5): Show p.His289fs	LILRA2	ENSG00000239998.7	transcript	ENST00000391738.8	protein_coding	5/8	954/4482	865/1452	289/483			chr19	TogoVar
LILRA2_chr19_54568790_54595287	54576566	GAGGGTGG others(6): Show GAGGGTGGACAGTA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp2 HG02970.hp1 others(2): Show HG01243.hp2 HG01891.hp2 HG02970.hp1 HG03516.hp1 NA19240.hp2	a0007 a0028 a0007 a0028	a0007c0008 a0028c0015 a0007c0008 a0028c0015	a0007c0008t0012 a0028c0015t0027 a0007c0008t0012 a0028c0015t0027	a0007c0008t0012g0032 a0007c0008t0012g0056 a0007c0008t0012g0057 others(1): Show a0007c0008t0012g0032 a0007c0008t0012g0056 a0007c0008t0012g0057 a0028c0015t0027g0054	5	427	0.0117	-13	c.125 others(30): Show c.1255+464_1255+476delGACAGTAAGGGTG		LILRA2	ENSG00000239998.7	transcript	ENST00000391738.8	protein_coding	6/7					INFO_REALIGN_3_PRIME	chr19	TogoVar
LILRA5_chr19_54302070_54318166	54302136	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00323.hp2 others(212): Show HG00140.hp1 HG00140.hp2 HG00323.hp2 HG00408.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp2 NA18951.hp2 NA18953.hp2 NA18966.hp2 NA18970.hp2 NA18973.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18994.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp2 NA19006.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19065.hp1 NA19068.hp2 NA19077.hp2 NA19089.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0003 a0001c0001 a0001c0004 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0004t0004 a0002c0003t0003	a0001c0001t0001g0008 a0001c0001t0001g0024 a0001c0001t0001g0057 others(122): Show a0001c0001t0001g0008 a0001c0001t0001g0024 a0001c0001t0001g0057 a0001c0001t0001g0073 a0001c0001t0001g0105 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0168 a0001c0001t0001g0172 a0001c0001t0001g0178 a0001c0001t0001g0193 a0001c0001t0001g0198 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0028 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0050 a0001c0001t0002g0077 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0142 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0148 a0001c0001t0002g0151 a0001c0001t0002g0161 a0001c0001t0002g0167 a0001c0001t0002g0173 a0001c0001t0002g0176 a0001c0001t0002g0179 a0001c0001t0002g0181 a0001c0001t0002g0185 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0192 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0003g0009 a0001c0001t0003g0011 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0021 a0001c0001t0003g0029 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0051 a0001c0001t0003g0075 a0001c0001t0003g0078 a0001c0001t0003g0110 a0001c0001t0003g0132 a0001c0001t0003g0141 a0001c0001t0003g0143 a0001c0001t0003g0152 a0001c0001t0003g0153 a0001c0001t0003g0154 a0001c0001t0003g0157 a0001c0001t0003g0158 a0001c0001t0003g0159 a0001c0001t0003g0162 a0001c0001t0003g0165 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0171 a0001c0001t0003g0177 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0184 a0001c0001t0003g0187 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0064 a0001c0001t0004g0072 a0001c0001t0004g0074 a0001c0001t0004g0111 a0001c0001t0004g0124 a0001c0001t0004g0127 a0001c0001t0004g0134 a0001c0001t0005g0002 a0001c0001t0005g0015 a0001c0001t0005g0053 a0001c0001t0005g0060 a0001c0001t0005g0122 a0001c0001t0005g0129 a0001c0001t0005g0130 a0001c0001t0005g0131 a0001c0001t0005g0133 a0001c0001t0006g0109 a0001c0001t0006g0164 a0001c0001t0007g0012 a0001c0001t0007g0052 a0001c0001t0007g0200 a0001c0001t0008g0090 a0001c0001t0008g0121 a0001c0001t0008g0156 a0001c0001t0008g0160 a0001c0001t0008g0163 a0001c0001t0008g0170 a0001c0001t0008g0174 a0001c0001t0008g0175 a0001c0001t0008g0191 a0001c0001t0009g0018 a0001c0001t0009g0061 a0001c0001t0009g0062 a0001c0001t0009g0091 a0001c0001t0012g0125 a0001c0001t0015g0203 a0001c0001t0016g0201 a0001c0001t0017g0202 a0001c0004t0004g0112 a0002c0003t0003g0186	215	409	0.5257	-13	c.52 others(24): Show c.5264_*5276delAAAAAAAAAAAAA		LILRA5	ENSG00000187116.14	transcript	ENST00000432233.8	protein_coding					4933		chr19	TogoVar

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