Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LIMA1_chr12_50170788_50288520	50255633	TTTTAAGA others(6): Show TTTTAAGAAATAGA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0170 a0001c0001t0003g0170	1	294	0.0034	-13	c.-23 others(30): Show c.-23-6872_-23-6860delTCTATTTCTTAAA	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	1/10			chr12	TogoVar
LIMA1_chr12_50170788_50288520	50270604	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0196	1	294	0.0034	-13	c.-24 others(32): Show c.-24+12803_-24+12815delTTTTTTTTTTTTT	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	1/10			chr12	TogoVar
LIMCH1_chr4_41533157_41705044	41624543	CATTTTTA others(6): Show CATTTTTAAAGGCA	C C	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0081 a0001c0001t0002g0081	1	154	0.0065	-13	c.726 others(30): Show c.726-2163_726-2151delTTTTTAAAGGCAA	LIMCH1	ENSG00000064042.18	transcript	ENST00000503057.6	protein_coding	7/31		INFO_REALIGN_3_PRIME	chr4	TogoVar
LIMD1_chr3_45589751_45691341	45598657	GAGAGAAT others(6): Show GAGAGAATCAAGGT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0121 a0001c0003t0121	a0001c0003t0121g0152 a0001c0003t0121g0152	1	358	0.0028	-13	c.140 others(32): Show c.1408+2377_1408+2389delTCAAGGTAGAGAA	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
LIMD1_chr3_45589751_45691341	45635732	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0197 a0001c0001t0197	a0001c0001t0197g0114 a0001c0001t0197g0114	1	358	0.0028	-13	c.140 others(30): Show c.1409-402_1409-390delAAAAAAAAAAAAA	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
LIMD1_chr3_45589751_45691341	45658535	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0085 a0001c0001t0085	a0001c0001t0085g0148 a0001c0001t0085g0148	1	358	0.0028	-13	c.151 others(32): Show c.1511-7095_1511-7083delTTTTTTTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
LIMD1_chr3_45589751_45691341	45678333	GCCCAACT others(6): Show GCCCAACTCCAGCT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00423.hp2 HG00438.hp1 others(110): Show HG00099.hp2 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp2 HG00621.hp2 HG00639.hp1 HG00673.hp2 HG00733.hp2 HG01069.hp1 HG01070.hp1 HG01074.hp1 HG01106.hp2 HG01192.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01517.hp1 HG01928.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp2 HG02165.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02523.hp2 HG02622.hp1 HG02683.hp2 HG02738.hp1 HG02970.hp1 HG03490.hp2 HG03491.hp1 HG03516.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG06807.hp1 NA18747.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18951.hp1 NA18952.hp1 NA18954.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp2 NA18963.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp2 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18978.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18988.hp1 NA18991.hp1 NA18992.hp1 NA18993.hp1 NA18997.hp1 NA18998.hp1 NA19000.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19012.hp1 NA19054.hp2 NA19057.hp2 NA19062.hp2 NA19063.hp1 NA19065.hp2 NA19068.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19085.hp2 NA19087.hp2 NA19091.hp1 NA20752.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0008 others(3): Show a0001c0001 a0001c0002 a0001c0008 a0001c0014 a0002c0006 a0003c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(41): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0001t0045 a0001c0001t0047 a0001c0001t0050 a0001c0001t0135 a0001c0001t0147 a0001c0001t0154 a0001c0001t0161 a0001c0001t0162 a0001c0001t0163 a0001c0001t0168 a0001c0001t0172 a0001c0001t0180 a0001c0001t0181 a0001c0001t0182 a0001c0001t0183 a0001c0001t0184 a0001c0001t0185 a0001c0001t0186 a0001c0001t0187 a0001c0001t0190 a0001c0001t0201 a0001c0001t0202 a0001c0001t0203 a0001c0002t0024 a0001c0002t0026 a0001c0002t0089 a0001c0002t0090 a0001c0002t0104 a0001c0002t0113 a0001c0002t0115 a0001c0002t0120 a0001c0002t0126 a0001c0002t0131 a0001c0008t0004 a0001c0014t0001 a0002c0006t0008 a0002c0006t0146 a0003c0010t0105	a0001c0001t0001g0045 a0001c0001t0001g0079 a0001c0001t0001g0094 others(110): Show a0001c0001t0001g0045 a0001c0001t0001g0079 a0001c0001t0001g0094 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0186 a0001c0001t0001g0190 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0217 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0230 a0001c0001t0001g0238 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0252 a0001c0001t0001g0255 a0001c0001t0004g0167 a0001c0001t0004g0184 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0199 a0001c0001t0004g0216 a0001c0001t0004g0218 a0001c0001t0004g0233 a0001c0001t0004g0235 a0001c0001t0005g0005 a0001c0001t0005g0166 a0001c0001t0005g0170 a0001c0001t0005g0172 a0001c0001t0005g0192 a0001c0001t0005g0219 a0001c0001t0005g0222 a0001c0001t0005g0237 a0001c0001t0007g0046 a0001c0001t0007g0058 a0001c0001t0007g0059 a0001c0001t0007g0061 a0001c0001t0007g0062 a0001c0001t0007g0063 a0001c0001t0007g0065 a0001c0001t0008g0185 a0001c0001t0008g0200 a0001c0001t0008g0232 a0001c0001t0008g0236 a0001c0001t0012g0004 a0001c0001t0012g0127 a0001c0001t0012g0204 a0001c0001t0012g0240 a0001c0001t0045g0214 a0001c0001t0045g0253 a0001c0001t0047g0182 a0001c0001t0047g0226 a0001c0001t0050g0060 a0001c0001t0050g0064 a0001c0001t0135g0210 a0001c0001t0147g0175 a0001c0001t0154g0256 a0001c0001t0161g0208 a0001c0001t0162g0164 a0001c0001t0163g0191 a0001c0001t0168g0273 a0001c0001t0172g0239 a0001c0001t0180g0229 a0001c0001t0181g0220 a0001c0001t0182g0212 a0001c0001t0183g0168 a0001c0001t0184g0234 a0001c0001t0185g0100 a0001c0001t0186g0215 a0001c0001t0187g0178 a0001c0001t0190g0174 a0001c0001t0201g0056 a0001c0001t0202g0203 a0001c0001t0203g0254 a0001c0002t0024g0294 a0001c0002t0024g0296 a0001c0002t0026g0003 a0001c0002t0026g0298 a0001c0002t0089g0343 a0001c0002t0090g0295 a0001c0002t0104g0302 a0001c0002t0113g0344 a0001c0002t0115g0003 a0001c0002t0120g0028 a0001c0002t0126g0297 a0001c0002t0131g0027 a0001c0008t0004g0091 a0001c0014t0001g0169 a0002c0006t0008g0231 a0002c0006t0146g0163 a0003c0010t0105g0339	113	358	0.3156	-13	c.12 others(24): Show c.1275_*1287delCCCAACTCCAGCT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding	8/8	1275		chr3	TogoVar
LIMD1_chr3_45589751_45691341	45689808	CCCCACTT others(6): Show CCCCACTTTCTATG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0078 a0001c0001t0078	a0001c0001t0078g0129 a0001c0001t0078g0129	1	358	0.0028	-13	c.12 others(26): Show c.12750_*12762delCCCACTTTCTATG	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		3468		chr3	TogoVar
LIMK2_chr22_31207298_31285080	31255978	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02647.hp2 HG03130.hp2 HG01496.hp2 HG02647.hp2 HG03130.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0022 a0002c0002t0001 a0002c0002t0022	a0002c0002t0001g0217 a0002c0002t0001g0218 a0002c0002t0022g0261 a0002c0002t0001g0217 a0002c0002t0001g0218 a0002c0002t0022g0261	3	358	0.0084	-13	c.117 others(30): Show c.117-2287_117-2275delTTTTTTTTTTTTT	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMK2_chr22_31207298_31285080	31281200	GGTGGATC others(6): Show GGTGGATCACCTGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0293 a0001c0001t0001g0293	1	358	0.0028	-13	c.27 others(24): Show c.2760_*2772delGTGGATCACCTGA	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding		1121		chr22	TogoVar
LIMS1_chr2_108529470_108692246	108531899	CTTTTTTC others(6): Show CTTTTTTCTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0018 a0002c0003t0018	a0002c0003t0018g0005 a0002c0003t0018g0005	1	246	0.0041	-13	c.-26 others(24): Show c.-2663_-2651delTTTTTTCTTTTTT	LIMS1	ENSG00000169756.17	transcript	ENST00000544547.6	protein_coding		2570		chr2	TogoVar
LIMS1_chr2_108529470_108692246	108642352	TTTTTTGT others(6): Show TTTTTTGTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 NA18954.hp2 NA18970.hp2 others(1): Show HG01261.hp2 NA18954.hp2 NA18970.hp2 NA19088.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0078 a0001c0002t0009g0079 a0001c0002t0009g0080 others(1): Show a0001c0002t0009g0078 a0001c0002t0009g0079 a0001c0002t0009g0080 a0001c0002t0009g0081	4	246	0.0163	-13	c.33- others(30): Show c.33-17247_33-17235delGTTTTTTGTTTTT	LIMS1	ENSG00000169756.17	transcript	ENST00000544547.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIMS2_chr2_127633426_127680530	127648967	GGGGAGGG others(6): Show GGGGAGGGGAGGGA	G G	intron_variant intron_variant	MODIFIER	NA18991.hp2 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0293 a0001c0001t0002g0293	1	348	0.0029	-13	c.359 others(30): Show c.359+5444_359+5456delTCCCTCCCCTCCC	LIMS2	ENSG00000072163.20	transcript	ENST00000355119.9	protein_coding	4/9			chr2	TogoVar
LIMS2_chr2_127633426_127680530	127668668	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG03704.hp1 HG03831.hp1 others(4): Show HG01943.hp1 HG03704.hp1 HG03831.hp1 HG03927.hp2 HG04228.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0020 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0020 a0001c0002t0006	a0001c0001t0001g0214 a0001c0001t0001g0217 a0001c0001t0001g0218 others(4): Show a0001c0001t0001g0214 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0002g0215 a0001c0001t0002g0308 a0001c0001t0020g0151 a0001c0002t0006g0216	7	348	0.0201	-13	c.11+ others(28): Show c.11+6333_11+6345delTTTTTTTTTTTTT	LIMS2	ENSG00000072163.20	transcript	ENST00000355119.9	protein_coding	1/9			chr2	TogoVar
LIN28A_chr1_26405817_26434728	26405977	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19081.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0055 a0001c0001t0003g0055	1	376	0.0027	-13	c.-49 others(24): Show c.-4914_-4902delAAAAAAAAAAAAA	LIN28A	ENSG00000131914.11	transcript	ENST00000326279.11	protein_coding		4839		chr1	TogoVar
LIN28B_chr6_104952107_105088332	105008161	AGGTTATT others(6): Show AGGTTATTTTAAGC	A A	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0222 a0001c0001t0001g0222	1	278	0.0036	-13	c.199 others(32): Show c.199-18136_199-18124delGGTTATTTTAAGC	LIN28B	ENSG00000187772.8	transcript	ENST00000345080.5	protein_coding	2/3			chr6	TogoVar
LIN28B_chr6_104952107_105088332	105023488	ATAATATA others(6): Show ATAATATATATAAT	A A	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0033 a0001c0001t0002g0033	1	278	0.0036	-13	c.199 others(30): Show c.199-2807_199-2795delATATATATAATTA	LIN28B	ENSG00000187772.8	transcript	ENST00000345080.5	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr6	TogoVar
LIN28B_chr6_104952107_105088332	105085482	GTACTATG others(6): Show GTACTATGTTTCCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG01069.hp1 HG01943.hp2 others(3): Show HG00099.hp1 HG01069.hp1 HG01943.hp2 HG01978.hp2 HG02293.hp1 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0124 a0001c0001t0002g0129 a0001c0001t0002g0204 others(3): Show a0001c0001t0002g0124 a0001c0001t0002g0129 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0004g0187	6	278	0.0216	-13	c.67 others(24): Show c.6700_*6712delTACTATGTTTCCT	LIN28B	ENSG00000187772.8	transcript	ENST00000345080.5	protein_coding		2151		chr6	TogoVar
LIN52_chr14_74079956_74206493	74103427	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00639.hp2 HG00741.hp1 others(22): Show HG00323.hp1 HG00639.hp2 HG00741.hp1 HG01071.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01256.hp1 HG01257.hp1 HG01261.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01978.hp1 HG01981.hp1 HG02040.hp1 HG02129.hp2 HG02148.hp2 HG02602.hp1 HG02735.hp1 HG03491.hp1 HG03492.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0008 a0001c0001t0017 a0001c0001t0005 a0001c0001t0008 a0001c0001t0017	a0001c0001t0005g0303 a0001c0001t0005g0304 a0001c0001t0005g0305 others(21): Show a0001c0001t0005g0303 a0001c0001t0005g0304 a0001c0001t0005g0305 a0001c0001t0005g0306 a0001c0001t0005g0310 a0001c0001t0005g0315 a0001c0001t0005g0324 a0001c0001t0005g0325 a0001c0001t0005g0326 a0001c0001t0008g0003 a0001c0001t0008g0296 a0001c0001t0008g0307 a0001c0001t0008g0308 a0001c0001t0008g0309 a0001c0001t0008g0311 a0001c0001t0008g0312 a0001c0001t0008g0313 a0001c0001t0008g0327 a0001c0001t0008g0329 a0001c0001t0008g0331 a0001c0001t0008g0332 a0001c0001t0008g0333 a0001c0001t0008g0334 a0001c0001t0017g0314	25	354	0.0706	-13	c.283 others(30): Show c.283+2199_283+2211delTTTTTTTTTTTTT	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN52_chr14_74079956_74206493	74103733	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02132.hp1 NA18999.hp1 HG02027.hp2 HG02132.hp1 NA18999.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0213 a0001c0001t0007g0105 a0001c0001t0007g0121 a0001c0001t0001g0213 a0001c0001t0007g0105 a0001c0001t0007g0121	3	354	0.0085	-13	c.283 others(30): Show c.283+2519_283+2531delTTTTTTTTTTTTT	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN52_chr14_74079956_74206493	74200414	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00558.hp1 others(78): Show HG00099.hp1 HG00280.hp2 HG00558.hp1 HG00639.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01255.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01433.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp2 HG01978.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02132.hp2 HG02148.hp1 HG02257.hp2 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02809.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG02976.hp2 HG03130.hp1 HG03239.hp1 HG03471.hp2 HG03486.hp2 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG04184.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18944.hp2 NA18947.hp2 NA18962.hp2 NA18984.hp1 NA18988.hp1 NA19004.hp1 NA19007.hp1 NA19043.hp2 NA19056.hp1 NA19072.hp1 NA19077.hp1 NA19079.hp2 NA19084.hp1 NA19085.hp1 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0018 a0001c0001t0023 others(4): Show a0001c0001t0001 a0001c0001t0018 a0001c0001t0023 a0001c0001t0024 a0001c0001t0043 a0002c0003t0018 a0002c0003t0044	a0001c0001t0001g0097 a0001c0001t0001g0110 a0001c0001t0001g0152 others(78): Show a0001c0001t0001g0097 a0001c0001t0001g0110 a0001c0001t0001g0152 a0001c0001t0001g0161 a0001c0001t0001g0191 a0001c0001t0001g0205 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0335 a0001c0001t0001g0338 a0001c0001t0001g0339 a0001c0001t0001g0340 a0001c0001t0001g0341 a0001c0001t0001g0342 a0001c0001t0001g0346 a0001c0001t0001g0347 a0001c0001t0018g0085 a0001c0001t0018g0271 a0001c0001t0023g0337 a0001c0001t0023g0343 a0001c0001t0024g0229 a0001c0001t0024g0230 a0001c0001t0043g0249 a0002c0003t0018g0201 a0002c0003t0044g0187	81	354	0.2288	-13	c.14 others(24): Show c.1454_*1466delAAAAAAAAAAAAA	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	6/6	1454	INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN54_chr4_82919603_83015823	82922710	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG01109.hp1 others(6): Show HG00423.hp1 HG00438.hp1 HG01109.hp1 HG02145.hp2 HG02572.hp1 HG02647.hp2 NA18906.hp2 NA18947.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0014	a0001c0001t0003g0144 a0001c0001t0003g0151 a0001c0001t0003g0179 others(6): Show a0001c0001t0003g0144 a0001c0001t0003g0151 a0001c0001t0003g0179 a0001c0001t0004g0129 a0001c0001t0004g0157 a0001c0001t0004g0173 a0001c0001t0006g0137 a0001c0001t0009g0018 a0001c0001t0014g0300	9	304	0.0296	-13	c.53 others(24): Show c.5379_*5391delAAAAAAAAAAAAA	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding		1892		chr4	TogoVar
LIN54_chr4_82919603_83015823	82979939	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA19088.hp2 NA18940.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0213 a0001c0001t0002g0214	2	304	0.0066	-13	c.685 others(28): Show c.685-946_685-934delTTTTTTTTTTTTT	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	2/12			chr4	TogoVar
LIN54_chr4_82919603_83015823	82998006	ATAATAAT others(6): Show ATAATAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00438.hp2 others(112): Show HG00408.hp1 HG00423.hp2 HG00438.hp2 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG01081.hp1 HG01123.hp1 HG01167.hp1 HG01175.hp2 HG01346.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp2 HG01884.hp2 HG01943.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02074.hp1 HG02129.hp2 HG02145.hp1 HG02486.hp2 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03688.hp2 HG04115.hp2 HG04199.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp2 NA18941.hp2 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18947.hp1 NA18948.hp1 NA18951.hp2 NA18952.hp2 NA18956.hp2 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18966.hp2 NA18967.hp2 NA18970.hp1 NA18972.hp2 NA18973.hp1 NA18975.hp1 NA18978.hp1 NA18982.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18994.hp2 NA19000.hp1 NA19004.hp2 NA19007.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19056.hp2 NA19058.hp2 NA19064.hp1 NA19066.hp2 NA19070.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp1 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19088.hp1 NA19091.hp2 NA19240.hp1 NA20300.hp1 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0003 a0003c0005 a0001c0001 a0002c0003 a0003c0005	a0001c0001t0001 a0001c0001t0011 a0001c0001t0012 others(6): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0002c0003t0001 a0003c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(111): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0011g0005 a0001c0001t0011g0006 a0001c0001t0012g0043 a0001c0001t0012g0107 a0001c0001t0017g0010 a0001c0001t0018g0016 a0001c0001t0019g0011 a0001c0001t0021g0013 a0002c0003t0001g0061 a0003c0005t0001g0050	115	304	0.3783	-13	c.-33 others(32): Show c.-33+12465_-33+12477delATATATATTATTA	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	1/12			chr4	TogoVar
LIN54_chr4_82919603_83015823	82998571	GGAAAGAA others(6): Show GGAAAGAAAAGAGA	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02109.hp1 HG02486.hp1 others(6): Show HG01891.hp2 HG02109.hp1 HG02486.hp1 HG02615.hp2 HG02647.hp2 HG02886.hp1 HG03225.hp2 HG03471.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0001t0009 a0001c0002t0013 a0001c0001t0007 a0001c0001t0009 a0001c0002t0013	a0001c0001t0007g0113 a0001c0001t0007g0114 a0001c0001t0007g0115 others(6): Show a0001c0001t0007g0113 a0001c0001t0007g0114 a0001c0001t0007g0115 a0001c0001t0007g0116 a0001c0001t0009g0018 a0001c0001t0009g0125 a0001c0001t0009g0126 a0001c0002t0013g0026 a0001c0002t0013g0027	9	304	0.0296	-13	c.-33 others(32): Show c.-33+11900_-33+11912delTCTCTTTTCTTTC	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	1/12			chr4	TogoVar
LIN7C_chr11_27489418_27511769	27508262	ACTTTGTA others(6): Show ACTTTGTACACACT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp1 HG03195.hp1 NA18522.hp2 others(1): Show HG01175.hp1 HG03195.hp1 NA18522.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0029 a0001c0001t0055 a0001c0001t0015 a0001c0001t0029 a0001c0001t0055	a0001c0001t0015g0091 a0001c0001t0015g0093 a0001c0001t0029g0092 others(1): Show a0001c0001t0015g0091 a0001c0001t0015g0093 a0001c0001t0029g0092 a0001c0001t0055g0096	4	406	0.0099	-13	c.-15 others(24): Show c.-1523_-1511delAGTGTGTACAAAG	LIN7C	ENSG00000148943.12	transcript	ENST00000278193.7	protein_coding		1494		chr11	TogoVar
LIN7C_chr11_27489418_27511769	27508522	GCCCTTAT others(6): Show GCCCTTATTTCTTC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0024 a0001c0001t0011g0024	1	406	0.0025	-13	c.-17 others(24): Show c.-1783_-1771delGAAGAAATAAGGG	LIN7C	ENSG00000148943.12	transcript	ENST00000278193.7	protein_coding		1754		chr11	TogoVar
LIN9_chr1_226226157_226314164	226257957	GTCCCATC others(6): Show GTCCCATCGCTTGA	G G	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0276 a0001c0001t0001g0276	1	364	0.0028	-13	c.103 others(32): Show c.1039-7051_1039-7039delTCAAGCGATGGGA	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	10/14			chr1	TogoVar
LIN9_chr1_226226157_226314164	226258998	TCTTGCTC others(6): Show TCTTGCTCTGTCAC	T T	intron_variant intron_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	1	364	0.0028	-13	c.103 others(32): Show c.1038+6522_1038+6534delGTGACAGAGCAAG	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	10/14			chr1	TogoVar
LIN9_chr1_226226157_226314164	226289834	CGGGGGGG others(6): Show CGGGGGGGGGGGTG	C C	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03834.hp2 HG04228.hp2 HG03017.hp1 HG03834.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067	3	364	0.0082	-13	c.265 others(30): Show c.265-2050_265-2038delCACCCCCCCCCCC	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	4/14			chr1	TogoVar
LINGO2_chr9_27932617_29218601	28441251	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp2 HG02056.hp2 others(5): Show HG00408.hp1 HG00597.hp2 HG02056.hp2 HG02809.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0022 a0001c0001t0023	a0001c0001t0001g0041 a0001c0001t0003g0032 a0001c0001t0005g0057 others(5): Show a0001c0001t0001g0041 a0001c0001t0003g0032 a0001c0001t0005g0057 a0001c0001t0007g0006 a0001c0001t0008g0040 a0001c0001t0011g0002 a0001c0001t0022g0031 a0001c0001t0023g0037	8	62	0.1290	-13	c.-22 others(34): Show c.-228+34676_-228+34688delAAAAAAAAAAAAA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28847910	CACACATA others(6): Show CACACATATGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0055 a0001c0001t0025g0055	1	62	0.0161	-13	c.-39 others(34): Show c.-395+99895_-395+99907delCACACATATGTGT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO3_chr19_2282164_2313154	2312336	TCCTCCCA others(6): Show TCCTCCCATCTCAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19060.hp2 NA19083.hp1 NA19060.hp2 NA19083.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0006 a0001c0003t0002 a0001c0003t0006	a0001c0003t0002g0309 a0001c0003t0006g0090 a0001c0003t0002g0309 a0001c0003t0006g0090	2	418	0.0048	-13	c.-43 others(24): Show c.-4320_-4308delCTGAGATGGGAGG	LINGO3	ENSG00000220008.4	transcript	ENST00000698372.1	protein_coding		4183		chr19	TogoVar
LIPA_chr10_89208572_89256775	89225310	CGCCCTCT others(6): Show CGCCCTCTCGCGGA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00735.hp1 HG01069.hp2 others(30): Show HG00423.hp2 HG00735.hp1 HG01069.hp2 HG01071.hp2 HG01106.hp1 HG01884.hp2 HG02015.hp1 HG02135.hp2 HG02155.hp2 HG02451.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02683.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp1 HG03041.hp1 HG03225.hp1 HG03239.hp2 HG03486.hp2 HG03540.hp2 HG04184.hp1 NA18522.hp2 NA18960.hp2 NA18964.hp2 NA18986.hp1 NA19030.hp2 NA19065.hp2 NA20805.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0002c0002t0001 a0002c0002t0002 a0003c0003t0001 a0003c0003t0002 a0003c0003t0004 a0003c0003t0005	a0001c0001t0001g0145 a0001c0001t0001g0210 a0001c0001t0002g0017 others(26): Show a0001c0001t0001g0145 a0001c0001t0001g0210 a0001c0001t0002g0017 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0144 a0001c0001t0002g0147 a0001c0001t0002g0154 a0001c0001t0002g0160 a0001c0001t0002g0197 a0001c0001t0002g0242 a0001c0001t0005g0124 a0001c0001t0005g0126 a0001c0001t0005g0129 a0001c0001t0005g0140 a0002c0002t0001g0104 a0002c0002t0002g0005 a0002c0002t0002g0059 a0002c0002t0002g0086 a0003c0003t0001g0288 a0003c0003t0001g0306 a0003c0003t0001g0318 a0003c0003t0002g0286 a0003c0003t0002g0290 a0003c0003t0002g0301 a0003c0003t0002g0313 a0003c0003t0004g0298 a0003c0003t0005g0032 a0003c0003t0005g0311	33	384	0.0859	-13	c.539 others(26): Show c.539-95_539-83delTCCGCGAGAGGGC	LIPA	ENSG00000107798.18	transcript	ENST00000336233.10	protein_coding	5/9			chr10	TogoVar
LIPA_chr10_89208572_89256775	89248439	TTTATATT others(6): Show TTTATATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG03209.hp1 HG03225.hp2 others(6): Show HG01167.hp2 HG03209.hp1 HG03225.hp2 NA18946.hp1 NA18973.hp1 NA18986.hp2 NA18992.hp2 NA19080.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002	a0001c0001t0002g0051 a0001c0001t0002g0152 a0002c0002t0001g0052 others(6): Show a0001c0001t0002g0051 a0001c0001t0002g0152 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0002g0054 a0002c0002t0002g0055	9	384	0.0234	-13	c.-1- others(26): Show c.-1-803_-1-791delTAAATAAATATAA	LIPA	ENSG00000107798.18	transcript	ENST00000336233.10	protein_coding	1/9			chr10	TogoVar
LIPC_chr15_58426991_58574844	58500294	GCTGTGAG others(6): Show GCTGTGAGATGATT	G G	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG02698.hp1 HG01258.hp2 HG02698.hp1	a0001 a0003 a0001 a0003	a0001c0005 a0003c0010 a0001c0005 a0003c0010	a0001c0005t0003 a0003c0010t0001 a0001c0005t0003 a0003c0010t0001	a0001c0005t0003g0058 a0003c0010t0001g0243 a0001c0005t0003g0058 a0003c0010t0001g0243	2	358	0.0056	-13	c.89- others(30): Show c.89-38038_89-38026delCTGTGAGATGATT	LIPC	ENSG00000166035.11	transcript	ENST00000299022.10	protein_coding	1/8			chr15	TogoVar
LIPG_chr18_49557057_49604185	49586361	CACTAACA others(6): Show CACTAACAAAAGCA	C C	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0137 a0001c0001t0137	a0001c0001t0137g0100 a0001c0001t0137g0100	1	384	0.0026	-13	c.137 others(30): Show c.1377-383_1377-371delCTAACAAAAGCAA	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPH_chr3_185501262_185557588	185506830	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0288 a0001c0001t0031g0288	1	358	0.0028	-13	c.19 others(24): Show c.1947_*1959delTTTTTTTTTTTTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	10/10	1947		chr3	TogoVar
LIPI_chr21_14103813_14215955	14106197	AAAAAAAA others(6): Show AAAAAAAAATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0007 a0007	a0007c0010 a0007c0010	a0007c0010t0002 a0007c0010t0002	a0007c0010t0002g0023 a0007c0010t0002g0023	1	362	0.0028	-13	c.27 others(24): Show c.2783_*2795delATATATTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2615		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106199	AAAAAAAT others(6): Show AAAAAAATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0001 a0008c0009t0001	a0008c0009t0001g0268 a0008c0009t0001g0268	1	362	0.0028	-13	c.27 others(24): Show c.2781_*2793delATATATATTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2613		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106203	AAATATAT others(6): Show AAATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0005 a0001c0008t0005	a0001c0008t0005g0342 a0001c0008t0005g0342	1	362	0.0028	-13	c.27 others(24): Show c.2777_*2789delATATATATATATT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2609		chr21	TogoVar
LIPN_chr10_88755020_88784626	88767644	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00642.hp2 HG01106.hp2 others(14): Show HG00438.hp2 HG00642.hp2 HG01106.hp2 HG01261.hp2 HG02145.hp2 HG02738.hp1 HG02809.hp1 HG02922.hp2 HG03492.hp1 HG03669.hp1 NA18966.hp2 NA18980.hp1 NA18984.hp1 NA18990.hp1 NA18995.hp2 NA18999.hp1 NA19072.hp1	a0002 a0002	a0002c0001 a0002c0006 a0002c0001 a0002c0006	a0002c0001t0001 a0002c0001t0002 a0002c0006t0001 a0002c0001t0001 a0002c0001t0002 a0002c0006t0001	a0002c0001t0001g0011 a0002c0001t0001g0030 a0002c0001t0001g0075 others(10): Show a0002c0001t0001g0011 a0002c0001t0001g0030 a0002c0001t0001g0075 a0002c0001t0001g0091 a0002c0001t0001g0099 a0002c0001t0001g0100 a0002c0001t0001g0101 a0002c0001t0001g0112 a0002c0001t0001g0114 a0002c0001t0001g0127 a0002c0001t0002g0164 a0002c0001t0002g0171 a0002c0006t0001g0047	17	394	0.0432	-13	c.536 others(30): Show c.536-1112_536-1100delAAAAAAAAAAAAA	LIPN	ENSG00000204020.6	transcript	ENST00000404459.2	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
LIPT1_chr2_99149967_99168137	99161251	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03831.hp2 NA18972.hp1 HG02965.hp2 HG03831.hp2 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0190 a0001c0001t0001g0206 a0001c0001t0001g0184 a0001c0001t0001g0190 a0001c0001t0001g0206	3	406	0.0074	-13	c.-1- others(26): Show c.-1-677_-1-665delAAAAAAAAAAAAA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161280	AAAAAAAA others(6): Show AAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03831.hp1 HG03130.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0150 a0001c0002t0001g0129 a0001c0001t0001g0150 a0001c0002t0001g0129	2	406	0.0049	-13	c.-1- others(26): Show c.-1-675_-1-663delAAAAAAAAAAATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161284	AAAAAAAA others(6): Show AAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0125 a0001c0002t0001g0125	1	406	0.0025	-13	c.-1- others(26): Show c.-1-671_-1-659delAAAAAAATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99166883	ATATATAT others(6): Show ATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0009 a0001c0003t0001g0009	1	406	0.0025	-13	c.38 others(24): Show c.3805_*3817delTATATATATATAT	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding		3747		chr2	TogoVar
LLGL2_chr17_75520697_75580209	75560824	AAAAAAAA others(6): Show AAAAAAAAACAAAG	A A	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02922.hp2 HG02965.hp2 others(2): Show HG01099.hp2 HG02922.hp2 HG02965.hp2 HG03486.hp2 NA18522.hp1	a0004 a0008 a0027 a0004 a0008 a0027	a0004c0005 a0008c0041 a0027c0040 a0004c0005 a0008c0041 a0027c0040	a0004c0005t0004 a0008c0041t0003 a0027c0040t0003 a0004c0005t0004 a0008c0041t0003 a0027c0040t0003	a0004c0005t0004g0207 a0004c0005t0004g0208 a0004c0005t0004g0211 others(2): Show a0004c0005t0004g0207 a0004c0005t0004g0208 a0004c0005t0004g0211 a0008c0041t0003g0092 a0027c0040t0003g0188	5	382	0.0131	-13	c.530 others(30): Show c.530+1421_530+1433delAACAAAGAAAAAA	LLGL2	ENSG00000073350.14	transcript	ENST00000392550.8	protein_coding	6/25		INFO_REALIGN_3_PRIME	chr17	TogoVar
LLPH_chr12_66111555_66135750	66118518	ATTTTTAC others(6): Show ATTTTTACTGTACC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02572.hp2 HG03209.hp1 HG02572.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0017 a0001c0001t0018g0017	2	364	0.0055	-13	c.53 others(24): Show c.5309_*5321delGGTACAGTAAAAA	LLPH	ENSG00000139233.7	transcript	ENST00000266604.7	protein_coding	3/3	5309		chr12	TogoVar
LMAN1_chr18_59322823_59364265	59346209	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA19086.hp1 NA18981.hp1 NA19086.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0050 a0002c0002t0001g0050	2	386	0.0052	-13	c.823 others(28): Show c.823-171_823-159delAAAAAAAAAAAAA	LMAN1	ENSG00000074695.6	transcript	ENST00000251047.6	protein_coding	7/12			chr18	TogoVar
LMAN1_chr18_59322823_59364265	59347320	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02897.hp1 HG02976.hp2 others(2): Show HG02723.hp2 HG02897.hp1 HG02976.hp2 HG03486.hp2 NA18906.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0003c0005t0007 a0001c0001t0001 a0003c0005t0007	a0001c0001t0001g0200 a0003c0005t0007g0066 a0003c0005t0007g0067 others(2): Show a0001c0001t0001g0200 a0003c0005t0007g0066 a0003c0005t0007g0067 a0003c0005t0007g0069 a0003c0005t0007g0070	5	386	0.0130	-13	c.822 others(28): Show c.822+180_822+192delTTTTTTTTTTTTT	LMAN1	ENSG00000074695.6	transcript	ENST00000251047.6	protein_coding	7/12			chr18	TogoVar

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