Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LONP1_chr19_5686834_5725146	5715643	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0213	1	386	0.0026	-13	c.430 others(30): Show c.430-1385_430-1373delTTTTTTTTTTTTT	LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	1/17			chr19	TogoVar
LONRF3_chrX_118969618_119023355	119022189	CCACATAA others(6): Show CCACATAAAGTGTA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00323.hp1 others(74): Show HG00099.hp1 HG00140.hp1 HG00323.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01109.hp1 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01515.hp1 HG01517.hp2 HG01981.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02451.hp2 HG02486.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03704.hp1 HG03710.hp1 HG03927.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 NA18522.hp1 NA18941.hp2 NA18948.hp1 NA18950.hp2 NA18953.hp1 NA18957.hp1 NA18968.hp1 NA18973.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp1 NA19003.hp1 NA19007.hp1 NA19010.hp2 NA19030.hp1 NA19043.hp1 NA19057.hp1 NA19063.hp1 NA19074.hp2 NA19075.hp1 NA19084.hp2 NA19240.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0001c0004 a0002c0006 others(1): Show a0001c0002 a0001c0004 a0002c0006 a0005c0010	a0001c0002t0001 a0001c0004t0001 a0002c0006t0001 others(1): Show a0001c0002t0001 a0001c0004t0001 a0002c0006t0001 a0005c0010t0007	a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0005 others(67): Show a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0018 a0001c0002t0001g0019 a0001c0002t0001g0022 a0001c0002t0001g0048 a0001c0002t0001g0116 a0001c0002t0001g0117 a0001c0002t0001g0121 a0001c0002t0001g0125 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0142 a0001c0002t0001g0143 a0001c0002t0001g0144 a0001c0002t0001g0145 a0001c0002t0001g0146 a0001c0002t0001g0147 a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0001g0151 a0001c0002t0001g0154 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0164 a0001c0002t0001g0165 a0001c0002t0001g0166 a0001c0002t0001g0167 a0001c0002t0001g0168 a0001c0002t0001g0169 a0001c0002t0001g0170 a0001c0002t0001g0172 a0001c0002t0001g0173 a0001c0002t0001g0177 a0001c0002t0001g0189 a0001c0002t0001g0267 a0001c0004t0001g0101 a0001c0004t0001g0102 a0001c0004t0001g0126 a0001c0004t0001g0129 a0001c0004t0001g0153 a0001c0004t0001g0175 a0001c0004t0001g0200 a0001c0004t0001g0201 a0001c0004t0001g0253 a0001c0004t0001g0258 a0001c0004t0001g0277 a0002c0006t0001g0019 a0002c0006t0001g0157 a0002c0006t0001g0158 a0002c0006t0001g0265 a0005c0010t0007g0176	77	309	0.2492	-13	c.45 others(24): Show c.4500_*4512delCACATAAAGTGTA	LONRF3	ENSG00000175556.17	transcript	ENST00000371628.8	protein_coding		3835		chrX	TogoVar
LOXHD1_chr18_46472273_46662220	46591881	ACCAAGCA others(6): Show ACCAAGCAGGAGTT	A A	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0024 a0024	a0024c0038 a0024c0038	a0024c0038t0001 a0024c0038t0001	a0024c0038t0001g0045 a0024c0038t0001g0045	1	270	0.0037	-13	c.165 others(28): Show c.1654+39_1654+51delAACTCCTGCTTGG	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	12/40			chr18	TogoVar
LOXL2_chr8_23291897_23409120	23383646	GTTTTTTT others(6): Show GTTTTTTTTTTGTT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00423.hp2 HG00558.hp1 others(90): Show HG00099.hp2 HG00423.hp2 HG00558.hp1 HG00609.hp1 HG00621.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01106.hp1 HG01192.hp1 HG01496.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp1 HG01952.hp2 HG01981.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02055.hp2 HG02129.hp2 HG02145.hp1 HG02257.hp1 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02886.hp2 HG02965.hp1 HG03041.hp1 HG03130.hp2 HG03195.hp1 HG03239.hp2 HG03486.hp1 HG03491.hp2 HG03669.hp2 HG03688.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18947.hp1 NA18950.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18968.hp1 NA18969.hp2 NA18979.hp1 NA18983.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp2 NA19012.hp2 NA19054.hp2 NA19060.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19072.hp2 NA19081.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0002 a0001c0003 others(22): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008 a0001c0011 a0001c0012 a0001c0018 a0001c0020 a0001c0028 a0001c0029 a0001c0037 a0001c0040 a0001c0056 a0002c0004 a0002c0009 a0002c0010 a0002c0014 a0002c0022 a0002c0039 a0002c0042 a0002c0051 a0002c0054 a0003c0016 a0003c0048 a0006c0046	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(38): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0008 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0008t0003 a0001c0008t0005 a0001c0011t0001 a0001c0011t0005 a0001c0012t0002 a0001c0018t0001 a0001c0020t0001 a0001c0028t0001 a0001c0028t0002 a0001c0029t0003 a0001c0037t0003 a0001c0040t0002 a0001c0056t0001 a0002c0004t0001 a0002c0004t0002 a0002c0004t0003 a0002c0004t0007 a0002c0009t0002 a0002c0010t0002 a0002c0014t0004 a0002c0014t0005 a0002c0022t0001 a0002c0039t0021 a0002c0042t0001 a0002c0051t0003 a0002c0054t0002 a0003c0016t0001 a0003c0048t0001 a0006c0046t0002	a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0104 others(90): Show a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0104 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0002g0120 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0148 a0001c0001t0002g0170 a0001c0001t0002g0177 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0003g0124 a0001c0001t0003g0132 a0001c0001t0003g0158 a0001c0001t0003g0166 a0001c0001t0003g0174 a0001c0001t0005g0092 a0001c0001t0005g0102 a0001c0001t0005g0103 a0001c0001t0006g0202 a0001c0002t0001g0163 a0001c0002t0002g0114 a0001c0002t0002g0151 a0001c0002t0002g0155 a0001c0002t0002g0247 a0001c0002t0003g0093 a0001c0002t0003g0167 a0001c0002t0003g0168 a0001c0002t0003g0169 a0001c0002t0003g0199 a0001c0002t0003g0207 a0001c0002t0008g0189 a0001c0003t0001g0087 a0001c0003t0001g0110 a0001c0003t0001g0162 a0001c0003t0001g0212 a0001c0003t0001g0252 a0001c0003t0002g0105 a0001c0003t0002g0107 a0001c0003t0002g0116 a0001c0003t0002g0154 a0001c0003t0002g0157 a0001c0003t0003g0108 a0001c0003t0003g0156 a0001c0003t0003g0164 a0001c0008t0003g0173 a0001c0008t0005g0111 a0001c0008t0005g0190 a0001c0008t0005g0191 a0001c0008t0005g0192 a0001c0008t0005g0198 a0001c0011t0001g0204 a0001c0011t0001g0217 a0001c0011t0005g0119 a0001c0012t0002g0085 a0001c0012t0002g0086 a0001c0018t0001g0109 a0001c0020t0001g0125 a0001c0020t0001g0126 a0001c0020t0001g0127 a0001c0028t0001g0142 a0001c0028t0002g0141 a0001c0029t0003g0196 a0001c0029t0003g0216 a0001c0037t0003g0135 a0001c0040t0002g0214 a0001c0056t0001g0091 a0002c0004t0001g0312 a0002c0004t0002g0206 a0002c0004t0003g0147 a0002c0004t0007g0188 a0002c0009t0002g0095 a0002c0009t0002g0123 a0002c0009t0002g0128 a0002c0009t0002g0144 a0002c0010t0002g0209 a0002c0014t0004g0121 a0002c0014t0005g0117 a0002c0014t0005g0201 a0002c0014t0005g0205 a0002c0014t0005g0208 a0002c0014t0005g0210 a0002c0022t0001g0106 a0002c0039t0021g0347 a0002c0042t0001g0311 a0002c0051t0003g0113 a0002c0054t0002g0197 a0003c0016t0001g0172 a0003c0048t0001g0143 a0006c0046t0002g0200	93	348	0.2672	-13	c.-83 others(32): Show c.-83-15225_-83-15213delAACAAAAAAAAAA	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	1/13			chr8	TogoVar
LPAR4_chrX_78742720_78763714	78747895	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18977.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0045 a0001c0001t0045	a0001c0001t0045g0001 a0001c0001t0045g0001	1	324	0.0031	-13	c.-41 others(22): Show c.-415_-403delAAAAAAAAAAAAA	LPAR4	ENSG00000147145.14	transcript	ENST00000614823.5	protein_coding	1/5	6944	INFO_REALIGN_3_PRIME	chrX	TogoVar
LPCAT1_chr5_1456427_1528960	1470356	CCAGGAGT others(6): Show CCAGGAGTCTGCAG	C C	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0016 a0001c0003t0016	a0001c0003t0016g0369 a0001c0003t0016g0369	1	386	0.0026	-13	c.127 others(30): Show c.1278+457_1278+469delCTGCAGACTCCTG	LPCAT1	ENSG00000153395.10	transcript	ENST00000283415.4	protein_coding	12/13			chr5	TogoVar
LPCAT1_chr5_1456427_1528960	1481020	CAGGGCCT others(6): Show CAGGGCCTGCACCA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00438.hp2 others(116): Show HG00140.hp1 HG00408.hp1 HG00438.hp2 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01109.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp2 HG01433.hp2 HG01515.hp2 HG01884.hp1 HG01943.hp1 HG01952.hp2 HG01978.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02056.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp1 HG03098.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp1 HG03516.hp2 HG03579.hp2 HG03669.hp1 HG03688.hp1 HG04228.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18947.hp2 NA18949.hp2 NA18952.hp1 NA18953.hp2 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18964.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp2 NA18988.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18994.hp2 NA18997.hp2 NA18999.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19068.hp2 NA19077.hp2 NA19080.hp1 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp2 NA19240.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0009 a0001c0018 a0001c0019 a0001c0021 a0002c0005 a0003c0008 a0004c0012	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(22): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0025 a0001c0001t0030 a0001c0002t0002 a0001c0002t0006 a0001c0003t0009 a0001c0003t0014 a0001c0004t0002 a0001c0004t0005 a0001c0004t0010 a0001c0004t0011 a0001c0007t0005 a0001c0009t0012 a0001c0018t0010 a0001c0019t0012 a0001c0021t0002 a0002c0005t0003 a0003c0008t0002 a0004c0012t0035	a0001c0001t0002g0005 a0001c0001t0002g0014 a0001c0001t0002g0028 others(110): Show a0001c0001t0002g0005 a0001c0001t0002g0014 a0001c0001t0002g0028 a0001c0001t0002g0038 a0001c0001t0002g0044 a0001c0001t0002g0058 a0001c0001t0002g0069 a0001c0001t0002g0076 a0001c0001t0002g0082 a0001c0001t0002g0085 a0001c0001t0002g0087 a0001c0001t0002g0093 a0001c0001t0002g0096 a0001c0001t0002g0124 a0001c0001t0002g0127 a0001c0001t0002g0133 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0144 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0187 a0001c0001t0002g0196 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0214 a0001c0001t0002g0222 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0229 a0001c0001t0002g0238 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0262 a0001c0001t0002g0295 a0001c0001t0002g0297 a0001c0001t0002g0300 a0001c0001t0002g0305 a0001c0001t0002g0311 a0001c0001t0002g0319 a0001c0001t0002g0320 a0001c0001t0002g0322 a0001c0001t0002g0331 a0001c0001t0002g0347 a0001c0001t0002g0348 a0001c0001t0002g0351 a0001c0001t0002g0361 a0001c0001t0002g0362 a0001c0001t0005g0026 a0001c0001t0005g0056 a0001c0001t0005g0167 a0001c0001t0005g0168 a0001c0001t0005g0173 a0001c0001t0005g0265 a0001c0001t0005g0294 a0001c0001t0005g0316 a0001c0001t0005g0358 a0001c0001t0005g0359 a0001c0001t0006g0135 a0001c0001t0011g0326 a0001c0001t0011g0339 a0001c0001t0018g0018 a0001c0001t0019g0070 a0001c0001t0020g0307 a0001c0001t0025g0059 a0001c0001t0030g0046 a0001c0002t0002g0051 a0001c0002t0006g0086 a0001c0003t0009g0012 a0001c0003t0009g0039 a0001c0003t0009g0239 a0001c0003t0009g0240 a0001c0003t0009g0270 a0001c0003t0014g0016 a0001c0003t0014g0017 a0001c0004t0002g0107 a0001c0004t0002g0115 a0001c0004t0002g0175 a0001c0004t0002g0182 a0001c0004t0002g0246 a0001c0004t0002g0306 a0001c0004t0002g0337 a0001c0004t0002g0343 a0001c0004t0002g0357 a0001c0004t0005g0006 a0001c0004t0005g0029 a0001c0004t0005g0099 a0001c0004t0005g0103 a0001c0004t0005g0138 a0001c0004t0005g0154 a0001c0004t0005g0159 a0001c0004t0005g0160 a0001c0004t0005g0221 a0001c0004t0005g0236 a0001c0004t0005g0290 a0001c0004t0010g0001 a0001c0004t0010g0178 a0001c0004t0011g0170 a0001c0004t0011g0356 a0001c0007t0005g0104 a0001c0009t0012g0105 a0001c0009t0012g0114 a0001c0018t0010g0179 a0001c0019t0012g0280 a0001c0021t0002g0366 a0002c0005t0003g0186 a0002c0005t0003g0308 a0003c0008t0002g0045 a0003c0008t0002g0123 a0004c0012t0035g0282	119	386	0.3083	-13	c.727 others(26): Show c.727-57_727-45delTGGTGCAGGCCCT	LPCAT1	ENSG00000153395.10	transcript	ENST00000283415.4	protein_coding	6/13			chr5	TogoVar
LPCAT2_chr16_55504072_55591666	55579939	TGCACTGG others(6): Show TGCACTGGACTGAA	T T	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02622.hp1 HG02886.hp2 others(1): Show HG02559.hp1 HG02622.hp1 HG02886.hp2 HG03225.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0009 a0002c0001t0024 a0002c0001t0027 a0002c0001t0009 a0002c0001t0024 a0002c0001t0027	a0002c0001t0009g0093 a0002c0001t0024g0090 a0002c0001t0027g0014 a0002c0001t0009g0093 a0002c0001t0024g0090 a0002c0001t0027g0014	4	314	0.0127	-13	c.145 others(30): Show c.1450+698_1450+710delACTGGACTGAAGC	LPCAT2	ENSG00000087253.13	transcript	ENST00000262134.10	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LPIN1_chr2_11741632_11832409	11759123	GCTTTCTT others(6): Show GCTTTCTTTCTTTT	G G	intron_variant intron_variant	MODIFIER	HG03688.hp2 NA20805.hp2 HG03688.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0084 a0001c0001t0011g0085 a0001c0001t0011g0084 a0001c0001t0011g0085	2	278	0.0072	-13	c.-9- others(28): Show c.-9-6397_-9-6385delTCTTTCTTTCTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN1_chr2_11741632_11832409	11759177	CTTTCTTT others(6): Show CTTTCTTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01167.hp2 NA18906.hp1 HG01070.hp2 HG01167.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0013 a0002c0007 a0002c0009 a0001c0013 a0002c0007 a0002c0009	a0001c0013t0001 a0002c0007t0011 a0002c0009t0002 a0001c0013t0001 a0002c0007t0011 a0002c0009t0002	a0001c0013t0001g0021 a0002c0007t0011g0025 a0002c0009t0002g0022 a0001c0013t0001g0021 a0002c0007t0011g0025 a0002c0009t0002g0022	3	278	0.0108	-13	c.-9- others(28): Show c.-9-6340_-9-6328delTCTTTCTTTCTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN2_chr18_2911999_3018144	2944333	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03195.hp2 HG03516.hp2 others(1): Show HG02486.hp1 HG03195.hp2 HG03516.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0073 a0001c0001t0082 a0001c0001t0083 others(1): Show a0001c0001t0073 a0001c0001t0082 a0001c0001t0083 a0001c0001t0090	a0001c0001t0073g0016 a0001c0001t0082g0017 a0001c0001t0083g0095 others(1): Show a0001c0001t0073g0016 a0001c0001t0082g0017 a0001c0001t0083g0095 a0001c0001t0090g0162	4	380	0.0105	-13	c.591 others(30): Show c.591-3634_591-3622delAAAAAAAAAAAAA	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	4/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	2955388	GGGTGCCA others(6): Show GGGTGCCACACAAA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp2 HG00423.hp1 others(142): Show HG00099.hp2 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG02040.hp2 HG02056.hp2 HG02074.hp2 HG02083.hp1 HG02148.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG02896.hp1 HG02965.hp1 HG02976.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18955.hp1 NA18956.hp2 NA18960.hp2 NA18962.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp2 NA18975.hp2 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18997.hp1 NA18999.hp1 NA19000.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19043.hp2 NA19057.hp2 NA19060.hp1 NA19064.hp2 NA19065.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19081.hp1 NA19086.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp2 NA20300.hp2 NA20752.hp1 NA21309.hp1	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0006 a0009	a0001c0001 a0001c0005 a0001c0009 others(4): Show a0001c0001 a0001c0005 a0001c0009 a0002c0004 a0005c0011 a0006c0012 a0009c0016	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(56): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0039 a0001c0001t0040 a0001c0001t0043 a0001c0001t0047 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0069 a0001c0001t0070 a0001c0001t0071 a0001c0001t0075 a0001c0001t0076 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0089 a0001c0001t0094 a0001c0001t0096 a0001c0001t0097 a0001c0001t0098 a0001c0001t0102 a0001c0001t0110 a0001c0005t0001 a0001c0009t0003 a0002c0004t0027 a0005c0011t0007 a0006c0012t0001 a0009c0016t0064	a0001c0001t0001g0038 a0001c0001t0001g0051 a0001c0001t0001g0053 others(141): Show a0001c0001t0001g0038 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0074 a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0096 a0001c0001t0001g0107 a0001c0001t0001g0120 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0186 a0001c0001t0001g0236 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0268 a0001c0001t0001g0274 a0001c0001t0001g0279 a0001c0001t0001g0291 a0001c0001t0001g0326 a0001c0001t0002g0093 a0001c0001t0003g0006 a0001c0001t0003g0037 a0001c0001t0003g0040 a0001c0001t0003g0049 a0001c0001t0003g0057 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0071 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0102 a0001c0001t0003g0115 a0001c0001t0003g0178 a0001c0001t0004g0184 a0001c0001t0004g0373 a0001c0001t0005g0035 a0001c0001t0005g0036 a0001c0001t0006g0001 a0001c0001t0006g0041 a0001c0001t0006g0050 a0001c0001t0006g0089 a0001c0001t0006g0090 a0001c0001t0006g0091 a0001c0001t0006g0097 a0001c0001t0006g0099 a0001c0001t0006g0289 a0001c0001t0007g0098 a0001c0001t0007g0100 a0001c0001t0007g0168 a0001c0001t0007g0170 a0001c0001t0007g0180 a0001c0001t0007g0187 a0001c0001t0007g0188 a0001c0001t0007g0328 a0001c0001t0013g0048 a0001c0001t0013g0094 a0001c0001t0013g0114 a0001c0001t0013g0122 a0001c0001t0013g0334 a0001c0001t0016g0088 a0001c0001t0016g0109 a0001c0001t0016g0175 a0001c0001t0016g0176 a0001c0001t0016g0181 a0001c0001t0016g0257 a0001c0001t0017g0052 a0001c0001t0017g0062 a0001c0001t0017g0064 a0001c0001t0017g0079 a0001c0001t0017g0106 a0001c0001t0020g0332 a0001c0001t0021g0303 a0001c0001t0021g0327 a0001c0001t0021g0335 a0001c0001t0021g0338 a0001c0001t0023g0046 a0001c0001t0024g0223 a0001c0001t0024g0224 a0001c0001t0028g0009 a0001c0001t0028g0010 a0001c0001t0029g0014 a0001c0001t0030g0183 a0001c0001t0032g0154 a0001c0001t0032g0160 a0001c0001t0032g0161 a0001c0001t0034g0204 a0001c0001t0034g0205 a0001c0001t0034g0317 a0001c0001t0035g0336 a0001c0001t0035g0337 a0001c0001t0036g0157 a0001c0001t0036g0158 a0001c0001t0037g0092 a0001c0001t0037g0172 a0001c0001t0039g0033 a0001c0001t0039g0034 a0001c0001t0040g0366 a0001c0001t0040g0367 a0001c0001t0043g0301 a0001c0001t0043g0302 a0001c0001t0047g0221 a0001c0001t0047g0222 a0001c0001t0053g0045 a0001c0001t0054g0189 a0001c0001t0055g0110 a0001c0001t0059g0081 a0001c0001t0060g0083 a0001c0001t0061g0173 a0001c0001t0062g0368 a0001c0001t0063g0333 a0001c0001t0065g0256 a0001c0001t0066g0047 a0001c0001t0067g0182 a0001c0001t0069g0177 a0001c0001t0070g0185 a0001c0001t0071g0011 a0001c0001t0075g0073 a0001c0001t0076g0138 a0001c0001t0083g0095 a0001c0001t0084g0129 a0001c0001t0085g0159 a0001c0001t0086g0134 a0001c0001t0089g0130 a0001c0001t0094g0360 a0001c0001t0096g0084 a0001c0001t0097g0078 a0001c0001t0098g0259 a0001c0001t0102g0358 a0001c0001t0110g0331 a0001c0005t0001g0055 a0001c0009t0003g0058 a0002c0004t0027g0127 a0002c0004t0027g0226 a0005c0011t0007g0139 a0006c0012t0001g0054 a0009c0016t0064g0087	145	380	0.3816	-13	c.193 others(28): Show c.193-802_193-790delTTTGTGTGGCACC	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	2958148	AAAAAAAA others(6): Show AAAAAAAAAACAAC	A A	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00673.hp1 NA18950.hp2 others(3): Show HG00558.hp2 HG00673.hp1 NA18950.hp2 NA18988.hp1 NA18989.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0008 a0001c0001t0013 others(1): Show a0001c0001t0003 a0001c0001t0008 a0001c0001t0013 a0001c0001t0045	a0001c0001t0003g0006 a0001c0001t0003g0075 a0001c0001t0003g0076 others(3): Show a0001c0001t0003g0006 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0008g0269 a0001c0001t0013g0114 a0001c0001t0045g0238	6	380	0.0158	-13	c.192 others(30): Show c.192+2488_192+2500delGTTGTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	2964282	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0093 a0001c0018t0093	a0001c0018t0093g0140 a0001c0018t0093g0140	1	380	0.0026	-13	c.-9- others(28): Show c.-9-3446_-9-3434delTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	1/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	2996467	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02615.hp1 HG02717.hp1 HG02451.hp1 HG02615.hp1 HG02717.hp1	a0001 a0002 a0001 a0002	a0001c0018 a0002c0004 a0001c0018 a0002c0004	a0001c0018t0093 a0002c0004t0027 a0001c0018t0093 a0002c0004t0027	a0001c0018t0093g0140 a0002c0004t0027g0127 a0002c0004t0027g0226 a0001c0018t0093g0140 a0002c0004t0027g0127 a0002c0004t0027g0226	3	380	0.0079	-13	c.-10 others(32): Show c.-10+16607_-10+16619delAAAAAAAAAAAAA	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	1/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	3002236	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02647.hp1 HG02622.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0366 a0001c0001t0040g0367 a0001c0001t0040g0366 a0001c0001t0040g0367	2	380	0.0053	-13	c.-10 others(32): Show c.-10+10838_-10+10850delTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	1/19			chr18	TogoVar
LPO_chr17_58233584_58273518	58241125	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0002 a0001c0012t0002	a0001c0012t0002g0069 a0001c0012t0002g0069	1	328	0.0031	-13	c.-2- others(28): Show c.-2-1842_-2-1830delTTTTTTTTTTTTT	LPO	ENSG00000167419.11	transcript	ENST00000262290.9	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
LPP_chr3_188149157_188895671	188457802	GGGAGGCT others(6): Show GGGAGGCTGAGGCA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0003 a0003	a0003c0011 a0003c0011	a0003c0011t0004 a0003c0011t0004	a0003c0011t0004g0071 a0003c0011t0004g0071	1	76	0.0132	-13	c.194 others(32): Show c.194-26785_194-26773delGCTGAGGCAGGAG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188785478	TATATATA others(6): Show TATATATATTCATC	T T	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0035 a0004c0010t0035	a0004c0010t0035g0060 a0004c0010t0035g0060	1	76	0.0132	-13	c.141 others(34): Show c.1410+25205_1410+25217delTCATCATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188844542	TTGTGTTA others(6): Show TTGTGTTAAATCAA	T T	intron_variant intron_variant	MODIFIER	HG03453.hp1 NA19043.hp2 HG03453.hp1 NA19043.hp2	a0002 a0003 a0002 a0003	a0002c0003 a0003c0011 a0002c0003 a0003c0011	a0002c0003t0029 a0003c0011t0048 a0002c0003t0029 a0003c0011t0048	a0002c0003t0029g0059 a0003c0011t0048g0074 a0002c0003t0029g0059 a0003c0011t0048g0074	2	76	0.0263	-13	c.141 others(34): Show c.1411-21656_1411-21644delGTGTTAAATCAAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRAT_chr4_154739000_154758120	154745006	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03195.hp2 HG03209.hp1 others(1): Show HG02145.hp2 HG03195.hp2 HG03209.hp1 NA18989.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0014 a0001c0001t0002 a0002c0003t0014	a0001c0001t0002g0036 a0002c0003t0014g0018 a0001c0001t0002g0036 a0002c0003t0014g0018	4	398	0.0101	-13	c.540 others(28): Show c.540+158_540+170delTTTTTTTTTTTTT	LRAT	ENSG00000121207.12	transcript	ENST00000336356.4	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRBA_chr4_150259435_151020284	150371182	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02818.hp2 HG02647.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0018 a0001c0001t0002g0019	2	180	0.0111	-13	c.719 others(34): Show c.7195-21036_7195-21024delAAAAAAAAAAAAA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	47/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150639859	ATATATAT others(6): Show ATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	180	0.0056	-13	c.592 others(34): Show c.5922-40741_5922-40729delATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685410	ATATATAT others(6): Show ATATATATATATTT	A A	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0152 a0002c0002t0001g0152	1	180	0.0056	-13	c.575 others(32): Show c.5755-1706_5755-1694delAAATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150788239	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00597.hp1 HG00735.hp2 others(30): Show HG00544.hp2 HG00597.hp1 HG00735.hp2 HG00738.hp1 HG01167.hp1 HG01243.hp2 HG01517.hp2 HG01891.hp1 HG01934.hp2 HG02027.hp1 HG02074.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp2 HG02559.hp1 HG02723.hp1 HG03654.hp2 HG03831.hp2 HG04115.hp2 NA18522.hp1 NA18612.hp1 NA18941.hp2 NA18952.hp1 NA18957.hp1 NA18959.hp1 NA18962.hp2 NA18966.hp1 NA18979.hp2 NA18986.hp1 NA19007.hp1 NA19060.hp1 NA19062.hp2 NA19088.hp2	a0001 a0003 a0014 others(2): Show a0001 a0003 a0014 a0019 a0022	a0001c0001 a0001c0005 a0003c0012 others(4): Show a0001c0001 a0001c0005 a0003c0012 a0003c0035 a0014c0034 a0019c0033 a0022c0039	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0003c0012t0003 a0003c0035t0003 a0014c0034t0003 a0019c0033t0001 a0022c0039t0001	a0001c0001t0001g0009 a0001c0001t0001g0014 a0001c0001t0001g0055 others(30): Show a0001c0001t0001g0009 a0001c0001t0001g0014 a0001c0001t0001g0055 a0001c0001t0001g0067 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0100 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0119 a0001c0001t0002g0076 a0001c0005t0001g0004 a0003c0012t0003g0078 a0003c0035t0003g0154 a0014c0034t0003g0164 a0019c0033t0001g0074 a0022c0039t0001g0073	33	180	0.1833	-13	c.558 others(32): Show c.5580+9829_5580+9841delAAAAAAAAAAAAA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	34/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151011597	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03579.hp1 NA20129.hp2 HG01243.hp1 HG03579.hp1 NA20129.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0003 a0001c0007t0003	a0001c0007t0003g0165 a0001c0007t0003g0166 a0001c0007t0003g0167 a0001c0007t0003g0165 a0001c0007t0003g0166 a0001c0007t0003g0167	3	180	0.0167	-13	c.216 others(30): Show c.216+2817_216+2829delTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRCH1_chr13_46548170_46749898	46550139	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0257 a0001c0003t0004g0257	1	274	0.0037	-13	c.-32 others(24): Show c.-3257_-3245delAAAAAAAAAAAAA	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding		3030		chr13	TogoVar
LRCH1_chr13_46548170_46749898	46619100	CTTCCTTC others(6): Show CTTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00423.hp2 HG01169.hp2 others(16): Show HG00099.hp2 HG00423.hp2 HG01169.hp2 HG01891.hp2 HG02109.hp2 HG02165.hp1 HG03471.hp2 HG03704.hp1 HG03704.hp2 HG04184.hp1 NA18955.hp2 NA18960.hp1 NA18974.hp2 NA19009.hp2 NA19010.hp2 NA19043.hp2 NA19057.hp2 NA19088.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0015 a0001c0002t0022 a0001c0003t0004	a0001c0001t0001g0255 a0001c0001t0001g0258 a0001c0001t0001g0267 others(16): Show a0001c0001t0001g0255 a0001c0001t0001g0258 a0001c0001t0001g0267 a0001c0001t0001g0270 a0001c0001t0002g0055 a0001c0001t0002g0177 a0001c0001t0002g0263 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0271 a0001c0001t0002g0272 a0001c0001t0003g0029 a0001c0001t0007g0201 a0001c0001t0007g0202 a0001c0001t0015g0260 a0001c0001t0015g0261 a0001c0001t0015g0262 a0001c0002t0022g0106 a0001c0003t0004g0034	19	274	0.0693	-13	c.308 others(32): Show c.308-31098_308-31086delCCTTCCTTCCTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46620464	TCACTAAA others(6): Show TCACTAAAAAAATG	T T	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0186 a0001c0002t0001g0186	1	274	0.0037	-13	c.308 others(32): Show c.308-29736_308-29724delCACTAAAAAAATG	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19			chr13	TogoVar
LRCH1_chr13_46548170_46749898	46657500	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03041.hp1 HG04228.hp1 others(1): Show HG02922.hp1 HG03041.hp1 HG04228.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0012	a0001c0001t0001 a0001c0003t0004 a0001c0004t0009 others(1): Show a0001c0001t0001 a0001c0003t0004 a0001c0004t0009 a0001c0012t0031	a0001c0001t0001g0012 a0001c0003t0004g0088 a0001c0004t0009g0004 others(1): Show a0001c0001t0001g0012 a0001c0003t0004g0088 a0001c0004t0009g0004 a0001c0012t0031g0161	4	274	0.0146	-13	c.452 others(30): Show c.452+7185_452+7197delTTTTTTTTTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH2_chrX_115105616_115239096	115109232	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0201 a0001c0001t0002g0201	1	238	0.0042	-13	c.39 others(24): Show c.3971_*3983delAAAAAAAAAAAAA	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding		1383		chrX	TogoVar
LRCH2_chrX_115105616_115239096	115221203	AAAAAAAA others(6): Show AAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02809.hp2 HG02818.hp2 others(3): Show HG02109.hp1 HG02809.hp2 HG02818.hp2 HG02965.hp1 HG03486.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0157 a0001c0001t0002g0195 a0001c0001t0002g0196 others(3): Show a0001c0001t0002g0157 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199	6	238	0.0252	-13	c.349 others(32): Show c.349+12477_349+12489delATATATTTTTTTT	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding	1/20			chrX	TogoVar
LRCH2_chrX_115105616_115239096	115221205	AAAAAAAT others(6): Show AAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02257.hp1 HG02630.hp2 others(2): Show HG02145.hp1 HG02257.hp1 HG02630.hp2 HG02723.hp2 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0040 a0001c0001t0002g0160 a0001c0001t0002g0161 others(2): Show a0001c0001t0002g0040 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0203	5	238	0.0210	-13	c.349 others(32): Show c.349+12475_349+12487delATATATATTTTTT	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding	1/20			chrX	TogoVar
LRCH2_chrX_115105616_115239096	115221209	AAATATAT others(6): Show AAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02451.hp2 HG02647.hp1 others(1): Show HG01884.hp1 HG02451.hp2 HG02647.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0224 others(1): Show a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0224 a0001c0001t0002g0225	4	238	0.0168	-13	c.349 others(32): Show c.349+12471_349+12483delATATATATATATT	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding	1/20			chrX	TogoVar
LRCH3_chr3_197786254_197893436	197825464	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0047 a0002c0006t0047	a0002c0006t0047g0059 a0002c0006t0047g0059	1	292	0.0034	-13	c.641 others(30): Show c.641-1393_641-1381delTTTTTTTTTTTTT	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH4_chr7_100569011_100591129	100570843	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp2 NA19091.hp1 NA19091.hp2 HG03471.hp2 NA19091.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0037 a0001c0001t0001 a0001c0001t0037	a0001c0001t0001g0002 a0001c0001t0001g0041 a0001c0001t0037g0111 a0001c0001t0001g0002 a0001c0001t0001g0041 a0001c0001t0037g0111	3	370	0.0081	-13	c.42 others(24): Show c.4251_*4263delTTTTTTTTTTTTT	LRCH4	ENSG00000077454.17	transcript	ENST00000310300.11	protein_coding		3167		chr7	TogoVar
LRFN5_chr14_41601876_41909549	41664755	ACAAAAAT others(6): Show ACAAAAATGATTAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0212 a0001c0001t0001g0212	1	280	0.0036	-13	c.-19 others(34): Show c.-197+56194_-197+56206delCAAAAATGATTAT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5			chr14	TogoVar
LRFN5_chr14_41601876_41909549	41672723	CTGGGATT others(6): Show CTGGGATTTGTGGA	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01943.hp1 HG02486.hp2 others(1): Show HG01106.hp2 HG01943.hp1 HG02486.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0025 others(1): Show a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0025 a0001c0002t0002g0009	4	280	0.0143	-13	c.-19 others(34): Show c.-197+64166_-197+64178delATTTGTGGATGGG	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41709082	ACCAACTG others(6): Show ACCAACTGTTTCTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG00738.hp1 others(32): Show HG00140.hp2 HG00639.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01106.hp2 HG01192.hp2 HG01261.hp1 HG01346.hp2 HG01361.hp2 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG02004.hp1 HG02109.hp1 HG02257.hp1 HG02300.hp1 HG02602.hp2 HG02809.hp2 HG02895.hp1 HG03195.hp2 HG03225.hp2 HG03471.hp1 HG03491.hp1 HG03579.hp2 HG03688.hp2 HG03831.hp1 HG03942.hp2 HG04115.hp2 HG04199.hp2 NA18940.hp2 NA18971.hp1 NA18980.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004	a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0002g0008 others(32): Show a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0031 a0001c0001t0002g0225 a0001c0001t0004g0033 a0001c0001t0004g0034 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0004g0223 a0001c0001t0005g0001 a0001c0002t0001g0067 a0001c0002t0001g0182 a0001c0002t0002g0006 a0001c0002t0002g0009 a0001c0002t0002g0010 a0001c0002t0002g0011 a0001c0002t0002g0015 a0001c0002t0002g0016 a0001c0002t0002g0017 a0001c0002t0002g0019 a0001c0002t0002g0020 a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0023 a0001c0002t0002g0024 a0001c0002t0002g0026 a0001c0002t0002g0029 a0001c0002t0002g0030 a0001c0002t0002g0032 a0001c0002t0004g0224	35	280	0.1250	-13	c.-19 others(34): Show c.-196-57768_-196-57756delACTGTTTCTTCCA	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41895834	GAACCATT others(6): Show GAACCATTCTAAGA	G G	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0070 a0001c0001t0002g0070	1	280	0.0036	-13	c.209 others(32): Show c.2099-3080_2099-3068delCCATTCTAAGAAA	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRGUK_chr7_134122340_134269595	134221742	GACTTTTA others(6): Show GACTTTTATTTTAA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0076 a0001c0003t0004g0076	1	220	0.0046	-13	c.184 others(28): Show c.1844-31_1844-19delTATTTTAAACTTT	LRGUK	ENSG00000155530.4	transcript	ENST00000285928.3	protein_coding	15/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
LRIT2_chr10_84215571_84230544	84220205	ATTGGTGT others(6): Show ATTGGTGTGAAGCT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp1 HG02896.hp2 HG02922.hp2 others(2): Show HG02630.hp1 HG02896.hp2 HG02922.hp2 NA19043.hp2 NA21309.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	5	418	0.0120	-13	c.17 others(24): Show c.1702_*1714delAGCTTCACACCAA	LRIT2	ENSG00000204033.10	transcript	ENST00000372113.7	protein_coding		365		chr10	TogoVar
LRIT3_chr4_109843107_109877315	109850401	TCCTTCCT others(6): Show TCCTTCCTTCCTTC	T T	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0020 a0002c0001t0020	a0002c0001t0020g0301 a0002c0001t0020g0301	1	332	0.0030	-13	c.117 others(30): Show c.117-1101_117-1089delCTTCCTTCCTTCC	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRMDA_chr10_75426624_76565168	75692218	AAATATAT others(6): Show AAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0020 a0001c0002t0006g0020	1	46	0.0217	-13	c.131 others(34): Show c.131+253726_131+253738delATATATATATATA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76077992	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0031	1	46	0.0217	-13	c.516 others(32): Show c.516+19233_516+19245delTTTTTTTTTTTTT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76264406	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	46	0.0217	-13	c.517 others(32): Show c.517-59956_517-59944delAAAAAAAAAAAAA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76376865	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0004 a0001c0002t0003g0004	1	46	0.0217	-13	c.601 others(32): Show c.601+52406_601+52418delTTTTTTTTTTTTT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76433642	GGGAAACA others(6): Show GGGAAACAGAAATA	G G	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0009 a0001c0001t0006g0009	1	46	0.0217	-13	c.601 others(34): Show c.601+109160_601+109172delAAACAGAAATAGG	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149816634	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02559.hp2 HG02572.hp2 others(5): Show HG02109.hp1 HG02559.hp2 HG02572.hp2 HG02723.hp1 HG03130.hp2 HG03139.hp2 NA18970.hp1 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0195 a0001c0001t0001g0264 a0001c0001t0003g0012 others(3): Show a0001c0001t0001g0195 a0001c0001t0001g0264 a0001c0001t0003g0012 a0001c0001t0003g0013 a0001c0001t0003g0230 a0001c0001t0003g0231	8	334	0.0240	-13	c.39 others(24): Show c.3902_*3914delAAAAAAAAAAAAA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding		2122		chr6	TogoVar
LRP12_chr8_104484236_104594258	104504171	GCTTATAA others(6): Show GCTTATAATATTCT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02486.hp1 HG03041.hp1 others(3): Show HG01884.hp1 HG02486.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 NA18522.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0012 a0002c0004t0012	a0002c0004t0012g0016 a0002c0004t0012g0017 a0002c0004t0012g0018 others(3): Show a0002c0004t0012g0016 a0002c0004t0012g0017 a0002c0004t0012g0018 a0002c0004t0012g0019 a0002c0004t0012g0020 a0002c0004t0012g0021	6	318	0.0189	-13	c.273 others(30): Show c.273-4665_273-4653delAGAATATTATAAG	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	3/6			chr8	TogoVar

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