Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
MSANTD4_chr11_106002899_106027240	106012105	TAAAAAGA others(6): Show TAAAAAGATCAACA	T T	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA19084.hp2 NA18943.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	2	384	0.0052	-13	c.-15 others(32): Show c.-150-1051_-150-1039delTGTTGATCTTTTT	MSANTD4	ENSG00000170903.12	transcript	ENST00000301919.9	protein_coding	1/2			chr11	TogoVar
MSH2_chr2_47398156_47488223	47413548	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01256.hp1 HG01258.hp1 others(6): Show HG00099.hp2 HG01256.hp1 HG01258.hp1 HG01358.hp1 HG02735.hp1 HG03669.hp1 HG03710.hp1 HG03834.hp2 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0023 others(6): Show a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0042 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0098	9	370	0.0243	-13	c.793 others(28): Show c.793-700_793-688delTTTTTTTTTTTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47414420	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02630.hp2 NA19240.hp1 HG02559.hp2 HG02630.hp2 NA19240.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0101 a0001c0007t0001g0102 a0001c0007t0001g0103 a0001c0007t0001g0101 a0001c0007t0001g0102 a0001c0007t0001g0103	3	370	0.0081	-13	c.942 others(26): Show c.942+17_942+29delAAAAAAAAAAAAA	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47447165	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0150 a0001c0001t0001g0150	1	370	0.0027	-13	c.138 others(32): Show c.1386+1525_1386+1537delTTTTTTTTTTTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47449018	AAAAAAAA others(6): Show AAAAAAAAACAAAC	A A	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	370	0.0027	-13	c.138 others(32): Show c.1386+3370_1386+3382delCAAACAAAAAAAA	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47451278	TTACATGG others(6): Show TTACATGGTGTCAG	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00597.hp2 HG00621.hp2 others(35): Show HG00558.hp1 HG00597.hp2 HG00621.hp2 HG01071.hp2 HG01106.hp1 HG01106.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02027.hp1 HG02071.hp2 HG02129.hp1 HG02273.hp2 HG02738.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 NA18940.hp2 NA18945.hp2 NA18955.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp2 NA18969.hp2 NA18973.hp2 NA19004.hp2 NA19007.hp2 NA19010.hp2 NA19012.hp1 NA19056.hp1 NA19056.hp2 NA19067.hp1 NA19070.hp1	a0001 a0010 a0001 a0010	a0001c0001 a0001c0009 a0010c0016 a0001c0001 a0001c0009 a0010c0016	a0001c0001t0001 a0001c0009t0001 a0010c0016t0001 a0001c0001t0001 a0001c0009t0001 a0010c0016t0001	a0001c0001t0001g0119 a0001c0001t0001g0129 a0001c0001t0001g0130 others(35): Show a0001c0001t0001g0119 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0200 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0246 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0300 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0009t0001g0274 a0001c0009t0001g0275 a0010c0016t0001g0168	38	370	0.1027	-13	c.138 others(32): Show c.1386+5622_1386+5634delTACATGGTGTCAG	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15			chr2	TogoVar
MSH2_chr2_47398156_47488223	47461737	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02895.hp2 NA19067.hp1 HG02895.hp2 NA19067.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0200 a0002c0003t0001g0106 a0001c0001t0001g0200 a0002c0003t0001g0106	2	370	0.0054	-13	c.138 others(32): Show c.1387-1275_1387-1263delTTTTTTTTTTTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH3_chr5_80649652_80881815	80748720	ACACACAC others(6): Show ACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01496.hp1 NA18953.hp1 HG01496.hp1 NA18953.hp1	a0001 a0010 a0001 a0010	a0001c0002 a0010c0015 a0001c0002 a0010c0015	a0001c0002t0001 a0010c0015t0005 a0001c0002t0001 a0010c0015t0005	a0001c0002t0001g0152 a0010c0015t0005g0030 a0001c0002t0001g0152 a0010c0015t0005g0030	2	362	0.0055	-13	c.176 others(32): Show c.1763+4107_1763+4119delACACACACACACC	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80784237	AAAGGGAA others(6): Show AAAGGGAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0025 a0025	a0025c0037 a0025c0037	a0025c0037t0020 a0025c0037t0020	a0025c0037t0020g0222 a0025c0037t0020g0222	1	362	0.0028	-13	c.243 others(32): Show c.2436-3325_2436-3313delGGGAAATAAATAA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	17/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH6_chr2_47778145_47811953	47788900	CTTCTTCC others(6): Show CTTCTTCCTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02300.hp2 HG02976.hp2 HG02300.hp2 HG02976.hp2	a0001 a0001	a0001c0004 a0001c0008 a0001c0004 a0001c0008	a0001c0004t0001 a0001c0008t0001 a0001c0004t0001 a0001c0008t0001	a0001c0004t0001g0350 a0001c0008t0001g0212 a0001c0004t0001g0350 a0001c0008t0001g0212	2	390	0.0051	-13	c.261 others(30): Show c.261-2024_261-2012delCTTCCTTTTTTTT	MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH6_chr2_47778145_47811953	47788906	CCTTTTTT others(6): Show CCTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0208 a0002c0002t0001g0208	1	390	0.0026	-13	c.261 others(30): Show c.261-2020_261-2008delCTTTTTTTTTTTT	MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	1/9			chr2	TogoVar
MSH6_chr2_47778145_47811953	47793318	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG02615.hp2 HG02723.hp1 others(7): Show HG01346.hp2 HG02615.hp2 HG02723.hp1 HG02809.hp1 HG03139.hp1 HG03471.hp1 HG03490.hp2 HG03492.hp1 HG04115.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0213 others(5): Show a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218	10	390	0.0256	-13	c.457 others(30): Show c.457+2212_457+2224delAAAAAAAAAAAAA	MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSI2_chr17_57251523_57689689	57295992	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 NA20300.hp2 HG02055.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0085 a0001c0001t0046 a0001c0001t0085	a0001c0001t0046g0061 a0001c0001t0085g0143 a0001c0001t0046g0061 a0001c0001t0085g0143	2	168	0.0119	-13	c.312 others(32): Show c.312+33822_312+33834delTTTTTTTTTTTTT	MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57471277	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0083 a0001c0001t0083	a0001c0001t0083g0058 a0001c0001t0083g0058	1	168	0.0060	-13	c.406 others(32): Show c.406-58380_406-58368delTTTTTTTTTTTTT	MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57523151	AATTCTCC others(6): Show AATTCTCCTGCCTC	A A	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0025	1	168	0.0060	-13	c.406 others(30): Show c.406-6523_406-6511delTTCTCCTGCCTCA	MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
MSL1_chr17_40116971_40141917	40118742	TATATATA others(6): Show TATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0026 a0001c0002t0008g0026	1	356	0.0028	-13	c.-38 others(24): Show c.-3870_-3858delATATATATATATA	MSL1	ENSG00000188895.12	transcript	ENST00000398532.9	protein_coding		3228		chr17	TogoVar
MSL1_chr17_40116971_40141917	40132944	GAAAGATT others(6): Show GAAAGATTTTACGT	G G	intron_variant intron_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	356	0.0028	-13	c.148 others(28): Show c.1489-97_1489-85delAAAGATTTTACGT	MSL1	ENSG00000188895.12	transcript	ENST00000398532.9	protein_coding	5/8			chr17	TogoVar
MSL2_chr3_136143917_136201335	136188325	TCAGGAGA others(6): Show TCAGGAGACTGAGG	T T	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02965.hp1 HG02280.hp2 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0180 a0001c0001t0015g0181 a0001c0001t0015g0180 a0001c0001t0015g0181	2	310	0.0065	-13	c.142 others(30): Show c.142+6634_142+6646delCCTCAGTCTCCTG	MSL2	ENSG00000174579.5	transcript	ENST00000309993.3	protein_coding	1/1			chr3	TogoVar
MSL2_chr3_136143917_136201335	136189108	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03098.hp2 HG02572.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0161 a0001c0001t0009g0169 a0001c0001t0001g0161 a0001c0001t0009g0169	2	310	0.0065	-13	c.142 others(30): Show c.142+5851_142+5863delTTTTTTTTTTTTT	MSL2	ENSG00000174579.5	transcript	ENST00000309993.3	protein_coding	1/1			chr3	TogoVar
MSL3_chrX_11753237_11780772	11773394	TTAAGGAG others(6): Show TTAAGGAGTATCTC	T T	intron_variant intron_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0003 a0004c0006t0003	a0004c0006t0003g0051 a0004c0006t0003g0051	1	297	0.0034	-13	c.146 others(30): Show c.1466+691_1466+703delAAGGAGTATCTCT	MSL3	ENSG00000005302.19	transcript	ENST00000312196.10	protein_coding	12/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
MSLN_chr16_755734_773862	767654	GGAGGGGG others(6): Show GGAGGGGGGAGCGT	G G	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01081.hp1 NA19063.hp1 HG00544.hp2 HG01081.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0136 a0001c0001t0001g0195 a0001c0001t0001g0090 a0001c0001t0001g0136 a0001c0001t0001g0195	3	388	0.0077	-13	c.159 others(30): Show c.1596+186_1596+198delAGGGGGGAGCGTG	MSLN	ENSG00000102854.16	transcript	ENST00000545450.7	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr16	TogoVar
MSLN_chr16_755734_773862	767823	GTGGGGGG others(6): Show GTGGGGGGGGCGCA	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03516.hp1 HG02976.hp1 HG03516.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0218 a0002c0003t0004g0219 a0002c0003t0004g0218 a0002c0003t0004g0219	2	388	0.0052	-13	c.159 others(30): Show c.1596+362_1596+374delGCGCATGGGGGGG	MSLN	ENSG00000102854.16	transcript	ENST00000545450.7	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr16	TogoVar
MSLN_chr16_755734_773862	767908	GGGGGGCG others(6): Show GGGGGGCGCGTGGA	G G	intron_variant intron_variant	MODIFIER	HG01978.hp2 NA18980.hp1 HG01978.hp2 NA18980.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0005 a0002c0002 a0005c0005	a0002c0002t0002 a0005c0005t0001 a0002c0002t0002 a0005c0005t0001	a0002c0002t0002g0333 a0005c0005t0001g0039 a0002c0002t0002g0333 a0005c0005t0001g0039	2	388	0.0052	-13	c.159 others(30): Show c.1596+445_1597-452delGCGTGGAGGGGGC	MSLN	ENSG00000102854.16	transcript	ENST00000545450.7	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr16	TogoVar
MSLN_chr16_755734_773862	767926	GCACGTGG others(6): Show GCACGTGGAGGGGT	G G	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	388	0.0026	-13	c.159 others(30): Show c.1597-451_1597-439delACGTGGAGGGGTC	MSLN	ENSG00000102854.16	transcript	ENST00000545450.7	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr16	TogoVar
MSLN_chr16_755734_773862	768029	GGGGGGCG others(6): Show GGGGGGCGCGTGGA	G G	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01074.hp2 HG01993.hp1 others(14): Show HG00558.hp1 HG01074.hp2 HG01993.hp1 HG02071.hp2 HG02080.hp2 HG03654.hp2 HG03669.hp1 HG03927.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 NA18950.hp1 NA18969.hp2 NA19055.hp1 NA19063.hp2 NA19088.hp2	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0005 a0016 a0027 a0030	a0001c0001 a0001c0022 a0002c0002 others(7): Show a0001c0001 a0001c0022 a0002c0002 a0004c0006 a0004c0021 a0005c0005 a0005c0044 a0016c0028 a0027c0033 a0030c0032	a0001c0001t0001 a0001c0022t0001 a0002c0002t0002 others(7): Show a0001c0001t0001 a0001c0022t0001 a0002c0002t0002 a0004c0006t0001 a0004c0021t0001 a0005c0005t0001 a0005c0044t0001 a0016c0028t0001 a0027c0033t0001 a0030c0032t0001	a0001c0001t0001g0279 a0001c0022t0001g0178 a0002c0002t0002g0320 others(14): Show a0001c0001t0001g0279 a0001c0022t0001g0178 a0002c0002t0002g0320 a0004c0006t0001g0181 a0004c0006t0001g0224 a0004c0006t0001g0240 a0004c0006t0001g0251 a0004c0006t0001g0261 a0004c0006t0001g0265 a0004c0006t0001g0266 a0004c0021t0001g0298 a0004c0021t0001g0345 a0005c0005t0001g0041 a0005c0044t0001g0040 a0016c0028t0001g0187 a0027c0033t0001g0342 a0030c0032t0001g0177	17	388	0.0438	-13	c.159 others(30): Show c.1597-334_1597-322delGGGCGCGTGGAGG	MSLN	ENSG00000102854.16	transcript	ENST00000545450.7	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr16	TogoVar
MSN_chrX_65662654_65746931	65699748	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0015 a0001c0001t0012g0015	1	170	0.0059	-13	c.13- others(30): Show c.13-17060_13-17048delAAAAAAAAAAAAA	MSN	ENSG00000147065.18	transcript	ENST00000360270.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
MSR1_chr8_16102881_16197651	16139773	AAATATAT others(6): Show AAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA18941.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0006 a0001c0001t0002g0006	1	330	0.0030	-13	c.103 others(32): Show c.1033+3772_1033+3784delATATATATATATT	MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9			chr8	TogoVar
MSR1_chr8_16102881_16197651	16139775	ATATATAT others(6): Show ATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01256.hp1 NA18955.hp1 HG01256.hp1 NA18955.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0035 a0001c0001t0001 a0001c0001t0035	a0001c0001t0001g0007 a0001c0001t0035g0175 a0001c0001t0001g0007 a0001c0001t0035g0175	2	330	0.0061	-13	c.103 others(32): Show c.1033+3770_1033+3782delATATATATATATA	MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9			chr8	TogoVar
MSRA_chr8_10049292_10433891	10067874	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp2 HG02451.hp1 others(15): Show HG01891.hp1 HG01891.hp2 HG02451.hp1 HG02572.hp2 HG02622.hp1 HG02738.hp2 HG02922.hp2 HG03041.hp2 HG03130.hp1 HG03225.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG06807.hp1 NA18522.hp2 NA19043.hp2 NA20129.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0016 a0001c0001t0018 a0001c0002t0002	a0001c0001t0001g0011 a0001c0001t0001g0070 a0001c0001t0003g0060 others(15): Show a0001c0001t0001g0011 a0001c0001t0001g0070 a0001c0001t0003g0060 a0001c0001t0003g0078 a0001c0001t0003g0080 a0001c0001t0003g0082 a0001c0001t0004g0059 a0001c0001t0004g0065 a0001c0001t0004g0066 a0001c0001t0004g0071 a0001c0001t0004g0079 a0001c0001t0004g0081 a0001c0001t0004g0085 a0001c0001t0009g0064 a0001c0001t0016g0073 a0001c0001t0018g0077 a0001c0002t0002g0072 a0001c0002t0002g0074	18	286	0.0629	-13	c.142 others(32): Show c.142+13232_142+13244delTTTTTTTTTTTTT	MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
MSRA_chr8_10049292_10433891	10074058	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02572.hp1 HG03540.hp1 others(5): Show HG00423.hp2 HG02572.hp1 HG03540.hp1 NA18946.hp1 NA18960.hp2 NA18977.hp1 NA19011.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 a0001c0001t0001 a0001c0001t0003 a0001c0002t0002	a0001c0001t0001g0010 a0001c0001t0003g0053 a0001c0001t0003g0250 others(5): Show a0001c0001t0001g0010 a0001c0001t0003g0053 a0001c0001t0003g0250 a0001c0001t0003g0254 a0001c0002t0002g0255 a0001c0002t0002g0256 a0001c0002t0002g0275 a0001c0002t0002g0277	8	286	0.0280	-13	c.142 others(32): Show c.142+19428_142+19440delTTTTTTTTTTTTT	MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
MSRA_chr8_10049292_10433891	10213432	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0176 a0001c0001t0003g0176	1	286	0.0035	-13	c.211 others(30): Show c.211+5543_211+5555delTTTTTTTTTTTTT	MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
MSRA_chr8_10049292_10433891	10358565	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02683.hp1 NA18998.hp2 HG00558.hp2 HG02683.hp1 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0007 a0001c0001t0001g0229 a0001c0001t0006g0222 a0001c0001t0001g0007 a0001c0001t0001g0229 a0001c0001t0006g0222	3	286	0.0105	-13	c.543 others(32): Show c.543+38609_543+38621delTTTTTTTTTTTTT	MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
MSRB3_chr12_65273683_65471907	65396695	AAAAAAAA others(6): Show AAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00735.hp1 HG00738.hp2 others(18): Show HG00642.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01169.hp2 HG01192.hp2 HG01243.hp2 HG01515.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02148.hp2 HG02258.hp1 HG03540.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0011 a0001c0001t0003 a0001c0001t0011	a0001c0001t0003g0001 a0001c0001t0003g0052 a0001c0001t0003g0062 others(17): Show a0001c0001t0003g0001 a0001c0001t0003g0052 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0065 a0001c0001t0003g0070 a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0107 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0003g0112 a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0138 a0001c0001t0003g0153 a0001c0001t0011g0060	21	312	0.0673	-13	c.292 others(32): Show c.292+27673_292+27685delAAAAAAAAAGAAA	MSRB3	ENSG00000174099.12	transcript	ENST00000308259.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr12	TogoVar
MSTO1_chr1_155605218_155619951	155606293	AAGTGATC others(6): Show AAGTGATCCGCCTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG02109.hp1 HG02257.hp2 others(5): Show HG01891.hp1 HG02109.hp1 HG02257.hp2 HG02451.hp1 HG02630.hp2 HG02895.hp2 HG02897.hp1 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0003 a0001c0001t0001 a0003c0004t0003	a0001c0001t0001g0023 a0003c0004t0003g0001 a0001c0001t0001g0023 a0003c0004t0003g0001	8	398	0.0201	-13	c.-39 others(24): Show c.-3955_-3943delAGTGATCCGCCTG	MSTO1	ENSG00000125459.18	transcript	ENST00000245564.8	protein_coding		3924		chr1	TogoVar
MSX1_chr4_4854665_4868936	4863552	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01071.hp1 HG01433.hp1 HG01515.hp1 others(18): Show HG01071.hp1 HG01433.hp1 HG01515.hp1 HG02055.hp1 HG02109.hp2 HG02257.hp2 HG02622.hp1 HG02647.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03540.hp1 NA18906.hp1 NA19030.hp1 NA19043.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0008 a0001c0001t0043 a0001c0001t0070 others(1): Show a0001c0001t0008 a0001c0001t0043 a0001c0001t0070 a0006c0006t0031	a0001c0001t0008g0006 a0001c0001t0043g0010 a0001c0001t0070g0006 others(1): Show a0001c0001t0008g0006 a0001c0001t0043g0010 a0001c0001t0070g0006 a0006c0006t0031g0003	21	440	0.0477	-13	c.43 others(22): Show c.433_*445delAAAAAAAAAAAAA	MSX1	ENSG00000163132.8	transcript	ENST00000382723.5	protein_coding	2/2	433	INFO_REALIGN_3_PRIME	chr4	TogoVar
MT1B_chr16_56646886_56658204	56657136	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG02886.hp1 HG02895.hp2 others(2): Show HG01109.hp2 HG02886.hp1 HG02895.hp2 HG02965.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0003 a0001c0001t0001g0005	5	456	0.0110	-13	c.40 others(24): Show c.4072_*4084delTTTTTTTTTTTTT	MT1B	ENSG00000169688.11	transcript	ENST00000334346.3	protein_coding		3933		chr16	TogoVar
MT1E_chr16_56620781_56632112	56627853	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp2 HG03041.hp1 HG03540.hp1 HG02027.hp2 HG03041.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0005g0008 a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0005g0008	3	458	0.0066	-13	c.10 others(24): Show c.1033_*1045delAAAAAAAAAAAAA	MT1E	ENSG00000169715.15	transcript	ENST00000330439.7	protein_coding		742		chr16	TogoVar
MT1F_chr16_56652959_56664303	56657136	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG02886.hp1 HG02895.hp2 others(2): Show HG01109.hp2 HG02886.hp1 HG02895.hp2 HG02965.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	5	462	0.0108	-13	c.-92 others(22): Show c.-922_-910delTTTTTTTTTTTTT	MT1F	ENSG00000198417.7	transcript	ENST00000334350.7	protein_coding		822		chr16	TogoVar
MT1M_chr16_56627659_56638981	56627853	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02027.hp1 HG03540.hp1 HG02027.hp1 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0003 a0002c0002t0002g0002 a0001c0001t0001g0003 a0002c0002t0002g0002	2	446	0.0045	-13	c.-48 others(24): Show c.-4878_-4866delAAAAAAAAAAAAA	MT1M	ENSG00000205364.4	transcript	ENST00000379818.4	protein_coding		4805		chr16	TogoVar
MT4_chr16_56560073_56573957	56561701	TTTTTTTT others(6): Show TTTTTTTTTTTTTA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 HG00741.hp2 HG01081.hp1 others(13): Show HG00741.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp1 HG01168.hp1 HG01256.hp2 HG01981.hp2 HG02723.hp1 HG02735.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG03098.hp2 HG06807.hp1 NA20129.hp2 NA20752.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 others(13): Show a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0198 a0001c0001t0001g0246 a0001c0001t0001g0260 a0001c0001t0001g0277 a0001c0001t0001g0296 a0003c0003t0001g0190 a0003c0003t0001g0194 a0003c0003t0001g0195 a0003c0003t0001g0196 a0003c0003t0001g0197 a0003c0003t0001g0199 a0003c0003t0001g0200 a0003c0003t0001g0201	16	428	0.0374	-13	c.-34 others(24): Show c.-3427_-3415delTTTTTTTTTTTTA	MT4	ENSG00000102891.4	transcript	ENST00000219162.4	protein_coding		3371		chr16	TogoVar
MT4_chr16_56560073_56573957	56566806	GAAAGAAA others(6): Show GAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00639.hp1 others(13): Show HG00099.hp1 HG00280.hp1 HG00639.hp1 HG00642.hp2 HG01192.hp1 HG01256.hp2 HG03834.hp1 HG04199.hp2 HG06807.hp1 NA18962.hp1 NA18965.hp1 NA18980.hp2 NA18983.hp1 NA18992.hp1 NA19003.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0250 a0001c0001t0001g0260 others(12): Show a0001c0001t0001g0019 a0001c0001t0001g0250 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0282 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0296 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0339 a0001c0001t0001g0340 a0001c0001t0001g0345	16	428	0.0374	-13	c.32- others(26): Show c.32-929_32-917delAGAAAGAAAGAAA	MT4	ENSG00000102891.4	transcript	ENST00000219162.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr16	TogoVar
MT4_chr16_56560073_56573957	56568223	GAAAGAAA others(6): Show GAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0362 a0001c0001t0001g0362	1	428	0.0023	-13	c.97+ others(26): Show c.97+410_97+422delAGAAAGAAAGAAA	MT4	ENSG00000102891.4	transcript	ENST00000219162.4	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr16	TogoVar
MT4_chr16_56560073_56573957	56568231	GAAAGAAA others(6): Show GAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0191 a0001c0001t0001g0191	1	428	0.0023	-13	c.97+ others(26): Show c.97+418_97+430delAGAAAGAAAGAAA	MT4	ENSG00000102891.4	transcript	ENST00000219162.4	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr16	TogoVar
MTBP_chr8_120440419_120528636	120457832	TTGAGGCA others(6): Show TTGAGGCAGGAGAA	T T	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03486.hp2 HG02572.hp1 HG03486.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0035 a0001c0009t0001g0036 a0001c0009t0001g0035 a0001c0009t0001g0036	2	352	0.0057	-13	c.747 others(30): Show c.747+1178_747+1190delAGGCAGGAGAATG	MTBP	ENSG00000172167.8	transcript	ENST00000305949.6	protein_coding	7/21		INFO_REALIGN_3_PRIME	chr8	TogoVar
MTCH2_chr11_47612317_47647559	47615031	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	370	0.0027	-13	c.37 others(24): Show c.3789_*3801delAAAAAAAAAAAAA	MTCH2	ENSG00000109919.10	transcript	ENST00000302503.8	protein_coding		2285		chr11	TogoVar
MTDH_chr8_97639184_97735260	97677180	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG03041.hp2 HG03491.hp1 others(3): Show HG02027.hp2 HG03041.hp2 HG03491.hp1 HG03492.hp2 HG04204.hp2 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0032 a0001c0001t0001 a0001c0001t0002 a0001c0001t0032	a0001c0001t0001g0024 a0001c0001t0001g0051 a0001c0001t0001g0090 others(3): Show a0001c0001t0001g0024 a0001c0001t0001g0051 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0002g0350 a0001c0001t0032g0093	6	370	0.0162	-13	c.484 others(30): Show c.484-9469_484-9457delAAAAAAAAAAAAA	MTDH	ENSG00000147649.10	transcript	ENST00000336273.8	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr8	TogoVar
MTDH_chr8_97639184_97735260	97682259	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0084 a0001c0001t0084	a0001c0001t0084g0327 a0001c0001t0084g0327	1	370	0.0027	-13	c.484 others(30): Show c.484-4408_484-4396delATATATATATATA	MTDH	ENSG00000147649.10	transcript	ENST00000336273.8	protein_coding	2/11			chr8	TogoVar
MTDH_chr8_97639184_97735260	97682265	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG03491.hp2 HG00741.hp1 HG03491.hp2	a0004 a0007 a0004 a0007	a0004c0010 a0007c0012 a0004c0010 a0007c0012	a0004c0010t0092 a0007c0012t0015 a0004c0010t0092 a0007c0012t0015	a0004c0010t0092g0247 a0007c0012t0015g0246 a0004c0010t0092g0247 a0007c0012t0015g0246	2	370	0.0054	-13	c.484 others(30): Show c.484-4402_484-4390delATATATATATATA	MTDH	ENSG00000147649.10	transcript	ENST00000336273.8	protein_coding	2/11			chr8	TogoVar
MTDH_chr8_97639184_97735260	97682267	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG02897.hp1 NA19007.hp1 HG00140.hp1 HG02897.hp1 NA19007.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0002c0003t0013 a0001c0001t0001 a0001c0001t0002 a0002c0003t0013	a0001c0001t0001g0057 a0001c0001t0002g0322 a0002c0003t0013g0129 a0001c0001t0001g0057 a0001c0001t0002g0322 a0002c0003t0013g0129	3	370	0.0081	-13	c.484 others(30): Show c.484-4400_484-4388delATATATATATATA	MTDH	ENSG00000147649.10	transcript	ENST00000336273.8	protein_coding	2/11			chr8	TogoVar
MTDH_chr8_97639184_97735260	97682270	ATATATAT others(6): Show ATATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0013 a0002c0003t0013	a0002c0003t0013g0130 a0002c0003t0013g0130	1	370	0.0027	-13	c.484 others(30): Show c.484-4396_484-4384delATATATATATTTT	MTDH	ENSG00000147649.10	transcript	ENST00000336273.8	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr8	TogoVar

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