Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
NCAM1_chr11_112956420_113283436	113056012	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA18990.hp2 NA18990.hp1 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0107 a0001c0001t0002g0238 a0001c0001t0001g0107 a0001c0001t0002g0238	2	242	0.0083	-13	c.52+ others(30): Show c.52+94350_52+94362delTATATATATATAA	NCAM1	ENSG00000149294.18	transcript	ENST00000316851.12	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
NCAM1_chr11_112956420_113283436	113145850	GGAGGCAG others(6): Show GGAGGCAGTTTCTT	G G	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0089	1	242	0.0041	-13	c.53- others(30): Show c.53-56522_53-56510delGTTTCTTGAGGCA	NCAM1	ENSG00000149294.18	transcript	ENST00000316851.12	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
NCAM1_chr11_112956420_113283436	113210774	AAACACAC others(6): Show AAACACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0105 a0001c0001t0012g0105	1	242	0.0041	-13	c.916 others(30): Show c.916+2774_916+2786delACACACACACACA	NCAM1	ENSG00000149294.18	transcript	ENST00000316851.12	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
NCAM1_chr11_112956420_113283436	113281898	GATCACCA others(6): Show GATCACCATGTGAT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 NA20129.hp1 HG01070.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0084 a0001c0001t0008g0232 a0001c0001t0008g0084 a0001c0001t0008g0232	2	242	0.0083	-13	c.65 others(24): Show c.6512_*6524delATCACCATGTGAT	NCAM1	ENSG00000149294.18	transcript	ENST00000316851.12	protein_coding		3463		chr11	TogoVar
NCAM2_chr21_20993409_21548329	21032949	TTTTTTTT others(6): Show TTTTTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00733.hp2 HG01361.hp2 others(7): Show HG00280.hp1 HG00733.hp2 HG01361.hp2 HG01934.hp1 HG01975.hp1 HG02293.hp2 HG03139.hp2 HG03540.hp2 HG03831.hp2 HG03927.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0006 a0001c0001t0030 others(5): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0030 a0002c0002t0001 a0002c0002t0007 a0002c0002t0015 a0002c0002t0035 a0002c0002t0037	a0001c0001t0003g0113 a0001c0001t0003g0120 a0001c0001t0006g0067 others(7): Show a0001c0001t0003g0113 a0001c0001t0003g0120 a0001c0001t0006g0067 a0001c0001t0030g0112 a0002c0002t0001g0111 a0002c0002t0001g0114 a0002c0002t0007g0051 a0002c0002t0015g0054 a0002c0002t0035g0052 a0002c0002t0037g0063	10	132	0.0758	-13	c.55+ others(30): Show c.55+34332_55+34344delTTTTTTTTTTTTG	NCAM2	ENSG00000154654.15	transcript	ENST00000400546.6	protein_coding	1/17			chr21	TogoVar
NCAM2_chr21_20993409_21548329	21063210	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG03139.hp1 HG03471.hp2 others(2): Show HG00639.hp2 HG03139.hp1 HG03471.hp2 HG03834.hp2 NA18979.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0002 a0001c0001t0020 a0001c0001t0029 others(2): Show a0001c0001t0002 a0001c0001t0020 a0001c0001t0029 a0001c0004t0036 a0002c0002t0019	a0001c0001t0002g0072 a0001c0001t0020g0131 a0001c0001t0029g0061 others(2): Show a0001c0001t0002g0072 a0001c0001t0020g0131 a0001c0001t0029g0061 a0001c0004t0036g0071 a0002c0002t0019g0034	5	132	0.0379	-13	c.55+ others(30): Show c.55+64608_55+64620delTTTTTTTTTTTTT	NCAM2	ENSG00000154654.15	transcript	ENST00000400546.6	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
NCAM2_chr21_20993409_21548329	21248776	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02572.hp1 HG01891.hp2 HG02572.hp1	a0002 a0003 a0002 a0003	a0002c0003 a0003c0006 a0002c0003 a0003c0006	a0002c0003t0002 a0003c0006t0018 a0002c0003t0002 a0003c0006t0018	a0002c0003t0002g0128 a0003c0006t0018g0016 a0002c0003t0002g0128 a0003c0006t0018g0016	2	132	0.0152	-13	c.56- others(30): Show c.56-31773_56-31761delAAAAAAAAAAAAA	NCAM2	ENSG00000154654.15	transcript	ENST00000400546.6	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
NCAM2_chr21_20993409_21548329	21394469	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00741.hp1 HG01891.hp2 others(11): Show HG00639.hp1 HG00741.hp1 HG01891.hp2 HG01975.hp2 HG02258.hp1 HG02559.hp1 HG02572.hp1 HG02976.hp1 HG03471.hp1 HG03486.hp1 HG03579.hp1 HG06807.hp2 NA18522.hp1 NA20300.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0002c0003 a0002c0008 others(3): Show a0002c0002 a0002c0003 a0002c0008 a0002c0009 a0003c0005 a0003c0006	a0002c0002t0002 a0002c0002t0008 a0002c0002t0033 others(8): Show a0002c0002t0002 a0002c0002t0008 a0002c0002t0033 a0002c0003t0002 a0002c0003t0003 a0002c0003t0017 a0002c0008t0015 a0002c0009t0004 a0003c0005t0005 a0003c0006t0005 a0003c0006t0018	a0002c0002t0002g0047 a0002c0002t0008g0098 a0002c0002t0033g0074 others(11): Show a0002c0002t0002g0047 a0002c0002t0008g0098 a0002c0002t0033g0074 a0002c0003t0002g0128 a0002c0003t0003g0062 a0002c0003t0003g0107 a0002c0003t0017g0091 a0002c0008t0015g0129 a0002c0009t0004g0115 a0003c0005t0005g0006 a0003c0005t0005g0105 a0003c0005t0005g0126 a0003c0006t0005g0065 a0003c0006t0018g0016	14	132	0.1061	-13	c.119 others(34): Show c.1196-15780_1196-15768delTTTTTTTTTTTTT	NCAM2	ENSG00000154654.15	transcript	ENST00000400546.6	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
NCAM2_chr21_20993409_21548329	21415330	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0006 a0002c0003t0006	a0002c0003t0006g0031 a0002c0003t0006g0031	1	132	0.0076	-13	c.138 others(32): Show c.1384-3129_1384-3117delTTTTTTTTTTTTT	NCAM2	ENSG00000154654.15	transcript	ENST00000400546.6	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
NCAN_chr19_19206958_19257233	19210613	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0003 a0003	a0003c0016 a0003c0016	a0003c0016t0005 a0003c0016t0005	a0003c0016t0005g0128 a0003c0016t0005g0128	1	318	0.0031	-13	c.-14 others(24): Show c.-1458_-1446delTTTTTTTTTTTTT	NCAN	ENSG00000130287.14	transcript	ENST00000252575.11	protein_coding		1344		chr19	TogoVar
NCAPD3_chr11_134145113_134228967	134153710	CAGATTCC others(6): Show CAGATTCCCTGAGG	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0179 a0001c0001t0002g0179	1	370	0.0027	-13	c.425 others(30): Show c.4253-360_4253-348delCCTCAGGGAATCT	NCAPD3	ENSG00000151503.14	transcript	ENST00000534548.7	protein_coding	32/34			chr11	TogoVar
NCAPG2_chr7_158626169_158709804	158628505	GGGAGGCT others(6): Show GGGAGGCTGAGACA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp2 HG03209.hp1 HG03486.hp1 others(2): Show HG02717.hp2 HG03209.hp1 HG03486.hp1 NA18522.hp1 NA19240.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0005 a0004c0007t0002 a0001c0001t0005 a0004c0007t0002	a0001c0001t0005g0168 a0001c0001t0005g0214 a0004c0007t0002g0212 others(2): Show a0001c0001t0005g0168 a0001c0001t0005g0214 a0004c0007t0002g0212 a0004c0007t0002g0216 a0004c0007t0002g0217	5	378	0.0132	-13	c.31 others(24): Show c.3148_*3160delTGTCTCAGCCTCC	NCAPG2	ENSG00000146918.20	transcript	ENST00000356309.8	protein_coding		2663		chr7	TogoVar
NCAPG2_chr7_158626169_158709804	158660417	TTTTTTTT others(6): Show TTTTTTTTTTTTTA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02486.hp1 HG03453.hp1 others(1): Show HG01243.hp2 HG02486.hp1 HG03453.hp1 NA19030.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0011c0016 a0001c0001 a0011c0016	a0001c0001t0001 a0011c0016t0001 a0001c0001t0001 a0011c0016t0001	a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 others(1): Show a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0011c0016t0001g0162	4	378	0.0106	-13	c.198 others(32): Show c.1989+1764_1989+1776delTAAAAAAAAAAAA	NCAPG2	ENSG00000146918.20	transcript	ENST00000356309.8	protein_coding	16/27			chr7	TogoVar
NCAPG2_chr7_158626169_158709804	158667329	GCTACTGT others(6): Show GCTACTGTGTCCCT	G G	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0272 a0001c0001t0001g0272	1	378	0.0027	-13	c.148 others(32): Show c.1480-2592_1480-2580delAGGGACACAGTAG	NCAPG2	ENSG00000146918.20	transcript	ENST00000356309.8	protein_coding	13/27			chr7	TogoVar
NCAPG2_chr7_158626169_158709804	158709333	ATAGGAAG others(6): Show ATAGGAAGCTGTAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0083 a0001c0001t0002g0083	1	378	0.0027	-13	c.-46 others(24): Show c.-4662_-4650delATACAGCTTCCTA	NCAPG2	ENSG00000146918.20	transcript	ENST00000356309.8	protein_coding		4530		chr7	TogoVar
NCAPH_chr2_96330766_96382091	96335021	CTATATTT others(6): Show CTATATTTAATGTA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	356	0.0028	-13	c.-80 others(22): Show c.-808_-796delTATATTTAATGTA	NCAPH	ENSG00000121152.10	transcript	ENST00000240423.9	protein_coding		744		chr2	TogoVar
NCBP2_chr3_196930406_196947528	196932728	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00738.hp1 HG01074.hp1 HG00140.hp1 HG00738.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	3	420	0.0071	-13	c.42 others(24): Show c.4270_*4282delAAAAAAAAAAAAA	NCBP2	ENSG00000114503.11	transcript	ENST00000321256.10	protein_coding		2677		chr3	TogoVar
NCCRP1_chr19_39191964_39206884	39199498	CTTTTTTC others(6): Show CTTTTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00408.hp1 others(101): Show HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp2 HG01258.hp2 HG01346.hp1 HG01358.hp1 HG01433.hp1 HG01516.hp2 HG01952.hp1 HG01978.hp1 HG02027.hp2 HG02040.hp1 HG02071.hp2 HG02080.hp1 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02683.hp2 HG02698.hp1 HG02738.hp1 HG03239.hp1 HG03490.hp2 HG03492.hp2 HG03688.hp1 HG03834.hp1 HG04228.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18939.hp2 NA18940.hp2 NA18942.hp1 NA18945.hp1 NA18947.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18964.hp1 NA18966.hp1 NA18968.hp2 NA18971.hp2 NA18973.hp2 NA18981.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA18995.hp2 NA18999.hp2 NA19009.hp1 NA19010.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp2 NA19074.hp2 NA19079.hp1 NA19080.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19088.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0004t0002	a0001c0001t0001g0002 a0001c0001t0002g0002 a0001c0001t0002g0011 others(8): Show a0001c0001t0001g0002 a0001c0001t0002g0002 a0001c0001t0002g0011 a0001c0001t0002g0013 a0001c0001t0002g0045 a0001c0001t0002g0049 a0001c0001t0003g0002 a0001c0001t0014g0002 a0001c0001t0015g0011 a0001c0001t0017g0002 a0001c0004t0002g0002	104	380	0.2737	-13	c.548 others(28): Show c.548+240_548+252delCTTTCTTTTTTTT	NCCRP1	ENSG00000188505.5	transcript	ENST00000339852.5	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr19	TogoVar
NCEH1_chr3_172625249_172716067	172677807	AGTCCCAG others(6): Show AGTCCCAGCTACTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(191): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01109.hp1 HG01168.hp1 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01978.hp1 HG01978.hp2 HG02027.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02922.hp1 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18944.hp1 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18955.hp2 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18971.hp1 NA18971.hp2 NA18977.hp1 NA18977.hp2 NA18981.hp1 NA18984.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18999.hp1 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20300.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0019 a0001c0001t0021 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0031 a0001c0001t0033 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0002c0002t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0009 a0002c0002t0016 a0003c0003t0009	a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0172 others(191): Show a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0181 a0001c0001t0001g0185 a0001c0001t0001g0193 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0239 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0248 a0001c0001t0001g0250 a0001c0001t0001g0253 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0264 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0272 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0305 a0001c0001t0001g0307 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0330 a0001c0001t0002g0022 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0002g0042 a0001c0001t0002g0051 a0001c0001t0002g0055 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0073 a0001c0001t0002g0076 a0001c0001t0002g0099 a0001c0001t0002g0120 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0132 a0001c0001t0002g0144 a0001c0001t0002g0147 a0001c0001t0002g0162 a0001c0001t0002g0164 a0001c0001t0003g0173 a0001c0001t0003g0179 a0001c0001t0003g0191 a0001c0001t0003g0194 a0001c0001t0003g0197 a0001c0001t0003g0240 a0001c0001t0003g0254 a0001c0001t0003g0271 a0001c0001t0003g0288 a0001c0001t0003g0293 a0001c0001t0003g0320 a0001c0001t0003g0329 a0001c0001t0004g0170 a0001c0001t0004g0176 a0001c0001t0004g0224 a0001c0001t0004g0225 a0001c0001t0004g0233 a0001c0001t0004g0234 a0001c0001t0004g0267 a0001c0001t0004g0279 a0001c0001t0004g0280 a0001c0001t0004g0301 a0001c0001t0004g0306 a0001c0001t0004g0308 a0001c0001t0004g0312 a0001c0001t0004g0314 a0001c0001t0004g0317 a0001c0001t0004g0318 a0001c0001t0004g0319 a0001c0001t0005g0005 a0001c0001t0005g0011 a0001c0001t0005g0012 a0001c0001t0005g0015 a0001c0001t0005g0016 a0001c0001t0005g0031 a0001c0001t0005g0036 a0001c0001t0005g0103 a0001c0001t0005g0108 a0001c0001t0005g0112 a0001c0001t0005g0118 a0001c0001t0005g0119 a0001c0001t0005g0134 a0001c0001t0005g0152 a0001c0001t0005g0153 a0001c0001t0006g0190 a0001c0001t0006g0206 a0001c0001t0006g0211 a0001c0001t0006g0236 a0001c0001t0006g0270 a0001c0001t0006g0291 a0001c0001t0006g0323 a0001c0001t0007g0007 a0001c0001t0007g0038 a0001c0001t0007g0039 a0001c0001t0007g0088 a0001c0001t0007g0116 a0001c0001t0007g0140 a0001c0001t0007g0145 a0001c0001t0007g0155 a0001c0001t0007g0158 a0001c0001t0007g0163 a0001c0001t0008g0019 a0001c0001t0008g0020 a0001c0001t0008g0047 a0001c0001t0008g0060 a0001c0001t0008g0062 a0001c0001t0008g0072 a0001c0001t0008g0110 a0001c0001t0008g0159 a0001c0001t0009g0026 a0001c0001t0009g0058 a0001c0001t0009g0065 a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0001t0010g0083 a0001c0001t0011g0014 a0001c0001t0011g0045 a0001c0001t0011g0094 a0001c0001t0011g0095 a0001c0001t0012g0044 a0001c0001t0013g0192 a0001c0001t0013g0249 a0001c0001t0013g0251 a0001c0001t0013g0292 a0001c0001t0014g0025 a0001c0001t0014g0077 a0001c0001t0014g0089 a0001c0001t0015g0066 a0001c0001t0017g0049 a0001c0001t0017g0097 a0001c0001t0019g0216 a0001c0001t0021g0203 a0001c0001t0021g0299 a0001c0001t0022g0228 a0001c0001t0022g0238 a0001c0001t0025g0035 a0001c0001t0026g0074 a0001c0001t0027g0061 a0001c0001t0031g0154 a0001c0001t0033g0167 a0001c0001t0040g0169 a0001c0001t0041g0237 a0001c0001t0042g0202 a0002c0002t0002g0024 a0002c0002t0002g0046 a0002c0002t0002g0050 a0002c0002t0002g0106 a0002c0002t0003g0177 a0002c0002t0003g0180 a0002c0002t0003g0184 a0002c0002t0003g0189 a0002c0002t0003g0196 a0002c0002t0003g0205 a0002c0002t0003g0208 a0002c0002t0003g0220 a0002c0002t0003g0243 a0002c0002t0003g0246 a0002c0002t0003g0252 a0002c0002t0003g0261 a0002c0002t0003g0294 a0002c0002t0003g0296 a0002c0002t0003g0304 a0002c0002t0003g0309 a0002c0002t0004g0204 a0002c0002t0009g0041 a0002c0002t0009g0056 a0002c0002t0009g0071 a0002c0002t0016g0078 a0002c0002t0016g0079 a0003c0003t0009g0053	194	332	0.5843	-13	c.139 others(32): Show c.139-29706_139-29694delAAGTAGCTGGGAC	NCEH1	ENSG00000144959.11	transcript	ENST00000475381.7	protein_coding	1/4			chr3	TogoVar
NCK1_chr3_136857208_136956606	136874402	AGTCCTGA others(6): Show AGTCCTGACCTCAG	A A	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04199.hp1 HG04115.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0053 a0001c0001t0001g0046 a0001c0001t0001g0053	2	232	0.0086	-13	c.-19 others(32): Show c.-19+12052_-19+12064delCCTGACCTCAGGT	NCK1	ENSG00000158092.7	transcript	ENST00000481752.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
NCK1_chr3_136857208_136956606	136889044	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01109.hp1 HG01243.hp2 others(15): Show HG00738.hp1 HG01109.hp1 HG01243.hp2 HG02109.hp2 HG02451.hp2 HG02486.hp2 HG02572.hp2 HG02630.hp2 HG02818.hp2 HG02965.hp1 HG02976.hp2 HG03195.hp1 HG03471.hp2 HG04115.hp1 NA18522.hp2 NA19240.hp2 NA20129.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 others(15): Show a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0065 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0110 a0001c0001t0012g0085	18	232	0.0776	-13	c.-19 others(32): Show c.-19+26709_-19+26721delTTTTTTTTTTTTT	NCK1	ENSG00000158092.7	transcript	ENST00000481752.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
NCK2_chr2_105739912_105899272	105798403	TATAAAAT others(6): Show TATAAAATGAAGAG	T T	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0266 a0001c0001t0001g0266	1	334	0.0030	-13	c.-20 others(34): Show c.-200-18024_-200-18012delAAAATGAAGAGAT	NCK2	ENSG00000071051.14	transcript	ENST00000233154.9	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCK2_chr2_105739912_105899272	105880936	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(119): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00544.hp2 HG00609.hp2 HG00621.hp2 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00735.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01167.hp1 HG01169.hp1 HG01192.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01517.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02486.hp1 HG02486.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03579.hp2 HG03704.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04184.hp1 HG04199.hp2 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18956.hp1 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18971.hp2 NA18973.hp2 NA18974.hp2 NA18979.hp2 NA18980.hp1 NA18982.hp1 NA18983.hp1 NA19000.hp1 NA19002.hp2 NA19003.hp1 NA19007.hp2 NA19030.hp1 NA19043.hp2 NA19056.hp2 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19077.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19091.hp1 NA20752.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0007 a0001c0001 a0005c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(17): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0001t0028 a0001c0001t0030 a0001c0001t0031 a0001c0001t0034 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0005c0007t0004	a0001c0001t0001g0092 a0001c0001t0001g0095 a0001c0001t0001g0183 others(118): Show a0001c0001t0001g0092 a0001c0001t0001g0095 a0001c0001t0001g0183 a0001c0001t0001g0192 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0003g0006 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0119 a0001c0001t0003g0128 a0001c0001t0003g0129 a0001c0001t0003g0131 a0001c0001t0003g0133 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0139 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0148 a0001c0001t0003g0164 a0001c0001t0003g0176 a0001c0001t0003g0201 a0001c0001t0003g0205 a0001c0001t0003g0210 a0001c0001t0003g0215 a0001c0001t0003g0220 a0001c0001t0003g0227 a0001c0001t0003g0237 a0001c0001t0003g0286 a0001c0001t0003g0298 a0001c0001t0003g0299 a0001c0001t0003g0301 a0001c0001t0003g0318 a0001c0001t0004g0002 a0001c0001t0004g0031 a0001c0001t0004g0037 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0040 a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0047 a0001c0001t0004g0050 a0001c0001t0004g0056 a0001c0001t0004g0060 a0001c0001t0004g0061 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0004g0065 a0001c0001t0004g0066 a0001c0001t0004g0068 a0001c0001t0004g0069 a0001c0001t0004g0070 a0001c0001t0004g0077 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0086 a0001c0001t0004g0087 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0004g0319 a0001c0001t0009g0181 a0001c0001t0010g0009 a0001c0001t0010g0010 a0001c0001t0010g0020 a0001c0001t0010g0314 a0001c0001t0011g0030 a0001c0001t0011g0059 a0001c0001t0011g0094 a0001c0001t0013g0309 a0001c0001t0013g0310 a0001c0001t0013g0311 a0001c0001t0013g0312 a0001c0001t0014g0134 a0001c0001t0014g0160 a0001c0001t0017g0269 a0001c0001t0017g0300 a0001c0001t0020g0051 a0001c0001t0021g0084 a0001c0001t0021g0085 a0001c0001t0024g0049 a0001c0001t0028g0265 a0001c0001t0030g0228 a0001c0001t0031g0143 a0001c0001t0034g0282 a0001c0001t0036g0093 a0001c0001t0038g0076 a0001c0001t0039g0063 a0005c0007t0004g0067	122	334	0.3653	-13	c.227 others(28): Show c.227-372_227-360delTTTTTTTTTTTTT	NCK2	ENSG00000071051.14	transcript	ENST00000233154.9	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCKAP5_chr2_132666788_133573463	132761037	TCCTCTTT others(6): Show TCCTCTTTTTTCCC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02074.hp1 HG02083.hp1 others(14): Show HG00408.hp1 HG02074.hp1 HG02083.hp1 HG02257.hp2 HG02280.hp1 HG02559.hp1 HG02622.hp2 HG02886.hp2 HG03130.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18983.hp1 NA19004.hp2 NA19043.hp1 NA20129.hp1 NA21309.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0007 a0014 a0015 a0017	a0001c0001 a0002c0002 a0003c0004 others(6): Show a0001c0001 a0002c0002 a0003c0004 a0004c0003 a0005c0007 a0007c0005 a0014c0027 a0015c0026 a0017c0016	a0001c0001t0002 a0002c0002t0001 a0002c0002t0004 others(9): Show a0001c0001t0002 a0002c0002t0001 a0002c0002t0004 a0003c0004t0001 a0003c0004t0006 a0004c0003t0001 a0005c0007t0001 a0007c0005t0001 a0007c0005t0007 a0014c0027t0001 a0015c0026t0001 a0017c0016t0001	a0001c0001t0002g0034 a0002c0002t0001g0060 a0002c0002t0004g0001 others(14): Show a0001c0001t0002g0034 a0002c0002t0001g0060 a0002c0002t0004g0001 a0003c0004t0001g0038 a0003c0004t0001g0041 a0003c0004t0001g0058 a0003c0004t0001g0061 a0003c0004t0006g0005 a0004c0003t0001g0064 a0005c0007t0001g0048 a0005c0007t0001g0050 a0007c0005t0001g0029 a0007c0005t0001g0049 a0007c0005t0007g0066 a0014c0027t0001g0044 a0015c0026t0001g0027 a0017c0016t0001g0052	17	70	0.2429	-13	c.512 others(34): Show c.5128+12766_5128+12778delGGGAAAAAAGAGG	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	16/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	132771839	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG03195.hp1 HG02896.hp2 HG03195.hp1	a0001 a0012 a0001 a0012	a0001c0024 a0012c0028 a0001c0024 a0012c0028	a0001c0024t0001 a0012c0028t0001 a0001c0024t0001 a0012c0028t0001	a0001c0024t0001g0013 a0012c0028t0001g0006 a0001c0024t0001g0013 a0012c0028t0001g0006	2	70	0.0286	-13	c.512 others(32): Show c.5128+1964_5128+1976delAAAAAAAAAAAAA	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	16/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	133242246	TTTCTTTT others(6): Show TTTCTTTTCTTTTC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02723.hp1 HG03195.hp1 HG02257.hp1 HG02723.hp1 HG03195.hp1	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0009 a0002c0002 a0012c0028 a0001c0009 a0002c0002 a0012c0028	a0001c0009t0003 a0002c0002t0005 a0012c0028t0001 a0001c0009t0003 a0002c0002t0005 a0012c0028t0001	a0001c0009t0003g0056 a0002c0002t0005g0069 a0012c0028t0001g0006 a0001c0009t0003g0056 a0002c0002t0005g0069 a0012c0028t0001g0006	3	70	0.0429	-13	c.144 others(32): Show c.144-28480_144-28468delGAAAAGAAAAGAA	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	4/19			chr2	TogoVar
NCKIPSD_chr3_48668844_48690915	48690802	AAGAAAAA others(6): Show AAGAAAAAAAAGAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 NA19030.hp2 HG01884.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0050 a0001c0002t0001g0097 a0001c0001t0002g0050 a0001c0002t0001g0097	2	310	0.0065	-13	c.-50 others(24): Show c.-5008_-4996delCTCTTTTTTTTCT	NCKIPSD	ENSG00000213672.8	transcript	ENST00000294129.7	protein_coding		4888		chr3	TogoVar
NCMAP_chr1_24551087_24614328	24589290	CGTTTGAT others(6): Show CGTTTGATACTGAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02486.hp2 HG02572.hp2 others(4): Show HG01891.hp2 HG02486.hp2 HG02572.hp2 HG02630.hp2 HG03139.hp1 HG03225.hp1 HG03471.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0008 a0001c0001t0015 others(1): Show a0001c0001t0003 a0001c0001t0008 a0001c0001t0015 a0002c0002t0004	a0001c0001t0003g0392 a0001c0001t0003g0394 a0001c0001t0008g0150 others(4): Show a0001c0001t0003g0392 a0001c0001t0003g0394 a0001c0001t0008g0150 a0001c0001t0008g0396 a0001c0001t0015g0008 a0001c0001t0015g0009 a0002c0002t0004g0395	7	402	0.0174	-13	c.-7- others(28): Show c.-7-6131_-7-6119delTTGATACTGAAGT	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCMAP_chr1_24551087_24614328	24604600	AAAAAAAT others(6): Show AAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	402	0.0025	-13	c.168 others(29): Show c.168-1004_168-992delAAAAATATATATA	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCMAP_chr1_24551087_24614328	24604602	AAAAATAT others(6): Show AAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0064	1	402	0.0025	-13	c.168 others(29): Show c.168-1002_168-990delAAATATATATATA	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCOA1_chr2_24486254_24775702	24523924	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03453.hp2 HG03579.hp1 HG01884.hp1 HG03453.hp2 HG03579.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0006 a0001c0005t0012 a0001c0002t0006 a0001c0005t0012	a0001c0002t0006g0118 a0001c0005t0012g0081 a0001c0005t0012g0082 a0001c0002t0006g0118 a0001c0005t0012g0081 a0001c0005t0012g0082	3	314	0.0096	-13	c.-39 others(34): Show c.-396+32339_-396+32351delAAAAAAAAAAAAA	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552341	ATATATAT others(6): Show ATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0268 a0001c0001t0001g0268	1	314	0.0032	-13	c.-39 others(34): Show c.-395-11952_-395-11940delATATATATATATT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552347	ATATATAT others(6): Show ATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0048 a0001c0002t0003g0048	1	314	0.0032	-13	c.-39 others(34): Show c.-395-11946_-395-11934delATATATTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552349	ATATATTT others(6): Show ATATATTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03098.hp2 HG03453.hp1 HG02451.hp2 HG03098.hp2 HG03453.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0042 a0001c0002t0003g0043 a0001c0002t0003g0063 a0001c0002t0003g0042 a0001c0002t0003g0043 a0001c0002t0003g0063	3	314	0.0096	-13	c.-39 others(34): Show c.-395-11944_-395-11932delATATTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552351	ATATTTTT others(6): Show ATATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA19063.hp1 HG03486.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0164 a0001c0002t0003g0053 a0001c0001t0001g0164 a0001c0002t0003g0053	2	314	0.0064	-13	c.-39 others(34): Show c.-395-11942_-395-11930delATTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552353	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02027.hp2 HG02074.hp2 others(9): Show HG00621.hp1 HG02027.hp2 HG02074.hp2 HG03669.hp2 NA18950.hp2 NA18959.hp2 NA18975.hp1 NA18982.hp2 NA18986.hp1 NA18998.hp1 NA19057.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0001 a0001c0001t0005 a0001c0014t0001 a0001c0001t0001 a0001c0001t0005 a0001c0014t0001	a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0133 others(9): Show a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0157 a0001c0001t0001g0161 a0001c0001t0001g0167 a0001c0001t0005g0148 a0001c0001t0005g0152 a0001c0014t0001g0173	12	314	0.0382	-13	c.-39 others(34): Show c.-395-11923_-395-11911delTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24576157	TTTTTTGT others(6): Show TTTTTTGTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01070.hp1 HG01071.hp1 others(19): Show HG00408.hp1 HG01070.hp1 HG01071.hp1 HG01175.hp2 HG01255.hp2 HG01517.hp1 HG01952.hp1 HG02735.hp2 HG03017.hp1 NA18959.hp1 NA18977.hp1 NA18979.hp2 NA18982.hp1 NA18990.hp2 NA19002.hp1 NA19011.hp1 NA19063.hp1 NA19078.hp2 NA19079.hp2 NA19088.hp2 NA20752.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0001 a0001c0002t0003 a0001c0001t0004 a0001c0002t0001 a0001c0002t0003	a0001c0001t0004g0177 a0001c0001t0004g0197 a0001c0001t0004g0201 others(19): Show a0001c0001t0004g0177 a0001c0001t0004g0197 a0001c0001t0004g0201 a0001c0001t0004g0202 a0001c0001t0004g0203 a0001c0001t0004g0212 a0001c0002t0001g0029 a0001c0002t0001g0064 a0001c0002t0003g0030 a0001c0002t0003g0031 a0001c0002t0003g0032 a0001c0002t0003g0038 a0001c0002t0003g0039 a0001c0002t0003g0040 a0001c0002t0003g0041 a0001c0002t0003g0044 a0001c0002t0003g0047 a0001c0002t0003g0048 a0001c0002t0003g0053 a0001c0002t0003g0065 a0001c0002t0003g0067 a0001c0002t0003g0314	22	314	0.0701	-13	c.-25 others(32): Show c.-259-8313_-259-8301delGTTTTTTGTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24614199	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0303 a0001c0001t0001g0303	1	314	0.0032	-13	c.-17 others(34): Show c.-175+29659_-175+29671delTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24638180	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02647.hp1 HG02886.hp1 HG01891.hp1 HG02647.hp1 HG02886.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0213 a0001c0002t0010g0214 a0001c0002t0010g0215 a0001c0002t0010g0213 a0001c0002t0010g0214 a0001c0002t0010g0215	3	314	0.0096	-13	c.-17 others(32): Show c.-174-5772_-174-5760delTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24639902	AAGTATGT others(6): Show AAGTATGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0213 a0001c0002t0010g0213	1	314	0.0032	-13	c.-17 others(32): Show c.-174-4063_-174-4051delAGTATGTGTGTGT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22			chr2	TogoVar
NCOA1_chr2_24486254_24775702	24671245	TTGAGTGG others(6): Show TTGAGTGGAAAAAG	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02723.hp2 HG02622.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0001 a0001c0001t0001 a0001c0006t0001	a0001c0001t0001g0275 a0001c0006t0001g0262 a0001c0001t0001g0275 a0001c0006t0001g0262	2	314	0.0064	-13	c.257 others(30): Show c.257-2119_257-2107delGAGTGGAAAAAGT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	6/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24719028	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0262 a0001c0006t0001g0262	1	314	0.0032	-13	c.260 others(32): Show c.2600-7546_2600-7534delAAAAAAAAAAAAA	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	14/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24727138	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0163 a0001c0001t0007g0163	1	314	0.0032	-13	c.271 others(30): Show c.2717+444_2717+456delAAAAAAAAAAAAA	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	15/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24757671	GTTACCTA others(6): Show GTTACCTAGAAGAT	G G	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02970.hp1 HG02965.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0216 a0001c0001t0014g0217 a0001c0001t0014g0216 a0001c0001t0014g0217	2	314	0.0064	-13	c.388 others(30): Show c.3882-297_3882-285delCTAGAAGATTTAC	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	20/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA2_chr8_70104782_70408808	70250392	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02055.hp1 HG03098.hp2 others(1): Show HG01891.hp2 HG02055.hp1 HG03098.hp2 HG03471.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0012 a0001c0005t0012	a0001c0005t0012g0048 a0001c0005t0012g0049 a0001c0005t0012g0050 others(1): Show a0001c0005t0012g0048 a0001c0005t0012g0049 a0001c0005t0012g0050 a0001c0005t0012g0051	4	322	0.0124	-13	c.-19 others(32): Show c.-19-33641_-19-33629delTTTTTTTTTTTTT	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	2/22			chr8	TogoVar
NCOA3_chr20_47496887_47661872	47517445	CTTTTTCT others(6): Show CTTTTTCTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02572.hp2 HG02922.hp2 others(2): Show HG01106.hp2 HG02572.hp2 HG02922.hp2 HG03209.hp1 HG03540.hp2	a0007 a0007	a0007c0010 a0007c0010	a0007c0010t0014 a0007c0010t0014	a0007c0010t0014g0032 a0007c0010t0014g0033 a0007c0010t0014g0035 others(2): Show a0007c0010t0014g0032 a0007c0010t0014g0033 a0007c0010t0014g0035 a0007c0010t0014g0036 a0007c0010t0014g0068	5	316	0.0158	-13	c.-99 others(32): Show c.-99+15432_-99+15444delCTTTTTTTTTTTT	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr20	TogoVar
NCOA3_chr20_47496887_47661872	47550423	AACAAGAG others(6): Show AACAAGAGCAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0006 a0004c0006t0006	a0004c0006t0006g0082 a0004c0006t0006g0082	1	316	0.0032	-13	c.-98 others(32): Show c.-98-32759_-98-32747delACAAGAGCAAAAC	NCOA3	ENSG00000124151.19	transcript	ENST00000371998.8	protein_coding	1/22			chr20	TogoVar
NCOA6_chr20_34709774_34830651	34778958	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0205 a0001c0002t0001g0205	1	290	0.0035	-13	c.236 others(30): Show c.236-2523_236-2511delTTTTTTTTTTTTT	NCOA6	ENSG00000198646.14	transcript	ENST00000359003.7	protein_coding	3/14			chr20	TogoVar
NCOA7_chr6_125785960_125937034	125827188	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(67): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp2 HG01258.hp1 HG01981.hp2 HG02004.hp2 HG02027.hp1 HG02080.hp2 HG02132.hp2 HG02486.hp2 HG02698.hp2 HG02735.hp1 HG03017.hp2 HG03195.hp1 HG03491.hp1 HG03492.hp2 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG04199.hp2 HG04228.hp1 NA18939.hp1 NA18944.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp1 NA18960.hp2 NA18961.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp2 NA18968.hp1 NA18986.hp1 NA18987.hp2 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp2 NA19005.hp2 NA19060.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19086.hp1 NA20752.hp1 NA20805.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017 a0002c0002t0002 a0003c0003t0003 a0004c0013t0013	a0001c0001t0001g0054 a0001c0001t0001g0086 a0001c0001t0001g0109 others(67): Show a0001c0001t0001g0054 a0001c0001t0001g0086 a0001c0001t0001g0109 a0001c0001t0001g0121 a0001c0001t0001g0158 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0178 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0226 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0236 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0251 a0001c0001t0001g0258 a0001c0001t0001g0265 a0001c0001t0001g0267 a0001c0001t0002g0174 a0001c0001t0002g0217 a0001c0001t0002g0228 a0001c0001t0005g0266 a0001c0001t0009g0173 a0001c0001t0009g0186 a0001c0001t0009g0188 a0001c0001t0016g0232 a0001c0001t0017g0247 a0002c0002t0002g0223 a0003c0003t0003g0218 a0004c0013t0013g0264	70	270	0.2593	-13	c.50+ others(30): Show c.50+11800_50+11812delAAAAAAAAAAAAA	NCOA7	ENSG00000111912.20	transcript	ENST00000392477.7	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr6	TogoVar
NCOA7_chr6_125785960_125937034	125840868	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03831.hp1 NA18939.hp2 NA18950.hp1 HG03831.hp1 NA18939.hp2 NA18950.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0003 a0001c0001t0001 a0003c0003t0003	a0001c0001t0001g0043 a0003c0003t0003g0111 a0003c0003t0003g0115 a0001c0001t0001g0043 a0003c0003t0003g0111 a0003c0003t0003g0115	3	270	0.0111	-13	c.51- others(30): Show c.51-14122_51-14110delTTTTTTTTTTTTT	NCOA7	ENSG00000111912.20	transcript	ENST00000392477.7	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr6	TogoVar

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