view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCFD2_chr4_52867982_53371061 | 52960715 | CACACACA others(6): Show |
C | intron_variant | MODIFIER | HG02630.hp1 NA19240.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0003 | a0001c0001t0001g0142 a0001c0003t0003g0062 |
2 | 162 | 0.0124 | -13 | c.156 others(34): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 5/8 | chr4 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 53254793 | GTTTATTT others(6): Show |
G | intron_variant | MODIFIER | HG02965.hp2 | a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0068 | 1 | 162 | 0.0062 | -13 | c.131 others(34): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 4/8 | chr4 | TogoVar | |||||||
SCG2_chr2_223591940_223607361 | 223603728 | GCCAATGG others(6): Show |
G | upstream_gene_variant | MODIFIER | HG03239.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 394 | 0.0025 | -13 | c.-14 others(24): Show |
SCG2 | ENSG00000171951.5 | transcript | ENST00000305409.3 | protein_coding | 1368 | chr2 | TogoVar | |||||||
SCG3_chr15_51676503_51726026 | 51709688 | TATATATA others(6): Show |
T | intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0198 | 1 | 402 | 0.0025 | -13 | c.120 others(32): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | chr15 | TogoVar | |||||||
SCG3_chr15_51676503_51726026 | 51709691 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG02965.hp2 HG06807.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0003 | a0001c0001t0001g0207 a0002c0003t0003g0371 |
2 | 402 | 0.0050 | -13 | c.120 others(32): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51709693 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG02886.hp1 HG03139.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0003 | a0001c0001t0002g0209 a0002c0003t0003g0303 |
2 | 402 | 0.0050 | -13 | c.120 others(32): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51709695 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG02155.hp2 HG03927.hp2 |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0003c0004t0001 | a0001c0001t0001g0160 a0003c0004t0001g0022 |
2 | 402 | 0.0050 | -13 | c.120 others(32): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCG3_chr15_51676503_51726026 | 51709697 | ATATATTT others(6): Show |
A | intron_variant | MODIFIER | HG02630.hp1 HG02723.hp1 HG02895.hp2 |
a0002 | a0002c0003 | a0002c0003t0001a0002c0003t0003 | a0002c0003t0001g0363 a0002c0003t0003g0365 a0002c0003t0003g0366 |
3 | 402 | 0.0075 | -13 | c.120 others(32): Show |
SCG3 | ENSG00000104112.9 | transcript | ENST00000220478.8 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCGB1C2_chr17_132569_144067 | 141383 | GGGGACCT others(6): Show |
G | downstream_gene_variant | MODIFIER | HG03927.hp1 NA18974.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 2 | 402 | 0.0050 | -13 | c.*24 others(24): Show |
SCGB1C2 | ENSG00000268320.4 | transcript | ENST00000595228.4 | protein_coding | 2317 | chr17 | TogoVar | |||||||
SCGB1C2_chr17_132569_144067 | 141484 | CTGGTGAG others(6): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(196): Show |
a0001a0004a0005others(1): Show | a0001c0001a0004c0004a0005c0007others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(13): Show |
199 | 402 | 0.4950 | -13 | c.*25 others(24): Show |
SCGB1C2 | ENSG00000268320.4 | transcript | ENST00000595228.4 | protein_coding | 2418 | chr17 | TogoVar | |||||||
SCGB2B2_chr19_34585644_34682159 | 34612018 | AATTCTTT others(6): Show |
A | intron_variant | MODIFIER | HG03927.hp2 | a0001 | a0001c0001 | a0001c0001t0125 | a0001c0001t0125g0336 | 1 | 370 | 0.0027 | -13 | c.-20 others(36): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | |||||||
SCGB2B2_chr19_34585644_34682159 | 34612022 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00558.hp2 others(111): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0002a0005c0004others(1): Show | a0001c0001t0006a0001c0001t0007a0001c0001t0008others(38): Show | a0001c0001t0006g0094 a0001c0001t0006g0107 a0001c0001t0006g0141 others(109): Show |
114 | 370 | 0.3081 | -13 | c.-20 others(36): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | |||||||
SCGN_chr6_25647215_25706783 | 25658003 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp2 HG01123.hp2 others(36): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0064 others(32): Show |
39 | 368 | 0.1060 | -13 | c.154 others(30): Show |
SCGN | ENSG00000079689.15 | transcript | ENST00000377961.3 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159680522 | TATATATG others(6): Show |
T | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG02055.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0019 a0001c0001t0001g0072 a0001c0001t0001g0097 others(3): Show |
6 | 100 | 0.0600 | -13 | c.64- others(30): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159843001 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG01106.hp1 HG02055.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0009 others(10): Show |
13 | 100 | 0.1300 | -13 | c.760 others(32): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCIMP_chr17_5203920_5239860 | 5229384 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0303 | 1 | 386 | 0.0026 | -13 | c.21+ others(28): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 1/4 | chr17 | TogoVar | |||||||
SCIN_chr7_12565720_12665182 | 12657560 | ATATATAT others(6): Show |
A | 3_prime_UTR_variant | MODIFIER | HG02280.hp1 NA18522.hp1 |
a0001 | a0001c0001 | a0001c0001t0177a0001c0001t0189 | a0001c0001t0177g0200 a0001c0001t0189g0201 |
2 | 372 | 0.0054 | -13 | c.*48 others(24): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 16/16 | 4847 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
SCLY_chr2_238056001_238104413 | 238096713 | CAGCCTGC others(6): Show |
C | intron_variant | MODIFIER | HG01257.hp1 | a0002 | a0002c0002 | a0002c0002t0072 | a0002c0002t0072g0187 | 1 | 392 | 0.0026 | -13 | c.110 others(28): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 10/11 | chr2 | TogoVar | |||||||
SCMH1_chr1_41022202_41247306 | 41089787 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG02258.hp2 HG02572.hp2 HG02622.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0300 a0001c0001t0006g0301 a0001c0001t0006g0302 others(2): Show |
5 | 304 | 0.0165 | -13 | c.746 others(32): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 8/15 | chr1 | TogoVar | |||||||
SCMH1_chr1_41022202_41247306 | 41195131 | CAAAAAAA others(6): Show |
C | intron_variant | MODIFIER | NA18983.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0271 | 1 | 304 | 0.0033 | -13 | c.-11 others(32): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 1/15 | chr1 | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18251309 | CAAAAAAA others(6): Show |
C | intron_variant | MODIFIER | HG02738.hp1 HG04204.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0164 a0001c0002t0001g0029 |
2 | 247 | 0.0081 | -13 | c.145 others(32): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 11/14 | chrX | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107778223 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG02622.hp2 HG03195.hp2 NA18906.hp1 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0012 | a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0150 others(1): Show |
4 | 250 | 0.0160 | -13 | c.-59 others(30): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107826266 | AAAAAGAA others(6): Show |
A | upstream_gene_variant | MODIFIER | HG00544.hp1 HG02055.hp1 HG02922.hp1 others(6): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0013others(6): Show | a0001c0001t0001g0010 a0001c0001t0003g0080 a0001c0001t0013g0011 others(6): Show |
9 | 250 | 0.0360 | -13 | c.-22 others(24): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1954 | chr6 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38719367 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG01099.hp2 HG02615.hp2 HG02723.hp1 others(5): Show |
a0002 | a0002c0001a0002c0012a0002c0039 | a0002c0001t0001a0002c0001t0002a0002c0012t0001others(1): Show | a0002c0001t0001g0179 a0002c0001t0001g0184 a0002c0001t0001g0241 others(5): Show |
8 | 372 | 0.0215 | -13 | c.350 others(30): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 20/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38734844 | GTAAAAAG others(6): Show |
G | intron_variant | MODIFIER | NA19055.hp1 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0239 | 1 | 372 | 0.0027 | -13 | c.228 others(32): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 15/27 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938540 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG03831.hp1 | a0001 | a0001c0006 | a0001c0006t0006 | a0001c0006t0006g0307 | 1 | 314 | 0.0032 | -13 | c.488 others(30): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938542 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | NA19066.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0169 | 1 | 314 | 0.0032 | -13 | c.488 others(30): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938544 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG03486.hp2 NA18959.hp1 NA18963.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0003a0001c0002t0001a0002c0003t0001 | a0001c0001t0003g0265 a0001c0002t0001g0167 a0002c0003t0001g0019 others(3): Show |
6 | 314 | 0.0191 | -13 | c.488 others(30): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938546 | ATATATTT others(6): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0130 a0001c0001t0002g0138 |
2 | 314 | 0.0064 | -13 | c.488 others(30): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938550 | ATTTTTTT others(6): Show |
A | intron_variant | MODIFIER | HG02895.hp1 HG02896.hp1 |
a0001 | a0001c0012 | a0001c0012t0001 | a0001c0012t0001g0260 a0001c0012t0001g0261 |
2 | 314 | 0.0064 | -13 | c.488 others(30): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 39033290 | TTATTTAC others(6): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG01891.hp2 HG01978.hp1 others(31): Show |
a0001a0002a0011 | a0001c0001a0002c0003a0011c0019 | a0001c0001t0002a0002c0003t0001a0002c0003t0008others(1): Show | a0001c0001t0002g0004 a0001c0001t0002g0017 a0002c0003t0001g0007 others(31): Show |
34 | 314 | 0.1083 | -13 | c.-40 others(30): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 1/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 39042967 | AAAAAAAA others(6): Show |
A | intron_variant | MODIFIER | HG01071.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0067 | 1 | 314 | 0.0032 | -13 | c.-40 others(32): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 1/29 | chr3 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166039910 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp2 HG00423.hp1 others(65): Show |
a0001 | a0001c0001a0001c0023 | a0001c0001t0001a0001c0001t0012a0001c0001t0017others(13): Show | a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 others(65): Show |
68 | 356 | 0.1910 | -13 | c.241 others(30): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 16/28 | chr2 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166090029 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0293 | 1 | 356 | 0.0028 | -13 | c.-14 others(34): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 2/28 | chr2 | TogoVar | |||||||
SCN1B_chr19_35025470_35045449 | 35029542 | CAAAAAAA others(6): Show |
C | upstream_gene_variant | MODIFIER | HG01891.hp2 HG02965.hp2 NA18986.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0020 |
5 | 404 | 0.0124 | -13 | c.-12 others(24): Show |
SCN1B | ENSG00000105711.14 | transcript | ENST00000262631.11 | protein_coding | 927 | chr19 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165272793 | CACACACA others(6): Show |
C | intron_variant | MODIFIER | NA19058.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0206 | 1 | 358 | 0.0028 | -13 | c.-51 others(32): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2B_chr11_118157806_118181639 | 118178887 | ATTATTAT others(6): Show |
A | upstream_gene_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0196 | 1 | 450 | 0.0022 | -13 | c.-24 others(24): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 2249 | chr11 | TogoVar | |||||||
SCN2B_chr11_118157806_118181639 | 118179408 | CTTTTTTT others(6): Show |
C | upstream_gene_variant | MODIFIER | HG02602.hp1 NA18983.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0180 a0001c0001t0007g0229 |
2 | 450 | 0.0044 | -13 | c.-29 others(24): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 2770 | chr11 | TogoVar | |||||||
SCN3A_chr2_165082526_165209050 | 165156512 | CAAAAAAA others(6): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(92): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(25): Show | a0001c0001t0001g0005 a0001c0001t0001g0063 a0001c0001t0001g0074 others(89): Show |
95 | 314 | 0.3026 | -13 | c.103 others(30): Show |
SCN3A | ENSG00000153253.20 | transcript | ENST00000283254.12 | protein_coding | 9/27 | chr2 | TogoVar | |||||||
SCN4A_chr17_63933554_63977918 | 63943203 | CAGAGATG others(6): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00558.hp1 HG00609.hp1 others(141): Show |
a0001a0004a0006others(11): Show | a0001c0002a0001c0005a0001c0006others(32): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0012others(43): Show | a0001c0002t0001g0001 a0001c0002t0001g0014 a0001c0002t0001g0015 others(109): Show |
144 | 356 | 0.4045 | -13 | c.401 others(30): Show |
SCN4A | ENSG00000007314.12 | transcript | ENST00000435607.3 | protein_coding | 22/23 | chr17 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38555071 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | NA19082.hp2 | a0025 | a0025c0075 | a0025c0075t0003 | a0025c0075t0003g0166 | 1 | 340 | 0.0029 | -13 | c.454 others(30): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 26/27 | chr3 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38555082 | TATATATA others(6): Show |
T | intron_variant | MODIFIER | NA18944.hp2 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0124 | 1 | 340 | 0.0029 | -13 | c.454 others(30): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 26/27 | chr3 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38555090 | TATATATA others(6): Show |
T | intron_variant | MODIFIER | HG03098.hp2 | a0006 | a0006c0068 | a0006c0068t0017 | a0006c0068t0017g0039 | 1 | 340 | 0.0029 | -13 | c.454 others(30): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 26/27 | chr3 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38555093 | ATATATAT others(6): Show |
A | intron_variant | MODIFIER | HG01192.hp2 HG02735.hp2 |
a0001a0002 | a0001c0023a0002c0007 | a0001c0023t0001a0002c0007t0003 | a0001c0023t0001g0221 a0002c0007t0003g0046 |
2 | 340 | 0.0059 | -13 | c.454 others(30): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 26/27 | chr3 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38562004 | GGGGCACA others(6): Show |
G | intron_variant | MODIFIER | HG00423.hp1 HG00558.hp1 HG00609.hp1 others(75): Show |
a0001a0002a0005others(6): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(26): Show | a0001c0001t0002g0004 a0001c0001t0002g0020 a0001c0001t0002g0033 others(73): Show |
78 | 340 | 0.2294 | -13 | c.396 others(30): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 22/27 | chr3 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38626071 | GAACACCC others(6): Show |
G | intron_variant | MODIFIER | NA18963.hp1 | a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0103 | 1 | 340 | 0.0029 | -13 | c.393 others(30): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 3/27 | chr3 | TogoVar | |||||||
SCN8A_chr12_51586233_51817864 | 51639879 | CTTTTTTT others(6): Show |
C | intron_variant | MODIFIER | HG00639.hp1 HG03130.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0006 | a0001c0001t0003g0192 a0001c0001t0006g0202 |
2 | 202 | 0.0099 | -13 | c.-54 others(32): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51640212 | GTTTTTTT others(6): Show |
G | intron_variant | MODIFIER | HG01884.hp2 HG02055.hp2 HG02257.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003a0001c0006others(3): Show | a0001c0001t0011a0001c0003t0006a0001c0003t0009others(5): Show | a0001c0001t0011g0178 a0001c0003t0006g0116 a0001c0003t0009g0114 others(5): Show |
8 | 202 | 0.0396 | -13 | c.-54 others(32): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN9A_chr2_166190185_166380944 | 166199975 | GTTTTTTT others(6): Show |
G | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00741.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0015a0001c0002t0001a0001c0003t0001others(2): Show | a0001c0001t0015g0149 a0001c0002t0001g0184 a0001c0003t0001g0225 others(3): Show |
6 | 296 | 0.0203 | -13 | c.477 others(30): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 26/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166222932 | AAAAAAAA others(6): Show |
A | intron_variant | MODIFIER | HG03453.hp1 | a0004 | a0004c0008 | a0004c0008t0022 | a0004c0008t0022g0010 | 1 | 296 | 0.0034 | -13 | c.439 others(32): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 24/26 | chr2 | TogoVar |