Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C14orf93_chr14_22980894_23015143	23003898	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02897.hp1 HG02615.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0034 a0001c0001t0002g0035	2	344	0.0058	-13	c.-37 others(32): Show c.-379-4509_-379-4497delAAAAAAAAAAAAA	C14orf93	ENSG00000100802.15	transcript	ENST00000299088.11	protein_coding	1/6			chr14	TogoVar
C14orf93_chr14_22980894_23015143	23008154	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00621.hp1 others(50): Show HG00140.hp1 HG00323.hp1 HG00621.hp1 HG00621.hp2 HG00738.hp1 HG01106.hp1 HG01361.hp2 HG01515.hp1 HG01891.hp1 HG01975.hp2 HG02055.hp1 HG02080.hp2 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03516.hp2 HG03688.hp1 HG03834.hp1 HG04184.hp1 HG04228.hp1 NA18941.hp2 NA18973.hp2 NA18990.hp2 NA19007.hp1 NA19056.hp1 NA19074.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA21309.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0007	a0001c0001 a0001c0005 a0002c0002 others(2): Show a0001c0001 a0001c0005 a0002c0002 a0005c0007 a0007c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0013 a0001c0001t0015 a0001c0005t0001 a0002c0002t0001 a0002c0002t0002 a0005c0007t0002 a0007c0010t0001	a0001c0001t0001g0089 a0001c0001t0001g0108 a0001c0001t0001g0109 others(44): Show a0001c0001t0001g0089 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0100 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0115 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0003g0001 a0001c0001t0003g0010 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0098 a0001c0001t0003g0099 a0001c0001t0004g0090 a0001c0001t0013g0110 a0001c0001t0015g0025 a0001c0005t0001g0091 a0002c0002t0001g0113 a0002c0002t0002g0011 a0002c0002t0002g0012 a0002c0002t0002g0024 a0002c0002t0002g0101 a0002c0002t0002g0111 a0002c0002t0002g0114 a0002c0002t0002g0116 a0002c0002t0002g0117 a0002c0002t0002g0118 a0002c0002t0002g0119 a0002c0002t0002g0120 a0002c0002t0002g0121 a0002c0002t0002g0122 a0002c0002t0002g0125 a0002c0002t0002g0126 a0005c0007t0002g0023 a0007c0010t0001g0112	53	344	0.1541	-13	c.-38 others(32): Show c.-380+1934_-380+1946delTTTTTTTTTTTTT	C14orf93	ENSG00000100802.15	transcript	ENST00000299088.11	protein_coding	1/6			chr14	TogoVar
C15orf40_chr15_82989817_83016639	82996655	AAATAAAA others(6): Show AAATAAAATAAAAT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00323.hp2 HG00639.hp2 others(42): Show HG00140.hp1 HG00323.hp2 HG00639.hp2 HG00735.hp2 HG00738.hp1 HG01099.hp2 HG01175.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp1 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02145.hp2 HG02257.hp1 HG02273.hp1 HG02280.hp2 HG02451.hp1 HG02630.hp1 HG02698.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG03017.hp2 HG03209.hp2 HG03225.hp1 HG03486.hp2 HG03490.hp2 HG03710.hp1 HG03942.hp2 HG04184.hp2 HG06807.hp2 NA18906.hp1 NA19030.hp1 NA19240.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0006 a0001c0001t0115 a0001c0001t0153 others(18): Show a0001c0001t0006 a0001c0001t0115 a0001c0001t0153 a0002c0002t0006 a0002c0002t0013 a0003c0003t0005 a0003c0003t0006 a0003c0003t0042 a0003c0003t0043 a0003c0003t0063 a0003c0003t0065 a0003c0003t0114 a0003c0003t0116 a0003c0003t0117 a0003c0003t0119 a0003c0003t0120 a0003c0003t0121 a0003c0003t0122 a0003c0003t0123 a0003c0003t0124 a0003c0003t0148	a0001c0001t0006g0065 a0001c0001t0115g0132 a0001c0001t0153g0066 others(21): Show a0001c0001t0006g0065 a0001c0001t0115g0132 a0001c0001t0153g0066 a0002c0002t0006g0155 a0002c0002t0013g0014 a0003c0003t0005g0005 a0003c0003t0005g0191 a0003c0003t0005g0203 a0003c0003t0006g0010 a0003c0003t0006g0052 a0003c0003t0042g0053 a0003c0003t0043g0054 a0003c0003t0063g0189 a0003c0003t0065g0204 a0003c0003t0114g0196 a0003c0003t0116g0197 a0003c0003t0117g0190 a0003c0003t0119g0198 a0003c0003t0120g0192 a0003c0003t0121g0193 a0003c0003t0122g0199 a0003c0003t0123g0200 a0003c0003t0124g0201 a0003c0003t0148g0202	45	406	0.1108	-13	c.89 others(24): Show c.8929_*8941delATTTTATTTTATT	C15orf40	ENSG00000169609.14	transcript	ENST00000304177.10	protein_coding	4/4	8929		chr15	TogoVar
C15orf61_chr15_67516131_67535146	67518266	TTTTTTTT others(6): Show TTTTTTTTTTTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG01358.hp2 HG02895.hp1 HG00639.hp1 HG01358.hp2 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	3	416	0.0072	-13	c.-29 others(24): Show c.-2982_-2970delTTTTTTTTTTTTC	C15orf61	ENSG00000189227.6	transcript	ENST00000342683.6	protein_coding		2864		chr15	TogoVar
C16orf54_chr16_29737463_29750990	29739392	TAATAATA others(6): Show TAATAATAATAATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG01981.hp2 HG00280.hp2 HG00323.hp2 HG01981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0022 a0001c0001t0001 a0001c0001t0003 a0001c0001t0022	a0001c0001t0001g0001 a0001c0001t0003g0003 a0001c0001t0022g0029 a0001c0001t0001g0001 a0001c0001t0003g0003 a0001c0001t0022g0029	3	310	0.0097	-13	c.48 others(24): Show c.4872_*4884delTATTATTATTATT	C16orf54	ENSG00000185905.4	transcript	ENST00000329410.4	protein_coding		3070		chr16	TogoVar
C16orf74_chr16_85702517_85756096	85706201	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG01243.hp2 HG01256.hp1 others(3): Show HG01167.hp1 HG01243.hp2 HG01256.hp1 HG01258.hp1 HG02615.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0091 a0001c0001t0001g0109 a0001c0001t0001g0110 others(3): Show a0001c0001t0001g0091 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0005g0371	6	410	0.0146	-13	c.17 others(24): Show c.1794_*1806delTTTTTTTTTTTTT	C16orf74	ENSG00000154102.11	transcript	ENST00000284245.9	protein_coding		1315		chr16	TogoVar
C16orf89_chr16_5039122_5070956	5055987	GTGTGTGT others(6): Show GTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0087 a0002c0003t0001g0087	1	432	0.0023	-13	c.763 others(26): Show c.763+53_763+65delACACACACACACA	C16orf89	ENSG00000153446.16	transcript	ENST00000472572.8	protein_coding	5/7			chr16	TogoVar
C16orf90_chr16_3488484_3500489	3489112	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00544.hp1 HG00642.hp2 others(76): Show HG00423.hp1 HG00544.hp1 HG00642.hp2 HG01069.hp2 HG01071.hp1 HG01099.hp1 HG01243.hp1 HG01256.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02280.hp2 HG02523.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp1 HG02976.hp1 HG02976.hp2 HG03139.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03710.hp1 HG03831.hp1 HG03942.hp1 HG04199.hp1 HG04204.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18944.hp2 NA18945.hp2 NA18951.hp1 NA18954.hp2 NA18957.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp2 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18975.hp1 NA18975.hp2 NA18978.hp2 NA18981.hp2 NA18985.hp2 NA18989.hp1 NA18991.hp2 NA18997.hp1 NA18998.hp2 NA19003.hp1 NA19009.hp1 NA19043.hp1 NA19055.hp2 NA19057.hp1 NA19062.hp2 NA19074.hp2 NA19077.hp1 NA19084.hp2 NA19091.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0017 a0001c0003t0007 a0002c0002t0002	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0002g0008 a0001c0001t0005g0009 a0001c0001t0008g0012 a0001c0001t0017g0023 a0001c0003t0007g0011 a0002c0002t0002g0003	79	446	0.1771	-13	c.47 others(24): Show c.4714_*4726delAAAAAAAAAAAAA	C16orf90	ENSG00000215131.11	transcript	ENST00000437192.8	protein_coding		4371		chr16	TogoVar
C16orf90_chr16_3488484_3500489	3490397	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp2 HG02109.hp1 HG02886.hp2 HG01496.hp2 HG02109.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0001 a0001c0001t0001g0002	3	446	0.0067	-13	c.34 others(24): Show c.3429_*3441delTTTTTTTTTTTTT	C16orf90	ENSG00000215131.11	transcript	ENST00000437192.8	protein_coding		3086		chr16	TogoVar
C16orf92_chr16_30018198_30029704	30022246	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	352	0.0028	-13	c.-10 others(24): Show c.-1094_-1082delAAAAAAAAAAAAA	C16orf92	ENSG00000167194.8	transcript	ENST00000681219.1	protein_coding		951		chr16	TogoVar
C17orf67_chr17_56786913_56838920	56809927	CCCTCACA others(6): Show CCCTCACACATACT	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	292	0.0034	-13	c.156 others(30): Show c.156+4929_156+4941delAGTATGTGTGAGG	C17orf67	ENSG00000214226.9	transcript	ENST00000397861.7	protein_coding	6/7			chr17	TogoVar
C17orf98_chr17_38830086_38846438	38840617	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0066	1	431	0.0023	-13	c.207 others(28): Show c.207+553_207+565delTTTTTTTTTTTTT	C17orf98	ENSG00000275489.2	transcript	ENST00000614158.2	protein_coding	1/2			chr17	TogoVar
C17orf98_chr17_38830086_38846438	38842111	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG03669.hp1 HG02109.hp2 HG03669.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0002g0152 a0002c0002t0001g0022 a0001c0001t0002g0152 a0002c0002t0001g0022	2	431	0.0046	-13	c.-73 others(22): Show c.-735_-723delTTTTTTTTTTTTT	C17orf98	ENSG00000275489.2	transcript	ENST00000614158.2	protein_coding		674		chr17	TogoVar
C17orf98_chr17_38830086_38846438	38845112	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	431	0.0023	-13	c.-37 others(24): Show c.-3736_-3724delAAAAAAAAAAAAA	C17orf98	ENSG00000275489.2	transcript	ENST00000614158.2	protein_coding		3675		chr17	TogoVar
C17orf99_chr17_78141385_78171297	78149331	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0354 a0001c0003t0001g0354	1	446	0.0022	-13	c.70+ others(28): Show c.70+2438_70+2450delAAAAAAAAAAAAA	C17orf99	ENSG00000187997.12	transcript	ENST00000340363.10	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr17	TogoVar
C17orf99_chr17_78141385_78171297	78167730	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0255 a0001c0001t0002g0255	1	446	0.0022	-13	c.16 others(24): Show c.1685_*1697delTTTTTTTTTTTTT	C17orf99	ENSG00000187997.12	transcript	ENST00000340363.10	protein_coding		1434		chr17	TogoVar
C18orf21_chr18_35967679_35984278	35974845	AACAAAAT others(6): Show AACAAAATATTCTG	A A	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0030 a0002c0002t0001g0030	1	400	0.0025	-13	c.101 others(26): Show c.101-49_101-37delCAAAATATTCTGA	C18orf21	ENSG00000141428.17	transcript	ENST00000592875.6	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr18	TogoVar
C18orf21_chr18_35967679_35984278	35974868	ATTGTGAG others(6): Show ATTGTGAGTTTCAT	A A	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0030 a0002c0002t0001g0030	1	400	0.0025	-13	c.101 others(26): Show c.101-23_101-11delGAGTTTCATTTGT	C18orf21	ENSG00000141428.17	transcript	ENST00000592875.6	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr18	TogoVar
C19orf12_chr19_29693937_29720261	29707153	TTGAGACC others(6): Show TTGAGACCAGCCTG	T T	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0052 a0002c0003t0052	a0002c0003t0052g0112 a0002c0003t0052g0112	1	418	0.0024	-13	c.160 others(30): Show c.160+1088_160+1100delCAGGCTGGTCTCA	C19orf12	ENSG00000131943.20	transcript	ENST00000323670.14	protein_coding	2/2			chr19	TogoVar
C19orf12_chr19_29693937_29720261	29717815	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02922.hp2 HG03098.hp1 HG02922.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0049 a0001c0001t0026g0049	2	418	0.0048	-13	c.-27 others(24): Show c.-2714_-2702delAAAAAAAAAAAAA	C19orf12	ENSG00000131943.20	transcript	ENST00000323670.14	protein_coding		2555		chr19	TogoVar
C19orf12_chr19_29693937_29720261	29719377	ATATATAT others(6): Show ATATATATATAATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0059 a0001c0002t0001g0059	1	418	0.0024	-13	c.-42 others(24): Show c.-4276_-4264delAATTATATATATA	C19orf12	ENSG00000131943.20	transcript	ENST00000323670.14	protein_coding		4117		chr19	TogoVar
C19orf18_chr19_57953437_57979534	57969566	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00741.hp2 others(4): Show HG00140.hp1 HG00639.hp2 HG00741.hp2 HG01070.hp2 HG01081.hp1 HG01255.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0106 a0001c0001t0003g0107 a0001c0001t0003g0108 others(4): Show a0001c0001t0003g0106 a0001c0001t0003g0107 a0001c0001t0003g0108 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0003g0111 a0001c0001t0003g0112	7	408	0.0172	-13	c.268 others(30): Show c.268+2884_268+2896delTTTTTTTTTTTTT	C19orf18	ENSG00000177025.3	transcript	ENST00000314391.3	protein_coding	3/5			chr19	TogoVar
C19orf18_chr19_57953437_57979534	57973145	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00642.hp1 HG00738.hp1 others(53): Show HG00280.hp1 HG00642.hp1 HG00738.hp1 HG01074.hp1 HG01109.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp2 HG01261.hp2 HG01516.hp1 HG01884.hp1 HG01943.hp2 HG01952.hp1 HG02257.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02886.hp1 HG02895.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03139.hp1 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03540.hp1 HG03704.hp1 HG04184.hp2 NA18522.hp2 NA18612.hp1 NA18906.hp2 NA18982.hp1 NA18983.hp2 NA19006.hp1 NA19063.hp1 NA19079.hp2 NA19082.hp2 NA19083.hp1 NA19089.hp2 NA19240.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0104 a0001c0001t0002g0001 a0001c0001t0002g0022 others(33): Show a0001c0001t0001g0104 a0001c0001t0002g0001 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0004g0021 a0001c0001t0004g0285 a0001c0001t0004g0286 a0001c0001t0004g0287	56	408	0.1373	-13	c.227 others(28): Show c.227-654_227-642delTTTTTTTTTTTTT	C19orf18	ENSG00000177025.3	transcript	ENST00000314391.3	protein_coding	2/5			chr19	TogoVar
C19orf38_chr19_10843415_10874790	10859371	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0369 a0001c0001t0001g0369	1	384	0.0026	-13	c.462 others(28): Show c.462-543_462-531delATATATATATATA	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	4/6			chr19	TogoVar
C19orf38_chr19_10843415_10874790	10859372	ATATATAT others(6): Show ATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02630.hp1 HG02559.hp2 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	2	384	0.0052	-13	c.462 others(28): Show c.462-541_462-529delATATATATATATT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf38_chr19_10843415_10874790	10859374	ATATATAT others(6): Show ATATATATATATTT	A A	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA19012.hp1 NA18747.hp1 NA19012.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0028 a0003c0003t0001g0064 a0001c0001t0001g0028 a0003c0003t0001g0064	2	384	0.0052	-13	c.462 others(28): Show c.462-539_462-527delATATATATATTTT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf38_chr19_10843415_10874790	10859376	ATATATAT others(6): Show ATATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0330 a0001c0001t0001g0330	1	384	0.0026	-13	c.462 others(28): Show c.462-537_462-525delATATATATTTTTT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf38_chr19_10843415_10874790	10873624	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19062.hp1 NA19068.hp2 NA19075.hp1 NA19062.hp1 NA19068.hp2 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0054 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0054	3	384	0.0078	-13	c.42 others(24): Show c.4258_*4270delTTTTTTTTTTTTT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding		3835		chr19	TogoVar
C1QB_chr1_22648236_22666637	22658245	TGGCCTCC others(6): Show TGGCCTCCTGCTGA	T T	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0085 a0001c0001t0001g0085	1	430	0.0023	-13	c.-23 others(30): Show c.-23-1194_-23-1182delGGCCTCCTGCTGA	C1QB	ENSG00000173369.18	transcript	ENST00000509305.6	protein_coding	1/2			chr1	TogoVar
C1QTNF2_chr5_160342754_160375626	160357166	TGAGCTGA others(6): Show TGAGCTGACAAGGG	T T	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02080.hp2 HG02165.hp1 HG00423.hp2 HG02080.hp2 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0057 a0001c0001t0003g0152 a0001c0001t0003g0057 a0001c0001t0003g0152	3	452	0.0066	-13	c.-9- others(28): Show c.-9-2159_-9-2147delCCCTTGTCAGCTC	C1QTNF2	ENSG00000145861.9	transcript	ENST00000652664.2	protein_coding	1/2			chr5	TogoVar
C1QTNF7_chr4_15423033_15451167	15450534	ACACCCAC others(6): Show ACACCCACACACAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0008 a0001c0001t0004g0008	1	444	0.0023	-13	c.77 others(24): Show c.7736_*7748delCACCCACACACAG	C1QTNF7	ENSG00000163145.13	transcript	ENST00000444304.3	protein_coding		4368		chr4	TogoVar
C1RL_chr12_7089554_7114214	7108975	GTGTGTGT others(6): Show GTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0127 a0002c0002t0001g0127	1	438	0.0023	-13	c.71+ others(26): Show c.71+122_71+134delACACACACACACA	C1RL	ENSG00000139178.12	transcript	ENST00000266542.9	protein_coding	1/5			chr12	TogoVar
C1RL_chr12_7089554_7114214	7108976	TGTGTGTG others(6): Show TGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0021 a0002c0002t0021	a0002c0002t0021g0093 a0002c0002t0021g0093	1	438	0.0023	-13	c.71+ others(26): Show c.71+121_71+133delCACACACACACAC	C1RL	ENSG00000139178.12	transcript	ENST00000266542.9	protein_coding	1/5			chr12	TogoVar
C1S_chr12_7055718_7076032	7071727	GTGAACGG others(6): Show GTGAACGGAAAGTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	370	0.0027	-13	c.10 others(24): Show c.1077_*1089delTGAACGGAAAGTT	C1S	ENSG00000182326.17	transcript	ENST00000360817.10	protein_coding		696		chr12	TogoVar
C1orf100_chr1_244347635_244394663	244374587	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0382 a0001c0001t0001g0382	1	452	0.0022	-13	c.57- others(26): Show c.57-770_57-758delTTTTTTTTTTTTT	C1orf100	ENSG00000173728.11	transcript	ENST00000308105.5	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf109_chr1_37676570_37695529	37687059	AGTGTGTG others(6): Show AGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0140 a0001c0001t0003g0140	1	432	0.0023	-13	c.276 others(28): Show c.276-620_276-608delCACACACACACAC	C1orf109	ENSG00000116922.15	transcript	ENST00000486637.2	protein_coding	2/4			chr1	TogoVar
C1orf127_chr1_10941475_10987076	10983045	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp2 HG02004.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0155 a0002c0002t0003g0155	1	392	0.0026	-13	c.-10 others(24): Show c.-1021_-1009delTTTTTTTTTTTTT	C1orf127	ENSG00000175262.15	transcript	ENST00000377004.9	protein_coding		970		chr1	TogoVar
C1orf141_chr1_67087165_67139970	67131786	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01884.hp2 HG02630.hp1 others(2): Show HG00639.hp1 HG01884.hp2 HG02630.hp1 HG02647.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0233 a0001c0001t0001g0253 a0002c0002t0002g0231 others(2): Show a0001c0001t0001g0233 a0001c0001t0001g0253 a0002c0002t0002g0231 a0002c0002t0002g0251 a0002c0002t0002g0252	5	300	0.0167	-13	c.-10 others(30): Show c.-103-572_-103-560delAAAAAAAAAAAAA	C1orf141	ENSG00000203963.12	transcript	ENST00000684719.1	protein_coding	1/7			chr1	TogoVar
C1orf167_chr1_11757193_11794585	11793450	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	350	0.0029	-13	c.40 others(24): Show c.4005_*4017delTTTTTTTTTTTTT	C1orf167	ENSG00000215910.8	transcript	ENST00000688073.1	protein_coding		3866		chr1	TogoVar
C1orf216_chr1_35708877_35723884	35722969	AATATTCT others(6): Show AATATTCTAGCACT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	376	0.0027	-13	c.-42 others(24): Show c.-4281_-4269delAGTGCTAGAATAT	C1orf216	ENSG00000142686.8	transcript	ENST00000270815.5	protein_coding		4086		chr1	TogoVar
C1orf43_chr1_154201720_154225590	154211324	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18941.hp1 homoSapiens_chm13v2.hp1 NA18941.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0110 a0001c0001t0007g0050 a0001c0001t0001g0110 a0001c0001t0007g0050	2	374	0.0054	-13	c.566 others(28): Show c.566+983_566+995delAAAAAAAAAAAAA	C1orf43	ENSG00000143612.21	transcript	ENST00000368521.10	protein_coding	6/6			chr1	TogoVar
C1orf94_chr1_34171907_34224131	34182774	AAGGTGGG others(6): Show AAGGTGGGGAGTGT	A A	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01169.hp1 HG01168.hp2 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0031 a0001c0001t0002g0031	2	356	0.0056	-13	c.320 others(30): Show c.320+4669_320+4681delTGGGGAGTGTAGG	C1orf94	ENSG00000142698.15	transcript	ENST00000488417.2	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf94_chr1_34171907_34224131	34207261	GGGTGTGT others(6): Show GGGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0006 a0003c0003t0006	a0003c0003t0006g0193 a0003c0003t0006g0193	1	356	0.0028	-13	c.144 others(30): Show c.1447-894_1447-882delGTGTGTGTGTGTG	C1orf94	ENSG00000142698.15	transcript	ENST00000488417.2	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
C20orf203_chr20_32626625_32678941	32648428	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0169 a0001c0001t0026g0169	1	360	0.0028	-13	c.11 others(32): Show c.1177+814_*1177+826delAAAAAAAAAAAAA	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding	4/5			chr20	TogoVar
C20orf203_chr20_32626625_32678941	32651168	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	splice_region_variant others(1): Show splice_region_variant intron_variant	LOW	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0276 a0001c0001t0001g0276	1	360	0.0028	-13	c.-14 others(25): Show c.-14-15_-14-3delTTTTTTTTTTTTT	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding	2/5			chr20	TogoVar
C20orf204_chr20_64031182_64044001	64031682	AAAAAAAA others(6): Show AAAAAAAAAACAAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	392	0.0026	-13	c.-46 others(24): Show c.-4641_-4629delAAAAAAAAACAAC	C20orf204	ENSG00000196421.9	transcript	ENST00000636176.2	protein_coding		4499		chr20	TogoVar
C21orf58_chr21_46296130_46328870	46303739	ATATATAT others(6): Show ATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18982.hp2 NA18944.hp2 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0052 a0001c0001t0004g0055 a0001c0001t0004g0052 a0001c0001t0004g0055	2	378	0.0053	-13	c.722 others(30): Show c.722-1176_722-1164delAAAAAAATATATA	C21orf58	ENSG00000160298.18	transcript	ENST00000291691.12	protein_coding	6/7			chr21	TogoVar
C21orf91_chr21_17783974_17824356	17820651	ATTCTACC others(6): Show ATTCTACCCATCTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00597.hp2 HG02027.hp2 others(13): Show HG00438.hp1 HG00597.hp2 HG02027.hp2 HG02080.hp1 NA18961.hp2 NA18966.hp1 NA18972.hp2 NA19000.hp2 NA19003.hp1 NA19004.hp1 NA19063.hp1 NA19067.hp2 NA19070.hp2 NA19074.hp1 NA19075.hp2 NA19079.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0002c0002 a0001c0004 a0002c0002	a0001c0004t0006 a0001c0004t0048 a0001c0004t0053 others(1): Show a0001c0004t0006 a0001c0004t0048 a0001c0004t0053 a0002c0002t0001	a0001c0004t0006g0005 a0001c0004t0006g0036 a0001c0004t0006g0090 others(4): Show a0001c0004t0006g0005 a0001c0004t0006g0036 a0001c0004t0006g0090 a0001c0004t0006g0093 a0001c0004t0048g0091 a0001c0004t0053g0092 a0002c0002t0001g0007	16	414	0.0387	-13	c.-13 others(24): Show c.-1369_-1357delAAGATGGGTAGAA	C21orf91	ENSG00000154642.11	transcript	ENST00000284881.9	protein_coding		1296		chr21	TogoVar
C22orf31_chr22_29053672_29066831	29064675	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG02886.hp2 HG03516.hp2 others(4): Show HG00558.hp1 HG02886.hp2 HG03516.hp2 HG03927.hp1 NA18906.hp2 NA18989.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0005 a0001c0001 a0001c0002 a0002c0005	a0001c0001t0001 a0001c0002t0001 a0002c0005t0001 a0001c0001t0001 a0001c0002t0001 a0002c0005t0001	a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0002t0001g0004 others(2): Show a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0002t0001g0004 a0001c0002t0001g0024 a0002c0005t0001g0047	7	472	0.0148	-13	c.-28 others(24): Show c.-2896_-2884delAAAAAAAAAAAAA	C22orf31	ENSG00000100249.5	transcript	ENST00000216071.5	protein_coding		2845		chr22	TogoVar
C22orf31_chr22_29053672_29066831	29066539	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00738.hp2 HG01074.hp2 others(29): Show HG00140.hp2 HG00738.hp2 HG01074.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp1 HG01167.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01993.hp1 HG02040.hp1 HG02056.hp1 HG02074.hp2 HG02145.hp1 HG02280.hp1 HG02486.hp2 HG02976.hp2 HG03130.hp2 HG03225.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03831.hp2 HG03927.hp2 NA18980.hp1 NA18981.hp2 NA19060.hp1 NA19076.hp2 NA19086.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(2): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004 a0002c0005	a0001c0001t0001 a0001c0002t0001 a0002c0003t0001 others(2): Show a0001c0001t0001 a0001c0002t0001 a0002c0003t0001 a0002c0004t0001 a0002c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 others(14): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0027 a0001c0001t0001g0127 a0001c0002t0001g0002 a0001c0002t0001g0004 a0001c0002t0001g0009 a0001c0002t0001g0018 a0001c0002t0001g0035 a0001c0002t0001g0048 a0001c0002t0001g0091 a0001c0002t0001g0120 a0001c0002t0001g0126 a0002c0003t0001g0031 a0002c0004t0001g0055 a0002c0005t0001g0118	32	472	0.0678	-13	c.-47 others(24): Show c.-4760_-4748delAAAAAAAAAAAAA	C22orf31	ENSG00000100249.5	transcript	ENST00000216071.5	protein_coding		4709		chr22	TogoVar

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