Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
CSMD3_chr8_112217928_113441939	113112435	ATATATAT others(7): Show ATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0051 a0002c0003t0002g0051	1	80	0.0125	-14	c.710 others(33): Show c.710-13486_710-13473delCATATATATATATA		CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	4/70						chr8	TogoVar
CSMD3_chr8_112217928_113441939	113210003	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG02055.hp1 HG02257.hp2 others(20): Show HG00673.hp1 HG02055.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02559.hp1 HG02717.hp1 HG02735.hp1 HG02895.hp2 HG02922.hp2 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp2 HG03225.hp1 HG03516.hp1 HG03516.hp2 HG03688.hp1 HG04115.hp1 NA18990.hp1 NA19030.hp2 NA19063.hp2 NA20300.hp2	a0001 a0003 a0005 others(6): Show a0001 a0003 a0005 a0006 a0008 a0009 a0010 a0011 a0013	a0001c0001 a0001c0006 a0001c0016 others(13): Show a0001c0001 a0001c0006 a0001c0016 a0001c0017 a0001c0019 a0001c0023 a0003c0002 a0003c0020 a0005c0012 a0005c0013 a0006c0008 a0008c0014 a0009c0018 a0010c0025 a0011c0035 a0013c0026	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(16): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0006t0003 a0001c0016t0001 a0001c0017t0003 a0001c0019t0005 a0001c0023t0001 a0003c0002t0001 a0003c0020t0001 a0005c0012t0001 a0005c0013t0001 a0006c0008t0005 a0008c0014t0005 a0009c0018t0003 a0010c0025t0003 a0011c0035t0001 a0013c0026t0001	a0001c0001t0001g0016 a0001c0001t0003g0010 a0001c0001t0004g0002 others(20): Show a0001c0001t0001g0016 a0001c0001t0003g0010 a0001c0001t0004g0002 a0001c0001t0004g0007 a0001c0001t0007g0045 a0001c0006t0003g0055 a0001c0006t0003g0074 a0001c0016t0001g0073 a0001c0017t0003g0017 a0001c0019t0005g0065 a0001c0023t0001g0056 a0003c0002t0001g0059 a0003c0002t0001g0075 a0003c0020t0001g0080 a0005c0012t0001g0038 a0005c0013t0001g0039 a0006c0008t0005g0004 a0006c0008t0005g0005 a0008c0014t0005g0040 a0009c0018t0003g0071 a0010c0025t0003g0052 a0011c0035t0001g0003 a0013c0026t0001g0057	23	80	0.2875	-14	c.515 others(33): Show c.515-36101_515-36088delACACACACACACAC		CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	3/70						chr8	TogoVar
CSMD3_chr8_112217928_113441939	113374834	AAAAAAAA others(7): Show AAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0004 a0001c0006t0004	a0001c0006t0004g0060 a0001c0006t0004g0060	1	80	0.0125	-14	c.179 others(33): Show c.179-60055_179-60042delGTTTTTTTTTTTTT		CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	1/70						chr8	TogoVar
CSN2_chr4_69950256_69970728	69965408	CTATATAT others(7): Show CTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0044 a0001c0001t0002g0044	1	448	0.0022	-14	c.-13 others(29): Show c.-13+259_-13+272delTATATATATATATA		CSN2	ENSG00000135222.7	transcript	ENST00000353151.4	protein_coding	1/7						chr4	TogoVar
CSNK1A1_chr5_149487982_149556439	149542592	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01175.hp2 HG01516.hp2 others(1): Show HG00099.hp1 HG01175.hp2 HG01516.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0014 a0001c0001t0027 a0001c0001t0003 a0001c0001t0014 a0001c0001t0027	a0001c0001t0003g0144 a0001c0001t0003g0154 a0001c0001t0014g0163 others(1): Show a0001c0001t0003g0144 a0001c0001t0003g0154 a0001c0001t0014g0163 a0001c0001t0027g0132	4	390	0.0103	-14	c.230 others(31): Show c.230+7469_230+7482delTATATATATATATA		CSNK1A1	ENSG00000113712.19	transcript	ENST00000377843.8	protein_coding	2/9						chr5	TogoVar
CSNK1A1_chr5_149487982_149556439	149542626	ATATATAT others(7): Show ATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0129 a0001c0001t0008g0129	1	390	0.0026	-14	c.230 others(31): Show c.230+7435_230+7448delCATATATATATATA		CSNK1A1	ENSG00000113712.19	transcript	ENST00000377843.8	protein_coding	2/9						chr5	TogoVar
CSNK1G1_chr15_64160525_64361173	64278377	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	176	0.0057	-14	c.182 others(33): Show c.182-19150_182-19137delACACACACACACAC		CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding	2/11						chr15	TogoVar
CSNK1G1_chr15_64160525_64361173	64278408	GTGTGTGT others(7): Show GTGTGTGTGTGTATA	G G	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02129.hp1 HG03927.hp1 others(9): Show HG02071.hp2 HG02129.hp1 HG03927.hp1 NA18939.hp2 NA18957.hp2 NA18962.hp2 NA18999.hp1 NA19002.hp2 NA19054.hp1 NA19067.hp2 NA20752.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0011 a0001c0001t0021 others(1): Show a0001c0001t0004 a0001c0001t0011 a0001c0001t0021 a0001c0001t0029	a0001c0001t0004g0125 a0001c0001t0004g0126 a0001c0001t0004g0128 others(9): Show a0001c0001t0004g0125 a0001c0001t0004g0126 a0001c0001t0004g0128 a0001c0001t0004g0129 a0001c0001t0004g0131 a0001c0001t0004g0133 a0001c0001t0004g0134 a0001c0001t0011g0106 a0001c0001t0011g0107 a0001c0001t0011g0108 a0001c0001t0021g0109 a0001c0001t0029g0127	12	176	0.0682	-14	c.182 others(33): Show c.182-19181_182-19168delTATACACACACACA		CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding	2/11						chr15	TogoVar
CSNK1G1_chr15_64160525_64361173	64293234	CTTCATAA others(7): Show CTTCATAATTCTCCT	C C	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0103 a0001c0001t0006g0103	1	176	0.0057	-14	c.181 others(31): Show c.181+7071_181+7084delAGGAGAATTATGAA		CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding	2/11						chr15	TogoVar
CSNK1G1_chr15_64160525_64361173	64360702	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(96): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00621.hp1 HG00733.hp1 HG00733.hp2 HG01069.hp1 HG01069.hp2 HG01109.hp1 HG01167.hp1 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp2 HG01496.hp1 HG01496.hp2 HG01934.hp2 HG01978.hp1 HG01978.hp2 HG02055.hp2 HG02071.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02615.hp1 HG02630.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp2 HG03710.hp2 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04184.hp1 HG04199.hp1 HG06807.hp1 NA18906.hp1 NA18939.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18949.hp2 NA18957.hp1 NA18962.hp1 NA18999.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19030.hp2 NA19043.hp2 NA19054.hp2 NA19067.hp1 NA19088.hp1 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0002c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0014 a0001c0001t0024 a0001c0001t0028 a0001c0002t0001 a0001c0002t0006 a0001c0002t0014 a0001c0002t0025 a0001c0002t0027 a0001c0003t0001 a0001c0003t0002 a0001c0003t0016 a0001c0005t0001 a0002c0006t0001	a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 others(96): Show a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0089 a0001c0001t0001g0097 a0001c0001t0002g0018 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0006g0103 a0001c0001t0014g0007 a0001c0001t0024g0047 a0001c0001t0028g0034 a0001c0002t0001g0001 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0014 a0001c0002t0001g0015 a0001c0002t0001g0016 a0001c0002t0001g0017 a0001c0002t0001g0021 a0001c0002t0001g0022 a0001c0002t0001g0023 a0001c0002t0001g0024 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0051 a0001c0002t0001g0052 a0001c0002t0001g0053 a0001c0002t0001g0055 a0001c0002t0001g0056 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0060 a0001c0002t0001g0063 a0001c0002t0001g0079 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 a0001c0002t0001g0095 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0100 a0001c0002t0001g0102 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0006g0019 a0001c0002t0014g0067 a0001c0002t0025g0054 a0001c0002t0027g0062 a0001c0003t0001g0083 a0001c0003t0001g0088 a0001c0003t0001g0092 a0001c0003t0001g0093 a0001c0003t0001g0094 a0001c0003t0002g0084 a0001c0003t0002g0085 a0001c0003t0002g0086 a0001c0003t0002g0087 a0001c0003t0002g0091 a0001c0003t0016g0090 a0001c0005t0001g0049 a0002c0006t0001g0059	99	176	0.5625	-14	c.-49 others(25): Show c.-4953_-4940delTTTTTTTTTTTTTT		CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding					4530		chr15	TogoVar
CSNK1G2_chr19_1936172_1986338	1968077	GCTCCTCC others(7): Show GCTCCTCCCTCCTCC	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00438.hp2 HG00558.hp1 others(64): Show HG00323.hp1 HG00438.hp2 HG00558.hp1 HG00609.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01256.hp2 HG01516.hp1 HG01891.hp1 HG01928.hp1 HG01952.hp2 HG01981.hp1 HG02056.hp1 HG02056.hp2 HG02080.hp2 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02165.hp2 HG02257.hp1 HG02293.hp2 HG02572.hp1 HG02647.hp1 HG02735.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp1 HG03491.hp2 HG03492.hp2 HG03669.hp2 HG03704.hp1 HG03710.hp1 HG04115.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18612.hp2 NA18939.hp2 NA18942.hp1 NA18944.hp2 NA18947.hp2 NA18948.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18970.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18995.hp1 NA19002.hp1 NA19002.hp2 NA19005.hp2 NA19009.hp1 NA19011.hp1 NA19065.hp2 NA19066.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19240.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0002t0002	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0056 others(61): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0161 a0001c0001t0001g0170 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0177 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0290 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0297 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0303 a0001c0001t0001g0320 a0001c0001t0001g0335 a0001c0001t0001g0345 a0001c0001t0001g0366 a0001c0001t0001g0367 a0001c0001t0001g0371 a0001c0001t0002g0063 a0001c0001t0002g0233 a0001c0001t0002g0330 a0001c0001t0007g0251 a0001c0001t0007g0252 a0001c0002t0002g0198 a0001c0002t0002g0333 a0001c0002t0002g0349	67	382	0.1754	-14	c.-26 others(33): Show c.-265-1422_-265-1409delTCCTCCCTCCTCCC		CSNK1G2	ENSG00000133275.16	transcript	ENST00000255641.13	protein_coding	1/11					INFO_REALIGN_3_PRIME	chr19	TogoVar
CSNK1G2_chr19_1936172_1986338	1968185	GCTCCTCC others(7): Show GCTCCTCCCTCCTCC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG03688.hp1 NA18970.hp2 others(3): Show HG00099.hp2 HG03688.hp1 NA18970.hp2 NA18981.hp2 NA18983.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0196 a0001c0001t0001g0222 others(1): Show a0001c0001t0001g0002 a0001c0001t0001g0196 a0001c0001t0001g0222 a0001c0001t0001g0297	6	382	0.0157	-14	c.-26 others(33): Show c.-265-1314_-265-1301delTCCTCCCTCCTCCC		CSNK1G2	ENSG00000133275.16	transcript	ENST00000255641.13	protein_coding	1/11					INFO_REALIGN_3_PRIME	chr19	TogoVar
CSNK1G2_chr19_1936172_1986338	1979432	GCCCCCCA others(7): Show GCCCCCCACCCCCCA	G G	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02559.hp1 HG03491.hp2 others(2): Show HG02523.hp2 HG02559.hp1 HG03491.hp2 HG03492.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0004 a0001c0001t0001g0294 a0001c0002t0002g0035 others(1): Show a0001c0001t0001g0004 a0001c0001t0001g0294 a0001c0002t0002g0035 a0001c0002t0002g0040	5	382	0.0131	-14	c.853 others(27): Show c.853+42_854-37delCACCCCCCACCCCC		CSNK1G2	ENSG00000133275.16	transcript	ENST00000255641.13	protein_coding	8/11					INFO_REALIGN_3_PRIME	chr19	TogoVar
CSNK1G3_chr5_123507177_123622049	123526868	GTGTGTGT others(7): Show GTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02109.hp1 HG02055.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0004 a0001c0001t0011g0004	2	294	0.0068	-14	c.-24 others(35): Show c.-248+14301_-248+14314delTGTGTGTGTGTATG		CSNK1G3	ENSG00000151292.19	transcript	ENST00000696905.1	protein_coding	1/13					INFO_REALIGN_3_PRIME	chr5	TogoVar
CSNK2A1_chr20_467498_548790	485066	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0080 a0001c0001t0080	a0001c0001t0080g0001 a0001c0001t0080g0001	1	316	0.0032	-14	c.106 others(32): Show c.1061-1004_1061-991delTTTTTTTTTTTTTT		CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13						chr20	TogoVar
CSNK2A1_chr20_467498_548790	485099	AAAAAAAA others(7): Show AAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0067 a0001c0001t0002g0067	1	316	0.0032	-14	c.106 others(33): Show c.1061-1037_1061-1024delATATTTTTTTTTTT		CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13						chr20	TogoVar
CSNK2A1_chr20_467498_548790	485101	AAAAAAAA others(7): Show AAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02083.hp1 NA18954.hp1 HG00735.hp1 HG02083.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0012 a0001c0001t0002 a0001c0001t0012	a0001c0001t0002g0045 a0001c0001t0002g0096 a0001c0001t0012g0174 a0001c0001t0002g0045 a0001c0001t0002g0096 a0001c0001t0012g0174	3	316	0.0095	-14	c.106 others(33): Show c.1061-1039_1061-1026delATATATTTTTTTTT		CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13						chr20	TogoVar
CSNK2A1_chr20_467498_548790	485105	AAAAAATA others(7): Show AAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0154 a0001c0001t0004g0154	1	316	0.0032	-14	c.106 others(33): Show c.1061-1043_1061-1030delATATATATATTTTT		CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13						chr20	TogoVar
CSNK2A1_chr20_467498_548790	485107	AAAATATA others(7): Show AAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG03471.hp1 HG01891.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0147 a0001c0001t0004g0173 a0001c0001t0004g0147 a0001c0001t0004g0173	2	316	0.0063	-14	c.106 others(33): Show c.1061-1045_1061-1032delATATATATATATTT		CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13						chr20	TogoVar
CSNK2A1_chr20_467498_548790	512306	AGCATCTT others(7): Show AGCATCTTTTTACAT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03540.hp1 HG02486.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0028 a0001c0001t0022g0029 a0001c0001t0022g0028 a0001c0001t0022g0029	2	316	0.0063	-14	c.-10 others(33): Show c.-109-3660_-109-3647delATGTAAAAAGATGC		CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	2/13						chr20	TogoVar
CSNK2A1_chr20_467498_548790	527001	CAGAGAGA others(7): Show CAGAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0177 a0001c0001t0003g0177	1	316	0.0032	-14	c.-11 others(31): Show c.-110+918_-110+931delCTCTCTCTCTCTCT		CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	2/13						chr20	TogoVar
CSNK2A2_chr16_58152907_58203106	58155746	GGGGTGTG others(7): Show GGGGTGTGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0071	1	400	0.0025	-14	c.26 others(25): Show c.2611_*2624delACACACACACACCC		CSNK2A2	ENSG00000070770.10	transcript	ENST00000262506.8	protein_coding					2160		chr16	TogoVar
CSNK2A2_chr16_58152907_58203106	58155748	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG01175.hp1 HG01891.hp2 others(13): Show HG01167.hp1 HG01175.hp1 HG01891.hp2 HG02056.hp1 HG02135.hp2 HG02155.hp2 HG02300.hp1 HG02602.hp2 HG03492.hp2 HG03834.hp2 NA18944.hp1 NA19054.hp2 NA19066.hp2 NA19081.hp2 NA20129.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0001 a0001c0001t0004 a0001c0001t0007	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0012 others(12): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0050 a0001c0001t0001g0069 a0001c0001t0001g0174 a0001c0001t0001g0182 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0202 a0001c0001t0001g0213 a0001c0001t0004g0177 a0001c0001t0004g0178 a0001c0001t0007g0155	16	400	0.0400	-14	c.26 others(25): Show c.2609_*2622delACACACACACACAC		CSNK2A2	ENSG00000070770.10	transcript	ENST00000262506.8	protein_coding					2158		chr16	TogoVar
CSNK2A3_chr11_11346942_11358250	11352670	CATGCTGT others(7): Show CATGCTGTGACAATA	C C	frameshift_variant frameshift_variant	HIGH	HG03688.hp1 HG03688.hp1	a0011 a0011	a0011c0017 a0011c0017	a0011c0017t0001 a0011c0017t0001	a0011c0017t0001g0000 a0011c0017t0001g0000	1	452	0.0022	-14	c.436 others(21): Show c.436_449delTATTGTCACAGCAT	p.Tyr others(5): Show p.Tyr146fs	CSNK2A3	ENSG00000254598.3	transcript	ENST00000528848.3	protein_coding	1/1	580/1309	436/1176	146/391			chr11	TogoVar
CSNKA2IP_chr3_88333456_88472594	88383651	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA20300.hp1 NA19043.hp2 NA20300.hp1	a0002 a0013 a0002 a0013	a0002c0002 a0013c0027 a0002c0002 a0013c0027	a0002c0002t0001 a0013c0027t0001 a0002c0002t0001 a0013c0027t0001	a0002c0002t0001g0007 a0013c0027t0001g0132 a0002c0002t0001g0007 a0013c0027t0001g0132	2	386	0.0052	-14	c.-27 others(35): Show c.-271+45018_-271+45031delTTTTTTTTTTTTTT		CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88446034	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01168.hp2 HG01891.hp1 others(2): Show HG00642.hp1 HG01168.hp2 HG01891.hp1 NA19030.hp1 NA21309.hp2	a0002 a0004 a0009 a0002 a0004 a0009	a0002c0002 a0004c0005 a0009c0015 a0002c0002 a0004c0005 a0009c0015	a0002c0002t0001 a0004c0005t0001 a0004c0005t0002 others(1): Show a0002c0002t0001 a0004c0005t0001 a0004c0005t0002 a0009c0015t0001	a0002c0002t0001g0044 a0004c0005t0001g0225 a0004c0005t0002g0375 others(2): Show a0002c0002t0001g0044 a0004c0005t0001g0225 a0004c0005t0002g0375 a0009c0015t0001g0192 a0009c0015t0001g0193	5	386	0.0130	-14	c.-27 others(35): Show c.-270-19052_-270-19039delTTCTTTCTTTCTTT		CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88449818	GAGACACA others(7): Show GAGACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01515.hp2 HG02040.hp1 others(17): Show HG01167.hp2 HG01515.hp2 HG02040.hp1 HG02080.hp2 HG02300.hp1 HG03654.hp2 HG03831.hp2 HG04228.hp1 NA18747.hp2 NA18952.hp2 NA18959.hp2 NA18966.hp2 NA18970.hp1 NA18975.hp1 NA19003.hp2 NA19056.hp2 NA19060.hp2 NA19068.hp1 NA19081.hp2 NA19090.hp2	a0001 a0005 a0011 others(2): Show a0001 a0005 a0011 a0020 a0021	a0001c0001 a0005c0007 a0011c0013 others(2): Show a0001c0001 a0005c0007 a0011c0013 a0020c0018 a0021c0021	a0001c0001t0001 a0001c0001t0002 a0005c0007t0002 others(3): Show a0001c0001t0001 a0001c0001t0002 a0005c0007t0002 a0011c0013t0002 a0020c0018t0002 a0021c0021t0002	a0001c0001t0001g0145 a0001c0001t0002g0251 a0001c0001t0002g0285 others(17): Show a0001c0001t0001g0145 a0001c0001t0002g0251 a0001c0001t0002g0285 a0001c0001t0002g0304 a0001c0001t0002g0309 a0001c0001t0002g0339 a0001c0001t0002g0346 a0001c0001t0002g0350 a0001c0001t0002g0352 a0001c0001t0002g0355 a0001c0001t0002g0356 a0001c0001t0002g0357 a0001c0001t0002g0358 a0001c0001t0002g0361 a0001c0001t0002g0365 a0001c0001t0002g0368 a0005c0007t0002g0288 a0011c0013t0002g0334 a0020c0018t0002g0344 a0021c0021t0002g0292	20	386	0.0518	-14	c.-27 others(35): Show c.-270-15268_-270-15255delGACACACACACACA		CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88458141	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0041 a0002c0002t0001g0041	1	386	0.0026	-14	c.-27 others(33): Show c.-270-6933_-270-6920delTTTTTTTTTTTTTT		CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88470727	TATATACA others(7): Show TATATACATACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG03942.hp1 NA18988.hp2 others(1): Show HG02630.hp2 HG03942.hp1 NA18988.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0001c0001t0001 a0001c0001t0002 a0001c0004t0002	a0001c0001t0001g0171 a0001c0001t0002g0278 a0001c0001t0002g0289 others(1): Show a0001c0001t0001g0171 a0001c0001t0002g0278 a0001c0001t0002g0289 a0001c0004t0002g0349	4	386	0.0104	-14	c.31 others(25): Show c.3166_*3179delATATACATACACAC		CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding					3134		chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88470729	TATACATA others(7): Show TATACATACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG01069.hp1 HG01070.hp2 others(43): Show HG00558.hp1 HG01069.hp1 HG01070.hp2 HG01123.hp2 HG01167.hp1 HG01346.hp2 HG01358.hp1 HG01884.hp1 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02074.hp1 HG02300.hp2 HG02717.hp2 HG02735.hp1 HG03209.hp2 HG03704.hp2 HG04199.hp2 NA18522.hp2 NA18944.hp2 NA18950.hp2 NA18955.hp1 NA18965.hp1 NA18968.hp1 NA18971.hp2 NA18974.hp2 NA18979.hp1 NA18982.hp2 NA18987.hp1 NA18998.hp2 NA19001.hp2 NA19004.hp1 NA19005.hp2 NA19012.hp2 NA19054.hp2 NA19068.hp2 NA19074.hp2 NA19080.hp2 NA19082.hp2 NA19085.hp2 NA19091.hp1	a0001 a0008 a0018 a0001 a0008 a0018	a0001c0001 a0001c0004 a0008c0009 others(1): Show a0001c0001 a0001c0004 a0008c0009 a0018c0022	a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 a0001c0004t0002 a0008c0009t0001 a0008c0009t0002 a0018c0022t0001	a0001c0001t0001g0013 a0001c0001t0001g0072 a0001c0001t0001g0207 others(43): Show a0001c0001t0001g0013 a0001c0001t0001g0072 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0002g0001 a0001c0001t0002g0257 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0004t0001g0061 a0001c0004t0001g0090 a0001c0004t0001g0104 a0001c0004t0001g0110 a0001c0004t0001g0203 a0001c0004t0001g0204 a0001c0004t0001g0209 a0001c0004t0001g0210 a0001c0004t0001g0211 a0001c0004t0001g0214 a0001c0004t0001g0215 a0001c0004t0001g0216 a0001c0004t0001g0217 a0001c0004t0001g0218 a0001c0004t0001g0219 a0001c0004t0001g0220 a0001c0004t0001g0221 a0001c0004t0001g0224 a0001c0004t0001g0227 a0001c0004t0001g0228 a0001c0004t0001g0229 a0001c0004t0001g0230 a0001c0004t0001g0232 a0001c0004t0001g0233 a0001c0004t0001g0236 a0001c0004t0001g0239 a0001c0004t0001g0240 a0001c0004t0002g0263 a0001c0004t0002g0280 a0001c0004t0002g0281 a0001c0004t0002g0329 a0001c0004t0002g0380 a0008c0009t0001g0011 a0008c0009t0001g0012 a0008c0009t0002g0275 a0018c0022t0001g0212	46	386	0.1192	-14	c.31 others(25): Show c.3168_*3181delATACATACACACAC		CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding					3136		chr3	TogoVar
CSPP1_chr8_67059392_67201614	67159854	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0077 a0001c0001t0001g0077	1	158	0.0063	-14	c.253 others(31): Show c.2538+719_2538+732delCTTTCTTTCTTTCT		CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	21/30					INFO_REALIGN_3_PRIME	chr8	TogoVar
CSPP1_chr8_67059392_67201614	67159858	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	158	0.0063	-14	c.253 others(31): Show c.2538+723_2538+736delCTTTCTTTCTTTCT		CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	21/30					INFO_REALIGN_3_PRIME	chr8	TogoVar
CSPP1_chr8_67059392_67201614	67159954	CTTCTTTC others(7): Show CTTCTTTCTTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	158	0.0063	-14	c.253 others(31): Show c.2538+824_2538+837delCTTTTCTTTTCTTT		CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	21/30					INFO_REALIGN_3_PRIME	chr8	TogoVar
CSRNP3_chr2_165464698_165694407	165642103	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02896.hp2 HG03209.hp2 HG02258.hp2 HG02896.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0013 a0001c0001t0047 a0001c0002t0014 a0001c0001t0013 a0001c0001t0047 a0001c0002t0014	a0001c0001t0013g0200 a0001c0001t0047g0214 a0001c0002t0014g0190 a0001c0001t0013g0200 a0001c0001t0047g0214 a0001c0002t0014g0190	3	246	0.0122	-14	c.149 others(33): Show c.149-15627_149-15614delACACACACACACAC		CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/6					INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165666141	GGAAAGAG others(7): Show GGAAAGAGAGAGGAA	G G	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02886.hp2 HG02965.hp2 others(2): Show HG00735.hp2 HG02886.hp2 HG02965.hp2 HG03139.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0007 a0001c0001t0018 a0002c0003t0050 a0001c0001t0007 a0001c0001t0018 a0002c0003t0050	a0001c0001t0007g0203 a0001c0001t0018g0061 a0001c0001t0018g0122 others(2): Show a0001c0001t0007g0203 a0001c0001t0018g0061 a0001c0001t0018g0122 a0001c0001t0018g0210 a0002c0003t0050g0209	5	246	0.0203	-14	c.408 others(31): Show c.408+8133_408+8146delGAAGAAAGAGAGAG		CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	5/6					INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165681750	TATATATA others(7): Show TATATATATATACAC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0037 a0001c0002t0037	a0001c0002t0037g0243 a0001c0002t0037g0243	1	246	0.0041	-14	c.19 others(25): Show c.1999_*2012delTATATATATACACA		CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	7/7				1999	INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRP2_chr12_76853709_76884019	76869529	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01258.hp1 HG01358.hp2 others(6): Show HG01256.hp1 HG01258.hp1 HG01358.hp2 HG01515.hp1 HG01517.hp2 HG02148.hp1 HG02698.hp2 HG03490.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0095 a0001c0001t0001g0213 others(5): Show a0001c0001t0001g0017 a0001c0001t0001g0095 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0234 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0345	9	388	0.0232	-14	c.-1- others(29): Show c.-1-3282_-1-3269delGTGTGTGTGTGTGT		CSRP2	ENSG00000175183.10	transcript	ENST00000311083.10	protein_coding	1/5						chr12	TogoVar
CSRP3_chr11_19177030_19206983	19197549	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0132	1	416	0.0024	-14	c.-29 others(31): Show c.-29+4391_-29+4404delGAAAGAAAGAAAGA		CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5						chr11	TogoVar
CST1_chr20_23742562_23755935	23751771	TTTTTTTT others(7): Show TTTTTTTTTTTTTTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG02965.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0021 a0001c0001t0008g0021	3	472	0.0064	-14	c.-91 others(23): Show c.-919_-906delCAAAAAAAAAAAAA		CST1	ENSG00000170373.9	transcript	ENST00000304749.7	protein_coding					837		chr20	TogoVar
CST2_chr20_23818769_23831729	23831597	GGAAGCTT others(7): Show GGAAGCTTCTAAACT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	470	0.0021	-14	c.-49 others(25): Show c.-4951_-4938delAGTTTAGAAGCTTC		CST2	ENSG00000170369.4	transcript	ENST00000304725.3	protein_coding					4869		chr20	TogoVar
CST4_chr20_23680640_23694038	23685075	TACACACA others(7): Show TACACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	452	0.0022	-14	c.80 others(23): Show c.805_*818delGTGTGTGTGTGTGT		CST4	ENSG00000101441.5	transcript	ENST00000217423.4	protein_coding					564		chr20	TogoVar
CST9L_chr20_23559732_23573484	23560915	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0001 a0002c0002t0001g0001	1	392	0.0026	-14	c.40 others(25): Show c.4019_*4032delAAGAAAGAAAGAAA		CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding					3816		chr20	TogoVar
CST9L_chr20_23559732_23573484	23560943	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0001 a0002c0002t0001g0001	1	392	0.0026	-14	c.39 others(25): Show c.3991_*4004delAAGAAAGAAAGAAA		CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding					3788		chr20	TogoVar
CSTF2_chrX_100815391_100846520	100844872	AAGTACAT others(7): Show AAGTACATATGTATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	299	0.0033	-14	c.41 others(25): Show c.4163_*4176delAGTACATATGTATT		CSTF2	ENSG00000101811.15	transcript	ENST00000372972.7	protein_coding					3353		chrX	TogoVar
CSTF3_chr11_33079584_33166480	33163876	AATATATA others(7): Show AATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0270 a0001c0001t0001g0270	1	360	0.0028	-14	c.-25 others(25): Show c.-2565_-2552delATATATATATATAT		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding					2397		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163925	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0117 a0001c0001t0003g0117	1	360	0.0028	-14	c.-26 others(25): Show c.-2614_-2601delAAAAAAAAAAAAAA		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding					2446		chr11	TogoVar
CSTPP1_chr11_46931761_47167247	46974857	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00438.hp1 HG00597.hp2 others(86): Show HG00280.hp2 HG00438.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01071.hp1 HG01099.hp2 HG01109.hp1 HG01243.hp1 HG01257.hp2 HG01358.hp2 HG01361.hp1 HG01515.hp1 HG01884.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp1 HG02055.hp1 HG02080.hp2 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02257.hp2 HG02273.hp1 HG02300.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02622.hp2 HG02647.hp1 HG02698.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03710.hp2 HG03831.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 NA18522.hp2 NA18947.hp2 NA18949.hp1 NA18951.hp2 NA18955.hp2 NA18962.hp2 NA18973.hp1 NA18977.hp2 NA18979.hp1 NA18983.hp2 NA18989.hp2 NA18991.hp1 NA18992.hp1 NA18995.hp2 NA19000.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19056.hp1 NA19062.hp2 NA19080.hp2 NA19084.hp1 NA19240.hp2 NA20129.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0004 a0003c0003 others(1): Show a0001c0001 a0001c0004 a0003c0003 a0006c0009	a0001c0001t0001 a0001c0004t0001 a0003c0003t0001 others(1): Show a0001c0001t0001 a0001c0004t0001 a0003c0003t0001 a0006c0009t0001	a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0001g0084 others(86): Show a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0194 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0004t0001g0111 a0003c0003t0001g0113 a0006c0009t0001g0088	89	224	0.3973	-14	c.47- others(31): Show c.47-12317_47-12304delCACACACACACACA		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	1/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47004160	GTTTTTGT others(7): Show GTTTTTGTTTTTGTT	G G	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0210 a0001c0001t0002g0210	1	224	0.0045	-14	c.149 others(33): Show c.149+16870_149+16883delGTTTTTGTTTTTTT		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	2/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47144980	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01261.hp1 HG01496.hp2 others(22): Show HG01109.hp2 HG01261.hp1 HG01496.hp2 HG01884.hp2 HG02055.hp2 HG02109.hp1 HG02145.hp2 HG02257.hp1 HG02280.hp1 HG02572.hp1 HG02615.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp1 HG03041.hp2 HG03130.hp1 HG03471.hp1 HG03486.hp1 HG03516.hp2 HG03540.hp2 NA18522.hp1 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0006 a0001c0001 a0005c0006	a0001c0001t0001 a0001c0001t0002 a0005c0006t0001 a0001c0001t0001 a0001c0001t0002 a0005c0006t0001	a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0195 others(22): Show a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0195 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0219 a0001c0001t0002g0196 a0001c0001t0002g0199 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0217 a0001c0001t0002g0218 a0005c0006t0001g0200	25	224	0.1116	-14	c.365 others(31): Show c.365+7264_365+7277delTTTTTTTTTTTTTT		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	4/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CS_chr12_56266699_56305330	56287479	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02135.hp2 HG02056.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0074 a0001c0001t0001g0078	2	316	0.0063	-14	c.43- others(27): Show c.43-848_43-835delTTTTTTTTTTTTTT		CS	ENSG00000062485.19	transcript	ENST00000351328.8	protein_coding	1/10						chr12	TogoVar

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