Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CTNNA2_chr2_79508051_80653780	80300279	GGGGTGTG others(7): Show GGGGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00735.hp1 HG01106.hp2 others(13): Show HG00673.hp2 HG00735.hp1 HG01106.hp2 HG01167.hp1 HG01884.hp1 HG02257.hp1 HG02258.hp2 HG02630.hp1 HG02809.hp2 HG03098.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG04228.hp2 NA18995.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0012 a0001c0016	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0005t0002 a0001c0012t0002 a0001c0016t0001	a0001c0001t0001g0012 a0001c0001t0001g0039 a0001c0001t0001g0042 others(13): Show a0001c0001t0001g0012 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0046 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0002t0001g0004 a0001c0002t0001g0022 a0001c0002t0001g0035 a0001c0002t0001g0047 a0001c0002t0001g0049 a0001c0002t0001g0064 a0001c0004t0001g0021 a0001c0005t0002g0009 a0001c0012t0002g0019 a0001c0016t0001g0045	16	68	0.2353	-14	c.105 others(35): Show c.1057-92930_1057-92917delGGTGTGTGTGTGTG	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80300281	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0027 a0001c0001t0002g0027	1	68	0.0147	-14	c.105 others(35): Show c.1057-92891_1057-92878delGTGTGTGTGTGTGT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80420034	GAAAAAAA others(7): Show GAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02886.hp2 HG02970.hp1 others(1): Show HG02572.hp2 HG02886.hp2 HG02970.hp1 HG03453.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0001c0007 a0001c0009 others(1): Show a0001c0002 a0001c0007 a0001c0009 a0003c0015	a0001c0002t0001 a0001c0007t0001 a0001c0009t0001 others(1): Show a0001c0002t0001 a0001c0007t0001 a0001c0009t0001 a0003c0015t0001	a0001c0002t0001g0023 a0001c0007t0001g0068 a0001c0009t0001g0003 others(1): Show a0001c0002t0001g0023 a0001c0007t0001g0068 a0001c0009t0001g0003 a0003c0015t0001g0014	4	68	0.0588	-14	c.129 others(31): Show c.1290+449_1290+462delAAAAAAAAAAAAAA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	9/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80572807	CCAATTAT others(7): Show CCAATTATAGTAATT	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02647.hp1 HG03209.hp1 HG02630.hp1 HG02647.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0004t0001g0059 a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0004t0001g0059	3	68	0.0441	-14	c.174 others(33): Show c.1742-1353_1742-1340delATTATAGTAATTCA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	12/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80596279	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0063 a0001c0005t0002g0063	1	68	0.0147	-14	c.218 others(33): Show c.2189+6829_2189+6842delTTTTTTTTTTTTTT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80606400	ACACACAC others(7): Show ACACACACACACACC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	68	0.0147	-14	c.229 others(33): Show c.2296-1782_2296-1769delACACACACACACCC	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	16/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA3_chr10_65907523_67701195	66022598	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG02280.hp2 NA18612.hp1 NA18964.hp2 others(1): Show HG02280.hp2 NA18612.hp1 NA18964.hp2 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0001c0001t0016 a0001c0001t0025 others(1): Show a0001c0001t0005 a0001c0001t0016 a0001c0001t0025 a0002c0002t0002	a0001c0001t0005g0010 a0001c0001t0016g0003 a0001c0001t0025g0045 others(1): Show a0001c0001t0005g0010 a0001c0001t0016g0003 a0001c0001t0025g0045 a0002c0002t0002g0013	4	46	0.0870	-14	c.216 others(35): Show c.2160-33815_2160-33802delGTGTGTGTGTGTGT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	15/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66178399	GTATATAT others(7): Show GTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03130.hp1 NA18964.hp2 HG03130.hp1 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0025 a0001c0001t0001 a0001c0001t0025	a0001c0001t0001g0006 a0001c0001t0025g0045 a0001c0001t0001g0006 a0001c0001t0025g0045	2	46	0.0435	-14	c.188 others(35): Show c.1885-75164_1885-75151delTATATATATATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	13/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66199795	ATATATAT others(7): Show ATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03195.hp1 HG03540.hp1 HG02922.hp1 HG03195.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0007 a0001c0001 a0001c0004 a0001c0007	a0001c0001t0012 a0001c0004t0001 a0001c0007t0015 a0001c0001t0012 a0001c0004t0001 a0001c0007t0015	a0001c0001t0012g0038 a0001c0004t0001g0018 a0001c0007t0015g0016 a0001c0001t0012g0038 a0001c0004t0001g0018 a0001c0007t0015g0016	3	46	0.0652	-14	c.188 others(35): Show c.1884+80661_1884+80674delAAAATATATATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	13/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66442798	AGACAGTG others(7): Show AGACAGTGGGTGCAG	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0007 a0001c0001t0006g0008 a0001c0001t0006g0007 a0001c0001t0006g0008	2	46	0.0435	-14	c.153 others(35): Show c.1532-63460_1532-63447delCTGCACCCACTGTC	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	11/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66487181	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG03130.hp1 HG02280.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0006 a0001c0001t0002g0024 a0001c0001t0001g0006 a0001c0001t0002g0024	2	46	0.0435	-14	c.153 others(35): Show c.1531+33422_1531+33435delAAAAAAAAAAAAAA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	11/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66543903	GTGTGTGT others(7): Show GTGTGTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	NA19080.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0041 a0001c0001t0004g0041	1	46	0.0217	-14	c.137 others(35): Show c.1375-23144_1375-23131delTATATACACACACA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66543905	GTGTGTGT others(7): Show GTGTGTGTATATATA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0015 a0001c0007t0015	a0001c0007t0015g0016 a0001c0007t0015g0016	1	46	0.0217	-14	c.137 others(35): Show c.1375-23146_1375-23133delTATATATACACACA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66543907	GTGTGTAT others(7): Show GTGTGTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0011 a0001c0001t0023g0011	1	46	0.0217	-14	c.137 others(35): Show c.1375-23148_1375-23135delTATATATATACACA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66581198	AATAAACA others(7): Show AATAAACATATGCAC	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02280.hp2 NA18964.hp1 others(1): Show HG01081.hp1 HG02280.hp2 NA18964.hp1 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0016 a0001c0001t0023 a0002c0002t0002 others(1): Show a0001c0001t0016 a0001c0001t0023 a0002c0002t0002 a0002c0002t0003	a0001c0001t0016g0003 a0001c0001t0023g0011 a0002c0002t0002g0013 others(1): Show a0001c0001t0016g0003 a0001c0001t0023g0011 a0002c0002t0002g0013 a0002c0002t0003g0042	4	46	0.0870	-14	c.137 others(35): Show c.1374+40480_1374+40493delGTGCATATGTTTAT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66597511	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 NA18960.hp2 HG01070.hp1 NA18960.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0021 a0002c0002t0017 a0001c0001t0021 a0002c0002t0017	a0001c0001t0021g0012 a0002c0002t0017g0040 a0001c0001t0021g0012 a0002c0002t0017g0040	2	46	0.0435	-14	c.137 others(35): Show c.1374+24167_1374+24180delATATATATATATAT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66635990	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02895.hp2 HG02965.hp2 others(4): Show HG02818.hp1 HG02895.hp2 HG02965.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0002 a0001c0001t0012 a0001c0001t0019 others(4): Show a0001c0001t0002 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0005t0010 a0002c0002t0003 a0002c0002t0004	a0001c0001t0002g0009 a0001c0001t0012g0038 a0001c0001t0019g0019 others(4): Show a0001c0001t0002g0009 a0001c0001t0012g0038 a0001c0001t0019g0019 a0001c0001t0020g0030 a0001c0005t0010g0034 a0002c0002t0003g0039 a0002c0002t0004g0028	7	46	0.1522	-14	c.128 others(35): Show c.1282-14220_1282-14207delCACACACACACACA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66685317	GTATGTGT others(7): Show GTATGTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01081.hp2 HG02145.hp1 others(3): Show HG01070.hp1 HG01081.hp2 HG02145.hp1 HG02622.hp2 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0008 a0001c0001t0009 a0001c0001t0021 others(3): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0021 a0001c0003t0008 a0001c0003t0022 a0001c0005t0010	a0001c0001t0008g0004 a0001c0001t0009g0031 a0001c0001t0021g0012 others(3): Show a0001c0001t0008g0004 a0001c0001t0009g0031 a0001c0001t0021g0012 a0001c0003t0008g0002 a0001c0003t0022g0022 a0001c0005t0010g0029	6	46	0.1304	-14	c.128 others(35): Show c.1282-63547_1282-63534delTATATACACACATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66685347	ATATATTT others(7): Show ATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 NA18964.hp2 HG02280.hp2 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0025 a0001c0001t0016 a0001c0001t0025	a0001c0001t0016g0003 a0001c0001t0025g0045 a0001c0001t0016g0003 a0001c0001t0025g0045	2	46	0.0435	-14	c.128 others(35): Show c.1282-63577_1282-63564delAAAAAAAAAATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66685351	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0042 a0002c0002t0003g0042	1	46	0.0217	-14	c.128 others(35): Show c.1282-63581_1282-63568delAAAAAAAAAAAAAA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66749202	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02717.hp2 HG02818.hp2 HG01243.hp1 HG02717.hp2 HG02818.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0006 a0001c0003t0014 a0002c0002t0001 a0001c0001t0006 a0001c0003t0014 a0002c0002t0001	a0001c0001t0006g0027 a0001c0003t0014g0025 a0002c0002t0001g0035 a0001c0001t0006g0027 a0001c0003t0014g0025 a0002c0002t0001g0035	3	46	0.0652	-14	c.128 others(35): Show c.1281+17048_1281+17061delTTTTTTTTTTTTTT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66806756	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03195.hp1 HG01243.hp2 HG03195.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0002 a0001c0007 a0002c0002	a0001c0007t0015 a0002c0002t0005 a0001c0007t0015 a0002c0002t0005	a0001c0007t0015g0016 a0002c0002t0005g0014 a0001c0007t0015g0016 a0002c0002t0005g0014	2	46	0.0435	-14	c.104 others(35): Show c.1048-31246_1048-31233delCACACACACACACA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66840360	TCTCTCTC others(7): Show TCTCTCTCTCTCTCA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0005 a0004c0008t0005	a0004c0008t0005g0033 a0004c0008t0005g0033	1	46	0.0217	-14	c.104 others(35): Show c.1048-64850_1048-64837delTGAGAGAGAGAGAG	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66840368	TCTCTCAC others(7): Show TCTCTCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG03130.hp2 HG01070.hp1 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0021 a0002c0002t0026 a0001c0001t0021 a0002c0002t0026	a0001c0001t0021g0012 a0002c0002t0026g0046 a0001c0001t0021g0012 a0002c0002t0026g0046	2	46	0.0435	-14	c.104 others(35): Show c.1048-64858_1048-64845delTGTGTGTGTGAGAG	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67079858	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02145.hp1 HG02280.hp1 others(10): Show HG01081.hp1 HG02145.hp1 HG02280.hp1 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02922.hp2 HG02965.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 NA18964.hp1 NA19080.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0005c0010	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(10): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0003t0014 a0002c0002t0002 a0002c0002t0003 a0002c0002t0013 a0005c0010t0002	a0001c0001t0002g0024 a0001c0001t0003g0023 a0001c0001t0006g0027 others(10): Show a0001c0001t0002g0024 a0001c0001t0003g0023 a0001c0001t0006g0027 a0001c0001t0008g0004 a0001c0001t0012g0038 a0001c0001t0019g0019 a0001c0001t0020g0030 a0001c0001t0023g0011 a0001c0003t0014g0025 a0002c0002t0002g0013 a0002c0002t0003g0042 a0002c0002t0013g0026 a0005c0010t0002g0021	13	46	0.2826	-14	c.104 others(37): Show c.1047+100445_1047+100458delGTGTGTGTGTGTGT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67237122	GTATGTAT others(7): Show GTATGTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0019 a0001c0001t0019g0019	1	46	0.0217	-14	c.580 others(33): Show c.580-17266_580-17253delTATATATATACATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	5/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67579020	TATATATA others(7): Show TATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18960.hp1 NA18964.hp2 NA19080.hp1 NA18960.hp1 NA18964.hp2 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0024 a0001c0001t0025 a0002c0002t0002 a0001c0001t0024 a0001c0001t0025 a0002c0002t0002	a0001c0001t0024g0044 a0001c0001t0025g0045 a0002c0002t0002g0013 a0001c0001t0024g0044 a0001c0001t0025g0045 a0002c0002t0002g0013	3	46	0.0652	-14	c.292 others(33): Show c.292+27823_292+27836delGTATATATATATAT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	3/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67640166	CAAAATCA others(7): Show CAAAATCAATGTGCA	C C	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0022 a0001c0003t0022	a0001c0003t0022g0022 a0001c0003t0022g0022	1	46	0.0217	-14	c.99+ others(29): Show c.99+7235_99+7248delTGCACATTGATTTT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	2/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67647146	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02145.hp2 HG02818.hp2 others(8): Show HG01243.hp1 HG02145.hp2 HG02818.hp2 HG02965.hp1 HG03130.hp2 HG03195.hp2 HG06807.hp2 NA18612.hp2 NA18960.hp2 NA18964.hp1 NA19080.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0003c0009 a0005c0010	a0001c0001t0004 a0001c0001t0006 a0001c0003t0018 others(6): Show a0001c0001t0004 a0001c0001t0006 a0001c0003t0018 a0002c0002t0001 a0002c0002t0003 a0002c0002t0017 a0002c0002t0026 a0003c0009t0003 a0005c0010t0002	a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0006g0027 others(8): Show a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0006g0027 a0001c0003t0018g0037 a0002c0002t0001g0035 a0002c0002t0003g0039 a0002c0002t0003g0042 a0002c0002t0017g0040 a0002c0002t0026g0046 a0003c0009t0003g0036 a0005c0010t0002g0021	11	46	0.2391	-14	c.99+ others(27): Show c.99+255_99+268delTATATATATATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	2/17			chr10	TogoVar
CTNNAL1_chr9_108937577_109018499	108959364	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0301 a0001c0001t0001g0301	1	420	0.0024	-14	c.159 others(33): Show c.1592-3551_1592-3538delTTTTTTTTTTTTTT	CTNNAL1	ENSG00000119326.15	transcript	ENST00000325551.9	protein_coding	11/18			chr9	TogoVar
CTNNBIP1_chr1_9843276_9915269	9891781	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0097	1	310	0.0032	-14	c.-14 others(33): Show c.-143-8057_-143-8044delAAAAAAAAAAAAAA	CTNNBIP1	ENSG00000178585.15	transcript	ENST00000377263.6	protein_coding	1/5			chr1	TogoVar
CTNNBIP1_chr1_9843276_9915269	9896219	AGAAATTA others(7): Show AGAAATTATGTATCT	A A	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0187 a0001c0001t0006g0187	1	310	0.0032	-14	c.-14 others(35): Show c.-143-12495_-143-12482delAGATACATAATTTC	CTNNBIP1	ENSG00000178585.15	transcript	ENST00000377263.6	protein_coding	1/5			chr1	TogoVar
CTNNBL1_chr20_37689030_37877118	37815071	CTGTGAGT others(7): Show CTGTGAGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0175 a0001c0001t0001g0175	1	266	0.0038	-14	c.121 others(35): Show c.1213+12028_1213+12041delAGTGTGTGTGTGTG	CTNNBL1	ENSG00000132792.21	transcript	ENST00000361383.11	protein_coding	11/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CTNND2_chr5_10966836_11909446	11069659	GAGAGACA others(7): Show GAGAGACAGACAGAC	G G	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	1	26	0.0385	-14	c.278 others(35): Show c.2788+13023_2788+13036delGTCTGTCTGTCTCT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	16/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11181840	ATGTGTGT others(7): Show ATGTGTGTGTGGATG	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02647.hp1 HG03209.hp2 others(4): Show HG02258.hp1 HG02647.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp2 NA18522.hp2 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(2): Show a0001c0001 a0001c0003 a0001c0004 a0001c0009 a0002c0008	a0001c0001t0001 a0001c0003t0001 a0001c0004t0001 others(2): Show a0001c0001t0001 a0001c0003t0001 a0001c0004t0001 a0001c0009t0001 a0002c0008t0001	a0001c0001t0001g0011 a0001c0001t0001g0016 a0001c0001t0001g0018 others(4): Show a0001c0001t0001g0011 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0003t0001g0007 a0001c0004t0001g0019 a0001c0009t0001g0008 a0002c0008t0001g0014	7	26	0.2692	-14	c.197 others(35): Show c.1975+17594_1975+17607delCATCCACACACACA	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	11/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11485372	TGTGCGCG others(7): Show TGTGCGCGCGCGCGC	T T	intron_variant intron_variant	MODIFIER	NA19068.hp1 NA19068.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0001 a0001c0002t0001g0001	1	26	0.0385	-14	c.288 others(33): Show c.288-73317_288-73304delGCGCGCGCGCGCAC	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	3/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11502027	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp2 HG02647.hp2 others(5): Show HG02258.hp1 HG02258.hp2 HG02647.hp2 HG03130.hp1 HG03130.hp2 HG03453.hp1 HG03453.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 a0001c0006t0002	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0003g0026 others(5): Show a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0003g0026 a0001c0002t0001g0013 a0001c0002t0001g0015 a0001c0003t0001g0007 a0001c0005t0001g0020 a0001c0006t0002g0025	8	26	0.3077	-14	c.287 others(33): Show c.287+62903_287+62916delTTTTTTTTTTTTTT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	3/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11653070	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 NA19068.hp2 others(1): Show HG00738.hp1 HG00738.hp2 NA19068.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0003 a0001c0001t0001g0017 a0001c0001t0001g0023 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0007t0001g0002	4	26	0.1539	-14	c.174 others(33): Show c.174+79052_174+79065delACACACACACACAC	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	2/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11816905	AGAGAGAG others(7): Show AGAGAGAGAGAGGAG	A A	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	26	0.0385	-14	c.38- others(31): Show c.38-84647_38-84634delCTCCTCTCTCTCTC	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	1/21			chr5	TogoVar
CTNS_chr17_3631760_3668103	3638226	GTTTTTTT others(7): Show GTTTTTTTTTTGTTT	G G	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0045 a0001c0001t0002g0045	1	372	0.0027	-14	c.-20 others(29): Show c.-20+920_-20+933delTGTTTTTTTTTTTT	CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr17	TogoVar
CTNS_chr17_3631760_3668103	3641374	ATATATAT others(7): Show ATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0038 a0001c0003t0038	a0001c0003t0038g0242 a0001c0003t0038g0242	1	372	0.0027	-14	c.61+ others(29): Show c.61+1109_61+1122delATATATATATTTTT	CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr17	TogoVar
CTPS2_chrX_16582999_16717669	16595162	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	226	0.0044	-14	c.169 others(33): Show c.1692-4314_1692-4301delGTGTGTGTGTGTGT	CTPS2	ENSG00000047230.15	transcript	ENST00000359276.9	protein_coding	17/18			chrX	TogoVar
CTRC_chr1_15433443_15454242	15433516	AGCCGATA others(7): Show AGCCGATATCCATAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0001 a0001c0003t0002	a0001c0003t0001g0014 a0001c0003t0002g0014 a0001c0003t0001g0014 a0001c0003t0002g0014	2	428	0.0047	-14	c.-49 others(25): Show c.-4948_-4935delGCCGATATCCATAG	CTRC	ENSG00000162438.12	transcript	ENST00000375949.5	protein_coding		4926		chr1	TogoVar
CTRC_chr1_15433443_15454242	15434992	CTGTCTTC others(7): Show CTGTCTTCAGCATCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00323.hp2 others(163): Show HG00099.hp1 HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00597.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01884.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02055.hp1 HG02074.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03490.hp2 HG03492.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18960.hp1 NA18964.hp2 NA18966.hp2 NA18971.hp2 NA18974.hp2 NA18975.hp2 NA18978.hp1 NA18979.hp1 NA18980.hp1 NA18981.hp1 NA18982.hp2 NA18984.hp1 NA18986.hp1 NA18990.hp2 NA18995.hp2 NA19000.hp2 NA19001.hp1 NA19003.hp1 NA19003.hp2 NA19007.hp2 NA19011.hp1 NA19012.hp2 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19062.hp2 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp1 NA19079.hp2 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19091.hp2 NA19240.hp2 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0007 a0002c0004 a0003c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0014 a0001c0001t0016 a0001c0001t0019 a0001c0001t0022 a0001c0001t0026 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0002t0003 a0001c0002t0033 a0001c0005t0002 a0001c0007t0002 a0002c0004t0023 a0003c0008t0025	a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0018 others(51): Show a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0038 a0001c0001t0002g0004 a0001c0001t0002g0010 a0001c0001t0002g0013 a0001c0001t0002g0016 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0025 a0001c0001t0002g0030 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0002g0039 a0001c0001t0002g0043 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0052 a0001c0001t0002g0055 a0001c0001t0002g0079 a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0001t0003g0019 a0001c0001t0003g0022 a0001c0001t0003g0040 a0001c0001t0003g0042 a0001c0001t0003g0046 a0001c0001t0006g0004 a0001c0001t0008g0003 a0001c0001t0014g0003 a0001c0001t0016g0004 a0001c0001t0019g0004 a0001c0001t0019g0021 a0001c0001t0022g0045 a0001c0001t0026g0044 a0001c0001t0036g0004 a0001c0001t0037g0049 a0001c0001t0038g0003 a0001c0001t0039g0003 a0001c0002t0003g0003 a0001c0002t0003g0022 a0001c0002t0003g0035 a0001c0002t0003g0051 a0001c0002t0003g0053 a0001c0002t0003g0054 a0001c0002t0033g0003 a0001c0005t0002g0015 a0001c0005t0002g0036 a0001c0007t0002g0004 a0002c0004t0023g0041 a0003c0008t0025g0003	166	428	0.3879	-14	c.-34 others(25): Show c.-3472_-3459delTGTCTTCAGCATCT	CTRC	ENSG00000162438.12	transcript	ENST00000375949.5	protein_coding		3450		chr1	TogoVar
CTSB_chr8_11837524_11873087	11837859	TGGGAGGC others(7): Show TGGGAGGCTTGTGGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0082 a0001c0001t0082	a0001c0001t0082g0317 a0001c0001t0082g0317	1	438	0.0023	-14	c.72 others(25): Show c.7252_*7265delTCCACAAGCCTCCC	CTSB	ENSG00000164733.23	transcript	ENST00000353047.11	protein_coding		4664		chr8	TogoVar
CTSB_chr8_11837524_11873087	11839668	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(144): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00621.hp1 HG00642.hp2 HG00673.hp2 HG00738.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01109.hp2 HG01123.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp2 HG01433.hp1 HG01515.hp2 HG01517.hp1 HG01928.hp1 HG01928.hp2 HG01943.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02074.hp2 HG02129.hp1 HG02132.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02895.hp2 HG02965.hp1 HG02970.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG03704.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18966.hp2 NA18968.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18980.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp2 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp1 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp2 NA19066.hp1 NA19068.hp1 NA19079.hp1 NA19082.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19091.hp1 NA20300.hp2 NA20905.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0006 a0007 a0008 a0013	a0001c0001 a0001c0003 a0001c0004 others(8): Show a0001c0001 a0001c0003 a0001c0004 a0002c0002 a0002c0006 a0003c0009 a0003c0011 a0006c0013 a0007c0014 a0008c0019 a0013c0015	a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 others(37): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0015 a0001c0001t0019 a0001c0001t0027 a0001c0001t0038 a0001c0001t0039 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0074 a0001c0001t0076 a0001c0001t0079 a0001c0001t0080 a0001c0001t0081 a0001c0001t0082 a0001c0001t0086 a0001c0003t0008 a0001c0003t0014 a0001c0003t0025 a0001c0004t0035 a0001c0004t0040 a0001c0004t0078 a0002c0002t0002 a0002c0002t0008 a0002c0002t0010 a0002c0002t0026 a0002c0002t0033 a0002c0002t0075 a0002c0006t0002 a0002c0006t0003 a0002c0006t0096 a0003c0009t0021 a0003c0011t0094 a0006c0013t0002 a0007c0014t0002 a0008c0019t0003 a0013c0015t0002	a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0007 others(130): Show a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0020 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0002g0123 a0001c0001t0002g0126 a0001c0001t0002g0156 a0001c0001t0002g0163 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0187 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0219 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0231 a0001c0001t0002g0233 a0001c0001t0002g0237 a0001c0001t0002g0241 a0001c0001t0002g0247 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0257 a0001c0001t0002g0260 a0001c0001t0002g0262 a0001c0001t0002g0264 a0001c0001t0002g0271 a0001c0001t0002g0278 a0001c0001t0002g0315 a0001c0001t0002g0324 a0001c0001t0002g0342 a0001c0001t0002g0346 a0001c0001t0003g0003 a0001c0001t0003g0024 a0001c0001t0003g0118 a0001c0001t0003g0121 a0001c0001t0003g0124 a0001c0001t0003g0125 a0001c0001t0003g0198 a0001c0001t0003g0217 a0001c0001t0003g0221 a0001c0001t0003g0224 a0001c0001t0003g0229 a0001c0001t0003g0234 a0001c0001t0003g0251 a0001c0001t0003g0258 a0001c0001t0003g0282 a0001c0001t0003g0286 a0001c0001t0003g0287 a0001c0001t0003g0288 a0001c0001t0003g0289 a0001c0001t0003g0291 a0001c0001t0003g0292 a0001c0001t0003g0297 a0001c0001t0003g0304 a0001c0001t0003g0316 a0001c0001t0003g0318 a0001c0001t0003g0319 a0001c0001t0003g0321 a0001c0001t0003g0345 a0001c0001t0003g0361 a0001c0001t0007g0248 a0001c0001t0007g0249 a0001c0001t0007g0263 a0001c0001t0015g0021 a0001c0001t0015g0227 a0001c0001t0015g0232 a0001c0001t0015g0235 a0001c0001t0019g0215 a0001c0001t0019g0296 a0001c0001t0019g0306 a0001c0001t0019g0355 a0001c0001t0027g0122 a0001c0001t0027g0295 a0001c0001t0027g0347 a0001c0001t0038g0293 a0001c0001t0038g0294 a0001c0001t0039g0245 a0001c0001t0039g0308 a0001c0001t0042g0155 a0001c0001t0042g0344 a0001c0001t0043g0129 a0001c0001t0043g0290 a0001c0001t0044g0246 a0001c0001t0045g0019 a0001c0001t0074g0223 a0001c0001t0076g0119 a0001c0001t0079g0061 a0001c0001t0080g0303 a0001c0001t0081g0254 a0001c0001t0082g0317 a0001c0001t0086g0222 a0001c0003t0008g0149 a0001c0003t0008g0176 a0001c0003t0008g0178 a0001c0003t0008g0238 a0001c0003t0014g0152 a0001c0003t0014g0181 a0001c0003t0025g0179 a0001c0003t0025g0180 a0001c0003t0025g0182 a0001c0004t0035g0186 a0001c0004t0040g0351 a0001c0004t0040g0352 a0001c0004t0078g0302 a0002c0002t0002g0033 a0002c0002t0002g0037 a0002c0002t0002g0072 a0002c0002t0008g0055 a0002c0002t0010g0017 a0002c0002t0010g0201 a0002c0002t0026g0273 a0002c0002t0026g0274 a0002c0002t0026g0276 a0002c0002t0033g0356 a0002c0002t0033g0357 a0002c0002t0075g0092 a0002c0006t0002g0011 a0002c0006t0002g0218 a0002c0006t0003g0299 a0002c0006t0096g0373 a0003c0009t0021g0197 a0003c0011t0094g0375 a0006c0013t0002g0285 a0006c0013t0002g0341 a0006c0013t0002g0349 a0007c0014t0002g0190 a0007c0014t0002g0191 a0008c0019t0003g0298 a0013c0015t0002g0310	147	438	0.3356	-14	c.54 others(25): Show c.5443_*5456delTTTTTTTTTTTTTT	CTSB	ENSG00000164733.23	transcript	ENST00000353047.11	protein_coding		2855		chr8	TogoVar
CTSD_chr11_1747755_1768927	1765013	TATATATG others(7): Show TATATATGTATATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp2 NA18941.hp1 NA19060.hp1 others(2): Show HG00609.hp2 NA18941.hp1 NA19060.hp1 NA19060.hp2 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0013 a0001c0002t0001 a0001c0001t0002 a0001c0001t0013 a0001c0002t0001	a0001c0001t0002g0019 a0001c0001t0002g0136 a0001c0001t0002g0137 others(2): Show a0001c0001t0002g0019 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0013g0140 a0001c0002t0001g0075	5	386	0.0130	-14	c.-11 others(25): Show c.-1168_-1155delGTATATACATATAT	CTSD	ENSG00000117984.15	transcript	ENST00000236671.7	protein_coding		1087		chr11	TogoVar
CTSK_chr1_150791208_150813260	150807078	TCTCACAC others(7): Show TCTCACACACACACA	T T	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18979.hp1 NA19076.hp1 NA18962.hp1 NA18979.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054	3	392	0.0077	-14	c.-1- others(27): Show c.-1-286_-1-273delTGTGTGTGTGTGAG	CTSK	ENSG00000143387.14	transcript	ENST00000271651.8	protein_coding	1/7			chr1	TogoVar
CTSL_chr9_87721119_87736469	87734804	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG02273.hp2 HG02572.hp1 others(3): Show HG00323.hp2 HG02273.hp2 HG02572.hp1 HG02647.hp1 HG04204.hp1 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0002t0001g0001	6	388	0.0155	-14	c.36 others(25): Show c.3698_*3711delTTTTTTTTTTTTTT	CTSL	ENSG00000135047.16	transcript	ENST00000343150.10	protein_coding		3336		chr9	TogoVar
CTSS_chr1_150725188_150770778	150726447	TACACACA others(7): Show TACACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0217 a0001c0001t0003g0223 a0001c0001t0003g0230 a0001c0001t0003g0217 a0001c0001t0003g0223 a0001c0001t0003g0230	3	344	0.0087	-14	c.65 others(25): Show c.6585_*6598delGTGTGTGTGTGTGT	CTSS	ENSG00000163131.12	transcript	ENST00000368985.8	protein_coding		3740		chr1	TogoVar

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