Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AGBL1_chr15_86074871_86921156	86196865	ATGTGCGC others(7): Show ATGTGCGCGCGCGCG	A A	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02922.hp1 HG06807.hp2 HG02895.hp2 HG02922.hp1 HG06807.hp2	a0004 a0006 a0015 a0004 a0006 a0015	a0004c0009 a0006c0014 a0015c0028 a0004c0009 a0006c0014 a0015c0028	a0004c0009t0017 a0006c0014t0054 a0015c0028t0013 a0004c0009t0017 a0006c0014t0054 a0015c0028t0013	a0004c0009t0017g0008 a0006c0014t0054g0021 a0015c0028t0013g0131 a0004c0009t0017g0008 a0006c0014t0054g0021 a0015c0028t0013g0131	3	132	0.0227	-14	c.489 others(33): Show c.489-28048_489-28035delTGTGCGCGCGCGCG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	5/22			chr15	TogoVar
AGBL1_chr15_86074871_86921156	86215224	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG03139.hp2 HG03453.hp2 others(3): Show HG02896.hp1 HG03139.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp2 NA20129.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0001 a0001c0007 a0001c0010 others(3): Show a0001c0001 a0001c0007 a0001c0010 a0002c0005 a0004c0031 a0005c0016	a0001c0001t0001 a0001c0007t0021 a0001c0010t0001 others(3): Show a0001c0001t0001 a0001c0007t0021 a0001c0010t0001 a0002c0005t0055 a0004c0031t0015 a0005c0016t0037	a0001c0001t0001g0109 a0001c0007t0021g0096 a0001c0010t0001g0119 others(3): Show a0001c0001t0001g0109 a0001c0007t0021g0096 a0001c0010t0001g0119 a0002c0005t0055g0033 a0004c0031t0015g0104 a0005c0016t0037g0049	6	132	0.0455	-14	c.489 others(31): Show c.489-9662_489-9649delTGTGTGTGTGTGTG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	5/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86250525	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0008 a0008	a0008c0030 a0008c0030	a0008c0030t0010 a0008c0030t0010	a0008c0030t0010g0002 a0008c0030t0010g0002	1	132	0.0076	-14	c.735 others(31): Show c.735+2681_735+2694delAAAAAAAAAAAAAA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86301641	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA18979.hp1 HG02145.hp1 NA18979.hp1	a0001 a0001	a0001c0032 a0001c0057 a0001c0032 a0001c0057	a0001c0032t0009 a0001c0057t0001 a0001c0032t0009 a0001c0057t0001	a0001c0032t0009g0108 a0001c0057t0001g0067 a0001c0032t0009g0108 a0001c0057t0001g0067	2	132	0.0152	-14	c.237 others(33): Show c.2374+6273_2374+6286delTGTGTGTGTGTGTG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86319743	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00423.hp1 HG00735.hp2 others(27): Show HG00323.hp1 HG00423.hp1 HG00735.hp2 HG00738.hp1 HG01074.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01978.hp2 HG02257.hp1 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02698.hp1 HG02735.hp1 HG02976.hp1 HG03239.hp2 HG03579.hp2 HG03710.hp2 HG03834.hp1 HG04204.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18944.hp2 NA18994.hp2 NA19002.hp1 NA19002.hp2 NA19012.hp2 NA20300.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0007 a0009 a0014 a0020 a0022	a0001c0002 a0001c0007 a0001c0012 others(13): Show a0001c0002 a0001c0007 a0001c0012 a0001c0013 a0001c0015 a0001c0053 a0002c0005 a0002c0018 a0002c0021 a0003c0026 a0003c0040 a0007c0039 a0009c0037 a0014c0043 a0020c0061 a0022c0049	a0001c0002t0002 a0001c0002t0006 a0001c0002t0016 others(26): Show a0001c0002t0002 a0001c0002t0006 a0001c0002t0016 a0001c0002t0027 a0001c0002t0062 a0001c0007t0029 a0001c0007t0044 a0001c0012t0014 a0001c0012t0042 a0001c0013t0005 a0001c0013t0014 a0001c0015t0058 a0001c0053t0008 a0002c0005t0006 a0002c0005t0024 a0002c0005t0050 a0002c0005t0060 a0002c0005t0061 a0002c0018t0001 a0002c0018t0007 a0002c0021t0001 a0002c0021t0019 a0003c0026t0023 a0003c0040t0004 a0007c0039t0023 a0009c0037t0004 a0014c0043t0001 a0020c0061t0001 a0022c0049t0048	a0001c0002t0002g0010 a0001c0002t0002g0127 a0001c0002t0006g0003 others(27): Show a0001c0002t0002g0010 a0001c0002t0002g0127 a0001c0002t0006g0003 a0001c0002t0016g0004 a0001c0002t0027g0082 a0001c0002t0062g0031 a0001c0007t0029g0115 a0001c0007t0044g0114 a0001c0012t0014g0056 a0001c0012t0042g0063 a0001c0013t0005g0118 a0001c0013t0014g0122 a0001c0015t0058g0027 a0001c0053t0008g0012 a0002c0005t0006g0103 a0002c0005t0024g0039 a0002c0005t0050g0036 a0002c0005t0060g0015 a0002c0005t0061g0028 a0002c0018t0001g0074 a0002c0018t0007g0037 a0002c0021t0001g0059 a0002c0021t0019g0065 a0003c0026t0023g0050 a0003c0040t0004g0089 a0007c0039t0023g0020 a0009c0037t0004g0043 a0014c0043t0001g0121 a0020c0061t0001g0066 a0022c0049t0048g0013	30	132	0.2273	-14	c.237 others(35): Show c.2374+24358_2374+24371delTTTTTTTTTTTTTT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86365028	CACACACA others(7): Show CACACACATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02615.hp1 HG02559.hp2 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0052 a0001c0001 a0001c0052	a0001c0001t0003 a0001c0052t0026 a0001c0001t0003 a0001c0052t0026	a0001c0001t0003g0097 a0001c0052t0026g0126 a0001c0001t0003g0097 a0001c0052t0026g0126	2	132	0.0152	-14	c.237 others(35): Show c.2375-32318_2375-32305delCATATATATACACA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86365048	CATATATA others(7): Show CATATATATACACAT	C C	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0008 a0008	a0008c0030 a0008c0030	a0008c0030t0010 a0008c0030t0010	a0008c0030t0010g0002 a0008c0030t0010g0002	1	132	0.0076	-14	c.237 others(35): Show c.2375-32304_2375-32291delTATATATATACACA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86410807	GATATATA others(7): Show GATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0006 a0002c0005t0006	a0002c0005t0006g0103 a0002c0005t0006g0103	1	132	0.0076	-14	c.255 others(35): Show c.2555+13283_2555+13296delTATATATATATATA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86526561	TATATATA others(7): Show TATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0003 a0003	a0003c0029 a0003c0029	a0003c0029t0018 a0003c0029t0018	a0003c0029t0018g0007 a0003c0029t0018g0007	1	132	0.0076	-14	c.268 others(33): Show c.2685+3624_2685+3637delTATATATATATACA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	19/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86526563	TATATATA others(7): Show TATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01884.hp1 HG02451.hp1 others(6): Show HG01346.hp2 HG01884.hp1 HG02451.hp1 HG02559.hp2 HG02647.hp2 HG03209.hp1 HG03540.hp1 NA18906.hp1 NA19030.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0001c0007 others(3): Show a0001c0001 a0001c0002 a0001c0007 a0001c0010 a0001c0052 a0008c0058	a0001c0001t0001 a0001c0002t0001 a0001c0002t0011 others(6): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0011 a0001c0007t0029 a0001c0007t0038 a0001c0007t0044 a0001c0010t0067 a0001c0052t0026 a0008c0058t0010	a0001c0001t0001g0111 a0001c0002t0001g0128 a0001c0002t0011g0005 others(6): Show a0001c0001t0001g0111 a0001c0002t0001g0128 a0001c0002t0011g0005 a0001c0007t0029g0115 a0001c0007t0038g0129 a0001c0007t0044g0114 a0001c0010t0067g0069 a0001c0052t0026g0126 a0008c0058t0010g0053	9	132	0.0682	-14	c.268 others(33): Show c.2685+3626_2685+3639delTATATATATACACA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	19/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86566121	GCTGCACT others(7): Show GCTGCACTCACTGTC	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02145.hp2 HG02257.hp2 others(5): Show HG01243.hp2 HG02145.hp2 HG02257.hp2 HG02559.hp1 HG02922.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp2	a0001 a0004 a0016 others(1): Show a0001 a0004 a0016 a0019	a0001c0002 a0001c0010 a0001c0042 others(4): Show a0001c0002 a0001c0010 a0001c0042 a0001c0055 a0004c0009 a0016c0054 a0019c0027	a0001c0002t0016 a0001c0010t0015 a0001c0042t0005 others(4): Show a0001c0002t0016 a0001c0010t0015 a0001c0042t0005 a0001c0055t0009 a0004c0009t0017 a0016c0054t0010 a0019c0027t0032	a0001c0002t0016g0001 a0001c0002t0016g0004 a0001c0010t0015g0009 others(5): Show a0001c0002t0016g0001 a0001c0002t0016g0004 a0001c0010t0015g0009 a0001c0042t0005g0092 a0001c0055t0009g0064 a0004c0009t0017g0008 a0016c0054t0010g0061 a0019c0027t0032g0116	8	132	0.0606	-14	c.299 others(35): Show c.2994+11591_2994+11604delTCACTGTCCTGCAC	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	21/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86625371	TTTTTTTT others(7): Show TTTTTTTTGTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02647.hp1 HG02896.hp1 others(3): Show HG00544.hp2 HG02647.hp1 HG02896.hp1 HG03139.hp1 HG03486.hp1 NA20300.hp2	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0010	a0001c0001 a0001c0012 a0004c0009 others(2): Show a0001c0001 a0001c0012 a0004c0009 a0005c0016 a0010c0017	a0001c0001t0001 a0001c0012t0041 a0004c0009t0003 others(3): Show a0001c0001t0001 a0001c0012t0041 a0004c0009t0003 a0004c0009t0066 a0005c0016t0037 a0010c0017t0012	a0001c0001t0001g0107 a0001c0012t0041g0062 a0004c0009t0003g0095 others(3): Show a0001c0001t0001g0107 a0001c0012t0041g0062 a0004c0009t0003g0095 a0004c0009t0066g0019 a0005c0016t0037g0049 a0010c0017t0012g0090	6	132	0.0455	-14	c.299 others(35): Show c.2995-48894_2995-48881delGTTTTTGTTTTTTT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	21/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86700498	CACACACA others(7): Show CACACACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02602.hp1 HG00423.hp2 HG02602.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0060 a0001c0001 a0002c0060	a0001c0001t0001 a0002c0060t0004 a0001c0001t0001 a0002c0060t0004	a0001c0001t0001g0076 a0002c0060t0004g0072 a0001c0001t0001g0076 a0002c0060t0004g0072	2	132	0.0152	-14	c.315 others(35): Show c.3158+26064_3158+26077delCACACACACACAAA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86704932	CCATGGAA others(7): Show CCATGGAATACTATG	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	132	0.0076	-14	c.315 others(35): Show c.3158+30499_3158+30512delTGGAATACTATGCA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86741381	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp1 NA18979.hp2 HG00735.hp2 HG00738.hp1 NA18979.hp2	a0001 a0020 a0022 a0001 a0020 a0022	a0001c0003 a0020c0061 a0022c0049 a0001c0003 a0020c0061 a0022c0049	a0001c0003t0057 a0020c0061t0001 a0022c0049t0048 a0001c0003t0057 a0020c0061t0001 a0022c0049t0048	a0001c0003t0057g0038 a0020c0061t0001g0066 a0022c0049t0048g0013 a0001c0003t0057g0038 a0020c0061t0001g0066 a0022c0049t0048g0013	3	132	0.0227	-14	c.315 others(35): Show c.3158+66972_3158+66985delAAAAAAAAAAAAAA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86748510	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20300.hp2 NA20129.hp1 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0056 a0004c0009 a0001c0056 a0004c0009	a0001c0056t0031 a0004c0009t0003 a0001c0056t0031 a0004c0009t0003	a0001c0056t0031g0055 a0004c0009t0003g0095 a0001c0056t0031g0055 a0004c0009t0003g0095	2	132	0.0152	-14	c.315 others(35): Show c.3158+74097_3158+74110delTTTTTTTTTTTTTT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86776750	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG02717.hp2 HG02976.hp1 others(7): Show HG01978.hp2 HG02717.hp2 HG02976.hp1 HG03209.hp1 HG03471.hp1 HG03540.hp1 HG03579.hp2 NA18522.hp1 NA19030.hp1 NA20300.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0007 others(5): Show a0001c0001 a0001c0002 a0001c0007 a0001c0010 a0001c0015 a0002c0005 a0003c0026 a0007c0039	a0001c0001t0001 a0001c0002t0001 a0001c0007t0038 others(7): Show a0001c0001t0001 a0001c0002t0001 a0001c0007t0038 a0001c0010t0015 a0001c0015t0003 a0002c0005t0055 a0002c0005t0060 a0002c0005t0061 a0003c0026t0023 a0007c0039t0023	a0001c0001t0001g0111 a0001c0002t0001g0128 a0001c0007t0038g0129 others(7): Show a0001c0001t0001g0111 a0001c0002t0001g0128 a0001c0007t0038g0129 a0001c0010t0015g0009 a0001c0015t0003g0098 a0002c0005t0055g0033 a0002c0005t0060g0015 a0002c0005t0061g0028 a0003c0026t0023g0050 a0007c0039t0023g0020	10	132	0.0758	-14	c.315 others(37): Show c.3158+102341_3158+102354delTGTGTGTGTGTGTG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86827475	ATATATAT others(7): Show ATATATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02922.hp2 HG03209.hp2 others(3): Show HG01884.hp2 HG02922.hp2 HG03209.hp2 HG03540.hp1 HG03654.hp2 NA19030.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0055 a0003c0011 a0004c0020	a0001c0001t0003 a0001c0002t0001 a0001c0003t0056 others(3): Show a0001c0001t0003 a0001c0002t0001 a0001c0003t0056 a0001c0055t0009 a0003c0011t0003 a0004c0020t0012	a0001c0001t0003g0113 a0001c0002t0001g0128 a0001c0003t0056g0026 others(3): Show a0001c0001t0003g0113 a0001c0002t0001g0128 a0001c0003t0056g0026 a0001c0055t0009g0064 a0003c0011t0003g0105 a0004c0020t0012g0073	6	132	0.0455	-14	c.315 others(35): Show c.3159-79602_3159-79589delGTGTGTATATATAT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL2_chr11_47654591_47720369	47657721	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0208 a0001c0001t0001g0208	1	356	0.0028	-14	c.24 others(25): Show c.2438_*2451delAAAAAAAAAAAAAA	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding		1869		chr11	TogoVar
AGBL2_chr11_47654591_47720369	47706890	CCAAAAAA others(7): Show CCAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA19065.hp1 NA19089.hp1 NA18949.hp2 NA19065.hp1 NA19089.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0022 a0002c0002t0002g0023 a0002c0002t0002g0024 a0002c0002t0002g0022 a0002c0002t0002g0023 a0002c0002t0002g0024	3	356	0.0084	-14	c.233 others(29): Show c.233-987_233-974delTTTTTTTTTTTTTG	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding	4/18			chr11	TogoVar
AGBL2_chr11_47654591_47720369	47719576	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00438.hp2 others(29): Show HG00280.hp1 HG00323.hp2 HG00438.hp2 HG00642.hp1 HG00741.hp2 HG01070.hp1 HG01081.hp2 HG01123.hp2 HG01169.hp2 HG01192.hp1 HG01255.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01943.hp1 HG02004.hp2 HG02071.hp1 HG02300.hp2 HG02602.hp2 HG02630.hp2 HG02717.hp1 HG02738.hp1 HG02965.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03654.hp1 HG03710.hp1 NA18991.hp1 NA19030.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0037 a0001c0001t0001g0063 a0002c0002t0001g0004 others(29): Show a0001c0001t0001g0037 a0001c0001t0001g0063 a0002c0002t0001g0004 a0002c0002t0001g0006 a0002c0002t0001g0007 a0002c0002t0001g0009 a0002c0002t0001g0010 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0016 a0002c0002t0002g0017 a0002c0002t0002g0025 a0002c0002t0002g0026 a0002c0002t0002g0027 a0002c0002t0002g0033 a0002c0002t0002g0038 a0002c0002t0002g0039 a0002c0002t0002g0040 a0002c0002t0002g0041 a0002c0002t0002g0042 a0002c0002t0002g0043 a0002c0002t0002g0044 a0002c0002t0002g0045 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0049 a0002c0002t0002g0050 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0057 a0002c0002t0002g0058 a0002c0002t0002g0117	32	356	0.0899	-14	c.-45 others(25): Show c.-4516_-4503delCACACACACACACA	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding		4208		chr11	TogoVar
AGBL3_chr7_134981508_135140778	135006202	CTTTTATT others(7): Show CTTTTATTTTTTTAT	C C	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0051 a0002c0002t0002g0051	1	320	0.0031	-14	c.311 others(33): Show c.311-10837_311-10824delATTTTTATTTTTTT	AGBL3	ENSG00000146856.14	transcript	ENST00000436302.6	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGBL4_chr1_48527854_50028954	48597799	AAGAGAAA others(7): Show AAGAGAAAGAAAGAG	A A	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	104	0.0096	-14	c.952 others(31): Show c.952-6828_952-6815delCTCTTTCTTTCTCT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	9/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	48837709	CACTATAT others(7): Show CACTATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01943.hp1 HG02451.hp1 others(10): Show HG00639.hp1 HG01943.hp1 HG02451.hp1 HG02572.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02896.hp1 HG02976.hp1 HG03453.hp2 NA18906.hp1 NA20129.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0004 a0002c0003 others(2): Show a0001c0001 a0001c0004 a0002c0003 a0003c0005 a0004c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0014 a0001c0004t0003 a0002c0003t0001 a0002c0003t0007 a0003c0005t0001 a0004c0009t0004	a0001c0001t0001g0014 a0001c0001t0001g0068 a0001c0001t0001g0083 others(10): Show a0001c0001t0001g0014 a0001c0001t0001g0068 a0001c0001t0001g0083 a0001c0001t0002g0022 a0001c0001t0004g0065 a0001c0001t0007g0021 a0001c0001t0014g0063 a0001c0004t0003g0062 a0001c0004t0003g0064 a0002c0003t0001g0015 a0002c0003t0007g0061 a0003c0005t0001g0060 a0004c0009t0004g0020	13	104	0.1250	-14	c.634 others(33): Show c.634+29468_634+29481delTATATATATATAGT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	6/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	48935958	GAAAAAAA others(7): Show GAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0098 a0001c0001t0007g0098	1	104	0.0096	-14	c.595 others(33): Show c.595-68742_595-68729delTTTTTTTTTTTTTT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	5/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	48980718	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02622.hp1 HG02132.hp1 HG02622.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0005 a0001c0002 a0003c0005	a0001c0002t0001 a0003c0005t0001 a0001c0002t0001 a0003c0005t0001	a0001c0002t0001g0033 a0003c0005t0001g0060 a0001c0002t0001g0033 a0003c0005t0001g0060	2	104	0.0192	-14	c.594 others(33): Show c.594+64852_594+64865delATATATATATATAT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	5/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49237512	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	104	0.0096	-14	c.377 others(31): Show c.377+8244_377+8257delTATATATATATATA	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	4/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49371817	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0098 a0001c0001t0007g0098	1	104	0.0096	-14	c.283 others(35): Show c.283-125967_283-125954delCACACACACACACA	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	3/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49454728	AGTGAGTA others(7): Show AGTGAGTATAACGTG	A A	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0098 a0001c0001t0007g0098	1	104	0.0096	-14	c.283 others(35): Show c.283-208878_283-208865delCACGTTATACTCAC	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	3/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	49603929	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02630.hp1 HG03453.hp2 HG02572.hp1 HG02630.hp1 HG03453.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0009 a0001c0001 a0004c0009	a0001c0001t0002 a0001c0001t0007 a0004c0009t0004 a0001c0001t0002 a0001c0001t0007 a0004c0009t0004	a0001c0001t0002g0022 a0001c0001t0007g0021 a0004c0009t0004g0020 a0001c0001t0002g0022 a0001c0001t0007g0021 a0004c0009t0004g0020	3	104	0.0289	-14	c.282 others(33): Show c.282+93370_282+93383delGTGTGTGTGTGTGT	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	3/13			chr1	TogoVar
AGBL4_chr1_48527854_50028954	50022614	CCACACAC others(7): Show CCACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0001 a0001c0001t0016g0001	1	104	0.0096	-14	c.34+ others(29): Show c.34+1135_34+1148delTGTGTGTGTGTGTG	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGFG1_chr2_227467156_227566217	227484677	GTTTTTTT others(7): Show GTTTTTTTTTTGTTT	G G	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02559.hp2 HG02622.hp1 others(3): Show HG01081.hp2 HG02559.hp2 HG02622.hp1 HG02895.hp2 HG02897.hp1 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0018 a0001c0001t0023 a0001c0001t0008 a0001c0001t0018 a0001c0001t0023	a0001c0001t0008g0020 a0001c0001t0008g0030 a0001c0001t0018g0024 others(3): Show a0001c0001t0008g0020 a0001c0001t0008g0030 a0001c0001t0018g0024 a0001c0001t0018g0025 a0001c0001t0023g0017 a0001c0001t0023g0021	6	328	0.0183	-14	c.168 others(31): Show c.168-6859_168-6846delGTTTTTTTTTTTTT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227497730	GTTTTGTT others(7): Show GTTTTGTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02451.hp1 HG02129.hp1 HG02451.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0006 a0001c0004t0042 a0001c0004t0006 a0001c0004t0042	a0001c0004t0006g0033 a0001c0004t0042g0032 a0001c0004t0006g0033 a0001c0004t0042g0032	2	328	0.0061	-14	c.261 others(31): Show c.261+6095_261+6108delGTTTTTTTTTTTTT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227564267	GGAGGGTG others(7): Show GGAGGGTGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG02109.hp1 HG02602.hp2 others(9): Show HG01891.hp2 HG02109.hp1 HG02602.hp2 HG03195.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG04228.hp1 NA18906.hp1 NA18948.hp2 NA18949.hp2 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0015 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0015 a0001c0001t0038	a0001c0001t0001g0003 a0001c0001t0001g0124 a0001c0001t0001g0145 others(9): Show a0001c0001t0001g0003 a0001c0001t0001g0124 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0153 a0001c0001t0001g0177 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0004g0003 a0001c0001t0015g0239 a0001c0001t0015g0240 a0001c0001t0038g0113	12	328	0.0366	-14	c.97 others(25): Show c.9773_*9786delGAGGGTGTGTGTGT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding		3051		chr2	TogoVar
AGFG2_chr7_100534203_100573220	100569655	GGACCGCA others(7): Show GGACCGCAGTCAGCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	246	0.0041	-14	c.46 others(25): Show c.4665_*4678delGACCGCAGTCAGCT	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding		1436		chr7	TogoVar
AGFG2_chr7_100534203_100573220	100570843	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG03942.hp1 HG02818.hp2 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0182 a0001c0001t0001g0199 a0001c0001t0001g0182 a0001c0001t0001g0199	2	246	0.0081	-14	c.58 others(25): Show c.5853_*5866delAAAAAAAAAAAAAA	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding		2624		chr7	TogoVar
AGL_chr1_99845361_99929020	99882142	AAAAAAAA others(7): Show AAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00438.hp2 others(171): Show HG00408.hp1 HG00423.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01496.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02080.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp2 HG02293.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp2 HG03688.hp2 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18948.hp1 NA18949.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp2 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18967.hp1 NA18967.hp2 NA18968.hp2 NA18970.hp2 NA18971.hp1 NA18972.hp2 NA18973.hp2 NA18980.hp1 NA18981.hp1 NA18983.hp2 NA18989.hp2 NA18994.hp1 NA18994.hp2 NA18999.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19076.hp2 NA19081.hp2 NA19088.hp1 NA19091.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp1 NA21309.hp2	a0001 a0002 a0004 others(13): Show a0001 a0002 a0004 a0006 a0007 a0008 a0009 a0010 a0011 a0014 a0016 a0017 a0018 a0020 a0023 a0024	a0001c0001 a0001c0002 a0001c0014 others(19): Show a0001c0001 a0001c0002 a0001c0014 a0002c0003 a0002c0007 a0004c0005 a0004c0018 a0006c0008 a0007c0009 a0007c0024 a0008c0010 a0009c0013 a0009c0032 a0010c0012 a0011c0011 a0014c0030 a0016c0028 a0017c0027 a0018c0026 a0020c0029 a0023c0016 a0024c0034	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(34): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0017 a0001c0002t0005 a0001c0002t0008 a0001c0014t0016 a0002c0003t0005 a0002c0003t0006 a0002c0003t0021 a0002c0007t0002 a0002c0007t0005 a0002c0007t0006 a0004c0005t0002 a0004c0005t0003 a0004c0018t0005 a0006c0008t0007 a0006c0008t0008 a0007c0009t0004 a0007c0024t0015 a0008c0010t0010 a0009c0013t0004 a0009c0032t0004 a0010c0012t0006 a0011c0011t0014 a0014c0030t0006 a0016c0028t0002 a0017c0027t0013 a0018c0026t0009 a0020c0029t0013 a0023c0016t0023 a0024c0034t0005	a0001c0001t0001g0010 a0001c0001t0001g0212 a0001c0001t0001g0213 others(159): Show a0001c0001t0001g0010 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0245 a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0106 a0001c0001t0002g0108 a0001c0001t0002g0111 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0120 a0001c0001t0002g0128 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0155 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0297 a0001c0001t0003g0012 a0001c0001t0003g0115 a0001c0001t0003g0121 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0223 a0001c0001t0003g0224 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0227 a0001c0001t0003g0232 a0001c0001t0003g0235 a0001c0001t0003g0237 a0001c0001t0003g0238 a0001c0001t0003g0239 a0001c0001t0003g0243 a0001c0001t0003g0248 a0001c0001t0005g0252 a0001c0001t0007g0207 a0001c0001t0007g0229 a0001c0001t0007g0231 a0001c0001t0007g0233 a0001c0001t0007g0234 a0001c0001t0007g0240 a0001c0001t0008g0260 a0001c0001t0009g0104 a0001c0001t0009g0105 a0001c0001t0011g0112 a0001c0001t0011g0176 a0001c0001t0011g0228 a0001c0001t0017g0129 a0001c0001t0017g0130 a0001c0002t0005g0041 a0001c0002t0008g0051 a0001c0014t0016g0127 a0001c0014t0016g0157 a0002c0003t0005g0019 a0002c0003t0005g0024 a0002c0003t0005g0029 a0002c0003t0005g0031 a0002c0003t0005g0033 a0002c0003t0005g0034 a0002c0003t0005g0035 a0002c0003t0005g0036 a0002c0003t0005g0038 a0002c0003t0005g0039 a0002c0003t0005g0040 a0002c0003t0005g0052 a0002c0003t0005g0054 a0002c0003t0005g0092 a0002c0003t0005g0100 a0002c0003t0005g0103 a0002c0003t0006g0046 a0002c0003t0006g0047 a0002c0003t0006g0048 a0002c0003t0006g0049 a0002c0003t0006g0050 a0002c0003t0006g0055 a0002c0003t0006g0057 a0002c0003t0006g0095 a0002c0003t0021g0043 a0002c0007t0002g0003 a0002c0007t0002g0146 a0002c0007t0002g0147 a0002c0007t0002g0148 a0002c0007t0005g0279 a0002c0007t0005g0287 a0002c0007t0005g0290 a0002c0007t0006g0269 a0004c0005t0002g0107 a0004c0005t0002g0109 a0004c0005t0002g0110 a0004c0005t0002g0113 a0004c0005t0002g0114 a0004c0005t0002g0122 a0004c0005t0002g0123 a0004c0005t0002g0124 a0004c0005t0002g0125 a0004c0005t0002g0141 a0004c0005t0002g0154 a0004c0005t0002g0158 a0004c0005t0002g0162 a0004c0005t0002g0163 a0004c0005t0002g0164 a0004c0005t0002g0167 a0004c0005t0002g0171 a0004c0005t0002g0173 a0004c0005t0003g0119 a0004c0005t0003g0165 a0004c0005t0003g0166 a0004c0018t0005g0032 a0006c0008t0007g0230 a0006c0008t0007g0241 a0006c0008t0008g0016 a0006c0008t0008g0203 a0007c0009t0004g0037 a0007c0009t0004g0053 a0007c0009t0004g0075 a0007c0024t0015g0236 a0008c0010t0010g0208 a0008c0010t0010g0209 a0008c0010t0010g0210 a0009c0013t0004g0017 a0009c0013t0004g0045 a0009c0032t0004g0216 a0010c0012t0006g0006 a0011c0011t0014g0204 a0011c0011t0014g0247 a0014c0030t0006g0274 a0016c0028t0002g0249 a0017c0027t0013g0202 a0018c0026t0009g0211 a0020c0029t0013g0214 a0023c0016t0023g0205 a0024c0034t0005g0198	174	318	0.5472	-14	c.230 others(31): Show c.2308+455_2308+468delAAAAAAAAAAGAAA	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	17/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGMAT_chr1_15566699_15590051	15576740	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0003	a0002c0001t0003g0259 a0002c0001t0003g0259	1	390	0.0026	-14	c.900 others(29): Show c.900+931_900+944delAAAAAAAAAAAAAA	AGMAT	ENSG00000116771.6	transcript	ENST00000375826.4	protein_coding	5/6			chr1	TogoVar
AGMO_chr7_15195317_15567015	15198196	CGAGAGAG others(7): Show CGAGAGAGAGAGAGA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp1 HG02080.hp1 NA18951.hp2 HG01496.hp1 HG02080.hp1 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0101 a0001c0001t0001g0159 a0001c0001t0001g0093 a0001c0001t0001g0101 a0001c0001t0001g0159	3	236	0.0127	-14	c.30 others(25): Show c.3075_*3088delTCTCTCTCTCTCTC	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding		2120		chr7	TogoVar
AGMO_chr7_15195317_15567015	15198243	GAGAGAGA others(7): Show GAGAGAGAGAGAGAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03669.hp2 NA21309.hp1 HG03669.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0109 a0001c0001t0002g0107 a0001c0001t0001g0109 a0001c0001t0002g0107	2	236	0.0085	-14	c.30 others(25): Show c.3028_*3041delGTCTCTCTCTCTCT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding		2073		chr7	TogoVar
AGMO_chr7_15195317_15567015	15202458	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02976.hp2 HG06807.hp1 others(1): Show HG00639.hp1 HG02976.hp2 HG06807.hp1 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0007 a0003c0006 a0001c0001 a0001c0007 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0007t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0007t0001 a0003c0006t0001	a0001c0001t0001g0186 a0001c0001t0002g0088 a0001c0007t0001g0017 others(1): Show a0001c0001t0001g0186 a0001c0001t0002g0088 a0001c0007t0001g0017 a0003c0006t0001g0187	4	236	0.0170	-14	c.126 others(33): Show c.1264-1113_1264-1100delTTTTTTTTTTTTTT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15202476	AAAAAAAA others(7): Show AAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0181 a0003c0006t0001g0181	1	236	0.0042	-14	c.126 others(33): Show c.1264-1131_1264-1118delGTTTTTTTTTTTTT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15245575	GCACCATA others(7): Show GCACCATAAATATTC	G G	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0004 a0002c0004t0004	a0002c0004t0004g0011 a0002c0004t0004g0011	1	236	0.0042	-14	c.126 others(35): Show c.1264-44230_1264-44217delGAATATTTATGGTG	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15248179	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03579.hp2 HG03669.hp2 HG02809.hp1 HG03579.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0065 a0001c0001t0001g0109 a0001c0001t0005g0049 a0001c0001t0001g0065 a0001c0001t0001g0109 a0001c0001t0005g0049	3	236	0.0127	-14	c.126 others(35): Show c.1264-46834_1264-46821delATATATATATATAT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15270596	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0024 a0002c0002t0004g0024	1	236	0.0042	-14	c.126 others(35): Show c.1264-69251_1264-69238delAAAAAAAAAAAAAA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15299830	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0082 a0001c0001t0001g0082	1	236	0.0042	-14	c.126 others(35): Show c.1263+65670_1263+65683delGTGTGTGTGTGTGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15322533	TAAATATA others(7): Show TAAATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02647.hp1 HG02723.hp2 others(4): Show HG02055.hp1 HG02647.hp1 HG02723.hp2 HG02809.hp2 HG02896.hp2 HG02976.hp1 NA21309.hp2	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0016	a0001c0001 a0001c0005 a0002c0004 others(2): Show a0001c0001 a0001c0005 a0002c0004 a0010c0021 a0016c0022	a0001c0001t0001 a0001c0001t0003 a0001c0005t0003 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0005t0003 a0002c0004t0003 a0010c0021t0001 a0016c0022t0004	a0001c0001t0001g0198 a0001c0001t0003g0043 a0001c0001t0003g0215 others(4): Show a0001c0001t0001g0198 a0001c0001t0003g0043 a0001c0001t0003g0215 a0001c0005t0003g0001 a0002c0004t0003g0012 a0010c0021t0001g0042 a0016c0022t0004g0020	7	236	0.0297	-14	c.126 others(35): Show c.1263+42967_1263+42980delTTATATATATATTT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15351669	AATGACAT others(7): Show AATGACATGTTCATG	A A	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0104 a0001c0001t0002g0104	1	236	0.0042	-14	c.126 others(35): Show c.1263+13831_1263+13844delCATGAACATGTCAT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15354313	CGCGTGTA others(7): Show CGCGTGTATATACGT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01109.hp2 HG02040.hp2 others(9): Show HG01106.hp1 HG01109.hp2 HG02040.hp2 HG02056.hp1 HG02155.hp1 HG02559.hp2 HG02970.hp2 HG03098.hp1 NA18951.hp1 NA19009.hp1 NA19009.hp2 NA21309.hp1	a0001 a0012 a0001 a0012	a0001c0001 a0001c0018 a0012c0015 a0001c0001 a0001c0018 a0012c0015	a0001c0001t0001 a0001c0001t0002 a0001c0018t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0018t0001 a0012c0015t0006	a0001c0001t0001g0072 a0001c0001t0001g0087 a0001c0001t0001g0089 others(9): Show a0001c0001t0001g0072 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0126 a0001c0001t0001g0143 a0001c0001t0002g0079 a0001c0001t0002g0094 a0001c0001t0002g0104 a0001c0001t0002g0107 a0001c0001t0002g0123 a0001c0018t0001g0191 a0012c0015t0006g0230	12	236	0.0509	-14	c.126 others(35): Show c.1263+11187_1263+11200delACGTATATACACGC	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15354441	CACACGTG others(7): Show CACACGTGTGTGTAT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00423.hp2 others(20): Show HG00280.hp1 HG00323.hp2 HG00423.hp2 HG01070.hp1 HG01081.hp1 HG01168.hp1 HG01243.hp1 HG01257.hp2 HG01261.hp1 HG01515.hp2 HG01884.hp1 HG01975.hp1 HG02129.hp2 HG02280.hp1 HG02293.hp2 HG02683.hp2 HG02735.hp1 HG02735.hp2 HG04184.hp1 HG06807.hp2 NA18951.hp2 NA19012.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0019 a0001c0001 a0002c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0002c0019t0001	a0001c0001t0001g0046 a0001c0001t0001g0063 a0001c0001t0001g0070 others(20): Show a0001c0001t0001g0046 a0001c0001t0001g0063 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0095 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0130 a0001c0001t0001g0140 a0001c0001t0001g0148 a0001c0001t0001g0151 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0221 a0001c0001t0002g0108 a0001c0001t0002g0192 a0001c0001t0005g0127 a0001c0001t0006g0231 a0001c0001t0006g0234 a0002c0019t0001g0066	23	236	0.0975	-14	c.126 others(35): Show c.1263+11059_1263+11072delATACACACACGTGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar

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