Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
EXOC6B_chr2_72170984_72831033	72823472	AAAAAAAC others(7): Show AAAAAAACAAAAAAC	A A	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0027 a0001c0001t0002g0027	1	104	0.0096	-14	c.113 others(31): Show c.113+2312_113+2325delGTTTTTTGTTTTTT	EXOC6B	ENSG00000144036.16	transcript	ENST00000272427.11	protein_coding	1/21			chr2	TogoVar
EXOC6_chr10_92843520_93064490	92859820	CATGTGTG others(7): Show CATGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02300.hp2 HG03209.hp1 others(2): Show HG02258.hp1 HG02300.hp2 HG03209.hp1 HG03453.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0287 a0001c0001t0004g0156 a0001c0001t0004g0158 others(2): Show a0001c0001t0002g0287 a0001c0001t0004g0156 a0001c0001t0004g0158 a0001c0001t0004g0159 a0001c0001t0004g0160	5	288	0.0174	-14	c.101 others(33): Show c.101+11187_101+11200delATGTGTGTGTGTGT	EXOC6	ENSG00000138190.17	transcript	ENST00000260762.10	protein_coding	1/21			chr10	TogoVar
EXOC6_chr10_92843520_93064490	92896179	ATATTTTT others(7): Show ATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01981.hp1 HG02004.hp2 others(10): Show HG01943.hp1 HG01981.hp1 HG02004.hp2 HG02148.hp2 NA18939.hp2 NA18946.hp2 NA18956.hp2 NA18966.hp2 NA18970.hp2 NA18973.hp2 NA19010.hp1 NA19060.hp2 NA19085.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0009 a0003c0003 a0001c0001 a0001c0009 a0003c0003	a0001c0001t0001 a0001c0009t0001 a0003c0003t0003 a0001c0001t0001 a0001c0009t0001 a0003c0003t0003	a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0001g0068 others(10): Show a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0009t0001g0001 a0003c0003t0003g0054 a0003c0003t0003g0060 a0003c0003t0003g0061 a0003c0003t0003g0063	13	288	0.0451	-14	c.412 others(31): Show c.412+1161_412+1174delATTTTTTTTTTTTT	EXOC6	ENSG00000138190.17	transcript	ENST00000260762.10	protein_coding	4/21		INFO_REALIGN_3_PRIME	chr10	TogoVar
EXOC6_chr10_92843520_93064490	92896181	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01123.hp2 HG01943.hp2 others(17): Show HG00735.hp1 HG01123.hp2 HG01943.hp2 HG02155.hp1 HG02630.hp2 HG02647.hp2 HG02886.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03471.hp2 HG03831.hp1 HG04199.hp1 NA18957.hp1 NA18983.hp1 NA18994.hp1 NA19056.hp1 NA19070.hp1 NA19074.hp2 NA20752.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0003c0003t0003	a0001c0001t0001g0012 a0001c0001t0001g0052 a0001c0001t0001g0059 others(17): Show a0001c0001t0001g0012 a0001c0001t0001g0052 a0001c0001t0001g0059 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0140 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0002g0106 a0001c0001t0002g0122 a0001c0001t0002g0124 a0001c0001t0002g0144 a0001c0001t0004g0009 a0001c0001t0004g0101 a0003c0003t0003g0053	20	288	0.0694	-14	c.412 others(31): Show c.412+1184_412+1197delTTTTTTTTTTTTTT	EXOC6	ENSG00000138190.17	transcript	ENST00000260762.10	protein_coding	4/21		INFO_REALIGN_3_PRIME	chr10	TogoVar
EXOC6_chr10_92843520_93064490	92911901	TTCTCTCT others(7): Show TTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0287 a0001c0001t0002g0287	1	288	0.0035	-14	c.663 others(31): Show c.663+2288_663+2301delCTCTCTCTCTCTCT	EXOC6	ENSG00000138190.17	transcript	ENST00000260762.10	protein_coding	6/21		INFO_REALIGN_3_PRIME	chr10	TogoVar
EXOC6_chr10_92843520_93064490	93060062	ACAAGAGT others(7): Show ACAAGAGTCGTCGGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00423.hp2 others(106): Show HG00140.hp1 HG00323.hp1 HG00423.hp2 HG00642.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01167.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01433.hp2 HG01515.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02155.hp2 HG02258.hp2 HG02300.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03579.hp2 HG03669.hp2 HG03704.hp1 HG03710.hp1 HG03831.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18939.hp1 NA18941.hp2 NA18943.hp2 NA18947.hp1 NA18950.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp2 NA18961.hp2 NA18963.hp1 NA18964.hp1 NA18966.hp1 NA18970.hp1 NA18977.hp2 NA18979.hp2 NA18981.hp1 NA18982.hp1 NA18989.hp2 NA18991.hp1 NA18994.hp2 NA19004.hp2 NA19005.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19060.hp1 NA19064.hp2 NA19066.hp2 NA19070.hp2 NA19074.hp1 NA19078.hp1 NA19082.hp2 NA19084.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp1	a0001 a0004 a0006 others(1): Show a0001 a0004 a0006 a0007	a0001c0001 a0001c0004 a0004c0005 others(2): Show a0001c0001 a0001c0004 a0004c0005 a0006c0008 a0007c0007	a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 others(6): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0004t0002 a0004c0005t0002 a0006c0008t0002 a0007c0007t0002	a0001c0001t0002g0002 a0001c0001t0002g0014 a0001c0001t0002g0075 others(106): Show a0001c0001t0002g0002 a0001c0001t0002g0014 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0093 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0144 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0176 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0282 a0001c0001t0002g0285 a0001c0001t0002g0286 a0001c0001t0002g0287 a0001c0001t0005g0273 a0001c0001t0005g0274 a0001c0001t0005g0275 a0001c0001t0005g0276 a0001c0001t0005g0277 a0001c0001t0007g0079 a0001c0001t0007g0080 a0001c0001t0007g0143 a0001c0001t0007g0284 a0001c0001t0008g0051 a0001c0001t0008g0283 a0001c0001t0009g0248 a0001c0001t0009g0249 a0001c0004t0002g0145 a0001c0004t0002g0177 a0001c0004t0002g0186 a0001c0004t0002g0227 a0004c0005t0002g0161 a0004c0005t0002g0166 a0004c0005t0002g0167 a0004c0005t0002g0168 a0006c0008t0002g0091 a0007c0007t0002g0078	109	288	0.3785	-14	c.17 others(25): Show c.1708_*1721delCAAGAGTCGTCGGG	EXOC6	ENSG00000138190.17	transcript	ENST00000260762.10	protein_coding		573		chr10	TogoVar
EXOC7_chr17_76076016_76108787	76097703	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02572.hp2 HG02970.hp1 HG00639.hp1 HG02572.hp2 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0013 a0001c0002t0008 a0001c0001t0013 a0001c0002t0008	a0001c0001t0013g0078 a0001c0002t0008g0272 a0001c0002t0008g0273 a0001c0001t0013g0078 a0001c0002t0008g0272 a0001c0002t0008g0273	3	366	0.0082	-14	c.640 others(27): Show c.640+79_640+92delTTTTTTTTTTTTTT	EXOC7	ENSG00000182473.22	transcript	ENST00000589210.6	protein_coding	5/18			chr17	TogoVar
EXOC7_chr17_76076016_76108787	76102417	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02055.hp1 HG02451.hp2 others(5): Show HG00639.hp1 HG02055.hp1 HG02451.hp2 HG02615.hp2 HG02818.hp1 HG02970.hp1 HG03225.hp2 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0008 a0001c0002t0010 others(1): Show a0001c0002t0006 a0001c0002t0008 a0001c0002t0010 a0001c0002t0025	a0001c0002t0006g0269 a0001c0002t0008g0271 a0001c0002t0008g0272 others(5): Show a0001c0002t0006g0269 a0001c0002t0008g0271 a0001c0002t0008g0272 a0001c0002t0008g0273 a0001c0002t0010g0266 a0001c0002t0010g0267 a0001c0002t0010g0270 a0001c0002t0025g0268	8	366	0.0219	-14	c.127 others(29): Show c.127-568_127-555delGTGTGTGTGTGTGT	EXOC7	ENSG00000182473.22	transcript	ENST00000589210.6	protein_coding	2/18			chr17	TogoVar
EXOG_chr3_38491340_38531303	38492731	TACACACA others(7): Show TACACACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01934.hp1 HG02717.hp1 HG01934.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0114 a0001c0001t0001g0188 a0001c0001t0001g0114 a0001c0001t0001g0188	2	412	0.0049	-14	c.-36 others(25): Show c.-3636_-3623delACACACACACACAC	EXOG	ENSG00000157036.13	transcript	ENST00000287675.10	protein_coding		3608		chr3	TogoVar
EXOG_chr3_38491340_38531303	38492791	CACACACA others(7): Show CACACACACACACAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp2 HG02129.hp2 HG03239.hp2 others(4): Show HG01081.hp2 HG02129.hp2 HG03239.hp2 NA18952.hp1 NA18968.hp2 NA19062.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0018 others(3): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0157 a0001c0001t0001g0167 a0001c0001t0004g0002	7	412	0.0170	-14	c.-35 others(25): Show c.-3576_-3563delACACACACACACAT	EXOG	ENSG00000157036.13	transcript	ENST00000287675.10	protein_coding		3548		chr3	TogoVar
EXOG_chr3_38491340_38531303	38527651	CCGCTTCA others(7): Show CCGCTTCAGCCCTCA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03491.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0171	1	412	0.0024	-14	c.32 others(25): Show c.3290_*3303delCGCTTCAGCCCTCA	EXOG	ENSG00000157036.13	transcript	ENST00000287675.10	protein_coding		1349		chr3	TogoVar
EXOSC10_chr1_11061618_11104869	11080559	AAAAAACA others(7): Show AAAAAACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG02004.hp1 HG01175.hp1 HG02004.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0258 a0001c0003t0002g0259 a0001c0003t0002g0258 a0001c0003t0002g0259	2	284	0.0070	-14	c.158 others(29): Show c.1587-24_1587-11delGTGTGTGTGTTTTT	EXOSC10	ENSG00000171824.14	transcript	ENST00000376936.9	protein_coding	12/24			chr1	TogoVar
EXOSC10_chr1_11061618_11104869	11080561	AAAACACA others(7): Show AAAACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00609.hp2 HG00673.hp1 others(32): Show HG00280.hp2 HG00609.hp2 HG00673.hp1 HG01109.hp2 HG02135.hp1 HG02630.hp1 HG02683.hp1 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG03041.hp1 HG03098.hp1 HG03688.hp1 HG03704.hp2 NA18522.hp2 NA18906.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18943.hp1 NA18950.hp1 NA18954.hp2 NA18972.hp1 NA18978.hp2 NA18988.hp1 NA18991.hp1 NA18993.hp1 NA19007.hp1 NA19054.hp2 NA19055.hp2 NA19070.hp2 NA19085.hp1 NA19240.hp2 NA21309.hp2	a0001 a0005 a0001 a0005	a0001c0003 a0001c0022 a0001c0023 others(1): Show a0001c0003 a0001c0022 a0001c0023 a0005c0024	a0001c0003t0001 a0001c0003t0002 a0001c0022t0001 others(2): Show a0001c0003t0001 a0001c0003t0002 a0001c0022t0001 a0001c0023t0002 a0005c0024t0002	a0001c0003t0001g0224 a0001c0003t0001g0226 a0001c0003t0001g0227 others(31): Show a0001c0003t0001g0224 a0001c0003t0001g0226 a0001c0003t0001g0227 a0001c0003t0001g0228 a0001c0003t0001g0229 a0001c0003t0001g0230 a0001c0003t0001g0231 a0001c0003t0001g0234 a0001c0003t0001g0235 a0001c0003t0001g0236 a0001c0003t0001g0243 a0001c0003t0001g0244 a0001c0003t0001g0245 a0001c0003t0001g0246 a0001c0003t0001g0247 a0001c0003t0001g0248 a0001c0003t0001g0249 a0001c0003t0001g0260 a0001c0003t0001g0261 a0001c0003t0001g0264 a0001c0003t0001g0265 a0001c0003t0001g0266 a0001c0003t0002g0010 a0001c0003t0002g0221 a0001c0003t0002g0222 a0001c0003t0002g0250 a0001c0003t0002g0251 a0001c0003t0002g0252 a0001c0003t0002g0253 a0001c0003t0002g0256 a0001c0003t0002g0257 a0001c0022t0001g0268 a0001c0023t0002g0262 a0005c0024t0002g0263	35	284	0.1232	-14	c.158 others(29): Show c.1587-26_1587-13delGTGTGTGTGTGTTT	EXOSC10	ENSG00000171824.14	transcript	ENST00000376936.9	protein_coding	12/24			chr1	TogoVar
EXOSC10_chr1_11061618_11104869	11080592	ACACACAC others(7): Show ACACACACACACACG	A A	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0254 a0001c0003t0002g0254	1	284	0.0035	-14	c.158 others(29): Show c.1587-57_1587-44delCGTGTGTGTGTGTG	EXOSC10	ENSG00000171824.14	transcript	ENST00000376936.9	protein_coding	12/24			chr1	TogoVar
EXOSC1_chr10_97430909_97451006	97445388	GGTGGAGA others(7): Show GGTGGAGATAGTGGC	G G	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	430	0.0023	-14	c.147 others(29): Show c.147+330_147+343delGCCACTATCTCCAC	EXOSC1	ENSG00000171311.13	transcript	ENST00000370902.8	protein_coding	2/7			chr10	TogoVar
EXOSC7_chr3_44971244_45016471	44994856	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA20905.hp1 NA19030.hp1 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0244 a0003c0003t0001g0045 a0001c0001t0001g0244 a0003c0003t0001g0045	2	340	0.0059	-14	c.255 others(31): Show c.255-2194_255-2181delGTGTGTGTGTGTGT	EXOSC7	ENSG00000075914.13	transcript	ENST00000265564.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
EXPH5_chr11_108500435_108598768	108532358	ATATATAT others(7): Show ATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01256.hp2 HG01258.hp2 others(1): Show HG00738.hp2 HG01256.hp2 HG01258.hp2 NA20805.hp1	a0012 a0014 a0012 a0014	a0012c0012 a0014c0017 a0012c0012 a0014c0017	a0012c0012t0023 a0012c0012t0046 a0014c0017t0016 a0012c0012t0023 a0012c0012t0046 a0014c0017t0016	a0012c0012t0023g0197 a0012c0012t0023g0198 a0012c0012t0046g0196 others(1): Show a0012c0012t0023g0197 a0012c0012t0023g0198 a0012c0012t0046g0196 a0014c0017t0016g0310	4	314	0.0127	-14	c.444 others(31): Show c.444-4188_444-4175delAAAAAATATATATA	EXPH5	ENSG00000110723.12	transcript	ENST00000265843.9	protein_coding	3/5			chr11	TogoVar
EXPH5_chr11_108500435_108598768	108573184	GAAAGAAA others(7): Show GAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0007 a0007	a0007c0007 a0007c0007	a0007c0007t0004 a0007c0007t0004	a0007c0007t0004g0029 a0007c0007t0004g0029	1	314	0.0032	-14	c.119 others(33): Show c.119+20220_119+20233delTTCTTTCTTTCTTT	EXPH5	ENSG00000110723.12	transcript	ENST00000265843.9	protein_coding	1/5			chr11	TogoVar
EXT1_chr8_117789490_118116826	117827784	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02572.hp1 HG02970.hp2 others(2): Show HG02109.hp2 HG02572.hp1 HG02970.hp2 NA20129.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0015 a0001c0001t0033 a0001c0001t0035 others(2): Show a0001c0001t0015 a0001c0001t0033 a0001c0001t0035 a0001c0001t0039 a0001c0002t0048	a0001c0001t0015g0089 a0001c0001t0033g0015 a0001c0001t0035g0017 others(2): Show a0001c0001t0015g0089 a0001c0001t0033g0015 a0001c0001t0035g0017 a0001c0001t0039g0091 a0001c0002t0048g0031	5	190	0.0263	-14	c.128 others(33): Show c.1284+2432_1284+2445delTTTTTTTTTTTTTT	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding	4/10			chr8	TogoVar
EXT1_chr8_117789490_118116826	117829569	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01243.hp2 HG01943.hp2 others(27): Show HG01081.hp2 HG01243.hp2 HG01943.hp2 HG01952.hp1 HG02055.hp1 HG02132.hp1 HG02145.hp2 HG02280.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp2 HG03491.hp2 HG03492.hp1 HG03710.hp1 HG03831.hp1 NA18952.hp2 NA18957.hp2 NA18968.hp2 NA18969.hp2 NA18978.hp2 NA18981.hp2 NA19000.hp1 NA19066.hp2 NA19090.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0007 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0014 a0001c0001t0019 a0001c0001t0032 a0001c0001t0044 a0001c0001t0055 a0001c0001t0071 a0001c0002t0002 a0001c0002t0004 a0001c0004t0013 a0001c0004t0015 a0001c0004t0060 a0001c0007t0030 a0001c0008t0006	a0001c0001t0001g0028 a0001c0001t0002g0053 a0001c0001t0002g0105 others(26): Show a0001c0001t0001g0028 a0001c0001t0002g0053 a0001c0001t0002g0105 a0001c0001t0002g0107 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0040 a0001c0001t0003g0042 a0001c0001t0003g0057 a0001c0001t0003g0114 a0001c0001t0003g0118 a0001c0001t0003g0119 a0001c0001t0003g0120 a0001c0001t0009g0088 a0001c0001t0014g0007 a0001c0001t0014g0009 a0001c0001t0019g0034 a0001c0001t0032g0011 a0001c0001t0044g0038 a0001c0001t0055g0087 a0001c0001t0071g0181 a0001c0002t0002g0046 a0001c0002t0004g0001 a0001c0004t0013g0004 a0001c0004t0013g0005 a0001c0004t0015g0158 a0001c0004t0060g0165 a0001c0007t0030g0013 a0001c0008t0006g0162	30	190	0.1579	-14	c.128 others(31): Show c.1284+647_1284+660delAAAAAAAAAAAAAA	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding	4/10			chr8	TogoVar
EXT1_chr8_117789490_118116826	117887809	GGCACGGT others(7): Show GGCACGGTGACTCAC	G G	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0045	1	190	0.0053	-14	c.963 others(33): Show c.963-50622_963-50609delGTGAGTCACCGTGC	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding	1/10			chr8	TogoVar
EXT1_chr8_117789490_118116826	118027313	TCACACAC others(7): Show TCACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02258.hp2 NA18983.hp1 HG02109.hp2 HG02258.hp2 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0047 a0001c0002t0002 a0001c0002t0048 a0001c0001t0047 a0001c0002t0002 a0001c0002t0048	a0001c0001t0047g0127 a0001c0002t0002g0103 a0001c0002t0048g0031 a0001c0001t0047g0127 a0001c0002t0002g0103 a0001c0002t0048g0031	3	190	0.0158	-14	c.962 others(33): Show c.962+82758_962+82771delTGTGTGTGTGTGTG	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding	1/10			chr8	TogoVar
EXT1_chr8_117789490_118116826	118070226	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00738.hp2 HG01081.hp1 others(9): Show HG00140.hp2 HG00738.hp2 HG01081.hp1 HG02257.hp2 HG02630.hp1 HG03041.hp1 HG03490.hp1 HG03492.hp2 HG03710.hp1 HG03927.hp2 NA18906.hp2 NA19030.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0003c0012	a0001c0001t0001 a0001c0001t0005 a0001c0001t0014 others(6): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0014 a0001c0001t0021 a0001c0001t0031 a0001c0001t0068 a0001c0003t0017 a0001c0005t0029 a0003c0012t0001	a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0005g0026 others(9): Show a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0005g0026 a0001c0001t0005g0027 a0001c0001t0014g0009 a0001c0001t0021g0023 a0001c0001t0021g0025 a0001c0001t0031g0006 a0001c0001t0068g0189 a0001c0003t0017g0186 a0001c0005t0029g0008 a0003c0012t0001g0161	12	190	0.0632	-14	c.962 others(33): Show c.962+39845_962+39858delCACACACACACACA	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding	1/10			chr8	TogoVar
EXT1_chr8_117789490_118116826	118113683	CTCTCTCT others(7): Show CTCTCTCTCTCTCTA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0070 a0001c0001t0005g0070	1	190	0.0053	-14	c.-26 others(25): Show c.-2651_-2638delTAGAGAGAGAGAGA	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding		1858		chr8	TogoVar
EXT1_chr8_117789490_118116826	118113687	CTCTCTCT others(7): Show CTCTCTCTCTATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp1 HG02572.hp2 HG02630.hp2 HG02129.hp1 HG02572.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0063 a0001c0002t0028 a0001c0002t0036 a0001c0001t0063 a0001c0002t0028 a0001c0002t0036	a0001c0001t0063g0170 a0001c0002t0028g0010 a0001c0002t0036g0018 a0001c0001t0063g0170 a0001c0002t0028g0010 a0001c0002t0036g0018	3	190	0.0158	-14	c.-26 others(25): Show c.-2655_-2642delTATATAGAGAGAGA	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding		1862		chr8	TogoVar
EXT1_chr8_117789490_118116826	118113689	CTCTCTCT others(7): Show CTCTCTCTATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0007 a0001c0001t0014g0007	1	190	0.0053	-14	c.-26 others(25): Show c.-2657_-2644delTATATATAGAGAGA	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding		1864		chr8	TogoVar
EXT1_chr8_117789490_118116826	118113693	CTCTATAT others(7): Show CTCTATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0013 a0001c0004t0013	a0001c0004t0013g0004 a0001c0004t0013g0004	1	190	0.0053	-14	c.-26 others(25): Show c.-2661_-2648delTATATATATATAGA	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding		1868		chr8	TogoVar
EXT1_chr8_117789490_118116826	118113695	CTATATAT others(7): Show CTATATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0013 a0001c0004t0013	a0001c0004t0013g0005 a0001c0004t0013g0005	1	190	0.0053	-14	c.-26 others(25): Show c.-2663_-2650delTATATATATATATA	EXT1	ENSG00000182197.13	transcript	ENST00000378204.7	protein_coding		1870		chr8	TogoVar
EXT2_chr11_44090678_44256962	44119124	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02622.hp1 HG02630.hp1 others(4): Show HG00323.hp2 HG02622.hp1 HG02630.hp1 HG02818.hp1 HG03453.hp1 HG06807.hp2 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0004 a0004c0010 a0001c0001 a0001c0004 a0004c0010	a0001c0001t0007 a0001c0001t0010 a0001c0001t0014 others(2): Show a0001c0001t0007 a0001c0001t0010 a0001c0001t0014 a0001c0004t0060 a0004c0010t0010	a0001c0001t0007g0256 a0001c0001t0010g0308 a0001c0001t0014g0001 others(3): Show a0001c0001t0007g0256 a0001c0001t0010g0308 a0001c0001t0014g0001 a0001c0001t0014g0180 a0001c0004t0060g0289 a0004c0010t0010g0309	7	334	0.0210	-14	c.743 others(31): Show c.743+4856_743+4869delTATATATATATATA	EXT2	ENSG00000151348.16	transcript	ENST00000533608.7	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr11	TogoVar
EYA1_chr8_71192433_71367069	71272874	TTATTTTC others(7): Show TTATTTTCCCTACGA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00597.hp2 others(43): Show HG00408.hp1 HG00423.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG01433.hp1 HG01496.hp1 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01993.hp1 HG02074.hp1 HG02165.hp1 HG02723.hp2 HG03098.hp1 HG03239.hp1 HG03927.hp2 HG04184.hp1 NA18946.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18970.hp2 NA18972.hp2 NA18977.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18993.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19011.hp2 NA19054.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19077.hp1 NA19078.hp2 NA19083.hp2	a0001 a0003 a0001 a0003	a0001c0003 a0001c0004 a0001c0005 others(2): Show a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0003c0012	a0001c0003t0002 a0001c0004t0001 a0001c0004t0004 others(6): Show a0001c0003t0002 a0001c0004t0001 a0001c0004t0004 a0001c0005t0001 a0001c0005t0005 a0001c0007t0001 a0001c0007t0002 a0001c0007t0028 a0003c0012t0001	a0001c0003t0002g0185 a0001c0004t0001g0073 a0001c0004t0001g0074 others(43): Show a0001c0003t0002g0185 a0001c0004t0001g0073 a0001c0004t0001g0074 a0001c0004t0001g0083 a0001c0004t0001g0085 a0001c0004t0001g0100 a0001c0004t0001g0108 a0001c0004t0001g0111 a0001c0004t0001g0123 a0001c0004t0001g0125 a0001c0004t0001g0130 a0001c0004t0001g0134 a0001c0004t0001g0146 a0001c0004t0001g0166 a0001c0004t0001g0175 a0001c0004t0001g0188 a0001c0004t0004g0071 a0001c0004t0004g0072 a0001c0004t0004g0117 a0001c0004t0004g0121 a0001c0004t0004g0122 a0001c0004t0004g0156 a0001c0004t0004g0167 a0001c0005t0001g0054 a0001c0005t0001g0077 a0001c0005t0001g0079 a0001c0005t0001g0102 a0001c0005t0001g0107 a0001c0005t0001g0126 a0001c0005t0001g0132 a0001c0005t0001g0135 a0001c0005t0001g0173 a0001c0005t0001g0182 a0001c0005t0001g0184 a0001c0005t0001g0204 a0001c0005t0005g0151 a0001c0005t0005g0197 a0001c0007t0001g0080 a0001c0007t0001g0147 a0001c0007t0002g0068 a0001c0007t0002g0069 a0001c0007t0002g0070 a0001c0007t0002g0109 a0001c0007t0002g0129 a0001c0007t0028g0232 a0003c0012t0001g0112	46	232	0.1983	-14	c.827 others(29): Show c.827-991_827-978delTCGTAGGGAAAATA	EYA1	ENSG00000104313.20	transcript	ENST00000340726.8	protein_coding	9/17			chr8	TogoVar
EYA1_chr8_71192433_71367069	71331245	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00423.hp2 others(74): Show HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00735.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp1 HG01167.hp1 HG01256.hp1 HG01496.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01993.hp1 HG01993.hp2 HG02074.hp2 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02451.hp2 HG02735.hp2 HG03098.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03490.hp1 HG03492.hp2 HG03669.hp1 HG03669.hp2 HG03834.hp1 HG03927.hp2 NA18943.hp1 NA18946.hp1 NA18946.hp2 NA18952.hp2 NA18955.hp1 NA18955.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp2 NA18977.hp1 NA18977.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18993.hp1 NA18993.hp2 NA19002.hp2 NA19009.hp1 NA19011.hp1 NA19054.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19068.hp2 NA19072.hp1 NA19074.hp2 NA19077.hp1 NA19078.hp1 NA19078.hp2 NA19083.hp2 NA20129.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0010 a0003c0012	a0001c0001t0001 a0001c0001t0005 a0001c0001t0015 others(15): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0015 a0001c0002t0001 a0001c0002t0004 a0001c0003t0002 a0001c0003t0008 a0001c0003t0021 a0001c0003t0027 a0001c0004t0001 a0001c0004t0004 a0001c0005t0001 a0001c0005t0005 a0001c0007t0001 a0001c0007t0002 a0001c0007t0028 a0001c0010t0002 a0003c0012t0001	a0001c0001t0001g0011 a0001c0001t0001g0060 a0001c0001t0001g0090 others(74): Show a0001c0001t0001g0011 a0001c0001t0001g0060 a0001c0001t0001g0090 a0001c0001t0001g0106 a0001c0001t0001g0145 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0005g0099 a0001c0001t0005g0124 a0001c0001t0015g0002 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0063 a0001c0002t0001g0078 a0001c0002t0001g0086 a0001c0002t0001g0089 a0001c0002t0001g0093 a0001c0002t0001g0110 a0001c0002t0001g0118 a0001c0002t0001g0148 a0001c0002t0001g0150 a0001c0002t0001g0159 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0164 a0001c0002t0001g0165 a0001c0002t0001g0225 a0001c0002t0004g0062 a0001c0002t0004g0088 a0001c0003t0002g0084 a0001c0003t0002g0120 a0001c0003t0002g0136 a0001c0003t0002g0160 a0001c0003t0008g0116 a0001c0003t0021g0101 a0001c0003t0027g0231 a0001c0004t0001g0073 a0001c0004t0001g0074 a0001c0004t0001g0083 a0001c0004t0001g0085 a0001c0004t0001g0100 a0001c0004t0001g0108 a0001c0004t0001g0111 a0001c0004t0001g0123 a0001c0004t0001g0125 a0001c0004t0001g0130 a0001c0004t0001g0134 a0001c0004t0001g0146 a0001c0004t0001g0175 a0001c0004t0004g0071 a0001c0004t0004g0072 a0001c0004t0004g0117 a0001c0004t0004g0121 a0001c0004t0004g0122 a0001c0004t0004g0156 a0001c0004t0004g0167 a0001c0005t0001g0079 a0001c0005t0001g0102 a0001c0005t0001g0126 a0001c0005t0001g0132 a0001c0005t0001g0135 a0001c0005t0001g0184 a0001c0005t0001g0204 a0001c0005t0005g0151 a0001c0007t0001g0080 a0001c0007t0002g0068 a0001c0007t0002g0069 a0001c0007t0002g0070 a0001c0007t0002g0109 a0001c0007t0002g0129 a0001c0007t0028g0232 a0001c0010t0002g0038 a0003c0012t0001g0112	77	232	0.3319	-14	c.202 others(31): Show c.202+2838_202+2851delGTGTGTGTGTGTGT	EYA1	ENSG00000104313.20	transcript	ENST00000340726.8	protein_coding	4/17			chr8	TogoVar
EYA1_chr8_71192433_71367069	71364939	CATATATA others(7): Show CATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00438.hp1 HG00621.hp1 others(36): Show HG00323.hp2 HG00438.hp1 HG00621.hp1 HG00639.hp2 HG00735.hp1 HG01952.hp2 HG02074.hp2 HG02155.hp1 HG02165.hp1 HG02559.hp1 HG02615.hp1 HG02717.hp2 HG02735.hp2 HG02922.hp1 HG03098.hp1 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03669.hp1 HG03704.hp2 HG03710.hp2 HG03927.hp2 HG04115.hp2 NA18946.hp1 NA18955.hp1 NA18970.hp2 NA18972.hp2 NA18977.hp2 NA18982.hp1 NA18986.hp2 NA19000.hp1 NA19009.hp1 NA19056.hp2 NA19063.hp1 NA19068.hp1 NA19078.hp1 NA19083.hp2 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0002c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0002t0001 a0001c0002t0002 a0001c0003t0002 a0001c0003t0008 a0001c0004t0001 a0001c0004t0004 a0001c0005t0001 a0001c0005t0005 a0001c0007t0002 a0002c0008t0002	a0001c0001t0001g0011 a0001c0001t0001g0114 a0001c0001t0001g0128 others(36): Show a0001c0001t0001g0011 a0001c0001t0001g0114 a0001c0001t0001g0128 a0001c0001t0001g0155 a0001c0001t0001g0174 a0001c0001t0001g0214 a0001c0001t0003g0131 a0001c0001t0003g0215 a0001c0001t0005g0099 a0001c0001t0005g0124 a0001c0001t0011g0213 a0001c0002t0001g0091 a0001c0002t0001g0092 a0001c0002t0001g0093 a0001c0002t0001g0098 a0001c0002t0001g0110 a0001c0002t0001g0113 a0001c0002t0001g0119 a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0001g0162 a0001c0002t0001g0194 a0001c0002t0002g0218 a0001c0003t0002g0157 a0001c0003t0002g0160 a0001c0003t0008g0216 a0001c0004t0001g0100 a0001c0004t0001g0108 a0001c0004t0001g0130 a0001c0004t0001g0166 a0001c0004t0001g0175 a0001c0004t0004g0167 a0001c0005t0001g0102 a0001c0005t0001g0126 a0001c0005t0001g0132 a0001c0005t0005g0151 a0001c0007t0002g0109 a0001c0007t0002g0129 a0002c0008t0002g0028	39	232	0.1681	-14	c.-33 others(25): Show c.-3361_-3348delATATATATATATAT	EYA1	ENSG00000104313.20	transcript	ENST00000340726.8	protein_coding		2871		chr8	TogoVar
EYA2_chr20_46889843_47193844	46908870	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01070.hp1 HG01071.hp1 others(10): Show HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01106.hp2 HG02809.hp2 HG02976.hp2 HG03041.hp2 HG03139.hp2 HG03225.hp2 HG03471.hp2 HG03486.hp2 HG03516.hp1 NA18522.hp2	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0001c0002 a0001c0012 others(4): Show a0001c0001 a0001c0002 a0001c0012 a0001c0013 a0003c0007 a0004c0008 a0005c0006	a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 others(6): Show a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0004 a0001c0012t0001 a0001c0013t0001 a0003c0007t0001 a0004c0008t0001 a0005c0006t0002	a0001c0001t0002g0042 a0001c0001t0003g0041 a0001c0001t0003g0053 others(10): Show a0001c0001t0002g0042 a0001c0001t0003g0041 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0029 a0001c0002t0004g0028 a0001c0012t0001g0024 a0001c0013t0001g0025 a0003c0007t0001g0023 a0004c0008t0001g0147 a0005c0006t0002g0167	13	238	0.0546	-14	c.-11 others(33): Show c.-11+13907_-11+13920delTTTTTTTTTTTTTT	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	46987954	CTCTCTCT others(7): Show CTCTCTCTCTCTATA	C C	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0233 a0001c0003t0002g0233	1	238	0.0042	-14	c.-10 others(31): Show c.-10-2045_-10-2032delCTCTCTCTCTATAT	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	47084537	AAAAAATA others(7): Show AAAAAATAAAGAAAT	A A	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0085 a0001c0003t0003g0085	1	238	0.0042	-14	c.662 others(31): Show c.662-4687_662-4674delAAAAATAAAGAAAT	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	7/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	47112862	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02976.hp2 HG03139.hp1 others(8): Show HG02257.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03471.hp1 HG03516.hp2 HG03710.hp2 HG06807.hp2 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0004 a0001c0001t0001 a0001c0002t0001 a0001c0002t0004	a0001c0001t0001g0220 a0001c0001t0001g0237 a0001c0002t0001g0026 others(8): Show a0001c0001t0001g0220 a0001c0001t0001g0237 a0001c0002t0001g0026 a0001c0002t0001g0040 a0001c0002t0001g0065 a0001c0002t0001g0236 a0001c0002t0004g0002 a0001c0002t0004g0028 a0001c0002t0004g0156 a0001c0002t0004g0169 a0001c0002t0004g0219	11	238	0.0462	-14	c.888 others(33): Show c.888+15708_888+15721delTTTTTTTTTTTTTT	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	47135840	AACAAACA others(7): Show AACAAACAAACAAAC	A A	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0143 a0001c0002t0001g0143	1	238	0.0042	-14	c.889 others(31): Show c.889-7217_889-7204delCAAACAAACAAACA	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	47156089	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0143 a0001c0002t0001g0143	1	238	0.0042	-14	c.978 others(33): Show c.978+12967_978+12980delCACACACACACACA	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	47156123	CACACATA others(7): Show CACACATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0006 a0001c0004t0001g0006	1	238	0.0042	-14	c.978 others(33): Show c.978+12977_978+12990delCACATATATATATA	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	47156127	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0009 a0001c0002t0001g0009	1	238	0.0042	-14	c.979 others(33): Show c.979-12967_979-12954delATATATATATATAT	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA2_chr20_46889843_47193844	47185276	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0110 a0001c0003t0002g0110	1	238	0.0042	-14	c.153 others(33): Show c.1536+1914_1536+1927delTTTTTTTTTTTTTT	EYA2	ENSG00000064655.19	transcript	ENST00000327619.10	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
EYA3_chr1_27965344_28093610	27971596	CAACAACA others(7): Show CAACAACAACAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0390 a0001c0001t0033g0390	1	392	0.0026	-14	c.28 others(25): Show c.2856_*2869delTTTTTGTTGTTGTT	EYA3	ENSG00000158161.16	transcript	ENST00000373871.8	protein_coding	18/18	2856		chr1	TogoVar
EYA3_chr1_27965344_28093610	28007698	TAGCATCA others(7): Show TAGCATCAAAAAGAA	T T	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03130.hp2 NA18522.hp1 HG02965.hp2 HG03130.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0298 a0001c0001t0015g0299 a0001c0001t0015g0300 a0001c0001t0015g0298 a0001c0001t0015g0299 a0001c0001t0015g0300	3	392	0.0077	-14	c.909 others(31): Show c.909+3235_909+3248delTTCTTTTTGATGCT	EYA3	ENSG00000158161.16	transcript	ENST00000373871.8	protein_coding	10/17			chr1	TogoVar
EYA3_chr1_27965344_28093610	28020667	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0382 a0001c0001t0004g0382	1	392	0.0026	-14	c.500 others(31): Show c.500-3442_500-3429delACACACACACACAC	EYA3	ENSG00000158161.16	transcript	ENST00000373871.8	protein_coding	7/17			chr1	TogoVar
EYA3_chr1_27965344_28093610	28084583	ATATATAT others(7): Show ATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01516.hp1 HG01517.hp2 others(12): Show HG01256.hp1 HG01516.hp1 HG01517.hp2 HG02083.hp2 HG02148.hp1 HG02273.hp1 HG02293.hp2 HG02735.hp1 HG03834.hp2 NA18747.hp2 NA18964.hp1 NA19009.hp2 NA19065.hp2 NA19066.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0026 a0001c0001t0002 a0001c0001t0026	a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0238 others(12): Show a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0275 a0001c0001t0002g0276 a0001c0001t0002g0304 a0001c0001t0002g0308 a0001c0001t0026g0243	15	392	0.0383	-14	c.-69 others(31): Show c.-69+3927_-69+3940delAATATATATATATA	EYA3	ENSG00000158161.16	transcript	ENST00000373871.8	protein_coding	1/17			chr1	TogoVar
EYA3_chr1_27965344_28093610	28084585	ATATATAT others(7): Show ATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00735.hp2 HG02080.hp2 others(2): Show HG00099.hp1 HG00735.hp2 HG02080.hp2 HG02572.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 a0001c0001t0002 a0001c0001t0008 a0001c0001t0009	a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 others(2): Show a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0008g0006 a0001c0001t0009g0255	5	392	0.0128	-14	c.-69 others(31): Show c.-69+3925_-69+3938delAAAATATATATATA	EYA3	ENSG00000158161.16	transcript	ENST00000373871.8	protein_coding	1/17			chr1	TogoVar
EYA3_chr1_27965344_28093610	28084587	ATATATAT others(7): Show ATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01515.hp2 HG01981.hp1 others(1): Show HG00280.hp2 HG01515.hp2 HG01981.hp1 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0262 a0001c0001t0002g0264 a0001c0001t0002g0265 others(1): Show a0001c0001t0002g0262 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0008g0263	4	392	0.0102	-14	c.-69 others(31): Show c.-69+3923_-69+3936delAAAAAATATATATA	EYA3	ENSG00000158161.16	transcript	ENST00000373871.8	protein_coding	1/17			chr1	TogoVar
EYA4_chr6_133236357_133537128	133252942	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02451.hp2 HG02615.hp1 others(5): Show HG02145.hp1 HG02451.hp2 HG02615.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG03098.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0012 a0001c0001t0013 a0002c0002t0003 others(2): Show a0001c0001t0012 a0001c0001t0013 a0002c0002t0003 a0002c0002t0048 a0002c0002t0049	a0001c0001t0012g0177 a0001c0001t0012g0178 a0001c0001t0013g0115 others(5): Show a0001c0001t0012g0177 a0001c0001t0012g0178 a0001c0001t0013g0115 a0001c0001t0013g0117 a0001c0001t0013g0119 a0002c0002t0003g0138 a0002c0002t0048g0118 a0002c0002t0049g0116	8	264	0.0303	-14	c.-66 others(33): Show c.-66+11228_-66+11241delACACACACACACAC	EYA4	ENSG00000112319.21	transcript	ENST00000355286.12	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
EYA4_chr6_133236357_133537128	133356746	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00558.hp1 HG00558.hp2 others(24): Show HG00423.hp1 HG00558.hp1 HG00558.hp2 HG00673.hp1 HG01106.hp1 HG02056.hp1 HG02083.hp2 HG02155.hp1 HG03041.hp2 HG03490.hp2 HG03491.hp1 HG03942.hp2 HG04199.hp1 NA18522.hp1 NA18941.hp1 NA18946.hp1 NA18952.hp1 NA18962.hp1 NA18963.hp2 NA18964.hp1 NA18970.hp2 NA18982.hp2 NA18999.hp2 NA19005.hp2 NA19006.hp1 NA19057.hp2 NA19078.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0001t0025 a0001c0001t0026 a0002c0002t0001 a0002c0002t0005 a0002c0002t0006 a0002c0002t0024	a0001c0001t0001g0191 a0001c0001t0001g0194 a0001c0001t0001g0206 others(24): Show a0001c0001t0001g0191 a0001c0001t0001g0194 a0001c0001t0001g0206 a0001c0001t0001g0217 a0001c0001t0001g0237 a0001c0001t0001g0253 a0001c0001t0001g0258 a0001c0001t0002g0157 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0193 a0001c0001t0002g0202 a0001c0001t0002g0243 a0001c0001t0013g0117 a0001c0001t0025g0210 a0001c0001t0026g0228 a0002c0002t0001g0015 a0002c0002t0001g0016 a0002c0002t0001g0023 a0002c0002t0001g0136 a0002c0002t0001g0187 a0002c0002t0001g0188 a0002c0002t0001g0209 a0002c0002t0001g0221 a0002c0002t0005g0111 a0002c0002t0006g0081 a0002c0002t0024g0218	27	264	0.1023	-14	c.34- others(31): Show c.34-25613_34-25600delGTGTGTGTGTGTGT	EYA4	ENSG00000112319.21	transcript	ENST00000355286.12	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
EYA4_chr6_133236357_133537128	133394282	GTGTTTTT others(7): Show GTGTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00408.hp2 others(87): Show HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00423.hp2 HG00558.hp1 HG00609.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01168.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01517.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp2 HG02132.hp1 HG02155.hp2 HG02257.hp1 HG02486.hp1 HG02523.hp2 HG02895.hp1 HG02896.hp2 HG03017.hp2 HG03490.hp1 HG03491.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03927.hp2 HG03942.hp1 HG04199.hp2 NA18747.hp1 NA18941.hp2 NA18947.hp1 NA18947.hp2 NA18952.hp2 NA18963.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18985.hp1 NA18985.hp2 NA18992.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19004.hp1 NA19006.hp2 NA19011.hp1 NA19012.hp1 NA19043.hp2 NA19057.hp1 NA19074.hp1 NA19076.hp2 NA19078.hp2 NA19085.hp1 NA19088.hp2 NA20300.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0012 a0001c0001t0018 a0001c0001t0025 a0001c0001t0032 a0001c0001t0037 a0001c0001t0040 a0002c0002t0001 a0002c0002t0004 a0002c0002t0005 a0002c0002t0006 a0002c0002t0010 a0002c0002t0017 a0002c0002t0023 a0002c0002t0024 a0002c0002t0039	a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0032 others(87): Show a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0032 a0001c0001t0001g0057 a0001c0001t0001g0063 a0001c0001t0001g0068 a0001c0001t0001g0075 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0190 a0001c0001t0001g0196 a0001c0001t0001g0211 a0001c0001t0001g0220 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0244 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0262 a0001c0001t0002g0001 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0028 a0001c0001t0002g0039 a0001c0001t0002g0062 a0001c0001t0002g0070 a0001c0001t0002g0073 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0151 a0001c0001t0002g0153 a0001c0001t0002g0156 a0001c0001t0002g0159 a0001c0001t0002g0161 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0225 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0259 a0001c0001t0003g0069 a0001c0001t0003g0110 a0001c0001t0003g0160 a0001c0001t0003g0163 a0001c0001t0003g0169 a0001c0001t0003g0260 a0001c0001t0012g0120 a0001c0001t0012g0177 a0001c0001t0012g0178 a0001c0001t0018g0222 a0001c0001t0018g0240 a0001c0001t0025g0210 a0001c0001t0032g0165 a0001c0001t0037g0236 a0001c0001t0040g0250 a0002c0002t0001g0025 a0002c0002t0001g0042 a0002c0002t0001g0077 a0002c0002t0001g0162 a0002c0002t0001g0164 a0002c0002t0001g0207 a0002c0002t0001g0212 a0002c0002t0001g0223 a0002c0002t0001g0232 a0002c0002t0004g0029 a0002c0002t0004g0104 a0002c0002t0004g0171 a0002c0002t0004g0174 a0002c0002t0005g0079 a0002c0002t0005g0219 a0002c0002t0005g0226 a0002c0002t0005g0227 a0002c0002t0005g0242 a0002c0002t0006g0099 a0002c0002t0010g0141 a0002c0002t0017g0201 a0002c0002t0023g0204 a0002c0002t0023g0205 a0002c0002t0024g0218 a0002c0002t0039g0213	90	264	0.3409	-14	c.83+ others(31): Show c.83+11843_83+11856delGTTTTTTTTTTTTT	EYA4	ENSG00000112319.21	transcript	ENST00000355286.12	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr6	TogoVar

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