Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FGFR1_chr8_38406143_38473635	38452200	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18962.hp1 NA19012.hp2 others(3): Show NA18944.hp1 NA18962.hp1 NA19012.hp2 NA19030.hp2 NA20129.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0027 a0001c0001t0002g0211 a0001c0001t0002g0263 others(3): Show a0001c0001t0001g0027 a0001c0001t0002g0211 a0001c0001t0002g0263 a0001c0001t0003g0064 a0001c0001t0003g0153 a0001c0001t0003g0154	6	336	0.0179	-14	c.91+ others(29): Show c.91+5142_91+5155delGTGTGTGTGTGTGT	FGFR1	ENSG00000077782.23	transcript	ENST00000447712.7	protein_coding	2/17			chr8	TogoVar
FGFR2_chr10_121473332_121603444	121490154	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0226 a0001c0001t0004g0226	1	240	0.0042	-14	c.186 others(33): Show c.1864-2055_1864-2042delAAAAAAAAAAAAAA	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	13/17			chr10	TogoVar
FGFR2_chr10_121473332_121603444	121524099	TATACACA others(7): Show TATACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00642.hp1 others(22): Show HG00099.hp2 HG00408.hp1 HG00642.hp1 HG00735.hp1 HG01109.hp2 HG01257.hp1 HG01261.hp2 HG01891.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02165.hp2 HG02523.hp2 HG02622.hp1 HG02647.hp2 HG02809.hp1 HG03017.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03942.hp2 NA18522.hp1 NA19004.hp2 NA19090.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0010 a0001c0001 a0001c0002 a0001c0010	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(6): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0002t0009 a0001c0002t0025 a0001c0010t0008	a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0002t0001g0019 others(22): Show a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0002t0001g0019 a0001c0002t0001g0033 a0001c0002t0001g0038 a0001c0002t0001g0063 a0001c0002t0001g0065 a0001c0002t0001g0068 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 a0001c0002t0001g0090 a0001c0002t0001g0107 a0001c0002t0002g0035 a0001c0002t0002g0072 a0001c0002t0002g0078 a0001c0002t0002g0079 a0001c0002t0003g0142 a0001c0002t0005g0167 a0001c0002t0005g0181 a0001c0002t0007g0128 a0001c0002t0007g0164 a0001c0002t0009g0014 a0001c0002t0025g0237 a0001c0010t0008g0194	25	240	0.1042	-14	c.749 others(31): Show c.749-3944_749-3931delGTGTGTGTGTGTAT	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	6/17			chr10	TogoVar
FGFR2_chr10_121473332_121603444	121560615	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	240	0.0042	-14	c.454 others(31): Show c.454+3873_454+3886delTTTTTTTTTTTTTT	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	4/17			chr10	TogoVar
FGFR3_chr4_1788293_1813867	1788398	CCCCTCCC others(7): Show CCCCTCCCTGGCCAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00609.hp2 HG00621.hp2 others(7): Show HG00438.hp2 HG00609.hp2 HG00621.hp2 HG00673.hp2 NA18945.hp1 NA18954.hp2 NA18966.hp1 NA18989.hp1 NA18998.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0001c0018	a0001c0001t0001 a0001c0002t0001 a0001c0006t0002 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0006t0002 a0001c0018t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0023 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0023 a0001c0001t0001g0069 a0001c0001t0001g0082 a0001c0002t0001g0099 a0001c0006t0002g0059 a0001c0018t0001g0002	10	380	0.0263	-14	c.-51 others(25): Show c.-5169_-5156delCCCTCCCTGGCCAG	FGFR3	ENSG00000068078.20	transcript	ENST00000440486.8	protein_coding		4894		chr4	TogoVar
FGFR4_chr5_177081915_177103144	177084650	CACACACA others(7): Show CACACACATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00423.hp2 HG00438.hp1 others(107): Show HG00280.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00609.hp1 HG00673.hp1 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01175.hp1 HG01192.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02074.hp1 HG02129.hp2 HG02132.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02683.hp1 HG02698.hp2 HG02735.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03704.hp2 HG03710.hp2 HG03834.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 NA18612.hp1 NA18747.hp2 NA18941.hp2 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18947.hp2 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18962.hp1 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp2 NA18979.hp2 NA18982.hp2 NA18983.hp2 NA18986.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA19000.hp2 NA19002.hp1 NA19005.hp2 NA19009.hp1 NA19010.hp2 NA19012.hp1 NA19057.hp2 NA19062.hp2 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp2 NA19085.hp2 NA19089.hp2 NA19091.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp2	a0002 a0005 a0007 others(3): Show a0002 a0005 a0007 a0008 a0009 a0010	a0002c0002 a0002c0014 a0002c0016 others(5): Show a0002c0002 a0002c0014 a0002c0016 a0005c0008 a0007c0015 a0008c0013 a0009c0018 a0010c0012	a0002c0002t0001 a0002c0002t0004 a0002c0014t0001 others(6): Show a0002c0002t0001 a0002c0002t0004 a0002c0014t0001 a0002c0016t0001 a0005c0008t0001 a0007c0015t0007 a0008c0013t0001 a0009c0018t0001 a0010c0012t0001	a0002c0002t0001g0004 a0002c0002t0001g0006 a0002c0002t0001g0015 others(81): Show a0002c0002t0001g0004 a0002c0002t0001g0006 a0002c0002t0001g0015 a0002c0002t0001g0019 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0043 a0002c0002t0001g0063 a0002c0002t0001g0064 a0002c0002t0001g0116 a0002c0002t0001g0117 a0002c0002t0001g0118 a0002c0002t0001g0119 a0002c0002t0001g0122 a0002c0002t0001g0123 a0002c0002t0001g0124 a0002c0002t0001g0125 a0002c0002t0001g0126 a0002c0002t0001g0127 a0002c0002t0001g0128 a0002c0002t0001g0130 a0002c0002t0001g0132 a0002c0002t0001g0133 a0002c0002t0001g0134 a0002c0002t0001g0136 a0002c0002t0001g0137 a0002c0002t0001g0138 a0002c0002t0001g0139 a0002c0002t0001g0140 a0002c0002t0001g0141 a0002c0002t0001g0142 a0002c0002t0001g0143 a0002c0002t0001g0144 a0002c0002t0001g0145 a0002c0002t0001g0146 a0002c0002t0001g0148 a0002c0002t0001g0149 a0002c0002t0001g0150 a0002c0002t0001g0151 a0002c0002t0001g0152 a0002c0002t0001g0153 a0002c0002t0001g0154 a0002c0002t0001g0156 a0002c0002t0001g0157 a0002c0002t0001g0158 a0002c0002t0001g0159 a0002c0002t0001g0160 a0002c0002t0001g0161 a0002c0002t0001g0162 a0002c0002t0001g0163 a0002c0002t0001g0164 a0002c0002t0001g0166 a0002c0002t0001g0167 a0002c0002t0001g0168 a0002c0002t0001g0169 a0002c0002t0001g0170 a0002c0002t0001g0171 a0002c0002t0001g0173 a0002c0002t0001g0174 a0002c0002t0001g0175 a0002c0002t0001g0176 a0002c0002t0001g0184 a0002c0002t0001g0185 a0002c0002t0001g0215 a0002c0002t0004g0006 a0002c0002t0004g0155 a0002c0014t0001g0121 a0002c0016t0001g0010 a0005c0008t0001g0010 a0005c0008t0001g0019 a0005c0008t0001g0034 a0005c0008t0001g0183 a0007c0015t0007g0036 a0008c0013t0001g0177 a0009c0018t0001g0187 a0010c0012t0001g0172	110	372	0.2957	-14	c.-24 others(25): Show c.-2480_-2467delACACACATATATAT	FGFR4	ENSG00000160867.15	transcript	ENST00000292408.9	protein_coding		2264		chr5	TogoVar
FGFR4_chr5_177081915_177103144	177092872	TTGGCCTG others(7): Show TTGGCCTGTGGGGTC	T T	intron_variant intron_variant	MODIFIER	HG01928.hp2 HG01975.hp2 HG01928.hp2 HG01975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	2	372	0.0054	-14	c.105 others(30): Show c.1057+96_1057+109delTGGGGTCTGGCCTG	FGFR4	ENSG00000160867.15	transcript	ENST00000292408.9	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
FGFRL1_chr4_1006626_1031898	1010730	AGCCCTGC others(7): Show AGCCCTGCGTGCTGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0016 a0016	a0016c0030 a0016c0030	a0016c0030t0002 a0016c0030t0002	a0016c0030t0002g0102 a0016c0030t0002g0102	1	414	0.0024	-14	c.-12 others(25): Show c.-1240_-1227delGCCCTGCGTGCTGG	FGFRL1	ENSG00000127418.15	transcript	ENST00000510644.6	protein_coding		895		chr4	TogoVar
FGGY_chr1_59292094_59767730	59381628	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01070.hp2 HG01175.hp1 others(29): Show HG00438.hp1 HG01070.hp2 HG01175.hp1 HG01175.hp2 HG01496.hp1 HG01517.hp1 HG02027.hp1 HG02071.hp1 HG02074.hp1 HG02135.hp1 HG02148.hp1 HG02165.hp1 HG02683.hp1 HG02717.hp2 HG02738.hp1 HG02818.hp1 HG02886.hp1 HG03139.hp2 HG03239.hp2 HG03490.hp2 HG03831.hp2 HG03942.hp1 HG04228.hp1 NA18962.hp2 NA18965.hp1 NA18979.hp1 NA18982.hp2 NA18994.hp2 NA19003.hp2 NA19063.hp2 NA19091.hp1 NA19240.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0001 a0002c0004 a0004c0006 others(1): Show a0001c0001 a0002c0004 a0004c0006 a0007c0007	a0001c0001t0001 a0001c0001t0002 a0002c0004t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0002c0004t0001 a0004c0006t0002 a0007c0007t0001	a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 others(29): Show a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0002g0113 a0001c0001t0002g0157 a0002c0004t0001g0070 a0002c0004t0001g0086 a0004c0006t0002g0033 a0007c0007t0001g0101	32	166	0.1928	-14	c.554 others(31): Show c.554+2820_554+2833delGTGTGTGTGTGTGT	FGGY	ENSG00000172456.18	transcript	ENST00000303721.12	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
FGGY_chr1_59292094_59767730	59435745	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02257.hp1 HG02723.hp2 others(4): Show HG01891.hp2 HG02257.hp1 HG02723.hp2 HG02897.hp2 HG02922.hp2 HG03041.hp1 NA20300.hp1	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0001c0003 a0002c0004 others(1): Show a0001c0001 a0001c0003 a0002c0004 a0010c0013	a0001c0001t0001 a0001c0003t0003 a0002c0004t0002 others(1): Show a0001c0001t0001 a0001c0003t0003 a0002c0004t0002 a0010c0013t0001	a0001c0001t0001g0045 a0001c0001t0001g0102 a0001c0003t0003g0014 others(4): Show a0001c0001t0001g0045 a0001c0001t0001g0102 a0001c0003t0003g0014 a0001c0003t0003g0016 a0001c0003t0003g0017 a0002c0004t0002g0116 a0010c0013t0001g0030	7	166	0.0422	-14	c.555 others(33): Show c.555-21187_555-21174delGTGTGTGTGTGTGT	FGGY	ENSG00000172456.18	transcript	ENST00000303721.12	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
FGGY_chr1_59292094_59767730	59493096	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG03209.hp1 NA21309.hp1 HG02615.hp2 HG03209.hp1 NA21309.hp1	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0002c0002 a0009c0011 a0001c0001 a0002c0002 a0009c0011	a0001c0001t0001 a0002c0002t0001 a0009c0011t0001 a0001c0001t0001 a0002c0002t0001 a0009c0011t0001	a0001c0001t0001g0111 a0002c0002t0001g0062 a0009c0011t0001g0130 a0001c0001t0001g0111 a0002c0002t0001g0062 a0009c0011t0001g0130	3	166	0.0181	-14	c.671 others(33): Show c.671-19193_671-19180delCACACACACACACA	FGGY	ENSG00000172456.18	transcript	ENST00000303721.12	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
FGGY_chr1_59292094_59767730	59627479	TATATATA others(7): Show TATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02559.hp1 HG02630.hp2 others(4): Show HG02145.hp1 HG02559.hp1 HG02630.hp2 HG03209.hp1 HG03225.hp1 NA20129.hp2 NA20300.hp2	a0001 a0005 a0008 others(1): Show a0001 a0005 a0008 a0009	a0001c0001 a0001c0003 a0001c0015 others(3): Show a0001c0001 a0001c0003 a0001c0015 a0005c0008 a0008c0010 a0009c0011	a0001c0001t0002 a0001c0001t0003 a0001c0003t0001 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0003t0001 a0001c0015t0002 a0005c0008t0001 a0008c0010t0001 a0009c0011t0001	a0001c0001t0002g0032 a0001c0001t0003g0018 a0001c0003t0001g0128 others(4): Show a0001c0001t0002g0032 a0001c0001t0003g0018 a0001c0003t0001g0128 a0001c0015t0002g0132 a0005c0008t0001g0080 a0008c0010t0001g0131 a0009c0011t0001g0130	7	166	0.0422	-14	c.107 others(33): Show c.1073+1432_1073+1445delTATATATATACACA	FGGY	ENSG00000172456.18	transcript	ENST00000303721.12	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
FGGY_chr1_59292094_59767730	59753467	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02622.hp2 HG03486.hp1 others(2): Show HG02258.hp2 HG02622.hp2 HG03486.hp1 HG04228.hp1 NA19003.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0016 others(1): Show a0001c0001 a0001c0003 a0002c0016 a0003c0005	a0001c0001t0001 a0001c0003t0001 a0002c0016t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0002c0016t0001 a0003c0005t0004	a0001c0001t0001g0040 a0001c0001t0001g0152 a0001c0003t0001g0153 others(2): Show a0001c0001t0001g0040 a0001c0001t0001g0152 a0001c0003t0001g0153 a0002c0016t0001g0054 a0003c0005t0004g0008	5	166	0.0301	-14	c.151 others(33): Show c.1513-4431_1513-4418delATATATATATATAT	FGGY	ENSG00000172456.18	transcript	ENST00000303721.12	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
FGL1_chr8_17859389_17900524	17875521	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 NA18963.hp1 NA18997.hp2 others(3): Show HG00140.hp1 NA18963.hp1 NA18997.hp2 NA19086.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	a0002 a0003 a0005 a0002 a0003 a0005	a0002c0002 a0003c0003 a0005c0005 a0002c0002 a0003c0003 a0005c0005	a0002c0002t0001 a0003c0003t0001 a0005c0005t0001 a0002c0002t0001 a0003c0003t0001 a0005c0005t0001	a0002c0002t0001g0082 a0002c0002t0001g0127 a0002c0002t0001g0128 others(3): Show a0002c0002t0001g0082 a0002c0002t0001g0127 a0002c0002t0001g0128 a0002c0002t0001g0143 a0003c0003t0001g0283 a0005c0005t0001g0264	6	366	0.0164	-14	c.245 others(31): Show c.245-1014_245-1001delGAAAGAAAGAAAGA	FGL1	ENSG00000104760.17	transcript	ENST00000427924.5	protein_coding	3/7			chr8	TogoVar
FGR_chr1_27607064_27640185	27608841	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 NA19043.hp2 HG00741.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0153 a0001c0001t0001g0206 a0001c0001t0001g0153 a0001c0001t0001g0206	2	278	0.0072	-14	c.40 others(25): Show c.4059_*4072delACACACACACACAC	FGR	ENSG00000000938.13	transcript	ENST00000374005.8	protein_coding		3222		chr1	TogoVar
FGR_chr1_27607064_27640185	27628516	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02615.hp2 HG02622.hp2 others(3): Show HG02055.hp1 HG02615.hp2 HG02622.hp2 HG02723.hp2 HG03195.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0147 a0001c0001t0001g0148 others(1): Show a0001c0001t0001g0009 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149	6	278	0.0216	-14	c.-76 others(31): Show c.-76-3379_-76-3366delGTGTGTGTGTGTGT	FGR	ENSG00000000938.13	transcript	ENST00000374005.8	protein_coding	1/12			chr1	TogoVar
FHAD1_chr1_15242223_15403328	15253148	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA18966.hp1 NA18966.hp1	a0008 a0008	a0008c0122 a0008c0122	a0008c0122t0009 a0008c0122t0009	a0008c0122t0009g0215 a0008c0122t0009g0215	1	294	0.0034	-14	c.93+ others(29): Show c.93+1295_93+1308delGTGTGTGTGTGTGT	FHAD1	ENSG00000142621.21	transcript	ENST00000688493.1	protein_coding	2/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
FHDC1_chr4_152931323_152984671	152931455	AACACACA others(7): Show AACACACACACACAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00741.hp2 others(28): Show HG00099.hp1 HG00280.hp1 HG00741.hp2 HG01175.hp1 HG01192.hp1 HG01261.hp1 HG01346.hp2 HG01884.hp2 HG01891.hp1 HG02258.hp2 HG02280.hp2 HG02572.hp2 HG02622.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp2 HG02886.hp2 HG02896.hp2 HG03041.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp2 HG03471.hp1 HG04115.hp2 NA18953.hp2 NA18968.hp2 NA18981.hp2 NA18982.hp1 NA19030.hp1 NA20129.hp1	a0001 a0002 a0010 others(2): Show a0001 a0002 a0010 a0028 a0029	a0001c0002 a0001c0005 a0001c0010 others(4): Show a0001c0002 a0001c0005 a0001c0010 a0002c0001 a0010c0014 a0028c0035 a0029c0048	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(11): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0007 a0001c0002t0018 a0001c0005t0002 a0001c0005t0004 a0001c0010t0003 a0002c0001t0001 a0002c0001t0038 a0010c0014t0013 a0028c0035t0001 a0029c0048t0001	a0001c0002t0001g0269 a0001c0002t0002g0250 a0001c0002t0002g0256 others(28): Show a0001c0002t0001g0269 a0001c0002t0002g0250 a0001c0002t0002g0256 a0001c0002t0003g0247 a0001c0002t0003g0287 a0001c0002t0003g0308 a0001c0002t0003g0338 a0001c0002t0003g0339 a0001c0002t0003g0340 a0001c0002t0006g0337 a0001c0002t0007g0336 a0001c0002t0007g0342 a0001c0002t0018g0380 a0001c0002t0018g0381 a0001c0005t0002g0304 a0001c0005t0004g0332 a0001c0010t0003g0286 a0001c0010t0003g0315 a0002c0001t0001g0268 a0002c0001t0001g0273 a0002c0001t0001g0318 a0002c0001t0001g0323 a0002c0001t0001g0326 a0002c0001t0001g0330 a0002c0001t0001g0331 a0002c0001t0001g0335 a0002c0001t0038g0321 a0010c0014t0013g0209 a0010c0014t0013g0382 a0028c0035t0001g0341 a0029c0048t0001g0262	31	438	0.0708	-14	c.-50 others(25): Show c.-5084_-5071delACACACACACACAC	FHDC1	ENSG00000137460.10	transcript	ENST00000511601.6	protein_coding		4867		chr4	TogoVar
FHDC1_chr4_152931323_152984671	152949493	AAATAAAA others(7): Show AAATAAAAAGTTATG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0039 a0001c0002t0039	a0001c0002t0039g0171 a0001c0002t0039g0171	1	438	0.0023	-14	c.499 others(31): Show c.499-4004_499-3991delATAAAAAGTTATGA	FHDC1	ENSG00000137460.10	transcript	ENST00000511601.6	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
FHDC1_chr4_152931323_152984671	152963769	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02818.hp2 HG02922.hp1 HG01884.hp2 HG02818.hp2 HG02922.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0006c0039 a0001c0002 a0006c0039	a0001c0002t0004 a0001c0002t0006 a0006c0039t0046 a0001c0002t0004 a0001c0002t0006 a0006c0039t0046	a0001c0002t0004g0137 a0001c0002t0006g0337 a0006c0039t0046g0138 a0001c0002t0004g0137 a0001c0002t0006g0337 a0006c0039t0046g0138	3	438	0.0069	-14	c.102 others(31): Show c.1029+660_1029+673delTTTTTTTTTTTTTT	FHDC1	ENSG00000137460.10	transcript	ENST00000511601.6	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
FHIP1A_chr4_151404176_151675503	151419568	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01175.hp2 HG01074.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0140 a0001c0001t0019g0141 a0001c0001t0019g0140 a0001c0001t0019g0141	2	252	0.0079	-14	c.-35 others(35): Show c.-356+10124_-356+10137delTTTTTTTTTTTTTT	FHIP1A	ENSG00000164142.16	transcript	ENST00000435205.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FHIP2B_chr8_22084150_22109911	22091240	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(239): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp2 HG00438.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18947.hp1 NA18954.hp2 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18977.hp1 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp2 NA18993.hp2 NA18995.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19057.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0006 a0007 a0009 a0011 a0012 a0014 a0015	a0001c0001 a0001c0004 a0001c0023 others(11): Show a0001c0001 a0001c0004 a0001c0023 a0002c0002 a0002c0005 a0003c0003 a0003c0019 a0006c0007 a0007c0008 a0009c0013 a0011c0017 a0012c0020 a0014c0016 a0015c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(36): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0001t0014 a0001c0001t0018 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0029 a0001c0001t0033 a0001c0001t0036 a0001c0001t0039 a0001c0004t0002 a0001c0023t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0007 a0002c0002t0016 a0002c0002t0037 a0002c0002t0038 a0002c0005t0001 a0003c0003t0001 a0003c0019t0004 a0006c0007t0002 a0007c0008t0008 a0007c0008t0030 a0009c0013t0002 a0011c0017t0002 a0012c0020t0002 a0014c0016t0001 a0015c0015t0001	a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0019 others(140): Show a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0048 a0001c0001t0001g0056 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0201 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0016 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0031 a0001c0001t0002g0033 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0047 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0058 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0112 a0001c0001t0002g0115 a0001c0001t0002g0117 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0129 a0001c0001t0002g0137 a0001c0001t0002g0142 a0001c0001t0002g0146 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0196 a0001c0001t0003g0001 a0001c0001t0003g0006 a0001c0001t0003g0011 a0001c0001t0003g0016 a0001c0001t0003g0024 a0001c0001t0003g0080 a0001c0001t0003g0089 a0001c0001t0003g0111 a0001c0001t0003g0114 a0001c0001t0003g0124 a0001c0001t0003g0156 a0001c0001t0004g0001 a0001c0001t0004g0006 a0001c0001t0004g0037 a0001c0001t0004g0097 a0001c0001t0004g0106 a0001c0001t0005g0010 a0001c0001t0005g0032 a0001c0001t0005g0034 a0001c0001t0005g0066 a0001c0001t0007g0006 a0001c0001t0007g0203 a0001c0001t0008g0139 a0001c0001t0008g0190 a0001c0001t0012g0023 a0001c0001t0014g0147 a0001c0001t0018g0157 a0001c0001t0022g0072 a0001c0001t0023g0118 a0001c0001t0024g0038 a0001c0001t0025g0038 a0001c0001t0026g0085 a0001c0001t0027g0003 a0001c0001t0029g0099 a0001c0001t0033g0093 a0001c0001t0036g0052 a0001c0001t0039g0197 a0001c0004t0002g0001 a0001c0004t0002g0007 a0001c0004t0002g0012 a0001c0004t0002g0075 a0001c0004t0002g0143 a0001c0023t0002g0110 a0002c0002t0001g0004 a0002c0002t0001g0025 a0002c0002t0001g0039 a0002c0002t0001g0079 a0002c0002t0001g0094 a0002c0002t0001g0128 a0002c0002t0001g0130 a0002c0002t0001g0153 a0002c0002t0001g0154 a0002c0002t0002g0113 a0002c0002t0002g0141 a0002c0002t0007g0145 a0002c0002t0016g0155 a0002c0002t0037g0076 a0002c0002t0038g0049 a0002c0005t0001g0053 a0003c0003t0001g0088 a0003c0019t0004g0116 a0006c0007t0002g0057 a0006c0007t0002g0068 a0007c0008t0008g0140 a0007c0008t0030g0107 a0009c0013t0002g0120 a0011c0017t0002g0119 a0012c0020t0002g0144 a0014c0016t0001g0152 a0015c0015t0001g0064	242	394	0.6142	-14	c.45+ others(29): Show c.45+1958_45+1971delTTTTTTTTTTTTTT	FHIP2B	ENSG00000158863.22	transcript	ENST00000289921.8	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr8	TogoVar
FHIT_chr3_59742277_61256452	59787481	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02622.hp2 HG02257.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0029 a0001c0001t0010g0018 a0001c0001t0001g0029 a0001c0001t0010g0018	2	46	0.0435	-14	c.349 others(33): Show c.349-35174_349-35161delGTGTGTGTGTGTGT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	8/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	59898442	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	46	0.0217	-14	c.348 others(33): Show c.348+23890_348+23903delCACACACACACACA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	8/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60009163	TTATGTGT others(7): Show TTATGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02622.hp2 HG03139.hp1 HG01981.hp2 HG02622.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0001 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0029 a0001c0001t0004g0043 a0001c0001t0005g0028 a0001c0001t0001g0029 a0001c0001t0004g0043 a0001c0001t0005g0028	3	46	0.0652	-14	c.279 others(31): Show c.279+2194_279+2207delCACACACACACATA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	7/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60009165	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0026 a0001c0001t0003g0026	1	46	0.0217	-14	c.279 others(31): Show c.279+2192_279+2205delCACACACACACACA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	7/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60066630	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02622.hp1 HG02145.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0035 a0001c0001t0001g0012 a0001c0001t0001g0035	2	46	0.0435	-14	c.104 others(33): Show c.104-52492_104-52479delAAAAAAAAAAAAAA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60123962	CTAAAAAT others(7): Show CTAAAAATATATATA	C C	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0016 a0001c0001t0003g0016	1	46	0.0217	-14	c.104 others(35): Show c.104-109824_104-109811delTATATATATTTTTA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60308496	GTATATAT others(7): Show GTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	46	0.0217	-14	c.103 others(35): Show c.103+228350_103+228363delTATATATATATATA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60418372	GTGTGTAT others(7): Show GTGTGTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03139.hp1 NA20905.hp1 HG02145.hp1 HG03139.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0001t0006 a0001c0002t0001 a0001c0001t0005 a0001c0001t0006 a0001c0002t0001	a0001c0001t0005g0028 a0001c0001t0006g0039 a0001c0002t0001g0031 a0001c0001t0005g0028 a0001c0001t0006g0039 a0001c0002t0001g0031	3	46	0.0652	-14	c.103 others(35): Show c.103+118474_103+118487delTATATATATACACA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60418374	GTGTATAT others(7): Show GTGTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02622.hp2 HG03225.hp1 others(2): Show HG00639.hp1 HG02622.hp2 HG03225.hp1 NA18906.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 a0001c0002t0006	a0001c0001t0001g0029 a0001c0001t0002g0015 a0001c0001t0002g0046 others(2): Show a0001c0001t0001g0029 a0001c0001t0002g0015 a0001c0001t0002g0046 a0001c0002t0002g0032 a0001c0002t0006g0041	5	46	0.1087	-14	c.103 others(35): Show c.103+118472_103+118485delTATATATATATACA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60524197	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01167.hp1 HG02145.hp1 HG00639.hp1 HG01167.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0006 a0001c0002t0002 a0001c0003t0004 a0001c0001t0006 a0001c0002t0002 a0001c0003t0004	a0001c0001t0006g0039 a0001c0002t0002g0032 a0001c0003t0004g0038 a0001c0001t0006g0039 a0001c0002t0002g0032 a0001c0003t0004g0038	3	46	0.0652	-14	c.103 others(33): Show c.103+12649_103+12662delGTGTGTGTGTGTGT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60628936	TAGCTTGC others(7): Show TAGCTTGCCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG00735.hp2 others(24): Show HG00639.hp1 HG00639.hp2 HG00735.hp2 HG01071.hp1 HG01167.hp1 HG01169.hp1 HG01981.hp1 HG01981.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02300.hp1 HG02300.hp2 HG02630.hp2 HG02723.hp1 HG03017.hp1 HG03017.hp2 HG03225.hp2 HG06807.hp1 NA18522.hp2 NA18906.hp1 NA19043.hp1 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006 a0001c0003t0003 a0001c0003t0004	a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0012 others(24): Show a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0034 a0001c0001t0001g0042 a0001c0001t0002g0002 a0001c0001t0002g0021 a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0003g0016 a0001c0001t0004g0011 a0001c0001t0004g0043 a0001c0001t0006g0039 a0001c0001t0007g0007 a0001c0001t0007g0008 a0001c0001t0008g0036 a0001c0001t0010g0018 a0001c0001t0011g0004 a0001c0001t0013g0003 a0001c0001t0015g0010 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0032 a0001c0002t0006g0041 a0001c0003t0003g0024 a0001c0003t0004g0038	27	46	0.5870	-14	c.-17 others(33): Show c.-17-91971_-17-91958delGAGAGAGGCAAGCT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	4/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60772314	CTATATAT others(7): Show CTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG01167.hp1 others(4): Show HG00639.hp1 HG00639.hp2 HG01167.hp1 HG01981.hp1 HG03017.hp1 HG03017.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0003t0003 a0001c0003t0004	a0001c0001t0001g0009 a0001c0001t0001g0042 a0001c0002t0001g0030 others(4): Show a0001c0001t0001g0009 a0001c0001t0001g0042 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0032 a0001c0003t0003g0024 a0001c0003t0004g0038	7	46	0.1522	-14	c.-18 others(33): Show c.-18+49591_-18+49604delTATATATATATATA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	4/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60785894	AAGACACA others(7): Show AAGACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02622.hp1 HG02258.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0035 a0001c0001t0002g0021 a0001c0001t0001g0035 a0001c0001t0002g0021	2	46	0.0435	-14	c.-18 others(33): Show c.-18+36011_-18+36024delGTGTGTGTGTGTCT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	4/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60842613	ACATATAT others(7): Show ACATATATATATGAG	A A	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0008 a0001c0001t0007g0008	1	46	0.0217	-14	c.-11 others(35): Show c.-110-20616_-110-20603delCTCATATATATATG	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	3/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60859723	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02622.hp1 HG02258.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0035 a0001c0001t0002g0021 a0001c0001t0001g0035 a0001c0001t0002g0021	2	46	0.0435	-14	c.-11 others(35): Show c.-110-37726_-110-37713delAAAAAAAAAAAAAA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	3/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	61249933	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0030 a0001c0002t0001g0030	1	46	0.0217	-14	c.-21 others(33): Show c.-213+1354_-213+1367delGTGTGTGTGTGTGT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	1/9			chr3	TogoVar
FHL1_chrX_136142533_136216354	136177013	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0175 a0001c0001t0002g0175	1	212	0.0047	-14	c.-27 others(31): Show c.-27+7053_-27+7066delCACACACACACACA	FHL1	ENSG00000022267.19	transcript	ENST00000394155.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chrX	TogoVar
FHL1_chrX_136142533_136216354	136186877	TATATAGA others(7): Show TATATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0021	1	212	0.0047	-14	c.-27 others(33): Show c.-27+16901_-27+16914delTAGATAGATAGATA	FHL1	ENSG00000022267.19	transcript	ENST00000394155.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chrX	TogoVar
FHL3_chr1_37991770_38010514	38006960	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG02630.hp1 NA19003.hp1 HG01884.hp2 HG02630.hp1 NA19003.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0001 a0001c0002t0002	a0001c0002t0001g0009 a0001c0002t0002g0033 a0001c0002t0001g0009 a0001c0002t0002g0033	3	458	0.0066	-14	c.-16 others(25): Show c.-1638_-1625delAAAAAAAAAAAAAA	FHL3	ENSG00000183386.10	transcript	ENST00000373016.4	protein_coding		1447		chr1	TogoVar
FHL5_chr6_96558128_96623626	96594227	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01074.hp2 HG01123.hp1 others(35): Show HG00423.hp1 HG01074.hp2 HG01123.hp1 HG01255.hp2 HG01256.hp2 HG01358.hp2 HG01433.hp2 HG01515.hp1 HG01517.hp2 HG01952.hp1 HG02080.hp1 HG02132.hp2 HG02165.hp2 HG02257.hp2 HG02300.hp1 HG02559.hp2 HG02602.hp1 HG02698.hp2 HG02738.hp2 HG02809.hp1 HG02976.hp1 HG03688.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp2 NA18952.hp1 NA18956.hp2 NA18963.hp1 NA18970.hp1 NA18980.hp1 NA19000.hp1 NA19056.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19084.hp1 NA19086.hp2 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0002 a0001c0004t0003 a0002c0002t0001 a0001c0001t0002 a0001c0004t0003 a0002c0002t0001	a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 others(26): Show a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0017 a0001c0001t0002g0060 a0001c0001t0002g0069 a0001c0001t0002g0080 a0001c0001t0002g0089 a0001c0001t0002g0092 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0004t0003g0009 a0001c0004t0003g0033 a0001c0004t0003g0034 a0001c0004t0003g0036 a0001c0004t0003g0289 a0001c0004t0003g0290 a0001c0004t0003g0291 a0001c0004t0003g0292 a0001c0004t0003g0298 a0001c0004t0003g0303 a0001c0004t0003g0304 a0001c0004t0003g0307 a0001c0004t0003g0309 a0001c0004t0003g0310 a0002c0002t0001g0152	38	378	0.1005	-14	c.-12 others(31): Show c.-12-9341_-12-9328delATATATATATATAT	FHL5	ENSG00000112214.11	transcript	ENST00000450218.6	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr6	TogoVar
FHL5_chr6_96558128_96623626	96594261	ATATATAT others(7): Show ATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0074 a0001c0001t0002g0074	1	378	0.0027	-14	c.-12 others(31): Show c.-12-9337_-12-9324delATATATATATGTAT	FHL5	ENSG00000112214.11	transcript	ENST00000450218.6	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr6	TogoVar
FHOD3_chr18_36292713_36785220	36359510	ACGTTGTC others(7): Show ACGTTGTCATTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0144 a0001c0001t0001g0144	1	168	0.0060	-14	c.272 others(31): Show c.272+3866_272+3879delCGTTGTCATTGTGT	FHOD3	ENSG00000134775.16	transcript	ENST00000590592.6	protein_coding	2/28			chr18	TogoVar
FHOD3_chr18_36292713_36785220	36369440	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG03130.hp1 HG01884.hp2 HG03130.hp1	a0001 a0003 a0001 a0003	a0001c0021 a0003c0005 a0001c0021 a0003c0005	a0001c0021t0001 a0003c0005t0001 a0001c0021t0001 a0003c0005t0001	a0001c0021t0001g0066 a0003c0005t0001g0067 a0001c0021t0001g0066 a0003c0005t0001g0067	2	168	0.0119	-14	c.273 others(31): Show c.273-3194_273-3181delCACACACACACACA	FHOD3	ENSG00000134775.16	transcript	ENST00000590592.6	protein_coding	2/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
FHOD3_chr18_36292713_36785220	36369486	CACACACA others(7): Show CACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0040 a0001c0004t0001g0040	1	168	0.0060	-14	c.273 others(31): Show c.273-3192_273-3179delCACACACACACATA	FHOD3	ENSG00000134775.16	transcript	ENST00000590592.6	protein_coding	2/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
FHOD3_chr18_36292713_36785220	36406083	GTTTTTGT others(7): Show GTTTTTGTTTTTGTT	G G	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02965.hp2 HG01496.hp2 HG02965.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0001 a0003c0003t0001 a0002c0002t0001 a0003c0003t0001	a0002c0002t0001g0091 a0003c0003t0001g0090 a0002c0002t0001g0091 a0003c0003t0001g0090	2	168	0.0119	-14	c.337 others(33): Show c.337+33357_337+33370delTTGTTTTTGTTTTT	FHOD3	ENSG00000134775.16	transcript	ENST00000590592.6	protein_coding	3/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
FHOD3_chr18_36292713_36785220	36439521	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02615.hp2 HG02818.hp1 others(2): Show HG01884.hp1 HG02615.hp2 HG02818.hp1 HG02965.hp1 NA18522.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0023	a0001c0001 a0001c0004 a0002c0037 others(2): Show a0001c0001 a0001c0004 a0002c0037 a0003c0003 a0023c0038	a0001c0001t0001 a0001c0004t0001 a0002c0037t0001 others(2): Show a0001c0001t0001 a0001c0004t0001 a0002c0037t0001 a0003c0003t0001 a0023c0038t0001	a0001c0001t0001g0059 a0001c0004t0001g0084 a0002c0037t0001g0168 others(2): Show a0001c0001t0001g0059 a0001c0004t0001g0084 a0002c0037t0001g0168 a0003c0003t0001g0050 a0023c0038t0001g0053	5	168	0.0298	-14	c.338 others(33): Show c.338-62377_338-62364delGTGTGTGTGTGTGT	FHOD3	ENSG00000134775.16	transcript	ENST00000590592.6	protein_coding	3/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
FHOD3_chr18_36292713_36785220	36474986	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02486.hp2 HG02809.hp1 others(5): Show HG02132.hp2 HG02486.hp2 HG02809.hp1 HG02818.hp2 HG02976.hp1 HG03098.hp1 HG03540.hp2 HG03927.hp1	a0001 a0007 a0015 others(1): Show a0001 a0007 a0015 a0017	a0001c0001 a0001c0004 a0001c0043 others(3): Show a0001c0001 a0001c0004 a0001c0043 a0007c0008 a0015c0042 a0017c0034	a0001c0001t0001 a0001c0001t0003 a0001c0004t0002 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0002 a0001c0043t0001 a0007c0008t0001 a0015c0042t0002 a0017c0034t0001	a0001c0001t0001g0063 a0001c0001t0001g0071 a0001c0001t0003g0119 others(5): Show a0001c0001t0001g0063 a0001c0001t0001g0071 a0001c0001t0003g0119 a0001c0004t0002g0105 a0001c0043t0001g0003 a0007c0008t0001g0098 a0015c0042t0002g0106 a0017c0034t0001g0149	8	168	0.0476	-14	c.338 others(33): Show c.338-26911_338-26898delACACACACACACAC	FHOD3	ENSG00000134775.16	transcript	ENST00000590592.6	protein_coding	3/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
FHOD3_chr18_36292713_36785220	36475021	ACACACAC others(7): Show ACACACACACACACT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0127 a0002c0002t0001g0127	1	168	0.0060	-14	c.338 others(33): Show c.338-26909_338-26896delACACACACACACTC	FHOD3	ENSG00000134775.16	transcript	ENST00000590592.6	protein_coding	3/28		INFO_REALIGN_3_PRIME	chr18	TogoVar

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