Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FOXP1_chr3_70949708_71588728	71298474	AAAAAAGA others(7): Show AAAAAAGAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01884.hp1 HG01952.hp1 others(14): Show HG01109.hp1 HG01884.hp1 HG01952.hp1 HG02055.hp1 HG02109.hp2 HG02145.hp2 HG02486.hp2 HG02622.hp2 HG03041.hp2 HG03130.hp2 HG03540.hp2 HG03579.hp1 HG03704.hp1 HG06807.hp2 NA19030.hp1 NA20129.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 others(14): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0023 a0001c0001t0024 a0001c0001t0029 a0001c0001t0031 a0001c0001t0032 a0001c0001t0053 a0001c0001t0057 a0001c0001t0063 a0001c0001t0065 a0001c0001t0068 a0001c0001t0074 a0001c0001t0080 a0001c0001t0083 a0001c0001t0084	a0001c0001t0002g0051 a0001c0001t0005g0004 a0001c0001t0008g0036 others(14): Show a0001c0001t0002g0051 a0001c0001t0005g0004 a0001c0001t0008g0036 a0001c0001t0023g0045 a0001c0001t0024g0055 a0001c0001t0029g0071 a0001c0001t0031g0079 a0001c0001t0032g0089 a0001c0001t0053g0074 a0001c0001t0057g0048 a0001c0001t0063g0060 a0001c0001t0065g0035 a0001c0001t0068g0096 a0001c0001t0074g0069 a0001c0001t0080g0075 a0001c0001t0083g0020 a0001c0001t0084g0061	17	96	0.1771	-14	c.-12 others(31): Show c.-12+1332_-12+1345delCTTTTTTTCTTTTT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71308749	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0073 a0001c0001t0010g0073	1	96	0.0104	-14	c.-72 others(31): Show c.-72-8883_-72-8870delCACACACACACACA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71345397	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp2 HG02572.hp2 others(2): Show HG02257.hp1 HG02257.hp2 HG02572.hp2 HG02723.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0036 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0036 a0001c0001t0037 a0001c0001t0043	a0001c0001t0001g0038 a0001c0001t0007g0065 a0001c0001t0036g0094 others(2): Show a0001c0001t0001g0038 a0001c0001t0007g0065 a0001c0001t0036g0094 a0001c0001t0037g0011 a0001c0001t0043g0053	5	96	0.0521	-14	c.-73 others(33): Show c.-73+13739_-73+13752delGTGTGTGTGTGTGT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71348508	TGTGTGTG others(7): Show TGTGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01496.hp1 HG02818.hp1 HG00735.hp2 HG01496.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0058 a0001c0001t0081 a0001c0001t0046 a0001c0001t0058 a0001c0001t0081	a0001c0001t0046g0017 a0001c0001t0058g0076 a0001c0001t0081g0018 a0001c0001t0046g0017 a0001c0001t0058g0076 a0001c0001t0081g0018	3	96	0.0313	-14	c.-73 others(33): Show c.-73+10628_-73+10641delGCACACACACACAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71416547	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02622.hp1 HG02647.hp2 others(4): Show HG00735.hp1 HG02622.hp1 HG02647.hp2 HG02818.hp2 HG03130.hp1 HG03209.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0014 others(4): Show a0001c0001t0004 a0001c0001t0006 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0021 a0001c0001t0071	a0001c0001t0004g0056 a0001c0001t0006g0092 a0001c0001t0014g0066 others(4): Show a0001c0001t0004g0056 a0001c0001t0006g0092 a0001c0001t0014g0066 a0001c0001t0015g0050 a0001c0001t0017g0052 a0001c0001t0021g0042 a0001c0001t0071g0064	7	96	0.0729	-14	c.-16 others(35): Show c.-167-57317_-167-57304delGTGTGTGTGTGTGT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71434653	TGTGTGTG others(7): Show TGTGTGTGTGTGTAA	T T	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0058 a0001c0001t0054g0058	1	96	0.0104	-14	c.-16 others(35): Show c.-168+58759_-168+58772delTTACACACACACAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP2_chr7_114409815_114698765	114645129	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02615.hp2 HG02970.hp1 HG02280.hp2 HG02615.hp2 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0006 a0001c0001t0002 a0001c0003t0006	a0001c0001t0002g0013 a0001c0003t0006g0149 a0001c0003t0006g0150 a0001c0001t0002g0013 a0001c0003t0006g0149 a0001c0003t0006g0150	3	174	0.0172	-14	c.109 others(31): Show c.1094+377_1094+390delATATATATATATAT	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP3_chrX_49245438_49269710	49256220	AAGAGAGA others(7): Show AAGAGAGAGAGAGAG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01891.hp2 HG02559.hp1 others(3): Show HG01243.hp1 HG01891.hp2 HG02559.hp1 HG02895.hp1 HG02897.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0040 a0001c0001t0001g0050 others(1): Show a0001c0001t0001g0019 a0001c0001t0001g0040 a0001c0001t0001g0050 a0001c0001t0001g0148	6	299	0.0201	-14	c.648 others(29): Show c.648-432_648-419delCTCTCTCTCTCTCT	FOXP3	ENSG00000049768.18	transcript	ENST00000376207.10	protein_coding	6/11			chrX	TogoVar
FOXP4_chr6_41541381_41607384	41568653	GTCTGTGG others(7): Show GTCTGTGGACCACAC	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01109.hp2 HG01069.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	2	356	0.0056	-14	c.204 others(31): Show c.204+2690_204+2703delTCTGTGGACCACAC	FOXP4	ENSG00000137166.18	transcript	ENST00000307972.10	protein_coding	2/16			chr6	TogoVar
FOXR1_chr11_118966761_118986287	118983537	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp2 HG02004.hp1 HG02615.hp2 others(11): Show HG01070.hp2 HG02004.hp1 HG02615.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02895.hp2 HG03098.hp1 HG03540.hp2 HG04199.hp2 NA18906.hp2 NA19030.hp1 NA20129.hp1 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0010 others(4): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0038 a0001c0001t0001g0097 a0003c0004t0001g0005	14	430	0.0326	-14	c.23 others(25): Show c.2302_*2315delTGTGTGTGTGTGTG	FOXR1	ENSG00000176302.13	transcript	ENST00000317011.8	protein_coding		2251		chr11	TogoVar
FPGT_chr1_74193242_74213702	74200497	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00323.hp1 others(150): Show HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01071.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp1 HG01168.hp1 HG01192.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp1 HG01517.hp1 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02074.hp2 HG02080.hp2 HG02109.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02165.hp2 HG02451.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02622.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03209.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp1 HG03654.hp2 HG03669.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp2 NA18941.hp2 NA18944.hp1 NA18946.hp1 NA18947.hp1 NA18950.hp2 NA18952.hp2 NA18953.hp2 NA18957.hp2 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18965.hp2 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18993.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp2 NA19009.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp1 NA19062.hp1 NA19065.hp2 NA19066.hp2 NA19070.hp1 NA19072.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19084.hp2 NA19088.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0008 a0001c0016 others(2): Show a0001c0001 a0001c0008 a0001c0016 a0002c0006 a0008c0010	a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 others(9): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0008t0001 a0001c0016t0001 a0002c0006t0001 a0008c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0015 others(19): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0005g0001 a0001c0001t0011g0001 a0001c0001t0012g0001 a0001c0001t0025g0001 a0001c0001t0026g0029 a0001c0001t0027g0001 a0001c0001t0028g0001 a0001c0008t0001g0001 a0001c0016t0001g0001 a0002c0006t0001g0001 a0008c0010t0001g0001	153	380	0.4026	-14	c.250 others(29): Show c.250+678_250+691delTTTTTTTTTTTTTT	FPGT	ENSG00000254685.8	transcript	ENST00000370898.9	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
FRAS1_chr4_78052323_78549269	78078570	AAAATAAA others(7): Show AAAATAAAGTACAGG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0067 a0067	a0067c0078 a0067c0078	a0067c0078t0013 a0067c0078t0013	a0067c0078t0013g0136 a0067c0078t0013g0136	1	178	0.0056	-14	c.108 others(33): Show c.108+12555_108+12568delAAATAAAGTACAGG	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	2/73			chr4	TogoVar
FRAS1_chr4_78052323_78549269	78250042	ATATAATT others(7): Show ATATAATTTAAAGAC	A A	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0013 a0013	a0013c0009 a0013c0009	a0013c0009t0020 a0013c0009t0020	a0013c0009t0020g0013 a0013c0009t0020g0013	1	178	0.0056	-14	c.310 others(31): Show c.310-2345_310-2332delATTTAAAGACTATA	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	4/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78298018	CTCTCTCT others(7): Show CTCTCTCTCTCTCTA	C C	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04204.hp1 HG04199.hp1 HG04204.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0009 a0003c0002t0002 a0001c0001t0009 a0003c0002t0002	a0001c0001t0009g0125 a0003c0002t0002g0050 a0001c0001t0009g0125 a0003c0002t0002g0050	2	178	0.0112	-14	c.153 others(35): Show c.1535-10046_1535-10033delCTCTCTCTCTCTAT	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	14/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78420879	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02559.hp2 HG02630.hp2 others(2): Show HG02109.hp1 HG02559.hp2 HG02630.hp2 NA18522.hp1 NA19043.hp2	a0009 a0025 a0086 others(1): Show a0009 a0025 a0086 a0091	a0009c0020 a0025c0011 a0086c0110 others(1): Show a0009c0020 a0025c0011 a0086c0110 a0091c0120	a0009c0020t0025 a0025c0011t0004 a0025c0011t0028 others(2): Show a0009c0020t0025 a0025c0011t0004 a0025c0011t0028 a0086c0110t0004 a0091c0120t0039	a0009c0020t0025g0120 a0025c0011t0004g0176 a0025c0011t0028g0161 others(2): Show a0009c0020t0025g0120 a0025c0011t0004g0176 a0025c0011t0028g0161 a0086c0110t0004g0173 a0091c0120t0039g0096	5	178	0.0281	-14	c.454 others(31): Show c.4541-955_4541-942delATATATATATATAT	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	33/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78518448	ATATATTT others(7): Show ATATATTTATTTATT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00597.hp1 HG00673.hp1 others(18): Show HG00280.hp2 HG00597.hp1 HG00673.hp1 HG00738.hp2 HG01891.hp2 HG02055.hp2 HG02071.hp2 HG02293.hp1 HG02451.hp2 HG02738.hp2 HG03017.hp1 HG03471.hp1 HG03704.hp2 HG04184.hp2 NA18941.hp2 NA18950.hp2 NA18962.hp2 NA18983.hp2 NA19070.hp2 NA19240.hp2 homoSapiens_chm13v2.hp1	a0002 a0004 a0005 others(13): Show a0002 a0004 a0005 a0009 a0011 a0013 a0029 a0034 a0035 a0037 a0051 a0055 a0058 a0084 a0092 a0101	a0002c0053 a0004c0018 a0005c0004 others(14): Show a0002c0053 a0004c0018 a0005c0004 a0005c0019 a0009c0096 a0011c0045 a0013c0009 a0029c0032 a0034c0037 a0035c0034 a0037c0058 a0051c0062 a0055c0026 a0058c0086 a0084c0097 a0092c0121 a0101c0074	a0002c0053t0043 a0004c0018t0016 a0005c0004t0003 others(16): Show a0002c0053t0043 a0004c0018t0016 a0005c0004t0003 a0005c0004t0011 a0005c0019t0003 a0005c0019t0029 a0009c0096t0034 a0011c0045t0003 a0013c0009t0020 a0029c0032t0005 a0034c0037t0046 a0035c0034t0003 a0037c0058t0005 a0051c0062t0015 a0055c0026t0003 a0058c0086t0022 a0084c0097t0001 a0092c0121t0012 a0101c0074t0044	a0002c0053t0043g0032 a0004c0018t0016g0131 a0005c0004t0003g0073 others(18): Show a0002c0053t0043g0032 a0004c0018t0016g0131 a0005c0004t0003g0073 a0005c0004t0003g0077 a0005c0004t0011g0137 a0005c0019t0003g0080 a0005c0019t0029g0143 a0009c0096t0034g0141 a0011c0045t0003g0047 a0013c0009t0020g0008 a0013c0009t0020g0013 a0029c0032t0005g0038 a0034c0037t0046g0058 a0035c0034t0003g0014 a0037c0058t0005g0031 a0051c0062t0015g0045 a0055c0026t0003g0063 a0058c0086t0022g0123 a0084c0097t0001g0004 a0092c0121t0012g0154 a0101c0074t0044g0117	21	178	0.1180	-14	c.103 others(33): Show c.10390-879_10390-866delATTTATTTATTTAT	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	66/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FREM1_chr9_14732152_14915428	14774511	ATCTCTCT others(7): Show ATCTCTCTCTCTCTC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02258.hp1 HG02572.hp2 others(11): Show HG00099.hp1 HG02258.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02886.hp2 HG02895.hp2 HG03471.hp1 HG03516.hp2 HG03927.hp1 NA18994.hp2 NA19012.hp1 NA19077.hp1 NA20129.hp2	a0003 a0004 a0012 others(10): Show a0003 a0004 a0012 a0031 a0041 a0043 a0045 a0051 a0061 a0064 a0073 a0075 a0106	a0003c0069 a0004c0004 a0012c0022 others(10): Show a0003c0069 a0004c0004 a0012c0022 a0031c0218 a0041c0115 a0043c0148 a0045c0058 a0051c0092 a0061c0153 a0064c0101 a0073c0111 a0075c0062 a0106c0143	a0003c0069t0004 a0004c0004t0001 a0012c0022t0002 others(10): Show a0003c0069t0004 a0004c0004t0001 a0012c0022t0002 a0031c0218t0002 a0041c0115t0001 a0043c0148t0005 a0045c0058t0004 a0051c0092t0003 a0061c0153t0001 a0064c0101t0003 a0073c0111t0001 a0075c0062t0001 a0106c0143t0001	a0003c0069t0004g0175 a0004c0004t0001g0017 a0004c0004t0001g0082 others(11): Show a0003c0069t0004g0175 a0004c0004t0001g0017 a0004c0004t0001g0082 a0012c0022t0002g0120 a0031c0218t0002g0094 a0041c0115t0001g0250 a0043c0148t0005g0070 a0045c0058t0004g0101 a0051c0092t0003g0051 a0061c0153t0001g0209 a0064c0101t0003g0212 a0073c0111t0001g0118 a0075c0062t0001g0217 a0106c0143t0001g0139	14	346	0.0405	-14	c.485 others(33): Show c.4857+1264_4857+1277delGAGAGAGAGAGAGA	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding	25/36			chr9	TogoVar
FREM1_chr9_14732152_14915428	14778672	GAGGGGAG others(7): Show GAGGGGAGGGAGGGA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02055.hp1 others(4): Show HG01243.hp2 HG01884.hp1 HG02055.hp1 HG02809.hp1 HG02818.hp1 HG03041.hp2 HG03225.hp2	a0028 a0039 a0040 others(4): Show a0028 a0039 a0040 a0067 a0078 a0087 a0110	a0028c0174 a0039c0137 a0040c0136 others(4): Show a0028c0174 a0039c0137 a0040c0136 a0067c0165 a0078c0170 a0087c0163 a0110c0219	a0028c0174t0001 a0039c0137t0004 a0040c0136t0001 others(4): Show a0028c0174t0001 a0039c0137t0004 a0040c0136t0001 a0067c0165t0006 a0078c0170t0003 a0087c0163t0001 a0110c0219t0003	a0028c0174t0001g0173 a0039c0137t0004g0057 a0040c0136t0001g0093 others(4): Show a0028c0174t0001g0173 a0039c0137t0004g0057 a0040c0136t0001g0093 a0067c0165t0006g0069 a0078c0170t0003g0049 a0087c0163t0001g0095 a0110c0219t0003g0058	7	346	0.0202	-14	c.444 others(33): Show c.4443-2483_4443-2470delTCCCTCCCTCCCCT	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding	24/36			chr9	TogoVar
FREM1_chr9_14732152_14915428	14861192	TACATATA others(7): Show TACATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02056.hp2 HG02723.hp2 others(7): Show HG02055.hp2 HG02056.hp2 HG02723.hp2 HG03098.hp1 HG03471.hp1 HG03491.hp2 HG03540.hp2 NA18978.hp1 NA19240.hp1 NA20300.hp1	a0008 a0015 a0022 others(6): Show a0008 a0015 a0022 a0028 a0075 a0080 a0090 a0097 a0102	a0008c0006 a0015c0184 a0022c0064 others(7): Show a0008c0006 a0015c0184 a0022c0064 a0022c0213 a0028c0205 a0075c0062 a0080c0061 a0090c0210 a0097c0187 a0102c0063	a0008c0006t0002 a0015c0184t0002 a0022c0064t0001 others(7): Show a0008c0006t0002 a0015c0184t0002 a0022c0064t0001 a0022c0213t0002 a0028c0205t0002 a0075c0062t0001 a0080c0061t0005 a0090c0210t0002 a0097c0187t0002 a0102c0063t0001	a0008c0006t0002g0113 a0015c0184t0002g0174 a0022c0064t0001g0254 others(7): Show a0008c0006t0002g0113 a0015c0184t0002g0174 a0022c0064t0001g0254 a0022c0213t0002g0005 a0028c0205t0002g0234 a0075c0062t0001g0217 a0080c0061t0005g0066 a0090c0210t0002g0332 a0097c0187t0002g0183 a0102c0063t0001g0177	10	346	0.0289	-14	c.330 others(31): Show c.330-1722_330-1709delGTGTGTATATATGT	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding	3/36			chr9	TogoVar
FREM1_chr9_14732152_14915428	14865661	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01516.hp2	a0068 a0068	a0068c0071 a0068c0071	a0068c0071t0001 a0068c0071t0001	a0068c0071t0001g0151 a0068c0071t0001g0151	1	346	0.0029	-14	c.235 others(31): Show c.235-1772_235-1759delCACACACACACACA	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding	2/36			chr9	TogoVar
FREM1_chr9_14732152_14915428	14914072	GTGTGTAT others(7): Show GTGTGTATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG01358.hp2 HG02027.hp1 others(12): Show HG01243.hp1 HG01358.hp2 HG02027.hp1 HG02080.hp2 HG02293.hp1 HG02602.hp1 HG03130.hp2 HG03942.hp1 HG04115.hp1 HG06807.hp1 NA18747.hp1 NA18944.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0007 a0011 a0019 a0021 a0025	a0001c0048 a0001c0123 a0002c0001 others(12): Show a0001c0048 a0001c0123 a0002c0001 a0002c0021 a0003c0007 a0003c0030 a0003c0087 a0004c0031 a0007c0017 a0007c0032 a0011c0200 a0019c0044 a0021c0211 a0021c0212 a0025c0095	a0001c0048t0001 a0001c0123t0001 a0002c0001t0002 others(12): Show a0001c0048t0001 a0001c0123t0001 a0002c0001t0002 a0002c0021t0001 a0003c0007t0001 a0003c0030t0001 a0003c0087t0001 a0004c0031t0001 a0007c0017t0001 a0007c0032t0011 a0011c0200t0002 a0019c0044t0001 a0021c0211t0002 a0021c0212t0002 a0025c0095t0001	a0001c0048t0001g0099 a0001c0123t0001g0166 a0002c0001t0002g0040 others(12): Show a0001c0048t0001g0099 a0001c0123t0001g0166 a0002c0001t0002g0040 a0002c0021t0001g0144 a0003c0007t0001g0327 a0003c0030t0001g0198 a0003c0087t0001g0338 a0004c0031t0001g0140 a0007c0017t0001g0106 a0007c0032t0011g0002 a0011c0200t0002g0131 a0019c0044t0001g0041 a0021c0211t0002g0119 a0021c0212t0002g0039 a0025c0095t0001g0100	15	346	0.0434	-14	c.-44 others(25): Show c.-4440_-4427delTATATATATACACA	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding		3645		chr9	TogoVar
FREM1_chr9_14732152_14915428	14914076	GTATATAT others(7): Show GTATATATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp2 NA19068.hp1 HG02071.hp2 NA19068.hp1	a0023 a0099 a0023 a0099	a0023c0208 a0099c0191 a0023c0208 a0099c0191	a0023c0208t0002 a0099c0191t0002 a0023c0208t0002 a0099c0191t0002	a0023c0208t0002g0083 a0099c0191t0002g0023 a0023c0208t0002g0083 a0099c0191t0002g0023	2	346	0.0058	-14	c.-44 others(25): Show c.-4444_-4431delTATATATATATATA	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding		3649		chr9	TogoVar
FREM2_chr13_38682077_38892131	38709986	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02280.hp2 HG02486.hp2 others(15): Show HG01884.hp2 HG02280.hp2 HG02486.hp2 HG02559.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02809.hp2 HG02886.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03471.hp2	a0001 a0006 a0021 others(2): Show a0001 a0006 a0021 a0051 a0052	a0001c0009 a0001c0012 a0001c0017 others(4): Show a0001c0009 a0001c0012 a0001c0017 a0006c0016 a0021c0044 a0051c0046 a0052c0045	a0001c0009t0008 a0001c0009t0020 a0001c0012t0019 others(8): Show a0001c0009t0008 a0001c0009t0020 a0001c0012t0019 a0001c0012t0050 a0001c0012t0053 a0001c0017t0008 a0001c0017t0055 a0006c0016t0021 a0021c0044t0056 a0051c0046t0051 a0052c0045t0054	a0001c0009t0008g0247 a0001c0009t0008g0253 a0001c0009t0008g0260 others(15): Show a0001c0009t0008g0247 a0001c0009t0008g0253 a0001c0009t0008g0260 a0001c0009t0008g0262 a0001c0009t0020g0248 a0001c0009t0020g0250 a0001c0012t0019g0252 a0001c0012t0019g0259 a0001c0012t0050g0258 a0001c0012t0053g0251 a0001c0017t0008g0249 a0001c0017t0008g0261 a0001c0017t0055g0256 a0006c0016t0021g0246 a0006c0016t0021g0255 a0021c0044t0056g0254 a0051c0046t0051g0245 a0052c0045t0054g0257	18	262	0.0687	-14	c.526 others(35): Show c.5263+12237_5263+12250delCACACACACACACA	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
FREM2_chr13_38682077_38892131	38712650	TCACACAC others(7): Show TCACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0004 a0004	a0004c0089 a0004c0089	a0004c0089t0001 a0004c0089t0001	a0004c0089t0001g0239 a0004c0089t0001g0239	1	262	0.0038	-14	c.526 others(35): Show c.5263+14876_5263+14889delCACACACACACACA	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
FREM2_chr13_38682077_38892131	38779396	TTTAAAAA others(7): Show TTTAAAAAAAGAATA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0054 a0054	a0054c0066 a0054c0066	a0054c0066t0003 a0054c0066t0003	a0054c0066t0003g0051 a0054c0066t0003g0051	1	262	0.0038	-14	c.564 others(33): Show c.5642-3664_5642-3651delGAATATTAAAAAAA	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	4/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
FREM2_chr13_38682077_38892131	38807188	GTTATATA others(7): Show GTTATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02886.hp2 HG02922.hp1 others(2): Show HG01891.hp1 HG02886.hp2 HG02922.hp1 HG03471.hp2 NA19030.hp1	a0001 a0004 a0044 others(1): Show a0001 a0004 a0044 a0053	a0001c0001 a0001c0017 a0004c0007 others(2): Show a0001c0001 a0001c0017 a0004c0007 a0044c0084 a0053c0069	a0001c0001t0018 a0001c0017t0008 a0004c0007t0018 others(2): Show a0001c0001t0018 a0001c0017t0008 a0004c0007t0018 a0044c0084t0009 a0053c0069t0003	a0001c0001t0018g0057 a0001c0017t0008g0261 a0004c0007t0018g0039 others(2): Show a0001c0001t0018g0057 a0001c0017t0008g0261 a0004c0007t0018g0039 a0044c0084t0009g0197 a0053c0069t0003g0108	5	262	0.0191	-14	c.601 others(35): Show c.6019+22381_6019+22394delTTATATATATATAT	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23			chr13	TogoVar
FREM2_chr13_38682077_38892131	38807189	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02280.hp2 NA19240.hp1 HG02280.hp2 NA19240.hp1	a0001 a0015 a0001 a0015	a0001c0012 a0015c0031 a0001c0012 a0015c0031	a0001c0012t0019 a0015c0031t0003 a0001c0012t0019 a0015c0031t0003	a0001c0012t0019g0259 a0015c0031t0003g0129 a0001c0012t0019g0259 a0015c0031t0003g0129	2	262	0.0076	-14	c.601 others(35): Show c.6019+22407_6019+22420delATATATATATATAT	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
FREM2_chr13_38682077_38892131	38813464	TTCTCTCT others(7): Show TTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01516.hp1 HG01517.hp2 others(3): Show HG00738.hp2 HG01516.hp1 HG01517.hp2 HG02965.hp2 HG03486.hp1 NA19057.hp1	a0002 a0008 a0012 others(1): Show a0002 a0008 a0012 a0017	a0002c0006 a0008c0019 a0012c0020 others(1): Show a0002c0006 a0008c0019 a0012c0020 a0017c0034	a0002c0006t0001 a0002c0006t0007 a0008c0019t0003 others(2): Show a0002c0006t0001 a0002c0006t0007 a0008c0019t0003 a0012c0020t0002 a0017c0034t0010	a0002c0006t0001g0096 a0002c0006t0007g0020 a0008c0019t0003g0121 others(3): Show a0002c0006t0001g0096 a0002c0006t0007g0020 a0008c0019t0003g0121 a0012c0020t0002g0126 a0017c0034t0010g0222 a0017c0034t0010g0223	6	262	0.0229	-14	c.601 others(35): Show c.6019+28697_6019+28710delTCTCTCTCTCTCTC	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
FREM2_chr13_38682077_38892131	38813506	CTCTCTCT others(7): Show CTCTCTCTCTCTCCT	C C	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02074.hp2 NA19082.hp2 others(1): Show HG01981.hp2 HG02074.hp2 NA19082.hp2 NA19087.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0001 a0001c0067 a0004c0007 others(1): Show a0001c0001 a0001c0067 a0004c0007 a0007c0037	a0001c0001t0001 a0001c0067t0001 a0004c0007t0001 others(1): Show a0001c0001t0001 a0001c0067t0001 a0004c0007t0001 a0007c0037t0030	a0001c0001t0001g0052 a0001c0067t0001g0182 a0004c0007t0001g0014 others(1): Show a0001c0001t0001g0052 a0001c0067t0001g0182 a0004c0007t0001g0014 a0007c0037t0030g0041	4	262	0.0153	-14	c.601 others(35): Show c.6019+28699_6019+28712delTCTCTCTCTCTCCT	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23			chr13	TogoVar
FREM2_chr13_38682077_38892131	38813508	CTCTCTCT others(7): Show CTCTCTCTCTCCTCT	C C	intron_variant intron_variant	MODIFIER	HG02896.hp1 NA19060.hp2 HG02896.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0001 a0001c0009t0020 a0001c0001t0001 a0001c0009t0020	a0001c0001t0001g0168 a0001c0009t0020g0250 a0001c0001t0001g0168 a0001c0009t0020g0250	2	262	0.0076	-14	c.601 others(35): Show c.6019+28701_6019+28714delTCTCTCTCTCCTCT	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23			chr13	TogoVar
FRG2C_chr3_75659328_75672173	75671878	CGAGAGAG others(7): Show CGAGAGAGAGAGAGA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0004 a0003c0004t0001g0004	1	410	0.0024	-14	c.58 others(25): Show c.5838_*5851delGAGAGAGAGAGAGA	FRG2C	ENSG00000172969.8	transcript	ENST00000308062.8	protein_coding		4706		chr3	TogoVar
FRK_chr6_115926149_116065891	116000223	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0185 a0001c0001t0022g0185	1	274	0.0037	-14	c.466 others(31): Show c.466+3640_466+3653delAAAAAAAAAAAAAA	FRK	ENSG00000111816.8	transcript	ENST00000606080.2	protein_coding	2/7			chr6	TogoVar
FRMD1_chr6_168048095_168084212	168055903	CGGCCTCA others(7): Show CGGCCTCAATGCACG	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0066 a0002c0003t0066	a0002c0003t0066g0212 a0002c0003t0066g0212	1	402	0.0025	-14	c.11 others(25): Show c.1180_*1193delCGTGCATTGAGGCC	FRMD1	ENSG00000153303.18	transcript	ENST00000283309.11	protein_coding	11/11	1180		chr6	TogoVar
FRMD3_chr9_83239622_83543401	83261102	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp2 HG00609.hp1 others(27): Show HG00099.hp2 HG00438.hp2 HG00609.hp1 HG00621.hp1 HG00735.hp1 HG01071.hp1 HG01109.hp1 HG01433.hp2 HG01496.hp1 HG01952.hp1 HG02074.hp2 HG02080.hp1 HG02145.hp2 HG02602.hp1 HG02735.hp1 HG02818.hp1 HG03130.hp1 HG03453.hp2 HG04228.hp2 NA18946.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18980.hp1 NA18986.hp2 NA18988.hp1 NA19064.hp2 NA19066.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0016 a0001c0001t0018 a0001c0001t0025 a0001c0001t0031 a0001c0001t0070 a0001c0002t0003 a0001c0002t0048	a0001c0001t0001g0114 a0001c0001t0004g0096 a0001c0001t0004g0129 others(27): Show a0001c0001t0001g0114 a0001c0001t0004g0096 a0001c0001t0004g0129 a0001c0001t0005g0122 a0001c0001t0005g0133 a0001c0001t0005g0200 a0001c0001t0005g0204 a0001c0001t0005g0214 a0001c0001t0005g0216 a0001c0001t0005g0235 a0001c0001t0005g0240 a0001c0001t0006g0029 a0001c0001t0008g0034 a0001c0001t0008g0079 a0001c0001t0009g0035 a0001c0001t0009g0065 a0001c0001t0009g0067 a0001c0001t0009g0085 a0001c0001t0009g0087 a0001c0001t0016g0031 a0001c0001t0016g0057 a0001c0001t0016g0082 a0001c0001t0018g0099 a0001c0001t0018g0190 a0001c0001t0025g0222 a0001c0001t0031g0170 a0001c0001t0031g0180 a0001c0001t0070g0120 a0001c0002t0003g0027 a0001c0002t0048g0044	30	242	0.1240	-14	c.119 others(35): Show c.1196-12600_1196-12587delGTGTGTGTGTGTGT	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	13/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83357238	AATACATA others(7): Show AATACATACATATAT	A A	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0203 a0001c0001t0004g0203	1	242	0.0041	-14	c.296 others(31): Show c.296-7495_296-7482delATATATGTATGTAT	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	3/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83461665	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02717.hp1 HG02809.hp1 others(4): Show HG02258.hp2 HG02717.hp1 HG02809.hp1 HG02895.hp1 HG02965.hp2 HG03195.hp1 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0006 a0001c0001t0015 others(4): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0015 a0001c0001t0038 a0001c0001t0039 a0001c0001t0056 a0001c0004t0007	a0001c0001t0001g0163 a0001c0001t0006g0080 a0001c0001t0015g0161 others(4): Show a0001c0001t0001g0163 a0001c0001t0006g0080 a0001c0001t0015g0161 a0001c0001t0038g0091 a0001c0001t0039g0092 a0001c0001t0056g0162 a0001c0004t0007g0232	7	242	0.0289	-14	c.148 others(33): Show c.148-71971_148-71958delAAAAAAAAAAAAAA	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83479690	AAGAAAGA others(7): Show AAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp2 HG01891.hp2 HG01243.hp2 HG01884.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0033 a0001c0001t0057 a0001c0001t0013 a0001c0001t0033 a0001c0001t0057	a0001c0001t0013g0149 a0001c0001t0033g0003 a0001c0001t0057g0098 a0001c0001t0013g0149 a0001c0001t0033g0003 a0001c0001t0057g0098	3	242	0.0124	-14	c.147 others(33): Show c.147+58381_147+58394delCTTTCTTTCTTTCT	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83488972	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG02165.hp2 HG01952.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0003 a0001c0001t0006 a0001c0002t0003	a0001c0001t0006g0076 a0001c0002t0003g0069 a0001c0001t0006g0076 a0001c0002t0003g0069	2	242	0.0083	-14	c.147 others(33): Show c.147+49099_147+49112delCACACACACACACA	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83490786	TCTCTCTC others(7): Show TCTCTCTCTCTCTCA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG02257.hp1 HG02486.hp1 others(1): Show HG00140.hp1 HG02257.hp1 HG02486.hp1 NA20129.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0005 a0004c0007 a0001c0001 a0001c0005 a0004c0007	a0001c0001t0006 a0001c0001t0051 a0001c0005t0008 others(1): Show a0001c0001t0006 a0001c0001t0051 a0001c0005t0008 a0004c0007t0021	a0001c0001t0006g0007 a0001c0001t0051g0012 a0001c0005t0008g0008 others(1): Show a0001c0001t0006g0007 a0001c0001t0051g0012 a0001c0005t0008g0008 a0004c0007t0021g0013	4	242	0.0165	-14	c.147 others(33): Show c.147+47285_147+47298delTGAGAGAGAGAGAG	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83490788	TCTCTCTC others(7): Show TCTCTCTCTCTCACA	T T	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02896.hp2 HG02647.hp1 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0002t0028 a0001c0001t0008 a0001c0002t0028	a0001c0001t0008g0021 a0001c0002t0028g0157 a0001c0001t0008g0021 a0001c0002t0028g0157	2	242	0.0083	-14	c.147 others(33): Show c.147+47283_147+47296delTGTGAGAGAGAGAG	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83507687	CATACATA others(7): Show CATACATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01884.hp1 HG02280.hp2 others(1): Show HG00099.hp1 HG01884.hp1 HG02280.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0043 a0001c0002t0003 a0001c0002t0007 others(1): Show a0001c0001t0043 a0001c0002t0003 a0001c0002t0007 a0001c0002t0049	a0001c0001t0043g0041 a0001c0002t0003g0010 a0001c0002t0007g0179 others(1): Show a0001c0001t0043g0041 a0001c0002t0003g0010 a0001c0002t0007g0179 a0001c0002t0049g0006	4	242	0.0165	-14	c.147 others(33): Show c.147+30384_147+30397delATATATATATGTAT	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83507691	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0004 a0001c0001t0036g0004	1	242	0.0041	-14	c.147 others(33): Show c.147+30380_147+30393delATATATATATATAT	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD4A_chr10_13638706_14335924	13706749	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	NA19065.hp1 NA19065.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0035 a0001c0001t0006g0035	1	134	0.0075	-14	c.836 others(29): Show c.836+274_836+287delGTGTGTGTGTGTGT	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	13/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13789558	CCACACAC others(7): Show CCACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02280.hp2 HG02922.hp1 HG01243.hp2 HG02280.hp2 HG02922.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0010 a0001c0001 a0003c0010	a0001c0001t0001 a0001c0001t0023 a0003c0010t0012 a0001c0001t0001 a0001c0001t0023 a0003c0010t0012	a0001c0001t0001g0062 a0001c0001t0023g0075 a0003c0010t0012g0001 a0001c0001t0001g0062 a0001c0001t0023g0075 a0003c0010t0012g0001	3	134	0.0224	-14	c.300 others(31): Show c.300-6566_300-6553delTGTGTGTGTGTGTG	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	5/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13814352	AGGCTGAG others(7): Show AGGCTGAGGCAGGAG	A A	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0021 a0001c0001t0003g0021	1	134	0.0075	-14	c.112 others(31): Show c.112-3458_112-3445delCTCCTGCCTCAGCC	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	3/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13814594	AAAAAAAA others(7): Show AAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0048 a0001c0002t0007g0048	1	134	0.0075	-14	c.112 others(31): Show c.112-3700_112-3687delCTTTTTTTTTTTTT	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	3/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13856217	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00738.hp2 HG01074.hp1 others(27): Show HG00099.hp1 HG00738.hp2 HG01074.hp1 HG01123.hp1 HG01123.hp2 HG01256.hp1 HG01258.hp2 HG01358.hp1 HG01361.hp1 HG01891.hp2 HG01975.hp1 HG02109.hp1 HG02109.hp2 HG02273.hp1 HG02630.hp1 HG02738.hp1 HG02809.hp2 HG02965.hp1 HG02976.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03486.hp2 HG03540.hp2 HG04184.hp1 HG04184.hp2 NA18906.hp2 NA19065.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0019 a0001c0001t0029 a0001c0003t0001	a0001c0001t0001g0005 a0001c0001t0001g0013 a0001c0001t0001g0029 others(27): Show a0001c0001t0001g0005 a0001c0001t0001g0013 a0001c0001t0001g0029 a0001c0001t0001g0096 a0001c0001t0001g0129 a0001c0001t0002g0020 a0001c0001t0002g0039 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0072 a0001c0001t0002g0128 a0001c0001t0003g0021 a0001c0001t0003g0122 a0001c0001t0003g0127 a0001c0001t0004g0052 a0001c0001t0004g0070 a0001c0001t0005g0124 a0001c0001t0007g0094 a0001c0001t0008g0036 a0001c0001t0008g0102 a0001c0001t0011g0018 a0001c0001t0011g0090 a0001c0001t0012g0069 a0001c0001t0015g0037 a0001c0001t0016g0002 a0001c0001t0019g0064 a0001c0001t0029g0133 a0001c0003t0001g0010 a0001c0003t0001g0071 a0001c0003t0001g0105	30	134	0.2239	-14	c.111 others(31): Show c.111+2616_111+2629delACACACACACACAC	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	3/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13857493	TTTTCCTA others(7): Show TTTTCCTATTTTCTG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG01069.hp1 others(24): Show HG00140.hp1 HG00140.hp2 HG01069.hp1 HG01071.hp1 HG01256.hp2 HG01258.hp1 HG01975.hp2 HG01981.hp2 HG02132.hp2 HG02148.hp1 HG02258.hp2 HG02280.hp2 HG02523.hp1 HG02723.hp2 HG02965.hp2 HG02970.hp1 HG03130.hp2 HG03471.hp2 HG03579.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA19009.hp1 NA19009.hp2 NA19065.hp1 NA19074.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0008 a0001c0011 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 a0001c0001t0020 a0001c0002t0007 a0001c0003t0003 a0001c0005t0003 a0001c0008t0001 a0001c0011t0002 a0002c0004t0002	a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0081 others(24): Show a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0081 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0002g0121 a0001c0001t0004g0014 a0001c0001t0004g0016 a0001c0001t0004g0025 a0001c0001t0004g0046 a0001c0001t0004g0130 a0001c0001t0005g0109 a0001c0001t0006g0035 a0001c0001t0006g0044 a0001c0001t0007g0015 a0001c0001t0007g0107 a0001c0001t0008g0022 a0001c0001t0008g0077 a0001c0001t0009g0099 a0001c0001t0013g0040 a0001c0001t0020g0026 a0001c0002t0007g0126 a0001c0003t0003g0080 a0001c0005t0003g0003 a0001c0008t0001g0061 a0001c0011t0002g0101 a0002c0004t0002g0095	27	134	0.2015	-14	c.111 others(31): Show c.111+1340_111+1353delCAGAAAATAGGAAA	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	3/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13881988	AGGGTGTG others(7): Show AGGGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0121 a0001c0001t0002g0121	1	134	0.0075	-14	c.46- others(31): Show c.46-23090_46-23077delACACACACACACCC	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	2/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13884168	TCACACAC others(7): Show TCACACACTCACACA	T T	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02809.hp1 HG02922.hp2 others(4): Show HG02572.hp2 HG02809.hp1 HG02922.hp2 HG03540.hp2 NA18522.hp2 NA19043.hp2 NA20300.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0004c0007	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0002t0024 a0002c0004t0010 a0004c0007t0003	a0001c0001t0002g0072 a0001c0001t0002g0100 a0001c0001t0003g0019 others(4): Show a0001c0001t0002g0072 a0001c0001t0002g0100 a0001c0001t0003g0019 a0001c0001t0006g0125 a0001c0002t0024g0057 a0002c0004t0010g0053 a0004c0007t0003g0068	7	134	0.0522	-14	c.46- others(31): Show c.46-25270_46-25257delTGTGTGAGTGTGTG	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	2/24			chr10	TogoVar

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