Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GABRB1_chr4_47026567_47431447	47184150	CATTTCTG others(7): Show CATTTCTGGACATCA	C C	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0034 a0001c0002t0001g0034	1	158	0.0063	-14	c.461 others(33): Show c.461+22682_461+22695delATTTCTGGACATCA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	4/8			chr4	TogoVar
GABRB1_chr4_47026567_47431447	47246337	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG04199.hp1 NA20905.hp2 HG00280.hp2 HG04199.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0009 a0001c0002t0002 a0001c0003t0011 a0001c0001t0009 a0001c0002t0002 a0001c0003t0011	a0001c0001t0009g0053 a0001c0002t0002g0109 a0001c0003t0011g0052 a0001c0001t0009g0053 a0001c0002t0002g0109 a0001c0003t0011g0052	3	158	0.0190	-14	c.462 others(33): Show c.462-73744_462-73731delTATATATATATATA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47333190	TTATTTAT others(7): Show TTATTTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0071 a0001c0002t0003g0071	1	158	0.0063	-14	c.544 others(33): Show c.544+12985_544+12998delTTATATATATATAT	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47333223	TATATATA others(7): Show TATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01099.hp2 HG01261.hp1 others(13): Show HG00438.hp1 HG01099.hp2 HG01261.hp1 HG02071.hp1 HG02145.hp1 HG02258.hp1 HG02280.hp1 HG03041.hp2 HG03130.hp1 NA18947.hp1 NA18947.hp2 NA18953.hp1 NA18953.hp2 NA18974.hp1 NA18984.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0002t0002 a0001c0002t0007 a0001c0003t0005 a0001c0003t0006 a0001c0003t0010 a0001c0004t0010 a0001c0009t0001	a0001c0001t0001g0047 a0001c0001t0001g0075 a0001c0001t0001g0076 others(13): Show a0001c0001t0001g0047 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0001g0156 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0004g0082 a0001c0001t0007g0013 a0001c0002t0002g0018 a0001c0002t0007g0099 a0001c0003t0005g0033 a0001c0003t0006g0128 a0001c0003t0010g0070 a0001c0004t0010g0020 a0001c0009t0001g0124	16	158	0.1013	-14	c.544 others(33): Show c.544+13016_544+13029delTATATATATATACA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47350183	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	158	0.0063	-14	c.544 others(33): Show c.544+29997_544+30010delTATATATATATATA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47404489	GCACACAC others(7): Show GCACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01255.hp1 HG01256.hp2 others(33): Show HG00438.hp2 HG01255.hp1 HG01256.hp2 HG02027.hp2 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02165.hp2 HG02451.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02818.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp2 NA18522.hp1 NA18906.hp1 NA18946.hp1 NA18951.hp2 NA18965.hp2 NA18974.hp2 NA18994.hp2 NA19030.hp1 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0006 a0001c0002 a0001c0005 a0001c0006	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(7): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0008 a0001c0005t0003 a0001c0006t0005 a0001c0006t0006	a0001c0002t0001g0003 a0001c0002t0001g0034 a0001c0002t0001g0036 others(33): Show a0001c0002t0001g0003 a0001c0002t0001g0034 a0001c0002t0001g0036 a0001c0002t0001g0089 a0001c0002t0001g0101 a0001c0002t0001g0118 a0001c0002t0001g0140 a0001c0002t0002g0018 a0001c0002t0002g0023 a0001c0002t0002g0093 a0001c0002t0002g0109 a0001c0002t0003g0016 a0001c0002t0003g0019 a0001c0002t0003g0021 a0001c0002t0003g0022 a0001c0002t0003g0071 a0001c0002t0004g0055 a0001c0002t0004g0083 a0001c0002t0004g0104 a0001c0002t0004g0105 a0001c0002t0004g0112 a0001c0002t0004g0113 a0001c0002t0004g0125 a0001c0002t0005g0039 a0001c0002t0007g0064 a0001c0002t0008g0010 a0001c0005t0003g0009 a0001c0005t0003g0012 a0001c0005t0003g0054 a0001c0005t0003g0130 a0001c0005t0003g0137 a0001c0005t0003g0144 a0001c0006t0005g0100 a0001c0006t0006g0041 a0001c0006t0006g0126 a0001c0006t0006g0129	36	158	0.2279	-14	c.835 others(29): Show c.835+805_835+818delCACACACACACACA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB2_chr5_161283436_161551725	161308045	TAGAGATG others(7): Show TAGAGATGGGGTTTC	T T	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01517.hp2 HG01516.hp1 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0262 a0001c0001t0017g0264 a0001c0001t0017g0262 a0001c0001t0017g0264	2	266	0.0075	-14	c.119 others(35): Show c.1192-13631_1192-13618delGAAACCCCATCTCT	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	9/9			chr5	TogoVar
GABRB2_chr5_161283436_161551725	161385945	CTGGTGTG others(7): Show CTGGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01109.hp1 HG02451.hp1 others(7): Show HG01074.hp1 HG01109.hp1 HG02451.hp1 HG02451.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02970.hp1 HG03041.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 others(3): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0020 a0001c0002t0036 a0001c0002t0037	a0001c0001t0006g0007 a0001c0001t0008g0021 a0001c0001t0008g0126 others(7): Show a0001c0001t0006g0007 a0001c0001t0008g0021 a0001c0001t0008g0126 a0001c0001t0008g0157 a0001c0001t0008g0253 a0001c0001t0010g0090 a0001c0001t0010g0146 a0001c0001t0020g0155 a0001c0002t0036g0008 a0001c0002t0037g0222	10	266	0.0376	-14	c.541 others(33): Show c.541+25016_541+25029delACACACACACACCA	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	5/9			chr5	TogoVar
GABRB2_chr5_161283436_161551725	161385947	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01496.hp2 HG02486.hp2 others(1): Show HG01069.hp2 HG01496.hp2 HG02486.hp2 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0011 a0001c0002t0012 a0001c0001t0004 a0001c0002t0011 a0001c0002t0012	a0001c0001t0004g0052 a0001c0002t0011g0247 a0001c0002t0012g0078 others(1): Show a0001c0001t0004g0052 a0001c0002t0011g0247 a0001c0002t0012g0078 a0001c0002t0012g0246	4	266	0.0150	-14	c.541 others(33): Show c.541+25014_541+25027delACACACACACACAC	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	5/9			chr5	TogoVar
GABRB2_chr5_161283436_161551725	161393299	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp2 HG01169.hp1 others(10): Show HG00140.hp1 HG00738.hp2 HG01169.hp1 HG01255.hp1 HG01891.hp1 HG02486.hp2 HG02735.hp2 HG03704.hp1 NA18953.hp1 NA19005.hp2 NA19064.hp2 NA19081.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0047 a0001c0002t0011 a0001c0002t0012 a0001c0003t0020 a0001c0003t0021	a0001c0001t0001g0019 a0001c0001t0001g0131 a0001c0001t0003g0017 others(10): Show a0001c0001t0001g0019 a0001c0001t0001g0131 a0001c0001t0003g0017 a0001c0001t0003g0199 a0001c0001t0006g0016 a0001c0001t0006g0123 a0001c0001t0006g0170 a0001c0001t0006g0174 a0001c0001t0047g0175 a0001c0002t0011g0247 a0001c0002t0012g0130 a0001c0003t0020g0151 a0001c0003t0021g0149	13	266	0.0489	-14	c.541 others(33): Show c.541+17662_541+17675delTTTTTTTTTTTTTT	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	5/9			chr5	TogoVar
GABRB2_chr5_161283436_161551725	161436502	CAGCCTGG others(7): Show CAGCCTGGGTGACAG	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00423.hp2 HG00438.hp2 others(57): Show HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00735.hp1 HG01069.hp2 HG01074.hp1 HG01168.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG01358.hp1 HG01496.hp1 HG01496.hp2 HG01891.hp2 HG01928.hp1 HG01943.hp2 HG01975.hp2 HG02004.hp2 HG02074.hp1 HG02145.hp1 HG02165.hp1 HG02293.hp1 HG02300.hp1 HG02451.hp1 HG02486.hp2 HG02523.hp1 HG02630.hp2 HG02735.hp1 HG02809.hp2 HG02970.hp1 HG03041.hp2 HG03098.hp2 HG03486.hp1 HG03492.hp2 HG04228.hp1 NA18940.hp1 NA18942.hp2 NA18949.hp1 NA18952.hp2 NA18954.hp1 NA18960.hp1 NA18962.hp1 NA18970.hp1 NA18983.hp1 NA18984.hp2 NA18993.hp1 NA18994.hp2 NA18995.hp1 NA18999.hp2 NA19005.hp1 NA19012.hp2 NA19057.hp2 NA19062.hp1 NA19068.hp1 NA19074.hp1 NA19081.hp1 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0010 a0001c0001t0015 a0001c0001t0016 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0024 a0001c0001t0029 a0001c0001t0052 a0001c0001t0055 a0001c0002t0011 a0001c0002t0012 a0001c0002t0025	a0001c0001t0001g0260 a0001c0001t0002g0135 a0001c0001t0002g0159 others(57): Show a0001c0001t0001g0260 a0001c0001t0002g0135 a0001c0001t0002g0159 a0001c0001t0003g0017 a0001c0001t0003g0056 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0076 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0084 a0001c0001t0003g0111 a0001c0001t0003g0160 a0001c0001t0004g0052 a0001c0001t0004g0053 a0001c0001t0004g0059 a0001c0001t0004g0061 a0001c0001t0004g0062 a0001c0001t0004g0063 a0001c0001t0004g0064 a0001c0001t0004g0065 a0001c0001t0004g0068 a0001c0001t0005g0039 a0001c0001t0005g0040 a0001c0001t0005g0041 a0001c0001t0005g0058 a0001c0001t0005g0098 a0001c0001t0005g0167 a0001c0001t0005g0172 a0001c0001t0005g0196 a0001c0001t0005g0197 a0001c0001t0005g0213 a0001c0001t0005g0251 a0001c0001t0008g0021 a0001c0001t0008g0157 a0001c0001t0008g0253 a0001c0001t0010g0185 a0001c0001t0015g0184 a0001c0001t0015g0245 a0001c0001t0016g0060 a0001c0001t0016g0075 a0001c0001t0019g0051 a0001c0001t0019g0066 a0001c0001t0019g0083 a0001c0001t0020g0155 a0001c0001t0022g0046 a0001c0001t0022g0079 a0001c0001t0024g0050 a0001c0001t0029g0085 a0001c0001t0052g0057 a0001c0001t0055g0067 a0001c0002t0011g0247 a0001c0002t0012g0078 a0001c0002t0012g0246 a0001c0002t0012g0248 a0001c0002t0025g0136 a0001c0002t0025g0137	60	266	0.2256	-14	c.458 others(33): Show c.458+23108_458+23121delCTGTCACCCAGGCT	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	4/9			chr5	TogoVar
GABRB2_chr5_161283436_161551725	161463549	TTTTATTT others(7): Show TTTTATTTATATATA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00642.hp1 HG00735.hp2 others(3): Show HG00140.hp2 HG00642.hp1 HG00735.hp2 HG01109.hp2 HG01928.hp2 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0204 others(3): Show a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207	6	266	0.0226	-14	c.238 others(31): Show c.238-3719_238-3706delTATATATAAATAAA	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	3/9			chr5	TogoVar
GABRB3_chr15_26538552_26778066	26609089	CACACACA others(7): Show CACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03579.hp1 NA20300.hp1 HG03209.hp2 HG03579.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0032 a0001c0003t0020 a0001c0005t0016 a0001c0001t0032 a0001c0003t0020 a0001c0005t0016	a0001c0001t0032g0022 a0001c0003t0020g0003 a0001c0005t0016g0193 a0001c0001t0032g0022 a0001c0003t0020g0003 a0001c0005t0016g0193	3	204	0.0147	-14	c.461 others(33): Show c.461+12211_461+12224delATGTGTGTGTGTGT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	4/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26617404	AGAAAAAA others(7): Show AGAAAAAAACCACAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0204 a0001c0001t0036g0204	1	204	0.0049	-14	c.461 others(31): Show c.461+3896_461+3909delATGTGGTTTTTTTC	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	4/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26741042	ATAAGTGT others(7): Show ATAAGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01243.hp2 HG02109.hp2 others(8): Show HG01071.hp2 HG01243.hp2 HG02109.hp2 HG02155.hp2 HG02280.hp1 HG03492.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp1 HG04204.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0026 a0001c0001t0031	a0001c0001t0001g0065 a0001c0001t0001g0162 a0001c0001t0001g0164 others(8): Show a0001c0001t0001g0065 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0187 a0001c0001t0002g0069 a0001c0001t0004g0047 a0001c0001t0004g0163 a0001c0001t0004g0165 a0001c0001t0009g0172 a0001c0001t0026g0071 a0001c0001t0031g0042	11	204	0.0539	-14	c.240 others(33): Show c.240+31346_240+31359delCACACACACACTTA	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26747952	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0012 a0001c0001t0003g0012	1	204	0.0049	-14	c.240 others(33): Show c.240+24436_240+24449delAAAAAAAAAAAAAA	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764177	AAAATATA others(7): Show AAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0045 a0001c0001t0005g0045	1	204	0.0049	-14	c.240 others(31): Show c.240+8211_240+8224delATATATATATATTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRE_chrX_151948124_151979676	151971853	GTGTGTGT others(7): Show GTGTGTGTGTGTGTC	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00741.hp2 HG01074.hp1 others(22): Show HG00639.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01256.hp1 HG01433.hp1 HG01516.hp1 HG01517.hp2 HG01981.hp2 HG02273.hp2 HG03540.hp2 HG03669.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 NA18975.hp2 NA18979.hp2 NA19062.hp1 NA19063.hp1 NA19083.hp1 NA19091.hp1 NA20300.hp1 NA20905.hp1 NA21309.hp2	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0001c0002 a0002c0003 others(2): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004 a0010c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0002t0001 a0002c0003t0001 a0002c0004t0003 a0010c0011t0001	a0001c0001t0001g0031 a0001c0001t0001g0109 a0001c0001t0001g0203 others(21): Show a0001c0001t0001g0031 a0001c0001t0001g0109 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0002g0054 a0001c0001t0002g0059 a0001c0001t0002g0215 a0001c0001t0002g0279 a0001c0001t0004g0208 a0001c0001t0004g0228 a0001c0002t0001g0191 a0002c0003t0001g0099 a0002c0003t0001g0116 a0002c0003t0001g0120 a0002c0003t0001g0128 a0002c0003t0001g0132 a0002c0003t0001g0140 a0002c0003t0001g0141 a0002c0003t0001g0172 a0002c0003t0001g0173 a0002c0004t0003g0043 a0010c0011t0001g0207	25	326	0.0767	-14	c.57- others(29): Show c.57-1465_57-1452delGACACACACACACA	GABRE	ENSG00000102287.19	transcript	ENST00000370328.4	protein_coding	1/8			chrX	TogoVar
GABRE_chrX_151948124_151979676	151971867	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0133 a0002c0003t0001g0133	1	326	0.0031	-14	c.57- others(29): Show c.57-1479_57-1466delCACACACACACACA	GABRE	ENSG00000102287.19	transcript	ENST00000370328.4	protein_coding	1/8			chrX	TogoVar
GABRG1_chr4_46030769_46129054	46056146	TAAATTAA others(7): Show TAAATTAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	308	0.0033	-14	c.916 others(31): Show c.916+2057_916+2070delTTTTTTTTTAATTT	GABRG1	ENSG00000163285.8	transcript	ENST00000295452.5	protein_coding	7/8			chr4	TogoVar
GABRG1_chr4_46030769_46129054	46056150	TTAAAAAA others(7): Show TTAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02809.hp1 HG02976.hp1 others(2): Show HG02486.hp1 HG02809.hp1 HG02976.hp1 HG03453.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0295 others(2): Show a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297	5	308	0.0162	-14	c.916 others(31): Show c.916+2053_916+2066delTTTTTTTTTTTTTA	GABRG1	ENSG00000163285.8	transcript	ENST00000295452.5	protein_coding	7/8			chr4	TogoVar
GABRG3_chr15_26966181_27546984	27261887	CTGTTATT others(7): Show CTGTTATTTTCCCTG	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02258.hp1 HG03453.hp1 others(6): Show HG02145.hp2 HG02258.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG06807.hp1 NA19030.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(5): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0001c0011 a0001c0014	a0001c0001t0001 a0001c0003t0032 a0001c0004t0011 others(5): Show a0001c0001t0001 a0001c0003t0032 a0001c0004t0011 a0001c0005t0005 a0001c0007t0004 a0001c0009t0010 a0001c0011t0018 a0001c0014t0024	a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0003t0032g0040 others(6): Show a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0003t0032g0040 a0001c0004t0011g0078 a0001c0005t0005g0037 a0001c0007t0004g0056 a0001c0009t0010g0051 a0001c0011t0018g0004 a0001c0014t0024g0057	9	92	0.0978	-14	c.271 others(33): Show c.271-64920_271-64907delGTTATTTTCCCTGT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27285254	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0084	1	92	0.0109	-14	c.271 others(33): Show c.271-41520_271-41507delGTGTGTGTGTGTGT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27313254	GTGTGTGT others(7): Show GTGTGTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01891.hp1 HG01099.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0016 a0001c0001 a0001c0016	a0001c0001t0028 a0001c0016t0001 a0001c0001t0028 a0001c0016t0001	a0001c0001t0028g0054 a0001c0016t0001g0074 a0001c0001t0028g0054 a0001c0016t0001g0074	2	92	0.0217	-14	c.271 others(33): Show c.271-13553_271-13540delGTGTGTGTATATAT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27313256	GTGTGTGT others(7): Show GTGTGTGTATATATA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0062 a0001c0002t0006g0062	1	92	0.0109	-14	c.271 others(33): Show c.271-13551_271-13538delGTGTGTATATATAT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27365298	GACACAGA others(7): Show GACACAGACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02572.hp1 HG02717.hp1 others(1): Show HG01891.hp1 HG02572.hp1 HG02717.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0010	a0001c0001t0028 a0001c0003t0022 a0001c0004t0011 others(1): Show a0001c0001t0028 a0001c0003t0022 a0001c0004t0011 a0001c0010t0017	a0001c0001t0028g0054 a0001c0003t0022g0058 a0001c0004t0011g0060 others(1): Show a0001c0001t0028g0054 a0001c0003t0022g0058 a0001c0004t0011g0060 a0001c0010t0017g0003	4	92	0.0435	-14	c.574 others(33): Show c.574+36416_574+36429delGACACACACACACA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRP_chr5_170778725_170819047	170803500	ATATACGA others(7): Show ATATACGATAAAATT	A A	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0150 a0001c0003t0002g0150	1	362	0.0028	-14	c.542 others(31): Show c.542-2215_542-2202delTATACGATAAAATT	GABRP	ENSG00000094755.17	transcript	ENST00000265294.9	protein_coding	6/9			chr5	TogoVar
GABRP_chr5_170778725_170819047	170804987	TTATATTA others(7): Show TTATATTATATATTA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00544.hp1 others(52): Show HG00099.hp2 HG00140.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp2 HG01168.hp1 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01928.hp2 HG01952.hp1 HG01981.hp1 HG02056.hp2 HG02080.hp1 HG02083.hp2 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02523.hp1 HG02615.hp1 HG02698.hp2 HG02809.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02922.hp2 HG03098.hp1 HG03486.hp1 HG03491.hp2 HG03579.hp2 HG03654.hp2 HG03710.hp1 HG04115.hp2 HG04228.hp1 NA18940.hp2 NA18970.hp2 NA18972.hp2 NA18982.hp1 NA18988.hp2 NA18989.hp2 NA19012.hp1 NA19065.hp1 NA19083.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20805.hp2	a0001 a0004 a0011 a0001 a0004 a0011	a0001c0001 a0001c0003 a0004c0006 others(1): Show a0001c0001 a0001c0003 a0004c0006 a0011c0012	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(8): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0022 a0001c0001t0030 a0001c0003t0001 a0001c0003t0002 a0004c0006t0001 a0004c0006t0002 a0011c0012t0002	a0001c0001t0001g0008 a0001c0001t0001g0043 a0001c0001t0001g0095 others(32): Show a0001c0001t0001g0008 a0001c0001t0001g0043 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0200 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0006g0078 a0001c0001t0006g0079 a0001c0001t0006g0100 a0001c0001t0006g0209 a0001c0001t0007g0169 a0001c0001t0007g0203 a0001c0001t0009g0008 a0001c0001t0022g0168 a0001c0001t0022g0173 a0001c0001t0030g0008 a0001c0003t0001g0003 a0001c0003t0002g0003 a0001c0003t0002g0039 a0001c0003t0002g0040 a0001c0003t0002g0041 a0001c0003t0002g0142 a0001c0003t0002g0148 a0001c0003t0002g0149 a0001c0003t0002g0150 a0001c0003t0002g0153 a0004c0006t0001g0003 a0004c0006t0002g0003 a0004c0006t0002g0152 a0011c0012t0002g0151	55	362	0.1519	-14	c.542 others(29): Show c.542-723_542-710delTATATATTATATAT	GABRP	ENSG00000094755.17	transcript	ENST00000265294.9	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr5	TogoVar
GABRR2_chr6_89249464_89320299	89267043	AGGCTGGA others(7): Show AGGCTGGAGTGCAGT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02886.hp2 HG01884.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0133 a0001c0001t0006g0330 a0001c0001t0001g0133 a0001c0001t0006g0330	2	366	0.0055	-14	c.736 others(29): Show c.736+622_736+635delACTGCACTCCAGCC	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	6/8			chr6	TogoVar
GABRR2_chr6_89249464_89320299	89280211	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01884.hp2 HG02451.hp2 others(7): Show HG00609.hp2 HG01884.hp2 HG02451.hp2 HG02559.hp1 HG02723.hp1 HG02895.hp1 HG02897.hp2 HG02970.hp2 HG03195.hp2 HG03225.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0003 a0001c0001 a0001c0005 a0002c0003	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0005t0002 a0002c0003t0002	a0001c0001t0002g0013 a0001c0001t0002g0289 a0001c0001t0002g0311 others(7): Show a0001c0001t0002g0013 a0001c0001t0002g0289 a0001c0001t0002g0311 a0001c0001t0003g0153 a0001c0001t0008g0217 a0001c0001t0009g0030 a0001c0001t0009g0031 a0001c0005t0002g0189 a0001c0005t0002g0190 a0002c0003t0002g0353	10	366	0.0273	-14	c.221 others(31): Show c.221-8503_221-8490delATATATATATATAT	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	2/8			chr6	TogoVar
GABRR3_chr3_97980102_98040315	97982714	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp1 HG02622.hp1 HG02647.hp2 HG00735.hp1 HG02622.hp1 HG02647.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0007 a0002c0002t0007 a0001c0001t0001 a0001c0001t0007 a0002c0002t0007	a0001c0001t0001g0356 a0001c0001t0007g0180 a0002c0002t0007g0035 a0001c0001t0001g0356 a0001c0001t0007g0180 a0002c0002t0007g0035	3	382	0.0079	-14	c.39 others(25): Show c.3955_*3968delACACACACACACAC	GABRR3	ENSG00000183185.10	transcript	ENST00000472788.6	protein_coding		2387		chr3	TogoVar
GAD1_chr2_170811887_170866151	170824378	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01069.hp2 HG01975.hp1 others(9): Show HG00741.hp1 HG01069.hp2 HG01975.hp1 HG02109.hp1 HG02559.hp2 HG02735.hp1 HG02970.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 NA18906.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0063 a0001c0001t0001g0172 a0001c0001t0001g0211 others(9): Show a0001c0001t0001g0063 a0001c0001t0001g0172 a0001c0001t0001g0211 a0001c0001t0001g0221 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0238 a0001c0001t0001g0266 a0001c0001t0001g0315 a0001c0001t0002g0212 a0001c0001t0002g0342 a0001c0002t0001g0136	12	412	0.0291	-14	c.145 others(31): Show c.145+2258_145+2271delACACACACACACAC	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD1_chr2_170811887_170866151	170828222	CTCCTCTT others(7): Show CTCCTCTTTCTGCTG	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG00423.hp2 others(60): Show HG00323.hp2 HG00408.hp1 HG00423.hp2 HG00673.hp1 HG00741.hp1 HG01099.hp2 HG01168.hp2 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02155.hp1 HG02165.hp2 HG02523.hp1 HG02559.hp2 HG02683.hp1 HG03471.hp2 HG03491.hp2 HG03492.hp1 HG03654.hp2 HG03669.hp2 HG03831.hp1 HG03942.hp2 HG04228.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18955.hp1 NA18959.hp1 NA18959.hp2 NA18966.hp1 NA18969.hp1 NA18970.hp1 NA18975.hp2 NA18981.hp2 NA18982.hp2 NA18987.hp2 NA18988.hp1 NA18994.hp1 NA18995.hp2 NA18999.hp1 NA19009.hp2 NA19010.hp2 NA19054.hp1 NA19056.hp2 NA19068.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19080.hp1 NA19082.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19090.hp2 NA20905.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0007 others(1): Show a0001c0001 a0001c0002 a0001c0007 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0007t0002 a0003c0006t0002	a0001c0001t0001g0178 a0001c0001t0002g0024 a0001c0001t0002g0040 others(58): Show a0001c0001t0001g0178 a0001c0001t0002g0024 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0074 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0079 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0096 a0001c0001t0002g0120 a0001c0001t0002g0125 a0001c0001t0002g0128 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0212 a0001c0001t0002g0224 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0265 a0001c0001t0002g0339 a0001c0001t0002g0340 a0001c0001t0002g0341 a0001c0001t0002g0342 a0001c0002t0001g0170 a0001c0002t0001g0201 a0001c0002t0001g0210 a0001c0002t0001g0230 a0001c0002t0002g0008 a0001c0002t0002g0009 a0001c0002t0002g0032 a0001c0002t0002g0067 a0001c0002t0002g0068 a0001c0002t0002g0098 a0001c0002t0002g0110 a0001c0002t0002g0203 a0001c0002t0002g0270 a0001c0002t0002g0271 a0001c0002t0002g0272 a0001c0007t0002g0158 a0001c0007t0002g0202 a0003c0006t0002g0078 a0003c0006t0002g0082 a0003c0006t0002g0083 a0003c0006t0002g0124 a0003c0006t0002g0177	63	412	0.1529	-14	c.146 others(31): Show c.146-1247_146-1234delTTTCTGCTGTCCTC	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD2_chr10_26211774_26309558	26237998	TCACACAG others(7): Show TCACACAGACACACA	T T	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02965.hp1 HG03139.hp2 others(4): Show HG02818.hp1 HG02965.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03486.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0011 a0001c0001t0019 others(3): Show a0001c0001t0008 a0001c0001t0011 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0028	a0001c0001t0008g0270 a0001c0001t0008g0272 a0001c0001t0011g0110 others(4): Show a0001c0001t0008g0270 a0001c0001t0008g0272 a0001c0001t0011g0110 a0001c0001t0019g0107 a0001c0001t0020g0283 a0001c0001t0023g0251 a0001c0001t0028g0280	7	294	0.0238	-14	c.841 others(31): Show c.841-7916_841-7903delGACACACACACACA	GAD2	ENSG00000136750.13	transcript	ENST00000376261.8	protein_coding	7/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GADL1_chr3_30721197_30899661	30800806	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02056.hp2 HG02074.hp1 others(16): Show HG00673.hp2 HG02056.hp2 HG02074.hp1 HG02922.hp1 HG02965.hp2 HG03834.hp2 HG04115.hp1 NA18522.hp1 NA18747.hp1 NA18951.hp1 NA18954.hp2 NA18981.hp2 NA18986.hp2 NA18993.hp1 NA18994.hp1 NA19030.hp1 NA19066.hp2 NA19077.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0028 a0001c0001t0035	a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0251 others(16): Show a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0251 a0001c0001t0002g0193 a0001c0001t0002g0195 a0001c0001t0002g0219 a0001c0001t0002g0256 a0001c0001t0003g0063 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0003g0241 a0001c0001t0003g0262 a0001c0001t0003g0275 a0001c0001t0004g0064 a0001c0001t0005g0197 a0001c0001t0007g0077 a0001c0001t0007g0102 a0001c0001t0028g0175 a0001c0001t0035g0141	19	282	0.0674	-14	c.125 others(29): Show c.1250+69_1250+82delGTGTGTGTGTGTGT	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	12/14			chr3	TogoVar
GADL1_chr3_30721197_30899661	30800840	CACACACA others(7): Show CACACACACACAGAA	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0183 a0001c0001t0005g0183	1	282	0.0036	-14	c.125 others(29): Show c.1250+35_1250+48delTTCTGTGTGTGTGT	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	12/14			chr3	TogoVar
GADL1_chr3_30721197_30899661	30816530	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG03491.hp2 NA18984.hp2 others(1): Show HG02602.hp1 HG03491.hp2 NA18984.hp2 NA19002.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0008c0011 a0001c0001 a0008c0011	a0001c0001t0001 a0001c0001t0036 a0008c0011t0003 a0001c0001t0001 a0001c0001t0036 a0008c0011t0003	a0001c0001t0001g0043 a0001c0001t0001g0155 a0001c0001t0036g0100 others(1): Show a0001c0001t0001g0043 a0001c0001t0001g0155 a0001c0001t0036g0100 a0008c0011t0003g0269	4	282	0.0142	-14	c.105 others(35): Show c.1051-15456_1051-15443delAAAAAAAAAAAAAA	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	11/14			chr3	TogoVar
GAGE10_chrX_49298646_49324841	49300477	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03669.hp2 HG03834.hp1 NA20905.hp1 HG03669.hp2 HG03834.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0042 a0001c0001t0001g0019 a0001c0001t0001g0042	3	302	0.0099	-14	c.-32 others(25): Show c.-3284_-3271delTTTTTTTTTTTTTT	GAGE10	ENSG00000215274.6	transcript	ENST00000407599.4	protein_coding		3168		chrX	TogoVar
GAGE12D_chrX_49536733_49554094	49553167	TGTGTGTG others(7): Show TGTGTGTGTGTGCAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0001 a0002c0002t0003g0001	1	72	0.0139	-14	c.41 others(25): Show c.4165_*4178delGTGTGTGTGTGCAC	GAGE12D	ENSG00000227488.3	transcript	ENST00000405679.4	protein_coding		4074		chrX	TogoVar
GAGE12G_chrX_49565400_49582754	49581827	TGTGTGTG others(7): Show TGTGTGTGTGTGCAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp2 NA18956.hp1 HG00423.hp2 NA18956.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0012 a0002c0002t0001g0013 a0002c0002t0001g0012 a0002c0002t0001g0013	2	95	0.0211	-14	c.41 others(25): Show c.4165_*4178delGTGTGTGTGTGCAC	GAGE12G	ENSG00000215269.6	transcript	ENST00000445148.2	protein_coding		4074		chrX	TogoVar
GAGE12H_chrX_49574949_49592301	49575368	GCTTACAG others(7): Show GCTTACAGGCATGCT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0018 a0001c0001t0008g0018	1	116	0.0086	-14	c.-46 others(25): Show c.-4696_-4683delCTTACAGGCATGCT	GAGE12H	ENSG00000224902.6	transcript	ENST00000381722.2	protein_coding		4580		chrX	TogoVar
GAGE12J_chrX_49317037_49334384	49333461	TGTGTGTG others(7): Show TGTGTGTGTGTGCAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 NA18942.hp1 NA18977.hp1 others(2): Show HG00408.hp2 NA18942.hp1 NA18977.hp1 NA18994.hp1 NA19058.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0002 a0005c0005t0002 a0001c0001t0002 a0005c0005t0002	a0001c0001t0002g0002 a0001c0001t0002g0048 a0005c0005t0002g0011 others(1): Show a0001c0001t0002g0002 a0001c0001t0002g0048 a0005c0005t0002g0011 a0005c0005t0002g0047	5	194	0.0258	-14	c.41 others(25): Show c.4169_*4182delGTGTGTGTGTGCAC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding		4078		chrX	TogoVar
GAGE13_chrX_49326582_49343949	49333461	TGTGTGTG others(7): Show TGTGTGTGTGTGCAC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG03927.hp1 NA18977.hp1 HG00408.hp1 HG03927.hp1 NA18977.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0004 a0003c0003t0003 a0003c0003t0004	a0003c0003t0003g0008 a0003c0003t0004g0033 a0003c0003t0003g0008 a0003c0003t0004g0033	3	93	0.0323	-14	c.205 others(27): Show c.205+66_205+79delCACGTGTGTGTGTG	GAGE13	ENSG00000274274.2	transcript	ENST00000612958.2	protein_coding	3/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAGE13_chrX_49326582_49343949	49335161	ATACGGAT others(7): Show ATACGGATATATGTT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01081.hp1 HG01167.hp1 others(26): Show HG00408.hp2 HG01081.hp1 HG01167.hp1 HG01256.hp1 HG01928.hp1 HG02080.hp1 HG02109.hp1 HG02258.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02809.hp2 HG02922.hp1 HG02922.hp2 HG03239.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 NA18948.hp1 NA18963.hp1 NA18998.hp2 NA19012.hp1 NA19062.hp1 NA20129.hp1	a0002 a0004 a0007 a0002 a0004 a0007	a0002c0002 a0004c0004 a0007c0007 a0002c0002 a0004c0004 a0007c0007	a0002c0002t0001 a0002c0002t0006 a0004c0004t0001 others(1): Show a0002c0002t0001 a0002c0002t0006 a0004c0004t0001 a0007c0007t0001	a0002c0002t0001g0002 a0002c0002t0001g0005 a0002c0002t0001g0012 others(18): Show a0002c0002t0001g0002 a0002c0002t0001g0005 a0002c0002t0001g0012 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0032 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0006g0011 a0004c0004t0001g0014 a0004c0004t0001g0019 a0004c0004t0001g0023 a0004c0004t0001g0024 a0004c0004t0001g0025 a0004c0004t0001g0053 a0004c0004t0001g0054 a0004c0004t0001g0059 a0007c0007t0001g0002	29	93	0.3118	-14	c.206 others(31): Show c.206-1082_206-1069delGGATATATGTTTAC	GAGE13	ENSG00000274274.2	transcript	ENST00000612958.2	protein_coding	3/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAL3ST1_chr22_30549635_30579665	30563120	ATAAATAA others(7): Show ATAAATAAATGGATT	A A	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0204 a0002c0002t0001g0204	1	452	0.0022	-14	c.-11 others(33): Show c.-119-4746_-119-4733delAATCCATTTATTTA	GAL3ST1	ENSG00000128242.13	transcript	ENST00000406361.6	protein_coding	1/3			chr22	TogoVar
GAL3ST2_chr2_241771822_241809287	241779214	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0084 a0002c0002t0002g0084	1	314	0.0032	-14	c.29+ others(29): Show c.29+2254_29+2267delTTTTTTTTTTTTTT	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAL3ST2_chr2_241771822_241809287	241808055	CCTCTTAG others(7): Show CCTCTTAGCCCAGGG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02040.hp2 HG02486.hp1 HG03130.hp1 others(2): Show HG02040.hp2 HG02486.hp1 HG03130.hp1 HG03195.hp1 NA18947.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0001c0001t0001 a0001c0001t0002 a0002c0002t0002	a0001c0001t0001g0070 a0001c0001t0002g0172 a0002c0002t0002g0004 others(2): Show a0001c0001t0001g0070 a0001c0001t0002g0172 a0002c0002t0002g0004 a0002c0002t0002g0023 a0002c0002t0002g0140	5	314	0.0159	-14	c.38 others(25): Show c.3890_*3903delCTCTTAGCCCAGGG	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding		3769		chr2	TogoVar
GALC_chr14_87928014_87998182	87962578	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00639.hp1 HG00642.hp2 others(4): Show HG00558.hp2 HG00639.hp1 HG00642.hp2 HG01069.hp1 HG01517.hp2 HG03490.hp1 HG03492.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0008 a0001c0001 a0002c0008	a0001c0001t0001 a0002c0008t0002 a0001c0001t0001 a0002c0008t0002	a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0240 others(4): Show a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0240 a0001c0001t0001g0245 a0001c0001t0001g0248 a0001c0001t0001g0249 a0002c0008t0002g0128	7	370	0.0189	-14	c.116 others(31): Show c.1161+792_1161+805delGTGTGTGTGTGTGT	GALC	ENSG00000054983.17	transcript	ENST00000261304.7	protein_coding	10/16			chr14	TogoVar
GALC_chr14_87928014_87998182	87997375	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00558.hp1 HG01943.hp1 others(1): Show HG00408.hp1 HG00558.hp1 HG01943.hp1 NA18994.hp2	a0001 a0002 a0014 a0001 a0002 a0014	a0001c0027 a0002c0002 a0014c0024 a0001c0027 a0002c0002 a0014c0024	a0001c0027t0001 a0002c0002t0002 a0014c0024t0002 a0001c0027t0001 a0002c0002t0002 a0014c0024t0002	a0001c0027t0001g0173 a0002c0002t0002g0168 a0002c0002t0002g0176 others(1): Show a0001c0027t0001g0173 a0002c0002t0002g0168 a0002c0002t0002g0176 a0014c0024t0002g0178	4	370	0.0108	-14	c.-42 others(25): Show c.-4225_-4212delAAAAAAAAAAAAAA	GALC	ENSG00000054983.17	transcript	ENST00000261304.7	protein_coding		4194		chr14	TogoVar
GALK2_chr15_49165247_49336882	49192485	GTATATAT others(7): Show GTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02886.hp2 NA19240.hp1 HG02451.hp2 HG02886.hp2 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0026 a0001c0002t0051 a0001c0002t0019 a0001c0002t0026 a0001c0002t0051	a0001c0002t0019g0132 a0001c0002t0026g0210 a0001c0002t0051g0169 a0001c0002t0019g0132 a0001c0002t0026g0210 a0001c0002t0051g0169	3	348	0.0086	-14	c.54- others(29): Show c.54-8650_54-8637delTATATATATATATA	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar

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