regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GALK2_chr15_49165247_49336882 | 49237449 | GTTTTTTG others(7): Show |
G | intron_variant | MODIFIER | NA18986.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0100 | 1 | 348 | 0.0029 | -14 | c.357 others(31): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
GALK2_chr15_49165247_49336882 | 49258792 | ATATGTGT others(7): Show |
A | intron_variant | MODIFIER | HG01167.hp2 HG01168.hp1 HG01169.hp1 others(15): Show |
a0001a0003 | a0001c0001a0003c0006 | a0001c0001t0001a0001c0001t0012a0001c0001t0013others(1): Show | a0001c0001t0001g0254a0001c0001t0001g0255a0001c0001t0001g0256others(15): Show | 18 | 348 | 0.0517 | -14 | c.504 others(33): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
GALK2_chr15_49165247_49336882 | 49277137 | ATTTTTTT others(7): Show |
A | intron_variant | MODIFIER | HG02165.hp1 HG02735.hp2 NA18999.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0009 | a0001c0001t0005g0213a0001c0001t0005g0232a0001c0001t0005g0239others(2): Show | 5 | 348 | 0.0144 | -14 | c.505 others(31): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
GALK2_chr15_49165247_49336882 | 49332087 | CCACACAC others(7): Show |
C | downstream_gene_variant | MODIFIER | HG01167.hp2 HG01169.hp1 HG01891.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0012 | a0001c0001t0001g0255a0001c0001t0001g0256a0001c0001t0001g0257others(8): Show | 11 | 348 | 0.0316 | -14 | c.*39 others(25): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 206 | chr15 | TogoVar | ||||||
GALM_chr2_38661114_38739765 | 38665483 | ATTTTTTT others(7): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00423.hp1 others(114): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0007others(114): Show | 117 | 328 | 0.3567 | -14 | c.-67 others(23): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 630 | chr2 | TogoVar | ||||||
GALM_chr2_38661114_38739765 | 38675543 | TTGTGTGT others(7): Show |
T | intron_variant | MODIFIER | HG02559.hp1 HG03225.hp1 HG03486.hp1 |
a0002 | a0002c0002 | a0002c0002t0004a0002c0002t0007 | a0002c0002t0004g0320a0002c0002t0004g0323a0002c0002t0007g0319 | 3 | 328 | 0.0092 | -14 | c.191 others(29): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALM_chr2_38661114_38739765 | 38703084 | ATATATAT others(7): Show |
A | intron_variant | MODIFIER | NA18963.hp1 NA19010.hp2 NA19075.hp1 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0004a0001c0001t0004g0040a0001c0001t0004g0050 | 3 | 328 | 0.0092 | -14 | c.634 others(33): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALM_chr2_38661114_38739765 | 38703086 | ATATATAT others(7): Show |
A | intron_variant | MODIFIER | HG02280.hp1 NA18946.hp1 NA18960.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0042a0001c0001t0002g0229a0001c0001t0004g0012 | 3 | 328 | 0.0092 | -14 | c.634 others(33): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALM_chr2_38661114_38739765 | 38717306 | AGTGTGTG others(7): Show |
A | intron_variant | MODIFIER | HG02615.hp1 | a0004 | a0004c0005 | a0004c0005t0002 | a0004c0005t0002g0126 | 1 | 328 | 0.0031 | -14 | c.635 others(33): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALM_chr2_38661114_38739765 | 38726212 | CTTTATTT others(7): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00609.hp1 others(93): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(22): Show | a0001c0001t0002g0015a0001c0001t0002g0016a0001c0001t0002g0017others(93): Show | 96 | 328 | 0.2927 | -14 | c.635 others(31): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNS_chr16_88808734_88861947 | 88831815 | GGGGAGGA others(7): Show |
G | intron_variant | MODIFIER | HG03491.hp2 HG03492.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0179a0001c0001t0001g0180 | 2 | 404 | 0.0050 | -14 | c.100 others(31): Show |
GALNS | ENSG00000141012.13 | transcript | ENST00000268695.10 | protein_coding | 9/13 | chr16 | TogoVar | ||||||
GALNS_chr16_88808734_88861947 | 88848290 | GACCCGCA others(7): Show |
G | intron_variant | MODIFIER | HG02109.hp1 HG02280.hp2 HG02451.hp1 others(6): Show |
a0004 | a0004c0005 | a0004c0005t0001 | a0004c0005t0001g0166a0004c0005t0001g0170a0004c0005t0001g0171others(6): Show | 9 | 404 | 0.0223 | -14 | c.121 others(31): Show |
GALNS | ENSG00000141012.13 | transcript | ENST00000268695.10 | protein_coding | 1/13 | chr16 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154219834 | TCTCTCAC others(7): Show |
T | intron_variant | MODIFIER | HG01167.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0077 | 1 | 236 | 0.0042 | -14 | c.159 others(33): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GALNT10_chr5_154185733_154425984 | 154294976 | TTGTGTGT others(7): Show |
T | intron_variant | MODIFIER | HG02970.hp1 | a0001 | a0001c0015 | a0001c0015t0041 | a0001c0015t0041g0062 | 1 | 236 | 0.0042 | -14 | c.262 others(27): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GALNT10_chr5_154185733_154425984 | 154330925 | GTGTGTGT others(7): Show |
G | intron_variant | MODIFIER | HG01081.hp1 | a0001 | a0001c0001 | a0001c0001t0022 | a0001c0001t0022g0016 | 1 | 236 | 0.0042 | -14 | c.568 others(31): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GALNT10_chr5_154185733_154425984 | 154363492 | GAAAAAAA others(7): Show |
G | intron_variant | MODIFIER | HG02559.hp1 HG02970.hp1 |
a0001 | a0001c0005a0001c0015 | a0001c0005t0025a0001c0015t0041 | a0001c0005t0025g0190a0001c0015t0041g0062 | 2 | 236 | 0.0085 | -14 | c.569 others(33): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GALNT11_chr7_152020674_152127340 | 152055520 | CGTGTGTG others(7): Show |
C | intron_variant | MODIFIER | HG02486.hp2 HG02572.hp1 HG02615.hp1 others(9): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0003a0001c0001t0004a0003c0003t0003 | a0001c0001t0003g0018a0001c0001t0003g0019a0001c0001t0003g0020others(9): Show | 12 | 284 | 0.0423 | -14 | c.-39 others(33): Show |
GALNT11 | ENSG00000178234.13 | transcript | ENST00000430044.7 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT11_chr7_152020674_152127340 | 152113712 | CTTTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp2 HG01884.hp2 others(9): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0003a0003c0003t0003 | a0001c0001t0001g0126a0001c0001t0001g0187a0001c0001t0003g0043others(9): Show | 12 | 284 | 0.0423 | -14 | c.123 others(31): Show |
GALNT11 | ENSG00000178234.13 | transcript | ENST00000430044.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 153963731 | CTGTGTGT others(7): Show |
C | intron_variant | MODIFIER | HG00735.hp1 HG01099.hp1 HG01169.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0013a0001c0001t0015others(3): Show | a0001c0001t0003g0010a0001c0001t0003g0028a0001c0001t0003g0029others(8): Show | 11 | 214 | 0.0514 | -14 | c.142 others(33): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 154110278 | GATATATA others(7): Show |
G | intron_variant | MODIFIER | HG01069.hp2 HG01070.hp1 HG01071.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(6): Show | a0001c0001t0002g0132a0001c0001t0003g0018a0001c0001t0005g0103others(8): Show | 11 | 214 | 0.0514 | -14 | c.143 others(33): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 154110324 | TATATATA others(7): Show |
T | intron_variant | MODIFIER | HG01106.hp1 HG01358.hp2 NA18993.hp1 |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0014a0001c0001t0021 | a0001c0001t0009g0127a0001c0001t0014g0143a0001c0001t0021g0214 | 3 | 214 | 0.0140 | -14 | c.143 others(33): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 154110326 | TATATATA others(7): Show |
T | intron_variant | MODIFIER | NA19083.hp1 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0102 | 1 | 214 | 0.0047 | -14 | c.143 others(33): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 154133532 | TTTTATAT others(7): Show |
T | intron_variant | MODIFIER | HG04184.hp1 | a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0181 | 1 | 214 | 0.0047 | -14 | c.143 others(31): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 154133534 | TTATATAT others(7): Show |
T | intron_variant | MODIFIER | HG01243.hp2 HG02451.hp2 HG03195.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0018a0001c0001t0060others(1): Show | a0001c0001t0010g0188a0001c0001t0018g0153a0001c0001t0060g0069others(1): Show | 4 | 214 | 0.0187 | -14 | c.143 others(31): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 154245172 | CTTTCCCT others(7): Show |
C | intron_variant | MODIFIER | HG02622.hp1 HG02630.hp2 HG03195.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0026a0001c0001t0035a0001c0001t0057others(1): Show | a0001c0001t0026g0184a0001c0001t0026g0185a0001c0001t0035g0098others(2): Show | 5 | 214 | 0.0234 | -14 | c.687 others(29): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 6/12 | chr2 | TogoVar | ||||||
GALNT13_chr2_153866922_154458979 | 154312219 | TGGGGAAC others(7): Show |
T | intron_variant | MODIFIER | NA18961.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0206 | 1 | 214 | 0.0047 | -14 | c.115 others(35): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 9/12 | chr2 | TogoVar | ||||||
GALNT13_chr2_153866922_154458979 | 154351682 | CAAAAAAA others(7): Show |
C | intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0018 | a0001c0001t0018g0165 | 1 | 214 | 0.0047 | -14 | c.115 others(35): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT13_chr2_153866922_154458979 | 154354405 | CTTTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00642.hp2 HG00735.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0009a0001c0001t0017others(6): Show | a0001c0001t0002g0116a0001c0001t0002g0128a0001c0001t0002g0129others(10): Show | 13 | 214 | 0.0608 | -14 | c.115 others(35): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GALNT14_chr2_30905467_31143440 | 30923056 | CTTTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG02451.hp1 HG02451.hp2 HG02559.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0002t0001others(1): Show | a0001c0001t0001g0013a0001c0001t0001g0095a0001c0001t0001g0097others(8): Show | 11 | 226 | 0.0487 | -14 | c.138 others(33): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 13/14 | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 30985049 | GGCCCACT others(7): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(174): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0005others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0010a0001c0001t0001g0011a0001c0001t0001g0012others(174): Show | 177 | 226 | 0.7832 | -14 | c.299 others(31): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 2/14 | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 31035604 | CACACACA others(7): Show |
C | intron_variant | MODIFIER | HG02004.hp2 HG02132.hp2 HG02280.hp2 others(5): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0010a0001c0001t0001g0061a0001c0001t0001g0093others(5): Show | 8 | 226 | 0.0354 | -14 | c.130 others(33): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 1/14 | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 31072261 | TCTCACAC others(7): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG01175.hp2 HG01346.hp2 others(20): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0019a0001c0001t0001g0077a0001c0001t0001g0080others(20): Show | 23 | 226 | 0.1018 | -14 | c.129 others(33): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 1/14 | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 31072268 | CACACACA others(7): Show |
C | intron_variant | MODIFIER | HG01361.hp1 HG01934.hp2 HG02132.hp1 others(7): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0002c0003others(3): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0002others(3): Show | a0001c0001t0001g0061a0001c0001t0001g0076a0001c0001t0001g0093others(7): Show | 10 | 226 | 0.0443 | -14 | c.129 others(33): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 1/14 | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 31090481 | CTTTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(15): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(2): Show | a0001c0001t0001g0029a0001c0001t0001g0044a0001c0001t0001g0053others(15): Show | 18 | 226 | 0.0797 | -14 | c.129 others(33): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 1/14 | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 31130771 | TGTGTGTG others(7): Show |
T | intron_variant | MODIFIER | HG02922.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0113 | 1 | 226 | 0.0044 | -14 | c.129 others(31): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 1/14 | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 31134426 | TACAGCAC others(7): Show |
T | intron_variant | MODIFIER | HG02486.hp1 HG02886.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0022a0001c0001t0001g0023 | 2 | 226 | 0.0089 | -14 | c.129 others(31): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 1/14 | chr2 | TogoVar | ||||||
GALNT15_chr3_16169680_16235165 | 16203539 | TCTCTCAC others(7): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01928.hp1 HG01943.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0250a0001c0001t0001g0343a0001c0001t0001g0344others(11): Show | 15 | 388 | 0.0387 | -14 | c.911 others(31): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
GALNT15_chr3_16169680_16235165 | 16203541 | TCTCACAC others(7): Show |
T | intron_variant | MODIFIER | HG01928.hp2 NA19003.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0297a0001c0001t0002g0316 | 2 | 388 | 0.0052 | -14 | c.911 others(31): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
GALNT15_chr3_16169680_16235165 | 16203576 | CACACACA others(7): Show |
C | intron_variant | MODIFIER | NA18957.hp1 NA18959.hp1 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0298a0001c0001t0004g0299 | 2 | 388 | 0.0052 | -14 | c.911 others(31): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 3/9 | chr3 | TogoVar | ||||||
GALNT15_chr3_16169680_16235165 | 16207530 | AAAAAAAA others(7): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(174): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0041others(15): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(34): Show | a0001c0001t0001g0006a0001c0001t0001g0018a0001c0001t0001g0070others(163): Show | 177 | 388 | 0.4562 | -14 | c.912 others(29): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 3/9 | chr3 | TogoVar | ||||||
GALNT15_chr3_16169680_16235165 | 16232502 | ATATATAT others(7): Show |
A | downstream_gene_variant | MODIFIER | HG00609.hp2 HG01346.hp2 HG02280.hp1 others(6): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0010a0003c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0010t0011others(2): Show | a0001c0001t0001g0018a0001c0001t0002g0108a0002c0010t0011g0329others(6): Show | 9 | 388 | 0.0232 | -14 | c.*50 others(25): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 2338 | chr3 | TogoVar | ||||||
GALNT16_chr14_69255158_69359466 | 69322969 | TGTGTGTG others(7): Show |
T | intron_variant | MODIFIER | HG02486.hp1 HG02615.hp1 HG02896.hp1 others(2): Show |
a0001a0003a0005 | a0001c0001a0001c0005a0001c0016others(2): Show | a0001c0001t0001a0001c0005t0006a0001c0016t0006others(2): Show | a0001c0001t0001g0041a0001c0005t0006g0177a0001c0016t0006g0156others(2): Show | 5 | 306 | 0.0163 | -14 | c.336 others(31): Show |
GALNT16 | ENSG00000100626.17 | transcript | ENST00000448469.8 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
GALNT17_chr7_71127144_71718599 | 71147191 | TTAGAGGG others(7): Show |
T | intron_variant | MODIFIER | HG02717.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0046 | 1 | 76 | 0.0132 | -14 | c.238 others(33): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT17_chr7_71127144_71718599 | 71270538 | CAAAAAAA others(7): Show |
C | intron_variant | MODIFIER | HG03704.hp2 HG04228.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0006 | a0001c0001t0005g0054a0001c0001t0006g0057 | 2 | 76 | 0.0263 | -14 | c.239 others(33): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT17_chr7_71127144_71718599 | 71409017 | AACACACA others(7): Show |
A | intron_variant | MODIFIER | HG00642.hp2 HG01106.hp1 |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0012 | a0001c0001t0011g0040a0001c0001t0012g0012 | 2 | 76 | 0.0263 | -14 | c.590 others(31): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT17_chr7_71127144_71718599 | 71614768 | AAGAAACA others(7): Show |
A | intron_variant | MODIFIER | HG04228.hp1 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0065 | 1 | 76 | 0.0132 | -14 | c.108 others(35): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 6/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT17_chr7_71127144_71718599 | 71701844 | TATATATA others(7): Show |
T | intron_variant | MODIFIER | HG00323.hp1 HG00642.hp1 HG00735.hp1 others(12): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0032a0001c0001t0001g0034a0001c0001t0001g0041others(12): Show | 15 | 76 | 0.1974 | -14 | c.150 others(33): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT17_chr7_71127144_71718599 | 71717233 | CTTTCTTT others(7): Show |
C | downstream_gene_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0075 | 1 | 76 | 0.0132 | -14 | c.*50 others(25): Show |
GALNT17 | ENSG00000185274.13 | transcript | ENST00000333538.10 | protein_coding | 3635 | chr7 | TogoVar | ||||||
GALNT18_chr11_11265877_11627005 | 11497327 | AACACACA others(7): Show |
A | intron_variant | MODIFIER | HG02723.hp1 | a0001 | a0001c0006 | a0001c0006t0002 | a0001c0006t0002g0027 | 1 | 260 | 0.0039 | -14 | c.236 others(33): Show |
GALNT18 | ENSG00000110328.6 | transcript | ENST00000227756.5 | protein_coding | 1/10 | chr11 | TogoVar | ||||||
GALNT18_chr11_11265877_11627005 | 11594842 | CACATATA others(7): Show |
C | intron_variant | MODIFIER | NA19043.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0181 | 1 | 260 | 0.0039 | -14 | c.235 others(33): Show |
GALNT18 | ENSG00000110328.6 | transcript | ENST00000227756.5 | protein_coding | 1/10 | chr11 | TogoVar |