Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GBF1_chr10_102240532_102387896	102312609	GGTTAAAA others(7): Show GGTTAAAAGATCTTA	G G	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0153 a0001c0001t0005g0153	1	330	0.0030	-14	c.164 others(33): Show c.164-31424_164-31411delAAAAGATCTTAGTT	GBF1	ENSG00000107862.7	transcript	ENST00000369983.5	protein_coding	3/39		INFO_REALIGN_3_PRIME	chr10	TogoVar
GBF1_chr10_102240532_102387896	102364166	TTAGTAAG others(7): Show TTAGTAAGGTTCAAA	T T	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0009 a0009	a0009c0015 a0009c0015	a0009c0015t0002 a0009c0015t0002	a0009c0015t0002g0062 a0009c0015t0002g0062	1	330	0.0030	-14	c.210 others(31): Show c.2106+385_2106+398delGTAAGGTTCAAATA	GBF1	ENSG00000107862.7	transcript	ENST00000369983.5	protein_coding	17/39		INFO_REALIGN_3_PRIME	chr10	TogoVar
GBGT1_chr9_133147948_133168914	133168349	ACTCTCTC others(7): Show ACTCTCTCTCTCTCT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp1 HG02647.hp2 HG02886.hp2 others(2): Show HG01081.hp1 HG02647.hp2 HG02886.hp2 HG03098.hp1 NA19078.hp1	a0001 a0002 a0011 others(1): Show a0001 a0002 a0011 a0022	a0001c0001 a0002c0004 a0011c0033 others(1): Show a0001c0001 a0002c0004 a0011c0033 a0022c0024	a0001c0001t0001 a0002c0004t0002 a0011c0033t0006 others(1): Show a0001c0001t0001 a0002c0004t0002 a0011c0033t0006 a0022c0024t0002	a0001c0001t0001g0016 a0001c0001t0001g0074 a0002c0004t0002g0131 others(2): Show a0001c0001t0001g0016 a0001c0001t0001g0074 a0002c0004t0002g0131 a0011c0033t0006g0173 a0022c0024t0002g0182	5	446	0.0112	-14	c.-47 others(25): Show c.-4730_-4717delAGAGAGAGAGAGAG	GBGT1	ENSG00000148288.13	transcript	ENST00000372040.9	protein_coding		4436		chr9	TogoVar
GBP1_chr1_89047319_89070208	89064199	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01496.hp2 HG02056.hp2 others(5): Show HG01099.hp1 HG01496.hp2 HG02056.hp2 HG02818.hp1 NA18965.hp1 NA18997.hp2 NA19001.hp1 NA19057.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0003 a0003c0003t0005 others(1): Show a0003c0003t0002 a0003c0003t0003 a0003c0003t0005 a0003c0003t0008	a0003c0003t0002g0030 a0003c0003t0003g0155 a0003c0003t0003g0156 others(3): Show a0003c0003t0002g0030 a0003c0003t0003g0155 a0003c0003t0003g0156 a0003c0003t0003g0178 a0003c0003t0005g0180 a0003c0003t0008g0179	8	430	0.0186	-14	c.-20 others(29): Show c.-20+947_-19-947delCACACACACACACA	GBP1	ENSG00000117228.11	transcript	ENST00000370473.5	protein_coding	1/10			chr1	TogoVar
GBP1_chr1_89047319_89070208	89064228	TGTGTGTG others(7): Show TGTGTGTGTGTGTGA	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02451.hp1 HG02572.hp2 HG01891.hp1 HG02451.hp1 HG02572.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0007 a0003c0003t0007	a0003c0003t0007g0028 a0003c0003t0007g0028	3	430	0.0070	-14	c.-20 others(29): Show c.-20+918_-20+931delTCACACACACACAC	GBP1	ENSG00000117228.11	transcript	ENST00000370473.5	protein_coding	1/10			chr1	TogoVar
GBP1_chr1_89047319_89070208	89064232	TGTGTGTG others(7): Show TGTGTGTGTGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0190 a0002c0002t0005g0190	1	430	0.0023	-14	c.-20 others(29): Show c.-20+914_-20+927delTCTCTCACACACAC	GBP1	ENSG00000117228.11	transcript	ENST00000370473.5	protein_coding	1/10			chr1	TogoVar
GBP3_chr1_89001680_89027866	89021788	TGAGAGAG others(7): Show TGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02109.hp2 HG02145.hp2 others(27): Show HG01109.hp2 HG02109.hp2 HG02145.hp2 HG02559.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02965.hp2 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA19030.hp2 NA20129.hp2 NA20300.hp1 NA21309.hp1	a0001 a0005 a0006 others(1): Show a0001 a0005 a0006 a0015	a0001c0001 a0005c0006 a0006c0007 others(1): Show a0001c0001 a0005c0006 a0006c0007 a0015c0018	a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 others(3): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0005c0006t0005 a0006c0007t0004 a0015c0018t0004	a0001c0001t0004g0006 a0001c0001t0004g0022 a0001c0001t0004g0023 others(14): Show a0001c0001t0004g0006 a0001c0001t0004g0022 a0001c0001t0004g0023 a0001c0001t0004g0054 a0001c0001t0004g0298 a0001c0001t0004g0301 a0001c0001t0004g0303 a0001c0001t0007g0296 a0001c0001t0007g0302 a0001c0001t0008g0055 a0001c0001t0008g0297 a0005c0006t0005g0300 a0006c0007t0004g0024 a0006c0007t0004g0056 a0006c0007t0004g0057 a0006c0007t0004g0299 a0015c0018t0004g0304	30	436	0.0688	-14	c.-23 others(29): Show c.-23+882_-23+895delTCTCTCTCTCTCTC	GBP3	ENSG00000117226.12	transcript	ENST00000370481.9	protein_coding	1/10			chr1	TogoVar
GBX2_chr2_236160236_236173386	236160238	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG02683.hp2 HG03239.hp2 HG00642.hp2 HG02683.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0004 a0001c0002t0002g0004	3	342	0.0088	-14	c.56 others(25): Show c.5662_*5675delACACACACACACAC	GBX2	ENSG00000168505.7	transcript	ENST00000306318.5	protein_coding		4997		chr2	TogoVar
GCA_chr2_162339132_162368123	162341267	TTATATAT others(7): Show TTATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG03130.hp1 HG03139.hp1 others(4): Show HG02486.hp2 HG03130.hp1 HG03139.hp1 HG03225.hp1 HG03516.hp1 HG03579.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0012 a0001c0001t0005g0108 a0001c0001t0005g0136 a0001c0001t0005g0012 a0001c0001t0005g0108 a0001c0001t0005g0136	7	366	0.0191	-14	c.-29 others(25): Show c.-2981_-2968delTATATATATATATA	GCA	ENSG00000115271.11	transcript	ENST00000437150.7	protein_coding		2864		chr2	TogoVar
GCC2_chr2_108444206_108514415	108448096	GCGCACAC others(7): Show GCGCACACGTGCACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0223 a0001c0001t0002g0223	1	276	0.0036	-14	c.-11 others(25): Show c.-1178_-1165delCGCACACGTGCACA	GCC2	ENSG00000135968.22	transcript	ENST00000309863.11	protein_coding		1109		chr2	TogoVar
GCC2_chr2_108444206_108514415	108449492	CCGTCCGC others(7): Show CCGTCCGCCCTCATT	C C	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0255 a0001c0001t0004g0255	1	276	0.0036	-14	c.7-1 others(25): Show c.7-139_7-126delGTCCGCCCTCATTC	GCC2	ENSG00000135968.22	transcript	ENST00000309863.11	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
GCC2_chr2_108444206_108514415	108459745	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01074.hp1 HG01099.hp2 others(12): Show HG00323.hp1 HG01074.hp1 HG01099.hp2 HG01257.hp2 HG01258.hp1 HG01884.hp1 HG01981.hp2 HG02145.hp2 HG02451.hp2 HG02738.hp1 HG02976.hp1 HG03491.hp2 HG03492.hp2 HG04199.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0003 a0001c0001t0005 a0001c0001t0017 others(2): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0017 a0001c0001t0025 a0001c0009t0003	a0001c0001t0003g0004 a0001c0001t0003g0096 a0001c0001t0003g0099 others(11): Show a0001c0001t0003g0004 a0001c0001t0003g0096 a0001c0001t0003g0099 a0001c0001t0003g0102 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0005g0004 a0001c0001t0005g0093 a0001c0001t0005g0101 a0001c0001t0017g0097 a0001c0001t0017g0098 a0001c0001t0025g0095 a0001c0001t0025g0100 a0001c0009t0003g0005	15	276	0.0544	-14	c.216 others(31): Show c.216+7299_216+7312delTTTTTTTTTTTTTT	GCC2	ENSG00000135968.22	transcript	ENST00000309863.11	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
GCC2_chr2_108444206_108514415	108462541	TGTCACAA others(7): Show TGTCACAAAGACTTC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00280.hp2 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG01071.hp1 HG01071.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01192.hp1 HG01256.hp1 HG01346.hp1 HG01361.hp2 HG01928.hp1 HG01928.hp2 HG01981.hp1 HG01993.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02148.hp1 HG02148.hp2 HG02486.hp1 HG02559.hp2 HG02630.hp1 HG02717.hp2 HG02886.hp2 HG02896.hp1 HG03492.hp1 HG03669.hp1 HG03688.hp1 HG03710.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04228.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18942.hp2 NA18945.hp2 NA18950.hp2 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18968.hp2 NA18969.hp1 NA18977.hp2 NA18984.hp2 NA18989.hp1 NA18989.hp2 NA18993.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19062.hp1 NA19066.hp1 NA19067.hp2 NA19070.hp2 NA19074.hp2 NA19080.hp1 NA19081.hp1 NA19082.hp2 NA19083.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0005 a0010 a0001 a0005 a0010	a0001c0002 a0001c0005 a0001c0015 others(2): Show a0001c0002 a0001c0005 a0001c0015 a0005c0010 a0010c0018	a0001c0002t0001 a0001c0002t0008 a0001c0002t0013 others(7): Show a0001c0002t0001 a0001c0002t0008 a0001c0002t0013 a0001c0002t0021 a0001c0002t0034 a0001c0002t0035 a0001c0005t0001 a0001c0015t0001 a0005c0010t0020 a0010c0018t0001	a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0009 others(83): Show a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0009 a0001c0002t0001g0010 a0001c0002t0001g0011 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0014 a0001c0002t0001g0015 a0001c0002t0001g0016 a0001c0002t0001g0022 a0001c0002t0001g0023 a0001c0002t0001g0024 a0001c0002t0001g0025 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0054 a0001c0002t0001g0055 a0001c0002t0001g0056 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0062 a0001c0002t0001g0064 a0001c0002t0001g0065 a0001c0002t0001g0067 a0001c0002t0001g0068 a0001c0002t0001g0070 a0001c0002t0001g0071 a0001c0002t0001g0072 a0001c0002t0001g0074 a0001c0002t0001g0075 a0001c0002t0001g0076 a0001c0002t0001g0077 a0001c0002t0001g0078 a0001c0002t0001g0079 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0083 a0001c0002t0001g0086 a0001c0002t0001g0091 a0001c0002t0001g0092 a0001c0002t0008g0017 a0001c0002t0008g0018 a0001c0002t0008g0019 a0001c0002t0008g0020 a0001c0002t0008g0084 a0001c0002t0008g0085 a0001c0002t0013g0088 a0001c0002t0013g0089 a0001c0002t0013g0090 a0001c0002t0021g0002 a0001c0002t0021g0087 a0001c0002t0034g0073 a0001c0002t0035g0082 a0001c0005t0001g0029 a0001c0005t0001g0034 a0001c0005t0001g0051 a0001c0005t0001g0052 a0001c0005t0001g0053 a0001c0015t0001g0069 a0005c0010t0020g0158 a0005c0010t0020g0159 a0010c0018t0001g0063	87	276	0.3152	-14	c.217 others(31): Show c.217-6437_217-6424delTCACAAAGACTTCG	GCC2	ENSG00000135968.22	transcript	ENST00000309863.11	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
GCH1_chr14_54837017_54907826	54838237	AAAAAAAA others(7): Show AAAAAAAAAAAAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp1 HG02257.hp1 HG02280.hp1 others(3): Show HG01496.hp1 HG02257.hp1 HG02280.hp1 NA19030.hp2 NA19240.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 others(3): Show a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0011g0282 a0001c0001t0011g0283 a0001c0001t0011g0284	6	346	0.0173	-14	c.57 others(25): Show c.5766_*5779delCTTTTTTTTTTTTT	GCH1	ENSG00000131979.20	transcript	ENST00000491895.7	protein_coding		3779		chr14	TogoVar
GCH1_chr14_54837017_54907826	54900845	TCACACAC others(7): Show TCACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02738.hp1 HG03098.hp2 others(5): Show HG00323.hp2 HG02738.hp1 HG03098.hp2 HG03490.hp2 HG03492.hp1 HG03704.hp2 HG04184.hp2 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 a0001c0001t0001 a0001c0001t0007 a0001c0001t0008	a0001c0001t0001g0286 a0001c0001t0007g0276 a0001c0001t0007g0277 others(5): Show a0001c0001t0001g0286 a0001c0001t0007g0276 a0001c0001t0007g0277 a0001c0001t0007g0278 a0001c0001t0007g0279 a0001c0001t0007g0280 a0001c0001t0007g0281 a0001c0001t0008g0302	8	346	0.0231	-14	c.343 others(31): Show c.343+1462_343+1475delTGTGTGTGTGTGTG	GCH1	ENSG00000131979.20	transcript	ENST00000491895.7	protein_coding	1/5			chr14	TogoVar
GCKR_chr2_27491839_27528684	27525801	TACACACA others(7): Show TACACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	324	0.0031	-14	c.23 others(25): Show c.2363_*2376delACACACACACACAC	GCKR	ENSG00000084734.9	transcript	ENST00000264717.7	protein_coding		2118		chr2	TogoVar
GCKR_chr2_27491839_27528684	27525833	CACACACA others(7): Show CACACACACACACAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG01109.hp2 HG02109.hp2 others(7): Show HG00738.hp2 HG01109.hp2 HG02109.hp2 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02922.hp2 HG02970.hp2 HG03098.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0105 others(4): Show a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0105 a0001c0001t0001g0198 a0001c0001t0001g0213 a0001c0001t0001g0219 a0001c0001t0001g0222	10	324	0.0309	-14	c.23 others(25): Show c.2395_*2408delACACACACACACAT	GCKR	ENSG00000084734.9	transcript	ENST00000264717.7	protein_coding		2150		chr2	TogoVar
GCM1_chr6_53121961_53153841	53142000	GAAAAAAA others(7): Show GAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA19090.hp2 NA20129.hp1 NA19090.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0036 a0001c0001t0001 a0001c0001t0036	a0001c0001t0001g0222 a0001c0001t0036g0035 a0001c0001t0001g0222 a0001c0001t0036g0035	2	412	0.0049	-14	c.75+ others(29): Show c.75+3544_75+3557delTTTTTTTTTTTTTT	GCM1	ENSG00000137270.11	transcript	ENST00000259803.8	protein_coding	2/5			chr6	TogoVar
GCM1_chr6_53121961_53153841	53142870	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0299 a0001c0001t0010g0299	1	412	0.0024	-14	c.75+ others(29): Show c.75+2674_75+2687delTTTTTTTTTTTTTT	GCM1	ENSG00000137270.11	transcript	ENST00000259803.8	protein_coding	2/5			chr6	TogoVar
GCM2_chr6_10868223_10887041	10871865	GATATATA others(7): Show GATATATATATATAT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02735.hp1 NA18977.hp1 NA18979.hp2 others(3): Show HG02735.hp1 NA18977.hp1 NA18979.hp2 NA18989.hp1 NA19059.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0001 a0001c0001t0001g0008	6	426	0.0141	-14	c.21 others(25): Show c.2116_*2129delATATATATATATAT	GCM2	ENSG00000124827.7	transcript	ENST00000379491.5	protein_coding		1357		chr6	TogoVar
GCM2_chr6_10868223_10887041	10881551	GGTATGTG others(7): Show GGTATGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02015.hp2 HG02027.hp1 others(15): Show HG00609.hp1 HG02015.hp2 HG02027.hp1 HG02056.hp2 HG02074.hp2 HG02129.hp1 HG02615.hp1 HG02886.hp2 HG02976.hp2 HG04115.hp1 NA18942.hp1 NA18947.hp2 NA18948.hp1 NA18955.hp1 NA18967.hp1 NA18978.hp1 NA18989.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0009 a0001c0001t0002g0022 a0001c0001t0002g0045 others(3): Show a0001c0001t0002g0009 a0001c0001t0002g0022 a0001c0001t0002g0045 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072	18	426	0.0423	-14	c.90+ others(27): Show c.90+139_90+152delACACACACACATAC	GCM2	ENSG00000124827.7	transcript	ENST00000379491.5	protein_coding	1/4			chr6	TogoVar
GCM2_chr6_10868223_10887041	10881554	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03491.hp2 HG03492.hp2 others(1): Show HG03017.hp1 HG03491.hp2 HG03492.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	4	426	0.0094	-14	c.90+ others(27): Show c.90+136_90+149delCACACACACACACA	GCM2	ENSG00000124827.7	transcript	ENST00000379491.5	protein_coding	1/4			chr6	TogoVar
GCNA_chrX_71573437_71618583	71589450	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03516.hp1 HG02922.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0134 a0001c0001t0001g0135	2	265	0.0076	-14	c.60- others(29): Show c.60-2652_60-2639delTTTTTTTTTTTTTT	GCNA	ENSG00000147174.12	transcript	ENST00000373696.8	protein_coding	2/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
GCNT2_chr6_10516351_10634368	10540092	GAAAGGAA others(7): Show GAAAGGAAGGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	324	0.0031	-14	c.925 others(33): Show c.925+10265_925+10278delGAAGGAAAAGGAAG	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10516351_10634368	10563767	AAAAAAAA others(7): Show AAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0003 a0001c0001t0027g0003	1	324	0.0031	-14	c.925 others(33): Show c.925+33933_925+33946delAAAAAAAAAATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10516351_10634368	10563769	AAAAAAAA others(7): Show AAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA19043.hp1 HG03579.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0030 a0001c0001t0011g0001 a0001c0001t0001g0030 a0001c0001t0011g0001	2	324	0.0062	-14	c.925 others(33): Show c.925+33935_925+33948delAAAAAAAATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10516351_10634368	10563771	AAAAAAAA others(7): Show AAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03195.hp2 HG06807.hp1 HG02717.hp2 HG03195.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0019 a0001c0001t0001 a0001c0001t0004 a0001c0001t0019	a0001c0001t0001g0215 a0001c0001t0004g0316 a0001c0001t0019g0127 a0001c0001t0001g0215 a0001c0001t0004g0316 a0001c0001t0019g0127	3	324	0.0093	-14	c.925 others(33): Show c.925+33937_925+33950delAAAAAATATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10516351_10634368	10563773	AAAAAATA others(7): Show AAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0234 a0001c0001t0003g0234	1	324	0.0031	-14	c.925 others(33): Show c.925+33939_925+33952delAAAATATATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10516351_10634368	10563775	AAAATATA others(7): Show AAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02486.hp1 HG03453.hp1 HG02258.hp1 HG02486.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0010 a0001c0001t0003 a0001c0001t0010	a0001c0001t0003g0239 a0001c0001t0010g0240 a0001c0001t0010g0242 a0001c0001t0003g0239 a0001c0001t0010g0240 a0001c0001t0010g0242	3	324	0.0093	-14	c.925 others(33): Show c.925+33941_925+33954delAATATATATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10516351_10634368	10585032	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG03516.hp2 NA18949.hp2 others(1): Show HG00735.hp2 HG03516.hp2 NA18949.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0029 others(1): Show a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0029 a0001c0001t0005g0026	4	324	0.0124	-14	c.926 others(33): Show c.926-36285_926-36272delTGTGTGTGTGTGTG	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10516351_10634368	10585066	TGTGTGTG others(7): Show TGTGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02965.hp2 HG03130.hp1 others(1): Show HG02622.hp2 HG02965.hp2 HG03130.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0004g0314 others(1): Show a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0004g0314 a0001c0001t0004g0316	4	324	0.0124	-14	c.926 others(33): Show c.926-36283_926-36270delTGTGTGTGTGTGCG	GCNT2	ENSG00000111846.20	transcript	ENST00000495262.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10550809_10634368	10563767	AAAAAAAA others(7): Show AAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0309 a0001c0001t0010g0309	1	344	0.0029	-14	c.919 others(31): Show c.919+6427_919+6440delAAAAAAAAAATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000316170.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10550809_10634368	10563769	AAAAAAAA others(7): Show AAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA19043.hp1 HG03579.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0306 a0001c0001t0001g0308 a0001c0001t0001g0306 a0001c0001t0001g0308	2	344	0.0058	-14	c.919 others(31): Show c.919+6429_919+6442delAAAAAAAATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000316170.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10550809_10634368	10563771	AAAAAAAA others(7): Show AAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03195.hp2 HG06807.hp1 others(1): Show HG02717.hp1 HG03195.hp2 HG06807.hp1 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0003 a0001c0004t0018 a0001c0001t0001 a0001c0004t0003 a0001c0004t0018	a0001c0001t0001g0089 a0001c0001t0001g0302 a0001c0004t0003g0328 others(1): Show a0001c0001t0001g0089 a0001c0001t0001g0302 a0001c0004t0003g0328 a0001c0004t0018g0329	4	344	0.0116	-14	c.919 others(31): Show c.919+6431_919+6444delAAAAAATATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000316170.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10550809_10634368	10563773	AAAAAATA others(7): Show AAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0280 a0001c0001t0001g0280	1	344	0.0029	-14	c.919 others(31): Show c.919+6433_919+6446delAAAATATATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000316170.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10550809_10634368	10563775	AAAATATA others(7): Show AAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02486.hp1 HG03453.hp2 others(1): Show HG02258.hp1 HG02486.hp1 HG03453.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0001 a0001c0001t0004 a0001c0001t0006	a0001c0001t0001g0086 a0001c0001t0004g0274 a0001c0001t0006g0001 a0001c0001t0001g0086 a0001c0001t0004g0274 a0001c0001t0006g0001	4	344	0.0116	-14	c.919 others(31): Show c.919+6435_919+6448delAATATATATATATA	GCNT2	ENSG00000111846.20	transcript	ENST00000316170.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10550809_10634368	10585032	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG03516.hp2 NA18949.hp1 others(1): Show HG00735.hp2 HG03516.hp2 NA18949.hp1 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0321 others(1): Show a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0321 a0001c0001t0005g0326	4	344	0.0116	-14	c.919 others(33): Show c.919+27724_919+27737delTGTGTGTGTGTGTG	GCNT2	ENSG00000111846.20	transcript	ENST00000316170.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT2_chr6_10550809_10634368	10585066	TGTGTGTG others(7): Show TGTGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02965.hp1 HG03130.hp2 others(1): Show HG02622.hp1 HG02965.hp1 HG03130.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0003 a0001c0001t0001 a0001c0004t0003	a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0004t0003g0328 others(1): Show a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0004t0003g0328 a0001c0004t0003g0330	4	344	0.0116	-14	c.919 others(33): Show c.919+27726_919+27739delTGTGTGTGTGTGCG	GCNT2	ENSG00000111846.20	transcript	ENST00000316170.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GCNT4_chr5_75020346_75057558	75032872	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01070.hp1 HG01071.hp2 others(3): Show HG00733.hp2 HG01070.hp1 HG01071.hp2 HG03225.hp2 NA18747.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0002c0002t0014 a0002c0002t0018 others(2): Show a0001c0001t0003 a0002c0002t0014 a0002c0002t0018 a0002c0002t0040 a0002c0002t0071	a0001c0001t0003g0196 a0002c0002t0014g0108 a0002c0002t0018g0298 others(2): Show a0001c0001t0003g0196 a0002c0002t0014g0108 a0002c0002t0018g0298 a0002c0002t0040g0013 a0002c0002t0071g0083	6	382	0.0157	-14	c.-1- others(29): Show c.-1-2848_-1-2835delACACACACACACAC	GCNT4	ENSG00000176928.7	transcript	ENST00000652361.2	protein_coding	3/3			chr5	TogoVar
GCNT4_chr5_75020346_75057558	75055400	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0014 a0002c0002t0014	a0002c0002t0014g0270 a0002c0002t0014g0270	1	382	0.0026	-14	c.-31 others(25): Show c.-3187_-3174delAAAAAAAAAAAAAA	GCNT4	ENSG00000176928.7	transcript	ENST00000652361.2	protein_coding		2843		chr5	TogoVar
GCSAML_chr1_247544134_247582690	247581553	AAAAAAAA others(7): Show AAAAAAAAAAAAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG01346.hp2 HG02258.hp1 others(9): Show HG00741.hp1 HG01346.hp2 HG02258.hp1 HG03130.hp2 HG03239.hp2 HG03516.hp2 HG03704.hp1 HG03927.hp1 HG04184.hp2 NA18906.hp2 NA19030.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 a0001c0001t0018	a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0123 others(6): Show a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0123 a0001c0001t0001g0170 a0001c0001t0001g0203 a0001c0001t0004g0027 a0001c0001t0004g0229 a0001c0001t0009g0086 a0001c0001t0018g0085	12	412	0.0291	-14	c.71 others(25): Show c.7172_*7185delAAAAAAAAAAAAAG	GCSAML	ENSG00000169224.13	transcript	ENST00000366488.5	protein_coding		3864		chr1	TogoVar
GCSH_chr16_81076945_81101395	81095377	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(300): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0002c0002 a0002c0005 others(4): Show a0001c0001 a0002c0002 a0002c0005 a0003c0003 a0004c0008 a0005c0006 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0002c0002t0001 a0002c0002t0002 a0002c0002t0010 a0002c0002t0014 a0002c0005t0008 a0003c0003t0004 a0003c0003t0006 a0004c0008t0001 a0005c0006t0013 a0006c0007t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(115): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0002g0094 a0001c0001t0002g0119 a0001c0001t0002g0135 a0001c0001t0002g0144 a0001c0001t0003g0004 a0001c0001t0003g0015 a0001c0001t0003g0118 a0001c0001t0003g0145 a0001c0001t0005g0023 a0001c0001t0005g0046 a0001c0001t0005g0047 a0001c0001t0011g0112 a0001c0001t0012g0090 a0001c0001t0015g0148 a0001c0001t0016g0155 a0002c0002t0001g0027 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0075 a0002c0002t0001g0082 a0002c0002t0001g0083 a0002c0002t0002g0002 a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0028 a0002c0002t0002g0074 a0002c0002t0002g0076 a0002c0002t0002g0077 a0002c0002t0002g0078 a0002c0002t0002g0080 a0002c0002t0002g0081 a0002c0002t0010g0079 a0002c0002t0014g0073 a0002c0005t0008g0071 a0002c0005t0008g0072 a0003c0003t0004g0022 a0003c0003t0004g0040 a0003c0003t0004g0041 a0003c0003t0004g0042 a0003c0003t0004g0149 a0003c0003t0004g0150 a0003c0003t0004g0151 a0003c0003t0006g0021 a0003c0003t0006g0152 a0003c0003t0006g0153 a0003c0003t0006g0154 a0004c0008t0001g0147 a0005c0006t0013g0098 a0006c0007t0001g0146	303	354	0.8559	-14	c.148 others(29): Show c.148+740_148+753delAAAAAAAAAAAAAA	GCSH	ENSG00000140905.11	transcript	ENST00000315467.9	protein_coding	1/4			chr16	TogoVar
GDA_chr9_72144440_72257224	72148309	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	312	0.0032	-14	c.-12 others(25): Show c.-1250_-1237delTGTGTGTGTGTGTG	GDA	ENSG00000119125.17	transcript	ENST00000358399.8	protein_coding		1130		chr9	TogoVar
GDA_chr9_72144440_72257224	72189166	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp1 HG00597.hp2 others(60): Show HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00738.hp1 HG00741.hp1 HG01256.hp1 HG01258.hp1 HG01346.hp2 HG01433.hp2 HG01517.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02132.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02523.hp1 HG03492.hp1 HG03831.hp1 HG03927.hp1 HG04228.hp1 NA18942.hp1 NA18944.hp2 NA18947.hp1 NA18950.hp1 NA18960.hp1 NA18962.hp1 NA18963.hp1 NA18967.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18974.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18992.hp1 NA18994.hp1 NA18995.hp2 NA19000.hp1 NA19004.hp1 NA19006.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19058.hp1 NA19062.hp1 NA19064.hp2 NA19065.hp2 NA19066.hp2 NA19070.hp2 NA19076.hp2 NA19084.hp2 NA19088.hp1 NA19091.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0022 a0001c0001t0029 a0001c0001t0030 a0001c0001t0033	a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0012 others(57): Show a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0103 a0001c0001t0001g0128 a0001c0001t0001g0209 a0001c0001t0001g0246 a0001c0001t0002g0023 a0001c0001t0003g0047 a0001c0001t0005g0002 a0001c0001t0005g0013 a0001c0001t0005g0015 a0001c0001t0005g0033 a0001c0001t0005g0036 a0001c0001t0005g0039 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0005g0046 a0001c0001t0005g0052 a0001c0001t0005g0057 a0001c0001t0005g0059 a0001c0001t0005g0064 a0001c0001t0005g0065 a0001c0001t0005g0066 a0001c0001t0005g0067 a0001c0001t0006g0001 a0001c0001t0022g0056 a0001c0001t0029g0055 a0001c0001t0030g0027 a0001c0001t0033g0022	63	312	0.2019	-14	c.124 others(31): Show c.124-6317_124-6304delTTTTTTTTTTTTTT	GDA	ENSG00000119125.17	transcript	ENST00000358399.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr9	TogoVar
GDF5_chr20_35428347_35443228	35435450	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02809.hp1 HG02630.hp1 HG02809.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0026 a0002c0002t0007g0026	2	360	0.0056	-14	c.632 others(29): Show c.632-681_632-668delTTTTTTTTTTTTTT	GDF5	ENSG00000125965.9	transcript	ENST00000374369.8	protein_coding	1/1			chr20	TogoVar
GDF7_chr2_20662144_20684243	20671825	GCTTTATC others(7): Show GCTTTATCTCACCCC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03927.hp2 HG04199.hp1 HG03927.hp2 HG04199.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0246 a0005c0007t0247 a0005c0007t0246 a0005c0007t0247	a0005c0007t0246g0016 a0005c0007t0247g0029 a0005c0007t0246g0016 a0005c0007t0247g0029	2	442	0.0045	-14	c.40 others(23): Show c.405_*418delATCTCACCCCCTTT	GDF7	ENSG00000143869.7	transcript	ENST00000272224.5	protein_coding	2/2	405	INFO_REALIGN_3_PRIME	chr2	TogoVar
GDI1_chrX_154432154_154448467	154446351	GGAAGGGG others(7): Show GGAAGGGGCTGGGTC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0002	1	283	0.0035	-14	c.36 others(25): Show c.3680_*3693delGAAGGGGCTGGGTC	GDI1	ENSG00000203879.12	transcript	ENST00000447750.7	protein_coding		2885		chrX	TogoVar
GDI2_chr10_5760223_5818434	5789739	ATTTAATC others(7): Show ATTTAATCACAAAAC	A A	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0084 a0001c0001t0002g0084	1	398	0.0025	-14	c.389 others(31): Show c.389-3703_389-3690delGTTTTGTGATTAAA	GDI2	ENSG00000057608.17	transcript	ENST00000380191.9	protein_coding	4/10			chr10	TogoVar
GDI2_chr10_5760223_5818434	5794186	AAAATATA others(7): Show AAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02451.hp2 HG02109.hp1 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0303 a0001c0001t0001g0304	2	398	0.0050	-14	c.388 others(29): Show c.388+685_388+698delATATATATATATTT	GDI2	ENSG00000057608.17	transcript	ENST00000380191.9	protein_coding	4/10			chr10	TogoVar
GDI2_chr10_5760223_5818434	5794188	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG02258.hp2 HG02976.hp2 others(4): Show HG01070.hp2 HG02258.hp2 HG02976.hp2 HG03130.hp2 NA18941.hp2 NA20805.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 others(4): Show a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0217 a0001c0001t0001g0241 a0001c0002t0002g0053 a0001c0002t0002g0078	7	398	0.0176	-14	c.388 others(29): Show c.388+683_388+696delATATATATATATAT	GDI2	ENSG00000057608.17	transcript	ENST00000380191.9	protein_coding	4/10			chr10	TogoVar

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