Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GLIS3_chr9_3819127_4305068	4303647	AGACCAAA others(7): Show AGACCAAATGCAACT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG03130.hp2 HG02055.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0037 a0001c0001t0036 a0001c0001t0037	a0001c0001t0036g0008 a0001c0001t0037g0009 a0001c0001t0036g0008 a0001c0001t0037g0009	2	188	0.0106	-14	c.-43 others(25): Show c.-4339_-4326delAGTTGCATTTGGTC	GLIS3	ENSG00000107249.24	transcript	ENST00000381971.8	protein_coding		3580		chr9	TogoVar
GLMP_chr1_156287688_156300679	156292376	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00323.hp2 others(61): Show HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG01074.hp2 HG01106.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp2 HG01346.hp1 HG01361.hp2 HG02027.hp2 HG02080.hp2 HG02135.hp1 HG02135.hp2 HG02559.hp1 HG02735.hp1 HG02738.hp2 HG03130.hp1 HG03239.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03688.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 NA18747.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18950.hp2 NA18951.hp1 NA18961.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp1 NA19000.hp1 NA19005.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19054.hp1 NA19055.hp2 NA19060.hp2 NA19064.hp1 NA19067.hp2 NA19070.hp2 NA19078.hp1 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19087.hp1 NA19088.hp1 NA20752.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0010 a0001c0001 a0002c0002 a0006c0010	a0001c0001t0001 a0002c0002t0002 a0006c0010t0001 a0001c0001t0001 a0002c0002t0002 a0006c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0014 a0002c0002t0002g0002 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0002c0002t0002g0002 a0006c0010t0001g0018	64	396	0.1616	-14	c.65 others(23): Show c.654_*667delACACACACACACAC	GLMP	ENSG00000198715.13	transcript	ENST00000362007.6	protein_coding		311		chr1	TogoVar
GLMP_chr1_156287688_156300679	156296601	TATATATA others(7): Show TATATATAGAGAGAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18961.hp2 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	396	0.0025	-14	c.-97 others(23): Show c.-970_-957delCTCTCTCTATATAT	GLMP	ENSG00000198715.13	transcript	ENST00000362007.6	protein_coding		923		chr1	TogoVar
GLO1_chr6_38670925_38708145	38693673	CTCTCTCT others(7): Show CTCTCTCTCTCTCTA	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0168 a0001c0003t0004g0168	1	410	0.0024	-14	c.85- others(29): Show c.85-6713_85-6700delTAGAGAGAGAGAGA	GLO1	ENSG00000124767.7	transcript	ENST00000373365.5	protein_coding	1/5			chr6	TogoVar
GLO1_chr6_38670925_38708145	38693675	CTCTCTCT others(7): Show CTCTCTCTCTCTATA	C C	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG03491.hp2 HG03669.hp2 HG01255.hp1 HG03491.hp2 HG03669.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0004 a0001c0003t0001 a0001c0003t0004	a0001c0003t0001g0170 a0001c0003t0004g0039 a0001c0003t0001g0170 a0001c0003t0004g0039	3	410	0.0073	-14	c.85- others(29): Show c.85-6715_85-6702delTATAGAGAGAGAGA	GLO1	ENSG00000124767.7	transcript	ENST00000373365.5	protein_coding	1/5			chr6	TogoVar
GLO1_chr6_38670925_38708145	38693677	CTCTCTCT others(7): Show CTCTCTCTCTATATA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01069.hp1 HG01071.hp1 others(4): Show HG00140.hp1 HG01069.hp1 HG01071.hp1 HG01192.hp2 HG03654.hp2 HG03927.hp1 HG04228.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0016 a0001c0003t0004 a0001c0003t0016	a0001c0003t0004g0015 a0001c0003t0004g0148 a0001c0003t0004g0166 others(2): Show a0001c0003t0004g0015 a0001c0003t0004g0148 a0001c0003t0004g0166 a0001c0003t0004g0167 a0001c0003t0016g0169	7	410	0.0171	-14	c.85- others(29): Show c.85-6717_85-6704delTATATAGAGAGAGA	GLO1	ENSG00000124767.7	transcript	ENST00000373365.5	protein_coding	1/5			chr6	TogoVar
GLO1_chr6_38670925_38708145	38707581	GAGGAAAG others(7): Show GAGGAAAGAAAGGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	410	0.0024	-14	c.-45 others(25): Show c.-4541_-4528delTTCCTTTCTTTCCT	GLO1	ENSG00000124767.7	transcript	ENST00000373365.5	protein_coding		4437		chr6	TogoVar
GLO1_chr6_38670925_38708145	38707676	GAAAGAAA others(7): Show GAAAGAAAGGAAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0144 a0002c0002t0007g0144	1	410	0.0024	-14	c.-46 others(25): Show c.-4636_-4623delTTCTTCCTTTCTTT	GLO1	ENSG00000124767.7	transcript	ENST00000373365.5	protein_coding		4532		chr6	TogoVar
GLP1R_chr6_39043781_39096303	39086166	GACACACA others(7): Show GACACACACACACAC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0121 a0002c0001t0121	a0002c0001t0121g0068 a0002c0001t0121g0068	1	438	0.0023	-14	c.11 others(23): Show c.119_*132delCACACACACACACA	GLP1R	ENSG00000112164.6	transcript	ENST00000373256.5	protein_coding	13/13	119	INFO_REALIGN_3_PRIME	chr6	TogoVar
GLRA2_chrX_14524536_14736812	14557102	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(12): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00741.hp2 HG01081.hp2 HG01123.hp1 HG01256.hp1 HG01261.hp1 HG01433.hp1 HG01516.hp1 HG01517.hp2 HG02004.hp2 HG02040.hp1 HG02735.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0020 a0001c0002t0005 a0001c0002t0007 a0001c0002t0011	a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0003g0206 others(12): Show a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0003g0206 a0001c0001t0005g0216 a0001c0001t0006g0218 a0001c0001t0020g0207 a0001c0002t0005g0010 a0001c0002t0005g0205 a0001c0002t0005g0213 a0001c0002t0005g0214 a0001c0002t0005g0215 a0001c0002t0007g0208 a0001c0002t0007g0209 a0001c0002t0007g0210 a0001c0002t0011g0217	15	232	0.0647	-14	c.203 others(33): Show c.203-17213_203-17200delTTTTTTTTTTTTTT	GLRA2	ENSG00000101958.14	transcript	ENST00000218075.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GLRA2_chrX_14524536_14736812	14581766	GCACACAC others(7): Show GCACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0071 a0001c0001t0010g0071	1	232	0.0043	-14	c.494 others(29): Show c.494+387_494+400delCACACACACACACA	GLRA2	ENSG00000101958.14	transcript	ENST00000218075.9	protein_coding	4/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GLRA2_chrX_14524536_14736812	14604543	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02630.hp1 HG03195.hp2 HG02451.hp2 HG02630.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018	a0001c0001t0014g0228 a0001c0001t0017g0078 a0001c0001t0018g0080 a0001c0001t0014g0228 a0001c0001t0017g0078 a0001c0001t0018g0080	3	232	0.0129	-14	c.577 others(29): Show c.577+183_577+196delGTGTGTGTGTGTGT	GLRA2	ENSG00000101958.14	transcript	ENST00000218075.9	protein_coding	5/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GLRA2_chrX_14524536_14736812	14608557	TTATATGC others(7): Show TTATATGCTATATAG	T T	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG04184.hp1 HG03017.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0035 a0001c0001t0003g0037 a0001c0001t0003g0035 a0001c0001t0003g0037	2	232	0.0086	-14	c.716 others(29): Show c.716-423_716-410delATAGTATATGCTAT	GLRA2	ENSG00000101958.14	transcript	ENST00000218075.9	protein_coding	6/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GLRA2_chrX_14524536_14736812	14691271	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG01109.hp1 others(16): Show HG00140.hp1 HG00280.hp1 HG01109.hp1 HG01123.hp1 HG01256.hp1 HG01261.hp1 HG01433.hp1 HG02015.hp1 HG02109.hp2 HG02258.hp1 HG02572.hp1 HG02922.hp2 HG02976.hp1 HG03098.hp1 HG03209.hp1 HG03486.hp1 HG03540.hp2 HG04199.hp1 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 a0001c0002 a0001c0003 a0001c0004	a0001c0002t0005 a0001c0002t0007 a0001c0002t0011 others(7): Show a0001c0002t0005 a0001c0002t0007 a0001c0002t0011 a0001c0002t0023 a0001c0002t0028 a0001c0002t0039 a0001c0002t0047 a0001c0003t0025 a0001c0003t0030 a0001c0004t0032	a0001c0002t0005g0002 a0001c0002t0005g0010 a0001c0002t0005g0015 others(16): Show a0001c0002t0005g0002 a0001c0002t0005g0010 a0001c0002t0005g0015 a0001c0002t0005g0205 a0001c0002t0005g0214 a0001c0002t0007g0114 a0001c0002t0007g0209 a0001c0002t0007g0210 a0001c0002t0011g0086 a0001c0002t0011g0217 a0001c0002t0023g0065 a0001c0002t0023g0186 a0001c0002t0028g0062 a0001c0002t0039g0184 a0001c0002t0047g0183 a0001c0003t0025g0175 a0001c0003t0025g0181 a0001c0003t0030g0198 a0001c0004t0032g0005	19	232	0.0819	-14	c.108 others(31): Show c.1080+453_1080+466delTGTGTGTGTGTGTG	GLRA2	ENSG00000101958.14	transcript	ENST00000218075.9	protein_coding	8/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GLRA2_chrX_14524536_14736812	14691312	TGTGTGTG others(7): Show TGTGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02683.hp1 HG04115.hp2 HG02055.hp1 HG02683.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0029 a0001c0001t0001g0066 a0001c0001t0008g0227 a0001c0001t0001g0029 a0001c0001t0001g0066 a0001c0001t0008g0227	3	232	0.0129	-14	c.108 others(31): Show c.1080+455_1080+468delTGTGTGTGTGTGCG	GLRA2	ENSG00000101958.14	transcript	ENST00000218075.9	protein_coding	8/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GLRA2_chrX_14524536_14736812	14730891	TACACACA others(7): Show TACACACACACACAC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01070.hp1 HG01928.hp1 HG01952.hp1 others(18): Show HG01070.hp1 HG01928.hp1 HG01952.hp1 HG02004.hp1 HG02056.hp1 HG02080.hp2 HG02630.hp1 HG02717.hp1 HG02738.hp1 HG03041.hp1 HG03098.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18957.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA19058.hp1 NA19063.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0004 a0001c0001t0014 a0001c0002t0014 others(1): Show a0001c0001t0004 a0001c0001t0014 a0001c0002t0014 a0001c0004t0032	a0001c0001t0004g0021 a0001c0001t0004g0027 a0001c0001t0004g0069 others(18): Show a0001c0001t0004g0021 a0001c0001t0004g0027 a0001c0001t0004g0069 a0001c0001t0004g0081 a0001c0001t0004g0119 a0001c0001t0004g0126 a0001c0001t0004g0150 a0001c0001t0004g0155 a0001c0001t0004g0156 a0001c0001t0004g0159 a0001c0001t0004g0162 a0001c0001t0004g0164 a0001c0001t0004g0197 a0001c0001t0004g0202 a0001c0001t0004g0203 a0001c0001t0004g0204 a0001c0001t0004g0220 a0001c0001t0014g0228 a0001c0002t0014g0025 a0001c0002t0014g0026 a0001c0004t0032g0005	21	232	0.0905	-14	c.45 others(23): Show c.452_*465delCACACACACACACA	GLRA2	ENSG00000101958.14	transcript	ENST00000218075.9	protein_coding	9/9	452	INFO_REALIGN_3_PRIME	chrX	TogoVar
GLRA3_chr4_174631920_174834247	174637563	GGATACTG others(7): Show GGATACTGTGTATGT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0050 a0001c0001t0050	a0001c0001t0050g0237 a0001c0001t0050g0237	1	296	0.0034	-14	c.62 others(25): Show c.6209_*6222delACATACACAGTATC	GLRA3	ENSG00000145451.13	transcript	ENST00000274093.8	protein_coding	10/10	6209		chr4	TogoVar
GLRA3_chr4_174631920_174834247	174688317	TCATATAT others(7): Show TCATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01169.hp1 HG02735.hp1 others(8): Show HG01168.hp2 HG01169.hp1 HG02735.hp1 HG03490.hp2 HG03491.hp2 HG03654.hp1 HG03927.hp2 HG04115.hp2 HG06807.hp2 NA18960.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 others(5): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0001t0083 a0001c0002t0004 a0001c0002t0046 a0001c0003t0004 a0001c0003t0011	a0001c0001t0001g0286 a0001c0001t0004g0235 a0001c0001t0004g0255 others(8): Show a0001c0001t0001g0286 a0001c0001t0004g0235 a0001c0001t0004g0255 a0001c0001t0004g0288 a0001c0001t0011g0289 a0001c0001t0083g0202 a0001c0002t0004g0027 a0001c0002t0004g0028 a0001c0002t0046g0260 a0001c0003t0004g0137 a0001c0003t0011g0142	11	296	0.0372	-14	c.575 others(31): Show c.575-5392_575-5379delTATATATATATATG	GLRA3	ENSG00000145451.13	transcript	ENST00000274093.8	protein_coding	5/9			chr4	TogoVar
GLRA3_chr4_174631920_174834247	174688318	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01168.hp1 HG02602.hp2 others(2): Show HG00621.hp1 HG01168.hp1 HG02602.hp2 HG02717.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006	a0001c0001t0001 a0001c0002t0001 a0001c0005t0007 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0005t0007 a0001c0005t0038 a0001c0006t0007	a0001c0001t0001g0270 a0001c0002t0001g0061 a0001c0005t0007g0180 others(2): Show a0001c0001t0001g0270 a0001c0002t0001g0061 a0001c0005t0007g0180 a0001c0005t0038g0264 a0001c0006t0007g0118	5	296	0.0169	-14	c.575 others(31): Show c.575-5393_575-5380delATATATATATATAT	GLRA3	ENSG00000145451.13	transcript	ENST00000274093.8	protein_coding	5/9			chr4	TogoVar
GLRA3_chr4_174631920_174834247	174721812	AATATGTG others(7): Show AATATGTGTGTGTAT	A A	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0026 a0001c0006t0026	a0001c0006t0026g0013 a0001c0006t0026g0013	1	296	0.0034	-14	c.492 others(31): Show c.492-6256_492-6243delATACACACACATAT	GLRA3	ENSG00000145451.13	transcript	ENST00000274093.8	protein_coding	4/9			chr4	TogoVar
GLRX2_chr1_193091470_193110414	193109522	GAAAAAAA others(7): Show GAAAAAAAAAAAAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG00738.hp1 HG01070.hp2 others(9): Show HG00642.hp2 HG00738.hp1 HG01070.hp2 HG01071.hp2 HG01109.hp2 HG01361.hp2 HG02258.hp2 HG02280.hp1 HG03516.hp2 NA18522.hp1 NA20129.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0023 a0001c0001t0001g0053 others(1): Show a0001c0001t0001g0005 a0001c0001t0001g0023 a0001c0001t0001g0053 a0001c0001t0001g0054	12	386	0.0311	-14	c.-41 others(25): Show c.-4154_-4141delTTTTTTTTTTTTTT	GLRX2	ENSG00000023572.10	transcript	ENST00000367439.8	protein_coding		4109		chr1	TogoVar
GLS2_chr12_56465952_56493161	56491192	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	1	362	0.0028	-14	c.-30 others(25): Show c.-3088_-3075delCACACACACACACA	GLS2	ENSG00000135423.13	transcript	ENST00000311966.9	protein_coding		3032		chr12	TogoVar
GLS_chr2_190875821_190970552	190880387	AGTTCCGA others(7): Show AGTTCCGACAGCTCG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG01255.hp2 others(10): Show HG01167.hp1 HG01169.hp2 HG01255.hp2 HG01261.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp1 NA18940.hp1 NA18947.hp1 NA19001.hp1 NA19007.hp2 NA19066.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006	a0001c0001t0002g0042 a0001c0001t0003g0008 a0001c0001t0003g0040 others(9): Show a0001c0001t0002g0042 a0001c0001t0003g0008 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0076 a0001c0001t0003g0078 a0001c0001t0006g0052	13	380	0.0342	-14	c.-69 others(23): Show c.-697_-684delGTTCCGACAGCTCG	GLS	ENSG00000115419.14	transcript	ENST00000320717.8	protein_coding		433		chr2	TogoVar
GLS_chr2_190875821_190970552	190942067	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19054.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0330 a0001c0001t0009g0330	1	380	0.0026	-14	c.165 others(35): Show c.1650+10447_1650+10460delTTTTTTTTTTTTTT	GLS	ENSG00000115419.14	transcript	ENST00000320717.8	protein_coding	14/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
GLT1D1_chr12_128848478_128989968	128873913	CTCTTTCT others(7): Show CTCTTTCTTTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0017 a0001c0002t0017	a0001c0002t0017g0063 a0001c0002t0017g0063	1	320	0.0031	-14	c.69- others(29): Show c.69-1977_69-1964delTTCTTTCTTTCTTT	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128874086	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01952.hp2 HG02071.hp1 others(5): Show HG00408.hp1 HG01952.hp2 HG02071.hp1 HG02135.hp1 HG03490.hp2 NA18980.hp2 NA19007.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0228 a0001c0001t0001g0245 a0001c0001t0001g0250 others(5): Show a0001c0001t0001g0228 a0001c0001t0001g0245 a0001c0001t0001g0250 a0001c0002t0001g0047 a0001c0002t0001g0054 a0001c0002t0001g0055 a0001c0002t0001g0128 a0001c0002t0002g0025	8	320	0.0250	-14	c.69- others(29): Show c.69-1824_69-1811delTTCTTTCTTTCTCT	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128874090	TTCTTTCT others(7): Show TTCTTTCTTTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0276 a0001c0001t0001g0276	1	320	0.0031	-14	c.69- others(29): Show c.69-1820_69-1807delTTCTTTCTCTCTCT	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128874118	CTCTCTCT others(7): Show CTCTCTCTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0032	1	320	0.0031	-14	c.69- others(29): Show c.69-1792_69-1779delCTCTCTTTCTTTCT	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128874126	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01175.hp2 HG01516.hp2 others(6): Show HG00408.hp2 HG01175.hp2 HG01516.hp2 HG02027.hp2 HG03098.hp1 HG03453.hp2 NA19058.hp2 NA19085.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0090 others(6): Show a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0090 a0001c0001t0001g0177 a0001c0001t0001g0221 a0001c0001t0002g0254 a0001c0001t0002g0279 a0001c0001t0004g0263 a0001c0001t0005g0099	9	320	0.0281	-14	c.69- others(29): Show c.69-1786_69-1773delTTCTTTCTTTCTTT	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128881534	GAAAAAAA others(7): Show GAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0138 a0001c0002t0003g0138	1	320	0.0031	-14	c.217 others(31): Show c.217+5487_217+5500delAAAAAAAAAAAAAA	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128919980	TCTCTCTC others(7): Show TCTCTCTCTCTCCCC	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02004.hp2 HG02451.hp1 others(5): Show HG01109.hp2 HG02004.hp2 HG02451.hp1 NA18948.hp1 NA18960.hp1 NA18983.hp2 NA19063.hp1 NA19063.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0003c0005t0004	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 others(5): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0176 a0001c0001t0002g0235 a0001c0001t0003g0273 a0003c0005t0004g0145	8	320	0.0250	-14	c.469 others(31): Show c.469+4995_469+5008delTCTCTCTCCCCCTC	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128922922	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00408.hp2 others(59): Show HG00099.hp1 HG00280.hp2 HG00408.hp2 HG00544.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01099.hp2 HG01167.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01952.hp1 HG02004.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02148.hp1 HG02280.hp1 HG02683.hp1 HG02809.hp1 HG02976.hp2 HG03139.hp1 HG03239.hp1 HG03540.hp1 HG03704.hp2 HG03927.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18965.hp1 NA18968.hp2 NA18970.hp2 NA18980.hp1 NA18982.hp1 NA19000.hp1 NA19004.hp1 NA19004.hp2 NA19007.hp2 NA19010.hp1 NA19011.hp2 NA19056.hp2 NA19058.hp1 NA19067.hp2 NA19068.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0002c0007 a0009c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0014 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0006 a0001c0002t0012 a0001c0004t0001 a0001c0004t0005 a0002c0007t0001 a0002c0007t0002 a0002c0007t0005 a0009c0013t0004	a0001c0001t0001g0069 a0001c0001t0001g0080 a0001c0001t0001g0093 others(59): Show a0001c0001t0001g0069 a0001c0001t0001g0080 a0001c0001t0001g0093 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0210 a0001c0001t0001g0217 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0262 a0001c0001t0001g0295 a0001c0001t0002g0097 a0001c0001t0002g0123 a0001c0001t0002g0185 a0001c0001t0002g0190 a0001c0001t0002g0279 a0001c0001t0002g0300 a0001c0001t0003g0205 a0001c0001t0003g0253 a0001c0001t0003g0258 a0001c0001t0003g0306 a0001c0001t0003g0308 a0001c0001t0003g0309 a0001c0001t0004g0149 a0001c0001t0006g0100 a0001c0001t0010g0303 a0001c0001t0010g0307 a0001c0001t0014g0195 a0001c0002t0001g0026 a0001c0002t0001g0066 a0001c0002t0001g0104 a0001c0002t0001g0108 a0001c0002t0001g0114 a0001c0002t0001g0117 a0001c0002t0001g0122 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0002t0001g0140 a0001c0002t0001g0142 a0001c0002t0001g0233 a0001c0002t0001g0272 a0001c0002t0001g0313 a0001c0002t0002g0025 a0001c0002t0002g0078 a0001c0002t0002g0150 a0001c0002t0002g0265 a0001c0002t0003g0113 a0001c0002t0003g0121 a0001c0002t0003g0230 a0001c0002t0005g0102 a0001c0002t0005g0103 a0001c0002t0006g0058 a0001c0002t0012g0095 a0001c0004t0001g0186 a0001c0004t0005g0252 a0002c0007t0001g0209 a0002c0007t0002g0224 a0002c0007t0005g0212 a0009c0013t0004g0312	62	320	0.1938	-14	c.470 others(31): Show c.470-3426_470-3413delAAAAAAAAAAAAAA	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128986825	ATAAATAC others(7): Show ATAAATACACATATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00408.hp1 others(111): Show HG00099.hp1 HG00323.hp2 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00639.hp1 HG00639.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01167.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp1 HG01496.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01952.hp1 HG01952.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp2 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02451.hp2 HG02523.hp2 HG02602.hp2 HG02615.hp1 HG02683.hp1 HG02717.hp2 HG02886.hp1 HG02965.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp2 HG03540.hp2 HG03704.hp1 HG03710.hp2 HG03834.hp1 HG03927.hp2 HG04184.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp2 NA18960.hp1 NA18968.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18989.hp1 NA18999.hp1 NA19000.hp2 NA19004.hp1 NA19007.hp1 NA19010.hp2 NA19011.hp1 NA19030.hp1 NA19054.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19079.hp1 NA19088.hp2 NA20129.hp1 NA20752.hp2 NA20805.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0004 others(6): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0002c0003 a0002c0007 a0003c0005 a0004c0010 a0004c0015	a0001c0001t0001 a0001c0001t0009 a0001c0001t0015 others(10): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0015 a0001c0002t0001 a0001c0002t0006 a0001c0002t0009 a0001c0004t0001 a0001c0006t0001 a0002c0003t0001 a0002c0007t0001 a0003c0005t0001 a0004c0010t0001 a0004c0015t0001	a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0014 others(111): Show a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0032 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0062 a0001c0001t0001g0071 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0124 a0001c0001t0001g0146 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0178 a0001c0001t0001g0183 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0198 a0001c0001t0001g0214 a0001c0001t0001g0221 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0232 a0001c0001t0001g0238 a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0247 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0262 a0001c0001t0001g0264 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0285 a0001c0001t0001g0290 a0001c0001t0001g0299 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0009g0056 a0001c0001t0015g0239 a0001c0002t0001g0024 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0047 a0001c0002t0001g0051 a0001c0002t0001g0053 a0001c0002t0001g0054 a0001c0002t0001g0055 a0001c0002t0001g0066 a0001c0002t0001g0075 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0117 a0001c0002t0001g0119 a0001c0002t0001g0125 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0142 a0001c0002t0001g0152 a0001c0002t0001g0155 a0001c0002t0001g0233 a0001c0002t0001g0272 a0001c0002t0001g0296 a0001c0002t0001g0305 a0001c0002t0001g0310 a0001c0002t0001g0313 a0001c0002t0001g0319 a0001c0002t0006g0105 a0001c0002t0009g0116 a0001c0004t0001g0200 a0001c0006t0001g0106 a0002c0003t0001g0269 a0002c0003t0001g0314 a0002c0003t0001g0315 a0002c0007t0001g0209 a0003c0005t0001g0088 a0003c0005t0001g0317 a0004c0010t0001g0109 a0004c0010t0001g0110 a0004c0015t0001g0166	114	320	0.3563	-14	c.37 others(25): Show c.3736_*3749delTAAATACACATATG	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding		1858		chr12	TogoVar
GLT1D1_chr12_128848478_128989968	128987057	TGTATATA others(7): Show TGTATATACATGTGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00609.hp2 HG00735.hp2 others(17): Show HG00099.hp2 HG00609.hp2 HG00735.hp2 HG01243.hp2 HG01433.hp2 HG01891.hp1 HG02055.hp2 HG02083.hp2 HG02148.hp1 HG02602.hp1 HG02698.hp1 HG02717.hp1 HG02970.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03942.hp1 HG04199.hp1 HG04199.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 others(17): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0147 a0001c0001t0001g0159 a0001c0001t0001g0210 a0001c0001t0001g0240 a0001c0001t0001g0274 a0001c0001t0001g0277 a0001c0001t0001g0280 a0001c0001t0001g0282 a0001c0001t0001g0297 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0046 a0001c0002t0001g0065 a0001c0002t0001g0089 a0001c0002t0001g0131 a0001c0002t0001g0137 a0001c0002t0001g0144	20	320	0.0625	-14	c.39 others(25): Show c.3968_*3981delGTATATACATGTGC	GLT1D1	ENSG00000151948.12	transcript	ENST00000442111.7	protein_coding		2090		chr12	TogoVar
GLT6D1_chr9_135618648_135644540	135624724	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0068 a0001c0001t0001g0068	1	436	0.0023	-14	c.258 others(27): Show c.258-68_258-55delAAAAAAAAAAAAAA	GLT6D1	ENSG00000204007.8	transcript	ENST00000371763.6	protein_coding	4/4			chr9	TogoVar
GLT8D2_chr12_103983987_104055187	103990078	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01433.hp1 HG01928.hp1 others(7): Show HG01257.hp1 HG01433.hp1 HG01928.hp1 HG01993.hp2 HG02129.hp1 HG02300.hp2 HG03927.hp2 HG06807.hp1 HG06807.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0045 others(7): Show a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0045 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0100 a0001c0001t0001g0131 a0001c0001t0001g0144 a0001c0001t0001g0310 a0001c0001t0002g0371	10	416	0.0240	-14	c.881 others(29): Show c.881-515_881-502delATATATATATATAT	GLT8D2	ENSG00000120820.13	transcript	ENST00000360814.9	protein_coding	10/10			chr12	TogoVar
GLT8D2_chr12_103983987_104055187	103997914	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG03017.hp2 HG03669.hp2 others(3): Show HG02735.hp2 HG03017.hp2 HG03669.hp2 HG03834.hp1 HG04199.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0036 a0001c0001t0001g0065 a0001c0001t0003g0159 others(3): Show a0001c0001t0001g0036 a0001c0001t0001g0065 a0001c0001t0003g0159 a0001c0001t0003g0161 a0001c0001t0003g0315 a0001c0001t0003g0332	6	416	0.0144	-14	c.403 others(29): Show c.403-393_403-380delGTGTGTGTGTGTGT	GLT8D2	ENSG00000120820.13	transcript	ENST00000360814.9	protein_coding	6/10			chr12	TogoVar
GLYATL2_chr11_58829065_58849704	58831272	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0040 a0003c0003t0002g0040	1	380	0.0026	-14	c.31 others(25): Show c.3143_*3156delCACACACACACACA	GLYATL2	ENSG00000156689.7	transcript	ENST00000287275.6	protein_coding		2792		chr11	TogoVar
GLYATL3_chr6_49494923_49533078	49509940	TTTTCTTT others(7): Show TTTTCTTTCTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00558.hp1 HG00741.hp2 others(22): Show HG00099.hp1 HG00558.hp1 HG00741.hp2 HG01069.hp1 HG01099.hp2 HG01257.hp2 HG01258.hp2 HG01516.hp2 HG01517.hp1 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02602.hp1 HG02602.hp2 HG02738.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03540.hp2 HG04184.hp2 NA18959.hp1 NA18974.hp1 NA19043.hp1 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0003 a0001c0007 a0002c0003	a0001c0007t0001 a0002c0003t0001 a0002c0003t0002 a0001c0007t0001 a0002c0003t0001 a0002c0003t0002	a0001c0007t0001g0008 a0001c0007t0001g0043 a0001c0007t0001g0216 others(17): Show a0001c0007t0001g0008 a0001c0007t0001g0043 a0001c0007t0001g0216 a0002c0003t0001g0016 a0002c0003t0001g0035 a0002c0003t0001g0045 a0002c0003t0001g0222 a0002c0003t0001g0225 a0002c0003t0001g0236 a0002c0003t0001g0237 a0002c0003t0001g0239 a0002c0003t0001g0240 a0002c0003t0001g0241 a0002c0003t0001g0269 a0002c0003t0001g0272 a0002c0003t0001g0277 a0002c0003t0001g0278 a0002c0003t0001g0279 a0002c0003t0002g0235 a0002c0003t0002g0238	25	380	0.0658	-14	c.-28 others(31): Show c.-28-2013_-28-2000delCTTTCTTTCTTTCT	GLYATL3	ENSG00000203972.10	transcript	ENST00000371197.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr6	TogoVar
GLYATL3_chr6_49494923_49533078	49516559	GTGAATCC others(7): Show GTGAATCCACTGAGT	G G	intron_variant intron_variant	MODIFIER	NA18999.hp1 NA18999.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0280 a0001c0002t0002g0280	1	380	0.0026	-14	c.186 others(29): Show c.186+801_186+814delGAATCCACTGAGTT	GLYATL3	ENSG00000203972.10	transcript	ENST00000371197.9	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr6	TogoVar
GLYR1_chr16_4798203_4852288	4804933	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0043 a0001c0001t0043	a0001c0001t0043g0086 a0001c0001t0043g0086	1	352	0.0028	-14	c.28 others(23): Show c.289_*302delCACACACACACACA	GLYR1	ENSG00000140632.17	transcript	ENST00000321919.14	protein_coding	16/16	289		chr16	TogoVar
GLYR1_chr16_4798203_4852288	4806608	GCCTCGAC others(7): Show GCCTCGACCCTGCCT	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG06807.hp2 HG02896.hp2 HG02897.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0043 a0001c0001t0021 a0001c0001t0043	a0001c0001t0021g0084 a0001c0001t0021g0085 a0001c0001t0043g0086 a0001c0001t0021g0084 a0001c0001t0021g0085 a0001c0001t0043g0086	3	352	0.0085	-14	c.158 others(33): Show c.1588-1312_1588-1299delAGGCAGGGTCGAGG	GLYR1	ENSG00000140632.17	transcript	ENST00000321919.14	protein_coding	15/15			chr16	TogoVar
GMDS_chr6_1618806_2250605	1642153	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	166	0.0060	-14	c.988 others(33): Show c.988-17627_988-17614delAAAAAAAAAAAAAA	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	9/10			chr6	TogoVar
GMDS_chr6_1618806_2250605	1655482	CACACACA others(7): Show CACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0149 a0001c0001t0001g0149	1	166	0.0060	-14	c.988 others(33): Show c.988-30956_988-30943delATGTGTGTGTGTGT	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	9/10			chr6	TogoVar
GMDS_chr6_1618806_2250605	1758439	GAATACCT others(7): Show GAATACCTGGGAGTA	G G	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0052	1	166	0.0060	-14	c.772 others(33): Show c.772-15867_772-15854delTACTCCCAGGTATT	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	7/10			chr6	TogoVar
GMDS_chr6_1618806_2250605	1764993	CCTTTAAT others(7): Show CCTTTAATAGTGTTG	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0004 a0001c0001t0002g0004	1	166	0.0060	-14	c.772 others(33): Show c.772-22421_772-22408delCAACACTATTAAAG	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	7/10			chr6	TogoVar
GMDS_chr6_1618806_2250605	1798237	GCACACAC others(7): Show GCACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0059 a0001c0002t0002g0059	1	166	0.0060	-14	c.772 others(33): Show c.772-55665_772-55652delTGTGTGTGTGTGTG	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	7/10			chr6	TogoVar
GMDS_chr6_1618806_2250605	2025357	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA18948.hp1 NA19063.hp2 NA20300.hp2 NA18948.hp1 NA19063.hp2 NA20300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0015 a0001c0002t0001g0067 a0001c0002t0001g0159 a0001c0002t0001g0015 a0001c0002t0001g0067 a0001c0002t0001g0159	3	166	0.0181	-14	c.346 others(33): Show c.346-64405_346-64392delACACACACACACAC	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	4/10			chr6	TogoVar
GMDS_chr6_1618806_2250605	2162659	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG03453.hp1 HG00323.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0163 a0001c0002t0001g0154 a0001c0001t0001g0163 a0001c0002t0001g0154	2	166	0.0121	-14	c.103 others(33): Show c.103-37942_103-37929delGTGTGTGTGTGTGT	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	1/10			chr6	TogoVar
GMDS_chr6_1618806_2250605	2162697	CACACACA others(7): Show CACACACACACACAA	C C	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	166	0.0060	-14	c.103 others(33): Show c.103-37980_103-37967delTTGTGTGTGTGTGT	GMDS	ENSG00000112699.11	transcript	ENST00000380815.5	protein_coding	1/10			chr6	TogoVar

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