Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GRM5_chr11_88499642_89070982	88978474	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03195.hp2 HG02257.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0013 a0001c0001t0007g0014 a0001c0001t0001g0013 a0001c0001t0007g0014	2	184	0.0109	-14	c.661 others(33): Show c.661+68724_661+68737delTTTTTTTTTTTTTT	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	2/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	89064913	TGTGAGAG others(7): Show TGTGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG02155.hp2 NA18960.hp1 NA19084.hp2 HG02155.hp2 NA18960.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0031 a0001c0001t0001 a0001c0001t0002 a0001c0001t0031	a0001c0001t0001g0039 a0001c0001t0002g0040 a0001c0001t0031g0062 a0001c0001t0001g0039 a0001c0001t0002g0040 a0001c0001t0031g0062	3	184	0.0163	-14	c.-20 others(31): Show c.-201+849_-201+862delTCTCTCTCTCTCAC	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	1/9			chr11	TogoVar
GRM6_chr5_178973327_179000320	178982576	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0002 a0002	a0002c0013 a0002c0013	a0002c0013t0002 a0002c0013t0002	a0002c0013t0002g0277 a0002c0013t0002g0277	1	468	0.0021	-14	c.243 others(31): Show c.2436+320_2436+333delTTTTTTTTTTTTTT	GRM6	ENSG00000113262.16	transcript	ENST00000517717.3	protein_coding	10/10			chr5	TogoVar
GRM7_chr3_6856115_7746533	6877809	TCACACAC others(7): Show TCACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01978.hp1 HG03579.hp1 others(3): Show HG01358.hp1 HG01978.hp1 HG03579.hp1 HG03831.hp2 NA18974.hp1 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(2): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0017	a0001c0001t0001 a0001c0003t0001 a0001c0004t0003 others(2): Show a0001c0001t0001 a0001c0003t0001 a0001c0004t0003 a0001c0005t0001 a0001c0017t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0003t0001g0052 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0003t0001g0052 a0001c0004t0003g0079 a0001c0005t0001g0074 a0001c0017t0001g0041	6	80	0.0750	-14	c.519 others(33): Show c.519+15933_519+15946delCACACACACACACA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	6914674	TACAGGTG others(7): Show TACAGGTGTGAGCCA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02145.hp1 HG02258.hp1 others(3): Show HG01884.hp1 HG02145.hp1 HG02258.hp1 HG02717.hp1 HG03486.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0009 others(1): Show a0001c0001 a0001c0004 a0001c0009 a0001c0014	a0001c0001t0002 a0001c0001t0005 a0001c0004t0001 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0004t0001 a0001c0009t0001 a0001c0014t0002	a0001c0001t0002g0051 a0001c0001t0002g0066 a0001c0001t0005g0072 others(3): Show a0001c0001t0002g0051 a0001c0001t0002g0066 a0001c0001t0005g0072 a0001c0004t0001g0076 a0001c0009t0001g0049 a0001c0014t0002g0011	6	80	0.0750	-14	c.519 others(33): Show c.519+52768_519+52781delACAGGTGTGAGCCA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9			chr3	TogoVar
GRM7_chr3_6856115_7746533	6927465	GAAAGAAA others(7): Show GAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0014 a0001c0002t0006g0014	1	80	0.0125	-14	c.519 others(33): Show c.519+65560_519+65573delAAGAAAGAAAGAAA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7033720	CCATCCCA others(7): Show CCATCCCAGTTTGAA	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02965.hp2 HG03486.hp1 others(1): Show HG02717.hp2 HG02965.hp2 HG03486.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005	a0001c0001t0005 a0001c0002t0002 a0001c0004t0002 others(1): Show a0001c0001t0005 a0001c0002t0002 a0001c0004t0002 a0001c0005t0001	a0001c0001t0005g0055 a0001c0002t0002g0023 a0001c0004t0002g0013 others(1): Show a0001c0001t0005g0055 a0001c0002t0002g0023 a0001c0004t0002g0013 a0001c0005t0001g0022	4	80	0.0500	-14	c.520 others(35): Show c.520-112728_520-112715delCCCAGTTTGAACAT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7103802	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0049 a0001c0009t0001g0049	1	80	0.0125	-14	c.520 others(33): Show c.520-42648_520-42635delTTCTTTCTTTCTTT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7162729	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03831.hp2 HG02622.hp1 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0001 a0001c0013t0001 a0001c0001t0001 a0001c0013t0001	a0001c0001t0001g0003 a0001c0013t0001g0048 a0001c0001t0001g0003 a0001c0013t0001g0048	2	80	0.0250	-14	c.736 others(33): Show c.736+16096_736+16109delTTTTTTTTTTTTTT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7167973	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02559.hp2 HG02717.hp2 others(5): Show HG02109.hp1 HG02559.hp2 HG02717.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03098.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0015 a0001c0001 a0001c0002 a0001c0015	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0002t0002 a0001c0002t0006 a0001c0015t0009	a0001c0001t0001g0026 a0001c0001t0001g0070 a0001c0001t0005g0055 others(5): Show a0001c0001t0001g0026 a0001c0001t0001g0070 a0001c0001t0005g0055 a0001c0001t0005g0072 a0001c0001t0006g0010 a0001c0002t0002g0024 a0001c0002t0006g0014 a0001c0015t0009g0045	8	80	0.1000	-14	c.736 others(33): Show c.736+21329_736+21342delAAAAAAAAAAAAAA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7229720	CACACACA others(7): Show CACACACATATATAT	C C	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0025 a0001c0001t0002g0025	1	80	0.0125	-14	c.737 others(33): Show c.737-68962_737-68949delCACACATATATATA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7229722	CACACATA others(7): Show CACACATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02572.hp2 HG02976.hp1 others(2): Show HG01884.hp1 HG02572.hp2 HG02976.hp1 HG03486.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0011	a0001c0001t0002 a0001c0001t0003 a0001c0003t0002 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0003t0002 a0001c0004t0001 a0001c0011t0002	a0001c0001t0002g0051 a0001c0001t0003g0012 a0001c0003t0002g0056 others(2): Show a0001c0001t0002g0051 a0001c0001t0003g0012 a0001c0003t0002g0056 a0001c0004t0001g0076 a0001c0011t0002g0078	5	80	0.0625	-14	c.737 others(33): Show c.737-68960_737-68947delCACATATATATATA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7256619	ACACACAC others(7): Show ACACACACACACATG	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02572.hp1 HG02717.hp1 others(3): Show HG02258.hp2 HG02572.hp1 HG02717.hp1 HG03209.hp1 HG03471.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 a0001c0003t0001 a0001c0003t0002 a0001c0004t0004	a0001c0001t0001g0003 a0001c0001t0002g0066 a0001c0002t0002g0030 others(3): Show a0001c0001t0001g0003 a0001c0001t0002g0066 a0001c0002t0002g0030 a0001c0003t0001g0037 a0001c0003t0002g0019 a0001c0004t0004g0043	6	80	0.0750	-14	c.737 others(33): Show c.737-42051_737-42038delGCACACACACACAT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7276201	ATATATAT others(7): Show ATATATATGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0046 a0001c0002t0004g0047 a0001c0002t0004g0046 a0001c0002t0004g0047	2	80	0.0250	-14	c.737 others(33): Show c.737-22481_737-22468delATATATGTGTGTGT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7291489	GCTCTCTC others(7): Show GCTCTCTCTCTCTCT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01258.hp1 HG01358.hp2 others(2): Show HG00140.hp2 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0018	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0004t0001 a0001c0018t0001	a0001c0001t0001g0001 a0001c0001t0002g0064 a0001c0003t0001g0053 others(2): Show a0001c0001t0001g0001 a0001c0001t0002g0064 a0001c0003t0001g0053 a0001c0004t0001g0071 a0001c0018t0001g0040	5	80	0.0625	-14	c.737 others(31): Show c.737-7143_737-7130delTCTCTCTCTCTCTC	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7356920	TCACACAC others(7): Show TCACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0079 a0001c0004t0003g0079	1	80	0.0125	-14	c.103 others(35): Show c.1033+50299_1033+50312delCACACACACACACA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7454090	ACTCTCTC others(7): Show ACTCTCTCTCTCTCT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0019 a0001c0003t0002g0019	1	80	0.0125	-14	c.137 others(33): Show c.1375+1309_1375+1322delTCTCTCTCTCTCTC	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7550567	CTCTCTCT others(7): Show CTCTCTCTCTCTGTG	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG04115.hp1 HG02559.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0001 a0001c0015	a0001c0001t0001 a0001c0015t0009 a0001c0001t0001 a0001c0015t0009	a0001c0001t0001g0009 a0001c0015t0009g0045 a0001c0001t0001g0009 a0001c0015t0009g0045	2	80	0.0250	-14	c.151 others(35): Show c.1516-27853_1516-27840delCTCTCTCTCTGTGT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7567747	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01069.hp2 HG01106.hp2 others(13): Show HG00738.hp1 HG01069.hp2 HG01106.hp2 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01884.hp1 HG02258.hp2 HG02280.hp1 HG02622.hp1 HG02922.hp2 HG02976.hp1 HG03195.hp2 HG03579.hp2 NA19030.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(4): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0009 a0001c0011 a0001c0013	a0001c0001t0002 a0001c0003t0001 a0001c0003t0002 others(9): Show a0001c0001t0002 a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 a0001c0004t0001 a0001c0004t0003 a0001c0005t0001 a0001c0005t0003 a0001c0005t0008 a0001c0009t0001 a0001c0011t0002 a0001c0013t0001	a0001c0001t0002g0025 a0001c0003t0001g0037 a0001c0003t0001g0053 others(13): Show a0001c0001t0002g0025 a0001c0003t0001g0037 a0001c0003t0001g0053 a0001c0003t0002g0044 a0001c0003t0004g0061 a0001c0003t0004g0062 a0001c0004t0001g0071 a0001c0004t0001g0076 a0001c0004t0003g0054 a0001c0005t0001g0022 a0001c0005t0001g0034 a0001c0005t0003g0039 a0001c0005t0008g0028 a0001c0009t0001g0069 a0001c0011t0002g0078 a0001c0013t0001g0048	16	80	0.2000	-14	c.151 others(35): Show c.1516-10650_1516-10637delAAAAAAAAAAAAAA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7572823	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03831.hp2 HG03209.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0003 a0001c0001t0003g0063 a0001c0001t0001g0003 a0001c0001t0003g0063	2	80	0.0250	-14	c.151 others(33): Show c.1516-5555_1516-5542delTATATATATATATA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7726613	CTATATAT others(7): Show CTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG02622.hp2 HG03471.hp2 others(1): Show HG00140.hp2 HG02622.hp2 HG03471.hp2 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0018 a0001c0002 a0001c0004 a0001c0018	a0001c0002t0002 a0001c0004t0003 a0001c0004t0004 others(1): Show a0001c0002t0002 a0001c0004t0003 a0001c0004t0004 a0001c0018t0001	a0001c0002t0002g0023 a0001c0004t0003g0058 a0001c0004t0004g0043 others(1): Show a0001c0002t0002g0023 a0001c0004t0003g0058 a0001c0004t0004g0043 a0001c0018t0001g0040	4	80	0.0500	-14	c.269 others(35): Show c.2699-13705_2699-13692delTATATATATATATA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM8_chr7_126433598_127257941	126453070	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0029	1	108	0.0093	-14	c.243 others(33): Show c.2431-6712_2431-6699delGTGTGTGTGTGTGT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	9/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126477575	GAAAGAGA others(7): Show GAAAGAGAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 NA18992.hp2 HG02886.hp1 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0065 a0001c0001t0002g0078 a0001c0001t0001g0065 a0001c0001t0002g0078	2	108	0.0185	-14	c.243 others(35): Show c.2431-31217_2431-31204delTTCTTTCTCTCTTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	9/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126532764	GATATATA others(7): Show GATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0016	1	108	0.0093	-14	c.243 others(31): Show c.2430+174_2430+187delATATATATATATAT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	9/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126643313	AAAAAAAA others(7): Show AAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	108	0.0093	-14	c.135 others(35): Show c.1358-33829_1358-33816delATATATATTTTTTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	7/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126662536	AAAGGTGG others(7): Show AAAGGTGGGGGCAGG	A A	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	108	0.0093	-14	c.135 others(35): Show c.1358-53052_1358-53039delCCTGCCCCCACCTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	7/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126763464	TATATATA others(7): Show TATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG02976.hp1 NA19240.hp2 HG02976.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0005 a0001c0004t0006 a0001c0001t0005 a0001c0004t0006	a0001c0001t0005g0073 a0001c0004t0006g0004 a0001c0001t0005g0073 a0001c0004t0006g0004	2	108	0.0185	-14	c.135 others(33): Show c.1357+6387_1357+6400delGTGTGTATATATAT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	7/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126903565	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0040 a0002c0002t0001g0040	1	108	0.0093	-14	c.101 others(31): Show c.1018+393_1018+406delGTGTGTGTGTGTGT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	5/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126903761	ATATATGT others(7): Show ATATATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0073 a0001c0001t0005g0073	1	108	0.0093	-14	c.101 others(31): Show c.1018+197_1018+210delCACACACACATATA	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	5/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	127165141	GATATATA others(7): Show GATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0058	1	108	0.0093	-14	c.511 others(33): Show c.511-58443_511-58430delATATATATATATAT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	2/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	127182632	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01433.hp1 HG01943.hp1 others(9): Show HG00639.hp2 HG01433.hp1 HG01943.hp1 HG02280.hp1 HG02886.hp1 HG02965.hp1 HG02970.hp1 HG03491.hp1 HG03654.hp1 NA18522.hp1 NA20129.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0002c0002t0001	a0001c0001t0001g0008 a0001c0001t0001g0045 a0001c0001t0001g0092 others(9): Show a0001c0001t0001g0008 a0001c0001t0001g0045 a0001c0001t0001g0092 a0001c0001t0001g0097 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0078 a0001c0001t0002g0089 a0001c0001t0007g0107 a0002c0002t0001g0031	12	108	0.1111	-14	c.510 others(33): Show c.510+60049_510+60062delACACACACACACAC	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	2/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	127223443	GCACACAC others(7): Show GCACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01943.hp1 HG02145.hp2 others(17): Show HG01433.hp1 HG01943.hp1 HG02145.hp2 HG02280.hp1 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02970.hp1 HG02976.hp1 HG03195.hp2 HG03453.hp1 HG03491.hp1 HG03654.hp2 NA18522.hp1 NA19043.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0005 a0003c0003 others(1): Show a0001c0001 a0001c0005 a0003c0003 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0005t0001 a0003c0003t0001 a0006c0009t0002	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0016 others(17): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0049 a0001c0001t0001g0060 a0001c0001t0001g0080 a0001c0001t0001g0087 a0001c0001t0001g0092 a0001c0001t0001g0097 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0078 a0001c0001t0002g0102 a0001c0001t0005g0073 a0001c0001t0007g0107 a0001c0005t0001g0063 a0003c0003t0001g0100 a0003c0003t0001g0101 a0006c0009t0002g0010	20	108	0.1852	-14	c.510 others(33): Show c.510+19238_510+19251delTGTGTGTGTGTGTG	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	2/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	127235965	TCATACTA others(7): Show TCATACTATGTATTG	T T	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01074.hp2 HG01257.hp2 others(8): Show HG01071.hp2 HG01074.hp2 HG01257.hp2 HG01943.hp1 HG02145.hp1 HG02280.hp1 HG02723.hp2 HG03453.hp2 HG04184.hp2 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0011 a0001c0001t0001g0092 a0001c0001t0001g0093 others(8): Show a0001c0001t0001g0011 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0002g0103 a0002c0002t0001g0095 a0002c0002t0002g0098 a0002c0002t0002g0099	11	108	0.1019	-14	c.510 others(31): Show c.510+6716_510+6729delCAATACATAGTATG	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	2/10			chr7	TogoVar
GRPEL2_chr5_149340499_149359583	149346715	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00423.hp1 HG01070.hp2 others(21): Show HG00099.hp1 HG00423.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01243.hp2 HG01928.hp2 HG02486.hp2 HG02572.hp1 HG02738.hp2 HG03669.hp2 NA18939.hp2 NA18944.hp2 NA18952.hp2 NA18965.hp1 NA18971.hp1 NA18975.hp2 NA19005.hp2 NA19009.hp2 NA19070.hp1 NA19076.hp2 NA19091.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0016 others(2): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017 a0001c0001t0028	a0001c0001t0004g0006 a0001c0001t0004g0022 a0001c0001t0009g0034 others(3): Show a0001c0001t0004g0006 a0001c0001t0004g0022 a0001c0001t0009g0034 a0001c0001t0016g0006 a0001c0001t0017g0006 a0001c0001t0028g0083	24	386	0.0622	-14	c.77+ others(29): Show c.77+1126_77+1139delTTTTTTTTTTTTTT	GRPEL2	ENSG00000164284.15	transcript	ENST00000329271.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRPEL2_chr5_149340499_149359583	149353561	TTTTTTGG others(7): Show TTTTTTGGTTTTTGG	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0001 a0001c0001t0022g0001	1	386	0.0026	-14	c.22 others(25): Show c.2299_*2312delGGTTTTTGGTTTTT	GRPEL2	ENSG00000164284.15	transcript	ENST00000329271.8	protein_coding	4/4	2299	INFO_REALIGN_3_PRIME	chr5	TogoVar
GRP_chr18_59215158_59235771	59226991	TCCTTTCT others(7): Show TCCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0067 a0002c0003t0001g0067	1	408	0.0025	-14	c.382 others(31): Show c.382+1258_382+1271delCCTTTCTTTCTTTC	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding	2/2			chr18	TogoVar
GRP_chr18_59215158_59235771	59233939	TATATATC others(7): Show TATATATCATATGTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 NA18954.hp1 NA18968.hp2 others(4): Show HG00609.hp1 NA18954.hp1 NA18968.hp2 NA18991.hp2 NA19083.hp2 NA19087.hp2 NA19090.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0014 a0002c0002t0001g0036 a0002c0002t0001g0014 a0002c0002t0001g0036	7	408	0.0172	-14	c.34 others(25): Show c.3472_*3485delATATATCATATGTC	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding		3169		chr18	TogoVar
GRTP1_chr13_113319163_113369130	113330637	TGTGTGCA others(7): Show TGTGTGCATGGGAGC	T T	intron_variant intron_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0224 a0001c0001t0001g0224	1	288	0.0035	-14	c.563 others(31): Show c.563-4560_563-4547delGCTCCCATGCACAC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	5/7			chr13	TogoVar
GRXCR1_chr4_42887713_43035658	42903308	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0284 a0001c0001t0010g0284	1	338	0.0030	-14	c.384 others(31): Show c.384+9673_384+9686delTTTTTTTTTTTTTT	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	42932609	TATATATA others(7): Show TATATATATATAGAG	T T	intron_variant intron_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0133 a0001c0001t0004g0133	1	338	0.0030	-14	c.385 others(33): Show c.385-30281_385-30268delTATATATATAGAGA	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	42932611	TATATATA others(7): Show TATATATATAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01515.hp1 NA19240.hp1 HG01515.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0052 a0001c0001t0002g0081 a0001c0001t0002g0052 a0001c0001t0002g0081	2	338	0.0059	-14	c.385 others(33): Show c.385-30279_385-30266delTATATATAGAGAGA	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	42932613	TATATATA others(7): Show TATATATAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0327 a0003c0003t0002g0327	1	338	0.0030	-14	c.385 others(33): Show c.385-30277_385-30264delTATATAGAGAGAGA	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	42932615	TATATAGA others(7): Show TATATAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02280.hp2 HG03486.hp2 HG01952.hp1 HG02280.hp2 HG03486.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0004 a0002c0002t0001 a0001c0001t0003 a0001c0001t0004 a0002c0002t0001	a0001c0001t0003g0140 a0001c0001t0004g0139 a0002c0002t0001g0267 a0001c0001t0003g0140 a0001c0001t0004g0139 a0002c0002t0001g0267	3	338	0.0089	-14	c.385 others(33): Show c.385-30275_385-30262delTATAGAGAGAGAGA	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	42932617	TATAGAGA others(7): Show TATAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0203 a0001c0001t0003g0203	1	338	0.0030	-14	c.385 others(33): Show c.385-30273_385-30260delTAGAGAGAGAGAGA	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	42932619	TAGAGAGA others(7): Show TAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03453.hp2 NA18906.hp2 others(2): Show HG02723.hp1 HG03453.hp2 NA18906.hp2 NA19077.hp2 NA19085.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0003c0003t0001	a0001c0001t0001g0096 a0001c0001t0002g0021 a0001c0001t0003g0130 others(2): Show a0001c0001t0001g0096 a0001c0001t0002g0021 a0001c0001t0003g0130 a0001c0001t0004g0166 a0003c0003t0001g0337	5	338	0.0148	-14	c.385 others(33): Show c.385-30240_385-30227delAGAGAGAGAGAGAG	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	42990173	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0182 a0001c0001t0003g0182	1	338	0.0030	-14	c.627 others(33): Show c.627+27062_627+27075delTTTTTTTTTTTTTT	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRXCR1_chr4_42887713_43035658	43006266	TTGAAAAA others(7): Show TTGAAAAAAGAACAG	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0330 a0003c0003t0001g0330	1	338	0.0030	-14	c.628 others(33): Show c.628-14087_628-14074delTGAAAAAAGAACAG	GRXCR1	ENSG00000215203.3	transcript	ENST00000399770.3	protein_coding	2/3			chr4	TogoVar
GSAP_chr7_77305751_77421349	77307103	AGCATTGC others(7): Show AGCATTGCTGGTCTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00323.hp2 others(17): Show HG00280.hp1 HG00280.hp2 HG00323.hp2 HG01123.hp2 HG01167.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp2 HG02015.hp2 HG02683.hp1 HG03669.hp1 HG03704.hp1 HG03834.hp1 NA18963.hp1 NA19003.hp1 NA19076.hp1 NA19085.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0001 a0002c0003t0001 a0001c0001t0001 a0001c0002t0001 a0002c0003t0001	a0001c0001t0001g0035 a0001c0001t0001g0042 a0001c0001t0001g0072 others(16): Show a0001c0001t0001g0035 a0001c0001t0001g0042 a0001c0001t0001g0072 a0001c0001t0001g0196 a0001c0002t0001g0276 a0002c0003t0001g0004 a0002c0003t0001g0018 a0002c0003t0001g0020 a0002c0003t0001g0029 a0002c0003t0001g0079 a0002c0003t0001g0102 a0002c0003t0001g0103 a0002c0003t0001g0104 a0002c0003t0001g0148 a0002c0003t0001g0156 a0002c0003t0001g0246 a0002c0003t0001g0247 a0002c0003t0001g0286 a0002c0003t0001g0336	20	352	0.0568	-14	c.42 others(25): Show c.4241_*4254delCAGACCAGCAATGC	GSAP	ENSG00000186088.16	transcript	ENST00000257626.12	protein_coding		3647		chr7	TogoVar
GSAP_chr7_77305751_77421349	77390946	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0012 a0012	a0012c0022 a0012c0022	a0012c0022t0001 a0012c0022t0001	a0012c0022t0001g0130 a0012c0022t0001g0130	1	352	0.0028	-14	c.368 others(31): Show c.368-3512_368-3499delTTTTTTTTTTTTTT	GSAP	ENSG00000186088.16	transcript	ENST00000257626.12	protein_coding	5/30			chr7	TogoVar
GSDMD_chr8_143553346_143568062	143563895	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0004 a0003c0006t0001g0004	1	417	0.0024	-14	c.99 others(24): Show c.992_*1005delTTTTTTTTTTTTTT	GSDMD	ENSG00000104518.11	transcript	ENST00000262580.9	protein_coding		834		chr8	TogoVar

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