Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
APAF1_chr12_98640290_98740433	98647949	TTGAGCTA others(7): Show TTGAGCTACCACACC	T T	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0323 a0001c0001t0002g0323	1	366	0.0027	-14	c.-41 others(29): Show c.-41-366_-41-353delGCTACCACACCTGA	APAF1	ENSG00000120868.14	transcript	ENST00000551964.6	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
APAF1_chr12_98640290_98740433	98653656	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0321 a0001c0001t0021g0321	1	366	0.0027	-14	c.526 others(31): Show c.526+3995_526+4008delAAAAAAAAAAAAAA	APAF1	ENSG00000120868.14	transcript	ENST00000551964.6	protein_coding	4/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
APAF1_chr12_98640290_98740433	98689435	TGAGAGAG others(7): Show TGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02258.hp2 HG02572.hp1 others(3): Show HG01081.hp1 HG02258.hp2 HG02572.hp1 HG02818.hp1 HG02895.hp1 HG03579.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0005 a0001c0001 a0001c0004 a0003c0005	a0001c0001t0036 a0001c0001t0037 a0001c0004t0007 others(1): Show a0001c0001t0036 a0001c0001t0037 a0001c0004t0007 a0003c0005t0007	a0001c0001t0036g0300 a0001c0001t0037g0299 a0001c0004t0007g0225 others(3): Show a0001c0001t0036g0300 a0001c0001t0037g0299 a0001c0004t0007g0225 a0001c0004t0007g0226 a0003c0005t0007g0219 a0003c0005t0007g0220	6	366	0.0164	-14	c.230 others(33): Show c.2304+2578_2304+2591delAGAGAGAGAGAGAG	APAF1	ENSG00000120868.14	transcript	ENST00000551964.6	protein_coding	16/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
APAF1_chr12_98640290_98740433	98715235	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00621.hp1 HG00738.hp2 others(25): Show HG00544.hp2 HG00621.hp1 HG00738.hp2 HG02004.hp1 HG02056.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02523.hp1 HG03017.hp2 HG03491.hp2 HG03927.hp1 HG04228.hp2 NA18954.hp1 NA18961.hp2 NA18973.hp1 NA18975.hp1 NA18984.hp2 NA18993.hp2 NA18994.hp1 NA19007.hp2 NA19012.hp1 NA19056.hp2 NA19058.hp1 NA19064.hp1 NA19074.hp1 NA19085.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0010	a0001c0001t0001g0001 a0001c0001t0001g0033 a0001c0001t0001g0034 others(24): Show a0001c0001t0001g0001 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0067 a0001c0001t0001g0077 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0107 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0120 a0001c0001t0001g0229 a0001c0001t0001g0270 a0001c0001t0002g0323 a0001c0001t0005g0080 a0001c0001t0005g0086 a0001c0001t0005g0087 a0001c0001t0005g0095 a0001c0001t0005g0109 a0001c0001t0010g0291	28	366	0.0765	-14	c.295 others(31): Show c.2959-159_2959-146delATATATATATATAT	APAF1	ENSG00000120868.14	transcript	ENST00000551964.6	protein_coding	21/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
APBA1_chr9_69422532_69677371	69444933	TCTCTCTA others(7): Show TCTCTCTAATCACAC	T T	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18946.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0166	1	210	0.0048	-14	c.218 others(33): Show c.2182-3832_2182-3819delGTGTGATTAGAGAG	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	10/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69501627	AAAACACA others(7): Show AAAACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0064	1	210	0.0048	-14	c.120 others(35): Show c.1200+14370_1200+14383delGTGTGTGTGTGTTT	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	2/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69501629	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG01099.hp2 others(29): Show HG00642.hp1 HG00642.hp2 HG01099.hp2 HG01358.hp2 HG01433.hp1 HG01515.hp1 HG01884.hp1 HG01978.hp1 HG02109.hp2 HG02132.hp1 HG02257.hp2 HG02486.hp2 HG02717.hp2 HG02723.hp1 HG02809.hp2 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03195.hp1 HG03225.hp2 HG03471.hp2 HG03492.hp1 HG03834.hp1 HG04199.hp2 NA18979.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 others(14): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0015 a0001c0001t0021 a0001c0001t0022 a0001c0001t0028 a0001c0001t0032 a0001c0005t0006 a0002c0002t0003 a0002c0002t0007 a0002c0002t0009 a0002c0002t0018 a0002c0002t0019 a0002c0002t0023	a0001c0001t0005g0150 a0001c0001t0005g0161 a0001c0001t0005g0175 others(29): Show a0001c0001t0005g0150 a0001c0001t0005g0161 a0001c0001t0005g0175 a0001c0001t0005g0176 a0001c0001t0006g0088 a0001c0001t0006g0134 a0001c0001t0006g0160 a0001c0001t0006g0169 a0001c0001t0006g0204 a0001c0001t0007g0108 a0001c0001t0008g0071 a0001c0001t0008g0072 a0001c0001t0011g0178 a0001c0001t0015g0020 a0001c0001t0015g0054 a0001c0001t0021g0156 a0001c0001t0022g0182 a0001c0001t0028g0117 a0001c0001t0032g0061 a0001c0005t0006g0123 a0002c0002t0003g0013 a0002c0002t0003g0014 a0002c0002t0003g0015 a0002c0002t0007g0008 a0002c0002t0007g0035 a0002c0002t0009g0001 a0002c0002t0009g0003 a0002c0002t0009g0004 a0002c0002t0009g0005 a0002c0002t0018g0002 a0002c0002t0019g0033 a0002c0002t0023g0011	32	210	0.1524	-14	c.120 others(35): Show c.1200+14368_1200+14381delGTGTGTGTGTGTGT	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	2/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69523483	ATATATAT others(7): Show ATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02809.hp1 HG02922.hp2 others(6): Show HG02257.hp2 HG02809.hp1 HG02922.hp2 HG03130.hp2 HG03195.hp1 HG04199.hp2 NA18906.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0002c0002t0009	a0001c0001t0002g0079 a0001c0001t0005g0056 a0001c0001t0006g0134 others(6): Show a0001c0001t0002g0079 a0001c0001t0005g0056 a0001c0001t0006g0134 a0001c0001t0008g0069 a0001c0001t0008g0070 a0001c0001t0008g0072 a0001c0001t0008g0073 a0002c0002t0009g0001 a0002c0002t0009g0003	9	210	0.0429	-14	c.-69 others(31): Show c.-69-6218_-69-6205delCATATATATATATA	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	1/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69569448	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02895.hp2 HG02897.hp1 HG02109.hp2 HG02895.hp2 HG02897.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0013 a0002c0002t0003g0014 a0002c0002t0003g0015 a0002c0002t0003g0013 a0002c0002t0003g0014 a0002c0002t0003g0015	3	210	0.0143	-14	c.-69 others(33): Show c.-69-52183_-69-52170delACACACACACACAC	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	1/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69606479	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0051 a0001c0001t0007g0051	1	210	0.0048	-14	c.-70 others(33): Show c.-70+65660_-70+65673delAAAAAAAAAAAAAA	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	1/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69636826	AGAGAGGG others(7): Show AGAGAGGGAGGGAGG	A A	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01358.hp2 HG01361.hp2 others(5): Show HG01074.hp1 HG01358.hp2 HG01361.hp2 HG02258.hp2 HG02300.hp2 HG02451.hp1 HG02723.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0037 a0002c0002t0002 a0002c0002t0023	a0001c0001t0001g0064 a0001c0001t0004g0059 a0001c0001t0004g0060 others(5): Show a0001c0001t0001g0064 a0001c0001t0004g0059 a0001c0001t0004g0060 a0001c0001t0004g0062 a0001c0001t0005g0161 a0001c0001t0037g0210 a0002c0002t0002g0023 a0002c0002t0023g0011	8	210	0.0381	-14	c.-70 others(33): Show c.-70+35313_-70+35326delCCTCCCTCCCTCTC	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	1/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69658270	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0013 a0002c0002t0003g0013	1	210	0.0048	-14	c.-70 others(33): Show c.-70+13869_-70+13882delGAAAGAAAGAAAGA	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	1/12			chr9	TogoVar
APBA1_chr9_69422532_69677371	69658306	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	NA18982.hp2 NA18982.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0136 a0002c0002t0003g0136	1	210	0.0048	-14	c.-70 others(33): Show c.-70+13833_-70+13846delAAGAAAGAAAGAAA	APBA1	ENSG00000107282.9	transcript	ENST00000265381.7	protein_coding	1/12			chr9	TogoVar
APBA2_chr15_28880974_29123315	28955610	GTAATTAA others(7): Show GTAATTAAGAGGGTC	G G	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0015 a0002c0002t0015	a0002c0002t0015g0084 a0002c0002t0015g0084	1	204	0.0049	-14	c.-95 others(33): Show c.-95+33865_-95+33878delTTAAGAGGGTCTAA	APBA2	ENSG00000034053.15	transcript	ENST00000683413.1	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr15	TogoVar
APBA2_chr15_28880974_29123315	29039098	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02615.hp2 HG02647.hp2 others(1): Show HG00639.hp1 HG02615.hp2 HG02647.hp2 HG03139.hp1	a0002 a0002	a0002c0002 a0002c0004 a0002c0002 a0002c0004	a0002c0002t0004 a0002c0002t0008 a0002c0002t0011 others(1): Show a0002c0002t0004 a0002c0002t0008 a0002c0002t0011 a0002c0004t0009	a0002c0002t0004g0086 a0002c0002t0008g0125 a0002c0002t0011g0102 others(1): Show a0002c0002t0004g0086 a0002c0002t0008g0125 a0002c0002t0011g0102 a0002c0004t0009g0121	4	204	0.0196	-14	c.-40 others(33): Show c.-40-14702_-40-14689delGTGTGTGTGTGTGT	APBA2	ENSG00000034053.15	transcript	ENST00000683413.1	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr15	TogoVar
APBA2_chr15_28880974_29123315	29055668	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02083.hp1 NA18964.hp2 HG00597.hp1 HG02083.hp1 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0168 a0001c0001t0003g0169 a0001c0001t0004g0018 a0001c0001t0003g0168 a0001c0001t0003g0169 a0001c0001t0004g0018	3	204	0.0147	-14	c.951 others(29): Show c.951+864_951+877delGTGTGTGTGTGTGT	APBA2	ENSG00000034053.15	transcript	ENST00000683413.1	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr15	TogoVar
APBB1_chr11_6390125_6424094	6392486	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG01433.hp1 others(7): Show HG00639.hp1 HG00642.hp1 HG01433.hp1 HG02109.hp2 HG02451.hp2 HG02615.hp2 HG02818.hp2 HG02922.hp2 HG03098.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0095 a0001c0001t0001g0096 others(7): Show a0001c0001t0001g0044 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0244 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0284 a0001c0001t0001g0334 a0001c0001t0001g0336 a0001c0001t0001g0337	10	416	0.0240	-14	c.30 others(25): Show c.3034_*3047delAAAAAAAAAAAAAA	APBB1	ENSG00000166313.20	transcript	ENST00000609360.6	protein_coding		2638		chr11	TogoVar
APBB1_chr11_6390125_6424094	6408149	ATCTGATC others(7): Show ATCTGATCAAGGCTC	A A	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0124	1	416	0.0024	-14	c.721 others(31): Show c.721+2464_721+2477delGAGCCTTGATCAGA	APBB1	ENSG00000166313.20	transcript	ENST00000609360.6	protein_coding	2/14			chr11	TogoVar
APBB2_chr4_40805027_41219542	40819176	CTTTTTTT others(7): Show CTTTTTTTTTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00597.hp1 others(26): Show HG00140.hp2 HG00280.hp2 HG00597.hp1 HG01169.hp2 HG01192.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01516.hp2 HG01993.hp1 HG02257.hp2 HG02258.hp2 HG02622.hp1 HG02647.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02897.hp2 HG02922.hp1 HG03098.hp2 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG06807.hp1 NA18747.hp1 NA18944.hp2 NA19030.hp1 NA19030.hp2 NA19087.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0004 others(3): Show a0001c0002 a0001c0003 a0001c0004 a0002c0001 a0002c0005 a0002c0008	a0001c0002t0003 a0001c0002t0010 a0001c0003t0003 others(14): Show a0001c0002t0003 a0001c0002t0010 a0001c0003t0003 a0001c0003t0006 a0001c0003t0010 a0001c0003t0035 a0001c0004t0003 a0001c0004t0006 a0001c0004t0020 a0001c0004t0052 a0002c0001t0003 a0002c0001t0006 a0002c0001t0010 a0002c0001t0050 a0002c0005t0006 a0002c0005t0028 a0002c0008t0046	a0001c0002t0003g0033 a0001c0002t0003g0034 a0001c0002t0003g0174 others(26): Show a0001c0002t0003g0033 a0001c0002t0003g0034 a0001c0002t0003g0174 a0001c0002t0003g0183 a0001c0002t0010g0006 a0001c0003t0003g0136 a0001c0003t0003g0138 a0001c0003t0006g0134 a0001c0003t0010g0007 a0001c0003t0035g0026 a0001c0004t0003g0043 a0001c0004t0003g0103 a0001c0004t0003g0111 a0001c0004t0006g0160 a0001c0004t0020g0036 a0001c0004t0052g0093 a0002c0001t0003g0027 a0002c0001t0003g0048 a0002c0001t0003g0123 a0002c0001t0003g0147 a0002c0001t0003g0151 a0002c0001t0006g0115 a0002c0001t0006g0146 a0002c0001t0006g0168 a0002c0001t0010g0025 a0002c0001t0050g0188 a0002c0005t0006g0187 a0002c0005t0028g0012 a0002c0008t0046g0090	29	192	0.1510	-14	c.211 others(33): Show c.2112+2681_2112+2694delAGAAAAAAAAAAAA	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	17/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40907345	TTACATAT others(7): Show TTACATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00558.hp2 HG00735.hp2 others(18): Show HG00438.hp1 HG00558.hp2 HG00735.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01361.hp2 HG01516.hp1 HG01517.hp1 HG02004.hp1 HG02015.hp2 HG02165.hp1 HG02738.hp1 HG03491.hp2 HG03492.hp2 NA18951.hp1 NA18983.hp1 NA19065.hp2 NA19066.hp2 NA19087.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0004 others(1): Show a0001c0002 a0001c0003 a0001c0004 a0002c0001	a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 others(12): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0006 a0001c0002t0007 a0001c0002t0017 a0001c0002t0043 a0001c0002t0049 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0004t0002 a0001c0004t0003 a0001c0004t0021 a0002c0001t0004	a0001c0002t0001g0060 a0001c0002t0001g0070 a0001c0002t0001g0099 others(18): Show a0001c0002t0001g0060 a0001c0002t0001g0070 a0001c0002t0001g0099 a0001c0002t0002g0086 a0001c0002t0002g0175 a0001c0002t0004g0108 a0001c0002t0006g0058 a0001c0002t0007g0171 a0001c0002t0007g0172 a0001c0002t0017g0094 a0001c0002t0017g0095 a0001c0002t0043g0169 a0001c0002t0049g0097 a0001c0003t0001g0038 a0001c0003t0001g0185 a0001c0003t0002g0072 a0001c0003t0003g0136 a0001c0004t0002g0192 a0001c0004t0003g0111 a0001c0004t0021g0092 a0002c0001t0004g0102	21	192	0.1094	-14	c.125 others(35): Show c.1255-13948_1255-13935delTATATATATATGTA	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	10/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40907369	ATATATAT others(7): Show ATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00558.hp1 HG01099.hp1 others(10): Show HG00544.hp2 HG00558.hp1 HG01099.hp1 HG03490.hp2 HG03710.hp1 HG04204.hp1 NA18747.hp1 NA18944.hp1 NA18955.hp2 NA18993.hp2 NA18999.hp1 NA19056.hp2 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0004 a0002c0001 others(1): Show a0001c0002 a0001c0004 a0002c0001 a0004c0007	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(8): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0011 a0001c0002t0017 a0001c0002t0038 a0001c0004t0002 a0002c0001t0001 a0002c0001t0013 a0002c0001t0045 a0004c0007t0007	a0001c0002t0001g0109 a0001c0002t0002g0061 a0001c0002t0002g0071 others(10): Show a0001c0002t0001g0109 a0001c0002t0002g0061 a0001c0002t0002g0071 a0001c0002t0003g0183 a0001c0002t0011g0009 a0001c0002t0017g0120 a0001c0002t0038g0051 a0001c0004t0002g0112 a0002c0001t0001g0107 a0002c0001t0001g0135 a0002c0001t0013g0023 a0002c0001t0045g0040 a0004c0007t0007g0056	13	192	0.0677	-14	c.125 others(35): Show c.1255-13972_1255-13959delAAAATATATATATA	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	10/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40907371	ATATATAT others(7): Show ATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01099.hp2 HG01891.hp1 others(2): Show HG00733.hp2 HG01099.hp2 HG01891.hp1 HG02109.hp2 HG02698.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0019 a0001c0003t0011 a0002c0001t0001 others(1): Show a0001c0002t0019 a0001c0003t0011 a0002c0001t0001 a0002c0001t0036	a0001c0002t0019g0178 a0001c0003t0011g0015 a0001c0003t0011g0016 others(2): Show a0001c0002t0019g0178 a0001c0003t0011g0015 a0001c0003t0011g0016 a0002c0001t0001g0166 a0002c0001t0036g0113	5	192	0.0260	-14	c.125 others(35): Show c.1255-13974_1255-13961delAAAAAATATATATA	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	10/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40907373	ATATATAT others(7): Show ATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02970.hp2 HG02965.hp1 HG02970.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0001 a0002c0001t0005 a0001c0003t0001 a0002c0001t0005	a0001c0003t0001g0159 a0002c0001t0005g0152 a0001c0003t0001g0159 a0002c0001t0005g0152	2	192	0.0104	-14	c.125 others(35): Show c.1255-13976_1255-13963delAAAAAAAATATATA	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	10/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40907375	ATATATTT others(7): Show ATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02647.hp2 NA18522.hp2 HG02647.hp2 NA18522.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0029 a0002c0001t0003 a0002c0001t0029	a0002c0001t0003g0123 a0002c0001t0029g0002 a0002c0001t0003g0123 a0002c0001t0029g0002	2	192	0.0104	-14	c.125 others(35): Show c.1255-13978_1255-13965delAAAAAAAAAATATA	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	10/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40930440	TGTGTGTG others(7): Show TGTGTGTGTGCGCGC	T T	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03130.hp2 NA18522.hp1 others(1): Show HG02647.hp2 HG03130.hp2 NA18522.hp1 NA18522.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0003 a0002c0001t0029 others(1): Show a0002c0001t0001 a0002c0001t0003 a0002c0001t0029 a0002c0001t0057	a0002c0001t0001g0075 a0002c0001t0003g0123 a0002c0001t0029g0002 others(1): Show a0002c0001t0001g0075 a0002c0001t0003g0123 a0002c0001t0029g0002 a0002c0001t0057g0074	4	192	0.0208	-14	c.125 others(33): Show c.1254+4002_1254+4015delGCGCGCACACACAC	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	10/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40930460	CGCGCGCG others(7): Show CGCGCGCGTGCGCGT	C C	intron_variant intron_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0110 a0001c0002t0001g0110	1	192	0.0052	-14	c.125 others(33): Show c.1254+3982_1254+3995delACGCGCACGCGCGC	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	10/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	40961667	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0025 a0002c0001t0025	a0002c0001t0025g0020 a0002c0001t0025g0020	1	192	0.0052	-14	c.836 others(33): Show c.836-16608_836-16595delTTTTTTTTTTTTTT	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	6/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	41000059	ATATGTGT others(7): Show ATATGTGTGTATGTG	A A	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG03704.hp2 HG01069.hp1 HG01071.hp1 HG03704.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0018 a0001c0002t0034 a0001c0002t0018 a0001c0002t0034	a0001c0002t0018g0003 a0001c0002t0018g0005 a0001c0002t0034g0004 a0001c0002t0018g0003 a0001c0002t0018g0005 a0001c0002t0034g0004	3	192	0.0156	-14	c.835 others(33): Show c.835+13510_835+13523delCACATACACACATA	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	6/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	41027364	CATATATA others(7): Show CATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02622.hp2 HG03098.hp1 others(3): Show HG01255.hp2 HG02622.hp2 HG03098.hp1 HG03516.hp1 NA19030.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0001 a0001c0004 a0002c0001	a0001c0004t0004 a0001c0004t0005 a0001c0004t0006 others(3): Show a0001c0004t0004 a0001c0004t0005 a0001c0004t0006 a0001c0004t0051 a0002c0001t0001 a0002c0001t0008	a0001c0004t0004g0144 a0001c0004t0005g0163 a0001c0004t0006g0160 others(3): Show a0001c0004t0004g0144 a0001c0004t0005g0163 a0001c0004t0006g0160 a0001c0004t0051g0141 a0002c0001t0001g0148 a0002c0001t0008g0156	6	192	0.0313	-14	c.19+ others(29): Show c.19+5858_19+5871delATATATATATATAT	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding	5/17			chr4	TogoVar
APBB2_chr4_40805027_41219542	41216419	CGGGGGGG others(7): Show CGGGGGGGGGGGGGG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00733.hp1 others(39): Show HG00140.hp2 HG00280.hp2 HG00733.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp1 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01169.hp1 HG01255.hp1 HG01258.hp1 HG01346.hp2 HG01516.hp1 HG01517.hp1 HG01891.hp1 HG01891.hp2 HG02109.hp2 HG02486.hp1 HG02698.hp1 HG02738.hp2 HG02818.hp2 HG02922.hp1 HG02970.hp1 HG03195.hp1 HG03471.hp1 HG03471.hp2 HG03579.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG04204.hp2 NA18522.hp2 NA18747.hp1 NA18944.hp2 NA18960.hp1 NA18960.hp2 NA18993.hp1 NA18993.hp2 NA18999.hp2 NA19056.hp1 NA19065.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0004 others(3): Show a0001c0002 a0001c0003 a0001c0004 a0002c0001 a0002c0005 a0002c0009	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(33): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0007 a0001c0002t0010 a0001c0002t0011 a0001c0002t0018 a0001c0002t0019 a0001c0002t0034 a0001c0003t0010 a0001c0003t0011 a0001c0003t0012 a0001c0003t0013 a0001c0003t0026 a0001c0003t0030 a0001c0003t0032 a0001c0003t0035 a0001c0004t0001 a0001c0004t0012 a0001c0004t0013 a0001c0004t0039 a0002c0001t0001 a0002c0001t0004 a0002c0001t0007 a0002c0001t0010 a0002c0001t0013 a0002c0001t0024 a0002c0001t0025 a0002c0001t0027 a0002c0001t0029 a0002c0001t0031 a0002c0001t0033 a0002c0005t0008 a0002c0005t0028 a0002c0009t0059	a0001c0002t0001g0173 a0001c0002t0001g0179 a0001c0002t0002g0175 others(39): Show a0001c0002t0001g0173 a0001c0002t0001g0179 a0001c0002t0002g0175 a0001c0002t0003g0174 a0001c0002t0003g0183 a0001c0002t0004g0170 a0001c0002t0007g0171 a0001c0002t0007g0172 a0001c0002t0010g0006 a0001c0002t0011g0009 a0001c0002t0018g0003 a0001c0002t0018g0005 a0001c0002t0019g0178 a0001c0002t0034g0004 a0001c0003t0010g0007 a0001c0003t0011g0015 a0001c0003t0011g0016 a0001c0003t0012g0010 a0001c0003t0012g0011 a0001c0003t0013g0024 a0001c0003t0026g0019 a0001c0003t0030g0021 a0001c0003t0032g0008 a0001c0003t0035g0026 a0001c0004t0001g0181 a0001c0004t0012g0001 a0001c0004t0013g0022 a0001c0004t0039g0180 a0002c0001t0001g0135 a0002c0001t0004g0191 a0002c0001t0007g0177 a0002c0001t0010g0025 a0002c0001t0013g0023 a0002c0001t0024g0013 a0002c0001t0025g0020 a0002c0001t0027g0018 a0002c0001t0029g0002 a0002c0001t0031g0017 a0002c0001t0033g0014 a0002c0005t0008g0176 a0002c0005t0028g0012 a0002c0009t0059g0182	42	192	0.2188	-14	c.-24 others(25): Show c.-2445_-2432delCCCCCCCCCCCCCC	APBB2	ENSG00000163697.18	transcript	ENST00000508593.6	protein_coding		1878		chr4	TogoVar
APELA_chr4_164872178_164902527	164884107	AAGAAAGA others(7): Show AAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02027.hp2 HG02922.hp2 others(10): Show HG01261.hp2 HG02027.hp2 HG02922.hp2 HG03130.hp2 HG03486.hp1 NA18953.hp1 NA18957.hp2 NA19003.hp1 NA19005.hp2 NA19057.hp1 NA19065.hp2 NA19075.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0015	a0001c0001t0001g0108 a0001c0001t0001g0119 a0001c0001t0002g0006 others(6): Show a0001c0001t0001g0108 a0001c0001t0001g0119 a0001c0001t0002g0006 a0001c0001t0002g0113 a0001c0001t0002g0231 a0001c0001t0003g0099 a0001c0001t0003g0111 a0001c0001t0003g0121 a0001c0001t0015g0120	13	434	0.0300	-14	c.1+ others(29): Show c.1+5114_*1+5127delGAAAGAAAGAAAGA	APELA	ENSG00000248329.6	transcript	ENST00000507152.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
APELA_chr4_164872178_164902527	164899627	GGAGGGAG others(7): Show GGAGGGAGAGAGAGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02723.hp1 HG02895.hp1 HG02897.hp1 others(1): Show HG02723.hp1 HG02895.hp1 HG02897.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0050 a0001c0001t0006g0284 a0001c0001t0006g0285 a0001c0001t0006g0050 a0001c0001t0006g0284 a0001c0001t0006g0285	4	434	0.0092	-14	c.42 others(25): Show c.4214_*4227delGAGGGAGAGAGAGA	APELA	ENSG00000248329.6	transcript	ENST00000507152.6	protein_coding		2101		chr4	TogoVar
APELA_chr4_164872178_164902527	164899631	GGAGAGAG others(7): Show GGAGAGAGAGAGAGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01975.hp2 HG01975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0267 a0001c0001t0001g0267	1	434	0.0023	-14	c.42 others(25): Show c.4218_*4231delGAGAGAGAGAGAGA	APELA	ENSG00000248329.6	transcript	ENST00000507152.6	protein_coding		2105		chr4	TogoVar
APELA_chr4_164872178_164902527	164899658	GAGAGAGA others(7): Show GAGAGAGAGAGAGAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG02004.hp2 HG02145.hp1 others(1): Show HG00140.hp1 HG02004.hp2 HG02145.hp1 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0054 a0001c0001t0002g0107 a0001c0001t0002g0297 a0001c0001t0002g0054 a0001c0001t0002g0107 a0001c0001t0002g0297	4	434	0.0092	-14	c.42 others(25): Show c.4245_*4258delAGAGAGAGAGAGAA	APELA	ENSG00000248329.6	transcript	ENST00000507152.6	protein_coding		2132		chr4	TogoVar
APELA_chr4_164872178_164902527	164899708	AAGAAAGA others(7): Show AAGAAAGAAAGAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00733.hp2 HG01069.hp1 others(28): Show HG00280.hp2 HG00733.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01358.hp2 HG01975.hp1 HG01981.hp1 HG01981.hp2 HG02698.hp2 HG03490.hp1 HG03492.hp2 HG03654.hp1 HG03704.hp2 HG03834.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18948.hp2 NA18949.hp2 NA18965.hp1 NA19062.hp2 NA19074.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0014 a0001c0001t0018 others(2): Show a0001c0001t0001 a0001c0001t0014 a0001c0001t0018 a0001c0001t0019 a0001c0002t0001	a0001c0001t0001g0026 a0001c0001t0001g0051 a0001c0001t0001g0091 others(26): Show a0001c0001t0001g0026 a0001c0001t0001g0051 a0001c0001t0001g0091 a0001c0001t0001g0213 a0001c0001t0001g0243 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0269 a0001c0001t0001g0278 a0001c0001t0001g0282 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0301 a0001c0001t0001g0303 a0001c0001t0001g0305 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0014g0026 a0001c0001t0014g0291 a0001c0001t0018g0055 a0001c0001t0019g0288 a0001c0002t0001g0158	31	434	0.0714	-14	c.42 others(25): Show c.4295_*4308delAGAAAGAAAGAAAG	APELA	ENSG00000248329.6	transcript	ENST00000507152.6	protein_coding		2182		chr4	TogoVar
APH1B_chr15_63272605_63314126	63303874	AACACACA others(7): Show AACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02735.hp2 HG00558.hp2 HG02735.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0002c0002t0002 a0001c0001t0005 a0002c0002t0002	a0001c0001t0005g0237 a0002c0002t0002g0132 a0001c0001t0005g0237 a0002c0002t0002g0132	2	422	0.0047	-14	c.606 others(31): Show c.606+1423_606+1436delACACACACACACAC	APH1B	ENSG00000138613.14	transcript	ENST00000261879.10	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr15	TogoVar
APLF_chr2_68462585_68585162	68480301	CCTTTTTT others(7): Show CCTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03225.hp2 NA18522.hp2 HG03225.hp2 NA18522.hp2	a0002 a0011 a0002 a0011	a0002c0002 a0011c0015 a0002c0002 a0011c0015	a0002c0002t0012 a0011c0015t0013 a0002c0002t0012 a0011c0015t0013	a0002c0002t0012g0021 a0011c0015t0013g0165 a0002c0002t0012g0021 a0011c0015t0013g0165	2	176	0.0114	-14	c.97- others(29): Show c.97-9888_97-9875delCTTTTTTTTTTTTT	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	1/9			chr2	TogoVar
APLF_chr2_68462585_68585162	68516929	AATATATA others(7): Show AATATATAATATAAT	A A	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG03098.hp1 HG03195.hp1 others(4): Show HG00741.hp1 HG03098.hp1 HG03195.hp1 HG03486.hp1 HG03486.hp2 HG03834.hp1 NA19240.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0006c0013 a0001c0001 a0006c0007 a0006c0013	a0001c0001t0001 a0006c0007t0006 a0006c0007t0017 others(1): Show a0001c0001t0001 a0006c0007t0006 a0006c0007t0017 a0006c0013t0016	a0001c0001t0001g0070 a0001c0001t0001g0109 a0006c0007t0006g0002 others(3): Show a0001c0001t0001g0070 a0001c0001t0001g0109 a0006c0007t0006g0002 a0006c0007t0006g0032 a0006c0007t0017g0022 a0006c0013t0016g0166	7	176	0.0398	-14	c.622 others(31): Show c.622+3269_622+3282delTAATATAATATATA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APOA1_chr11_116830751_116842622	116831191	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp2 HG01071.hp2 HG02602.hp2 others(4): Show HG01069.hp2 HG01071.hp2 HG02602.hp2 HG03490.hp2 HG03492.hp1 HG03688.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0003 a0001c0001t0001g0005	7	448	0.0156	-14	c.46 others(25): Show c.4603_*4616delGAAAGAAAGAAAGA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4559		chr11	TogoVar
APOA1_chr11_116830751_116842622	116831197	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp1 HG03130.hp1 HG03516.hp1 HG02717.hp1 HG03130.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0003 a0001c0001t0001g0004	3	448	0.0067	-14	c.45 others(25): Show c.4597_*4610delAAGAAAGAAAGAAA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4553		chr11	TogoVar
APOA1_chr11_116830751_116842622	116831271	CTTTCTTT others(7): Show CTTTCTTTCTTTCCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18974.hp1 NA19059.hp1 NA18974.hp1 NA19059.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0006 a0002c0002t0001g0006	2	448	0.0045	-14	c.45 others(25): Show c.4523_*4536delAGGAAAGAAAGAAA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4479		chr11	TogoVar
APOBEC1_chr12_7644400_7670908	7648337	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01516.hp2 HG01517.hp2 HG03927.hp1 HG01516.hp2 HG01517.hp2 HG03927.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0280 a0003c0004t0001g0311 a0003c0004t0001g0312 a0003c0004t0001g0280 a0003c0004t0001g0311 a0003c0004t0001g0312	3	432	0.0069	-14	c.11 others(25): Show c.1196_*1209delTTTTTTTTTTTTTT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding		1062		chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7657043	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 NA18949.hp2 HG02723.hp2 NA18949.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0195 a0001c0003t0001g0109 a0001c0002t0001g0195 a0001c0003t0001g0109	2	432	0.0046	-14	c.17- others(29): Show c.17-2425_17-2412delACACACACACACAC	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7665752	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00438.hp1 others(40): Show HG00099.hp1 HG00408.hp1 HG00438.hp1 HG00544.hp1 HG00639.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01192.hp1 HG01255.hp1 HG01358.hp1 HG01515.hp2 HG01993.hp1 HG02015.hp2 HG02055.hp1 HG02132.hp2 HG02258.hp1 HG02559.hp1 HG02683.hp1 HG02735.hp1 HG02738.hp1 HG02965.hp1 HG03225.hp2 HG03491.hp2 HG03492.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03710.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 NA18971.hp2 NA18983.hp2 NA18994.hp2 NA18995.hp1 NA19004.hp2 NA19006.hp1 NA19067.hp2 NA19082.hp1 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0036 a0001c0003t0001g0003 a0001c0003t0001g0004 others(34): Show a0001c0002t0001g0036 a0001c0003t0001g0003 a0001c0003t0001g0004 a0001c0003t0001g0005 a0001c0003t0001g0006 a0001c0003t0001g0007 a0001c0003t0001g0008 a0001c0003t0001g0026 a0001c0003t0001g0027 a0001c0003t0001g0028 a0001c0003t0001g0029 a0001c0003t0001g0030 a0001c0003t0001g0031 a0001c0003t0001g0032 a0001c0003t0001g0033 a0001c0003t0001g0034 a0001c0003t0001g0035 a0001c0003t0001g0037 a0001c0003t0001g0038 a0001c0003t0001g0039 a0001c0003t0001g0040 a0001c0003t0001g0041 a0001c0003t0001g0042 a0001c0003t0001g0043 a0001c0003t0001g0044 a0001c0003t0001g0045 a0001c0003t0001g0046 a0001c0003t0001g0047 a0001c0003t0001g0048 a0001c0003t0001g0049 a0001c0003t0001g0050 a0001c0003t0001g0051 a0001c0003t0001g0052 a0001c0003t0001g0053 a0001c0003t0001g0054 a0001c0003t0001g0055 a0001c0003t0001g0056	43	432	0.0995	-14	c.16+ others(26): Show c.16+91_16+104delGTGTGTGTGTGTGT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC3F_chr22_39035864_39060972	39057005	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0004 a0002c0002t0002g0004	1	422	0.0024	-14	c.43 others(25): Show c.4311_*4324delTTTTTTTTTTTTTT	APOBEC3F	ENSG00000128394.17	transcript	ENST00000308521.10	protein_coding		1034		chr22	TogoVar
APOBEC3G_chr22_39072275_39092743	39091418	TCTTGAAC others(7): Show TCTTGAACTTCTAGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0069 a0002c0003t0001g0069	1	424	0.0024	-14	c.39 others(25): Show c.3998_*4011delCTTGAACTTCTAGG	APOBEC3G	ENSG00000239713.9	transcript	ENST00000407997.4	protein_coding		3676		chr22	TogoVar
APOC2_chr19_44941051_44954565	44946191	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03942.hp1 NA19043.hp2 HG03942.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0044 a0001c0001t0003g0043 a0001c0001t0001g0044 a0001c0001t0003g0043	2	398	0.0050	-14	c.-14 others(29): Show c.-14+147_-14+160delTGTGTGTGTGTGTG	APOC2	ENSG00000234906.11	transcript	ENST00000252490.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
APOC3_chr11_116824907_116838072	116831191	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG02602.hp2 others(4): Show HG01069.hp1 HG01071.hp1 HG02602.hp2 HG03490.hp1 HG03492.hp1 HG03688.hp1 NA19011.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0003 a0003c0005t0003 a0001c0001t0001 a0001c0001t0003 a0003c0005t0003	a0001c0001t0001g0030 a0001c0001t0003g0019 a0001c0001t0003g0030 others(1): Show a0001c0001t0001g0030 a0001c0001t0003g0019 a0001c0001t0003g0030 a0003c0005t0003g0019	7	450	0.0156	-14	c.179 others(29): Show c.179+297_179+310delCTTTCTTTCTTTCT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOC3_chr11_116824907_116838072	116831197	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03130.hp1 HG03516.hp1 HG02717.hp2 HG03130.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0068 a0001c0001t0001g0046 a0001c0001t0001g0068	3	450	0.0067	-14	c.179 others(29): Show c.179+303_179+316delTTCTTTCTTTCTTT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOC3_chr11_116824907_116838072	116831271	CTTTCTTT others(7): Show CTTTCTTTCTTTCCT	C C	intron_variant intron_variant	MODIFIER	NA18970.hp2 NA18974.hp1 NA19059.hp1 NA18970.hp2 NA18974.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	3	450	0.0067	-14	c.179 others(29): Show c.179+378_179+391delTCTTTCTTTCCTTT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar

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