Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC88C_chr14_91266323_91422820	91345823	GGTCACCC others(7): Show GGTCACCCAGGAACT	G G	intron_variant intron_variant	MODIFIER	NA19077.hp2 NA19077.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0186 a0001c0007t0001g0186	1	284	0.0035	-14	c.341 others(31): Show c.341-2180_341-2167delAGTTCCTGGGTGAC	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	4/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91415772	TTAAGGCA others(7): Show TTAAGGCAATCTATA	T T	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03209.hp1 HG03225.hp1 others(1): Show HG02717.hp2 HG03209.hp1 HG03225.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0063 a0001c0001 a0001c0063	a0001c0001t0010 a0001c0063t0019 a0001c0001t0010 a0001c0063t0019	a0001c0001t0010g0268 a0001c0001t0010g0269 a0001c0001t0010g0270 others(1): Show a0001c0001t0010g0268 a0001c0001t0010g0269 a0001c0001t0010g0270 a0001c0063t0019g0267	4	284	0.0141	-14	c.161 others(29): Show c.161+952_161+965delTATAGATTGCCTTA	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	2/29			chr14	TogoVar
CCDC8_chr19_46405329_46418564	46414124	TGAGGCCA others(7): Show TGAGGCCAGGAGTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00323.hp1 others(209): Show HG00099.hp2 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01074.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02970.hp1 HG03017.hp1 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03540.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18612.hp2 NA18906.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp2 NA18960.hp2 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA18988.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp2 NA20805.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0005 a0006 a0010 a0012	a0001c0001 a0001c0005 a0002c0002 others(5): Show a0001c0001 a0001c0005 a0002c0002 a0003c0003 a0005c0007 a0006c0006 a0010c0015 a0012c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0001t0014 a0001c0001t0015 a0001c0005t0005 a0002c0002t0001 a0002c0002t0002 a0002c0002t0007 a0002c0002t0012 a0002c0002t0013 a0002c0002t0019 a0002c0002t0024 a0003c0003t0001 a0005c0007t0001 a0006c0006t0002 a0010c0015t0001 a0012c0014t0005	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(17): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0005g0000 a0001c0001t0011g0000 a0001c0001t0014g0000 a0001c0001t0015g0000 a0001c0005t0005g0000 a0002c0002t0001g0000 a0002c0002t0002g0000 a0002c0002t0007g0000 a0002c0002t0012g0000 a0002c0002t0013g0000 a0002c0002t0019g0000 a0002c0002t0024g0000 a0003c0003t0001g0000 a0005c0007t0001g0000 a0006c0006t0002g0000 a0010c0015t0001g0000 a0012c0014t0005g0000	212	456	0.4649	-14	c.-13 others(25): Show c.-1328_-1315delGAACTCCTGGCCTC	CCDC8	ENSG00000169515.9	transcript	ENST00000307522.5	protein_coding		561		chr19	TogoVar
CCDC90B_chr11_83254081_83291367	83254423	CTTTTTTC others(7): Show CTTTTTTCTTTTCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG01175.hp1 HG01243.hp1 others(22): Show HG00544.hp1 HG01175.hp1 HG01243.hp1 HG02015.hp1 HG02071.hp2 HG02132.hp1 HG02132.hp2 HG02451.hp2 HG02486.hp2 HG02647.hp1 HG02683.hp1 HG02809.hp1 HG02886.hp1 HG03239.hp1 HG03688.hp1 NA18947.hp2 NA18955.hp1 NA18973.hp2 NA19001.hp2 NA19002.hp1 NA19005.hp2 NA19011.hp2 NA19074.hp2 NA19088.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0005 a0002c0004t0005 a0002c0004t0021 a0001c0001t0005 a0002c0004t0005 a0002c0004t0021	a0001c0001t0005g0013 a0001c0001t0005g0103 a0002c0004t0005g0006 others(4): Show a0001c0001t0005g0013 a0001c0001t0005g0103 a0002c0004t0005g0006 a0002c0004t0005g0126 a0002c0004t0005g0127 a0002c0004t0005g0128 a0002c0004t0021g0125	25	414	0.0604	-14	c.74 others(25): Show c.7474_*7487delAAGAAAAGAAAAAA	CCDC90B	ENSG00000137500.10	transcript	ENST00000529689.6	protein_coding		4657		chr11	TogoVar
CCDC91_chr12_28185456_28555166	28287506	ATGTGATG others(7): Show ATGTGATGTTGTAGG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0175 a0001c0001t0001g0175	1	242	0.0041	-14	c.110 others(33): Show c.110-18137_110-18124delTGTTGTAGGTGTGA	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28289685	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG01071.hp1 others(32): Show HG00280.hp1 HG00323.hp2 HG01071.hp1 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01361.hp1 HG01515.hp2 HG01517.hp1 HG02132.hp1 HG02280.hp2 HG02683.hp2 HG03491.hp1 HG03492.hp1 HG03831.hp1 NA18948.hp1 NA18956.hp1 NA18957.hp2 NA18968.hp2 NA18969.hp2 NA18973.hp2 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18983.hp2 NA18984.hp2 NA19012.hp1 NA19062.hp2 NA19079.hp2 NA19084.hp1 NA19087.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0003 a0003	a0003c0003 a0003c0008 a0003c0003 a0003c0008	a0003c0003t0001 a0003c0003t0005 a0003c0008t0001 a0003c0003t0001 a0003c0003t0005 a0003c0008t0001	a0003c0003t0001g0208 a0003c0003t0001g0209 a0003c0003t0001g0210 others(32): Show a0003c0003t0001g0208 a0003c0003t0001g0209 a0003c0003t0001g0210 a0003c0003t0001g0211 a0003c0003t0001g0212 a0003c0003t0001g0213 a0003c0003t0001g0214 a0003c0003t0001g0215 a0003c0003t0001g0216 a0003c0003t0001g0217 a0003c0003t0001g0218 a0003c0003t0001g0219 a0003c0003t0001g0220 a0003c0003t0001g0221 a0003c0003t0001g0222 a0003c0003t0001g0223 a0003c0003t0001g0224 a0003c0003t0001g0226 a0003c0003t0001g0227 a0003c0003t0001g0228 a0003c0003t0001g0230 a0003c0003t0001g0231 a0003c0003t0001g0232 a0003c0003t0001g0233 a0003c0003t0001g0234 a0003c0003t0001g0235 a0003c0003t0001g0236 a0003c0003t0001g0237 a0003c0003t0001g0238 a0003c0003t0001g0239 a0003c0003t0001g0240 a0003c0003t0001g0241 a0003c0003t0001g0242 a0003c0003t0005g0229 a0003c0008t0001g0225	35	242	0.1446	-14	c.110 others(33): Show c.110-15954_110-15941delTTTTTTTTTTTTTT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28396642	TTTTGTGT others(7): Show TTTTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG02717.hp1 NA19030.hp1 others(1): Show HG01175.hp1 HG02717.hp1 NA19030.hp1 NA19030.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0004c0004t0001 a0001c0001t0001 a0004c0004t0001	a0001c0001t0001g0110 a0001c0001t0001g0148 a0001c0001t0001g0173 others(1): Show a0001c0001t0001g0110 a0001c0001t0001g0148 a0001c0001t0001g0173 a0004c0004t0001g0200	4	242	0.0165	-14	c.762 others(31): Show c.762+5233_762+5246delTTGTGTGTGTGTGT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28494122	AGAGATTT others(7): Show AGAGATTTCTGCTGG	A A	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0088 a0002c0002t0001g0088	1	242	0.0041	-14	c.121 others(33): Show c.1215+9960_1215+9973delGATTTCTGCTGGGA	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC92_chr12_123930626_123977831	123972621	TGGGCGGG others(7): Show TGGGCGGGGCGCGGC	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00642.hp2 HG01109.hp2 HG01884.hp2 others(23): Show HG00642.hp2 HG01109.hp2 HG01884.hp2 HG02055.hp1 HG02280.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02622.hp2 HG02717.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG03195.hp1 HG03225.hp1 HG03471.hp2 HG03486.hp2 HG03579.hp1 HG06807.hp2 NA18522.hp2 NA19030.hp2 NA19043.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010	a0001c0001t0004g0008 a0001c0001t0004g0009 a0001c0001t0004g0021 others(12): Show a0001c0001t0004g0008 a0001c0001t0004g0009 a0001c0001t0004g0021 a0001c0001t0004g0023 a0001c0001t0004g0042 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0047 a0001c0001t0004g0048 a0001c0001t0004g0049 a0001c0001t0004g0050 a0001c0001t0007g0012 a0001c0001t0010g0022	26	250	0.1040	-14	c.-16 others(23): Show c.-166_-153delGCCGCGCCCCGCCC	CCDC92	ENSG00000119242.9	transcript	ENST00000238156.8	protein_coding	1/5	28317		chr12	TogoVar
CCDC93_chr2_117910481_118019070	117983630	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02895.hp1 HG02965.hp1 others(3): Show HG02559.hp1 HG02895.hp1 HG02965.hp1 HG03209.hp2 HG04115.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0004 a0001c0001t0025 a0001c0004t0007 others(1): Show a0001c0001t0004 a0001c0001t0025 a0001c0004t0007 a0001c0004t0043	a0001c0001t0004g0111 a0001c0001t0004g0118 a0001c0001t0025g0046 others(3): Show a0001c0001t0004g0111 a0001c0001t0004g0118 a0001c0001t0025g0046 a0001c0004t0007g0042 a0001c0004t0007g0043 a0001c0004t0043g0040	6	322	0.0186	-14	c.620 others(31): Show c.620+2325_620+2338delTATATATATATATA	CCDC93	ENSG00000125633.11	transcript	ENST00000376300.7	protein_coding	7/23			chr2	TogoVar
CCDC96_chr4_7035849_7048001	7040261	TAATAATA others(7): Show TAATAATAATAATAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	1	432	0.0023	-14	c.99 others(24): Show c.996_*1009delTTATTATTATTATT	CCDC96	ENSG00000173013.6	transcript	ENST00000310085.6	protein_coding		587		chr4	TogoVar
CCDC9_chr19_47251525_47276953	47254419	TTTTATAT others(7): Show TTTTATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG01192.hp1 HG01496.hp2 others(6): Show HG00741.hp2 HG01192.hp1 HG01496.hp2 HG03017.hp1 HG03710.hp2 HG04204.hp2 NA18968.hp2 NA19083.hp1 NA20805.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0001 a0003c0004 a0001c0002 a0002c0001 a0003c0004	a0001c0002t0002 a0002c0001t0022 a0003c0004t0006 others(5): Show a0001c0002t0002 a0002c0001t0022 a0003c0004t0006 a0003c0004t0007 a0003c0004t0008 a0003c0004t0010 a0003c0004t0015 a0003c0004t0071	a0001c0002t0002g0053 a0002c0001t0022g0002 a0003c0004t0006g0011 others(6): Show a0001c0002t0002g0053 a0002c0001t0022g0002 a0003c0004t0006g0011 a0003c0004t0006g0055 a0003c0004t0007g0052 a0003c0004t0008g0006 a0003c0004t0010g0012 a0003c0004t0015g0062 a0003c0004t0071g0056	9	402	0.0224	-14	c.-22 others(25): Show c.-2261_-2248delTTTATATATATATA	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding		2105		chr19	TogoVar
CCDC9_chr19_47251525_47276953	47254421	TTATATAT others(7): Show TTATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0010 a0004c0005t0010	a0004c0005t0010g0140 a0004c0005t0010g0140	1	402	0.0025	-14	c.-22 others(25): Show c.-2259_-2246delTATATATATATATA	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding		2103		chr19	TogoVar
CCDC9_chr19_47251525_47276953	47265984	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0050 a0005c0006t0050	a0005c0006t0050g0132 a0005c0006t0050g0132	1	402	0.0025	-14	c.721 others(29): Show c.721-611_721-598delTTTTTTTTTTTTTT	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271724	TGTGTGTG others(7): Show TGTGTGTGTGCGCGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0069 a0004c0005t0069	a0004c0005t0069g0156 a0004c0005t0069g0156	1	402	0.0025	-14	c.48 others(21): Show c.48_*61delTGTGTGTGCGCGCG	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	48	INFO_REALIGN_3_PRIME	chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271726	TGTGTGTG others(7): Show TGTGTGTGCGCGCGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02602.hp1 HG02723.hp1 HG02970.hp2 others(5): Show HG02602.hp1 HG02723.hp1 HG02970.hp2 HG03225.hp1 HG03225.hp2 HG03710.hp2 NA18906.hp1 NA20300.hp1	a0003 a0004 a0005 a0003 a0004 a0005	a0003c0004 a0004c0005 a0004c0007 others(1): Show a0003c0004 a0004c0005 a0004c0007 a0005c0006	a0003c0004t0007 a0004c0005t0007 a0004c0007t0007 others(1): Show a0003c0004t0007 a0004c0005t0007 a0004c0007t0007 a0005c0006t0007	a0003c0004t0007g0011 a0003c0004t0007g0052 a0004c0005t0007g0035 others(5): Show a0003c0004t0007g0011 a0003c0004t0007g0052 a0004c0005t0007g0035 a0004c0005t0007g0036 a0004c0005t0007g0139 a0004c0005t0007g0141 a0004c0007t0007g0148 a0005c0006t0007g0143	8	402	0.0199	-14	c.50 others(21): Show c.50_*63delTGTGTGCGCGCGCG	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	50	INFO_REALIGN_3_PRIME	chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271728	TGTGTGCG others(7): Show TGTGTGCGCGCGCGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00642.hp1 HG00673.hp1 HG01081.hp1 others(7): Show HG00642.hp1 HG00673.hp1 HG01081.hp1 HG01496.hp2 HG02486.hp2 HG02683.hp2 HG02698.hp2 HG02976.hp1 NA19055.hp1 NA19083.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0002 a0001c0003 a0003c0004 others(1): Show a0001c0002 a0001c0003 a0003c0004 a0005c0006	a0001c0002t0008 a0001c0002t0077 a0001c0003t0008 others(2): Show a0001c0002t0008 a0001c0002t0077 a0001c0003t0008 a0003c0004t0008 a0005c0006t0127	a0001c0002t0008g0007 a0001c0002t0008g0095 a0001c0002t0008g0096 others(7): Show a0001c0002t0008g0007 a0001c0002t0008g0095 a0001c0002t0008g0096 a0001c0002t0077g0007 a0001c0003t0008g0070 a0003c0004t0008g0006 a0003c0004t0008g0049 a0003c0004t0008g0051 a0003c0004t0008g0057 a0005c0006t0127g0033	10	402	0.0249	-14	c.52 others(21): Show c.52_*65delTGTGCGCGCGCGCG	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	52	INFO_REALIGN_3_PRIME	chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271730	TGTGCGCG others(7): Show TGTGCGCGCGCGCGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01070.hp2 HG01168.hp1 HG01169.hp1 others(22): Show HG01070.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG02148.hp2 HG02273.hp2 HG02451.hp2 HG02738.hp2 HG03688.hp2 HG03834.hp2 HG03942.hp2 HG04115.hp1 NA18522.hp1 NA18747.hp2 NA18945.hp2 NA18952.hp2 NA18966.hp2 NA18979.hp1 NA18980.hp1 NA18993.hp2 NA19000.hp2 NA19054.hp1 NA19062.hp2 NA19085.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0003 a0001c0011 others(2): Show a0001c0002 a0001c0003 a0001c0011 a0002c0001 a0003c0004	a0001c0002t0004 a0001c0003t0004 a0001c0011t0004 others(3): Show a0001c0002t0004 a0001c0003t0004 a0001c0011t0004 a0002c0001t0004 a0002c0001t0135 a0003c0004t0004	a0001c0002t0004g0001 a0001c0002t0004g0007 a0001c0002t0004g0013 others(15): Show a0001c0002t0004g0001 a0001c0002t0004g0007 a0001c0002t0004g0013 a0001c0002t0004g0015 a0001c0002t0004g0023 a0001c0002t0004g0080 a0001c0002t0004g0097 a0001c0002t0004g0119 a0001c0003t0004g0004 a0001c0003t0004g0009 a0001c0003t0004g0027 a0001c0003t0004g0071 a0001c0003t0004g0083 a0001c0003t0004g0120 a0001c0011t0004g0073 a0002c0001t0004g0005 a0002c0001t0135g0037 a0003c0004t0004g0060	25	402	0.0622	-14	c.54 others(21): Show c.54_*67delTGCGCGCGCGCGCG	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	54	INFO_REALIGN_3_PRIME	chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271732	TGCGCGCG others(7): Show TGCGCGCGCGCGCGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01884.hp2 HG02615.hp2 HG03130.hp1 others(3): Show HG01884.hp2 HG02615.hp2 HG03130.hp1 HG03831.hp2 NA18945.hp1 NA19077.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0003 a0002c0001 a0005c0006 a0001c0003 a0002c0001 a0005c0006	a0001c0003t0036 a0002c0001t0036 a0002c0001t0088 others(2): Show a0001c0003t0036 a0002c0001t0036 a0002c0001t0088 a0005c0006t0032 a0005c0006t0129	a0001c0003t0036g0081 a0002c0001t0036g0002 a0002c0001t0088g0164 others(3): Show a0001c0003t0036g0081 a0002c0001t0036g0002 a0002c0001t0088g0164 a0005c0006t0032g0046 a0005c0006t0032g0210 a0005c0006t0129g0032	6	402	0.0149	-14	c.69 others(21): Show c.69_*82delGCGCGCGCGCGCGC	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	69	INFO_REALIGN_3_PRIME	chr19	TogoVar
CCKBR_chr11_6254838_6277127	6258612	GGATAGGA others(7): Show GGATAGGAATCTGGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19068.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	1	426	0.0024	-14	c.-13 others(25): Show c.-1316_-1303delGATAGGAATCTGGA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding		1225		chr11	TogoVar
CCL17_chr16_57399767_57421063	57403445	TATTATAT others(7): Show TATTATATTATAATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	388	0.0026	-14	c.-14 others(25): Show c.-1450_-1437delATTATATTATAATA	CCL17	ENSG00000102970.11	transcript	ENST00000219244.9	protein_coding		1321		chr16	TogoVar
CCL18_chr17_36059272_36077032	36076443	AACCTAGC others(7): Show AACCTAGCAGTGGGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	455	0.0022	-14	c.54 others(25): Show c.5403_*5416delACCTAGCAGTGGGG	CCL18	ENSG00000275385.2	transcript	ENST00000616054.2	protein_coding		4412		chr17	TogoVar
CCL20_chr2_227808842_227822556	227822199	CATATATA others(7): Show CATATATATATATAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18979.hp2 NA18980.hp1 NA18979.hp2 NA18980.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0007 a0001c0002t0002g0007	2	448	0.0045	-14	c.51 others(25): Show c.5117_*5130delATATATATATATAT	CCL20	ENSG00000115009.13	transcript	ENST00000358813.5	protein_coding		4644		chr2	TogoVar
CCL24_chr7_75805825_75818806	75818446	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19082.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0005 a0001c0001t0007g0005	1	406	0.0025	-14	c.-47 others(25): Show c.-4745_-4732delTTTTTTTTTTTTTT	CCL24	ENSG00000106178.7	transcript	ENST00000222902.7	protein_coding		4641		chr7	TogoVar
CCL25_chr19_8047760_8067650	8059138	TTATATAA others(7): Show TTATATAATATATAA	T T	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18972.hp1 NA18977.hp2 others(1): Show NA18947.hp2 NA18972.hp1 NA18977.hp2 NA19082.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0173 a0002c0002t0002g0174 a0002c0002t0002g0175 others(1): Show a0002c0002t0002g0173 a0002c0002t0002g0174 a0002c0002t0002g0175 a0002c0002t0002g0211	4	428	0.0094	-14	c.445 others(31): Show c.445+1225_445+1238delATATATAATATATA	CCL25	ENSG00000131142.14	transcript	ENST00000315626.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr19	TogoVar
CCL2_chr17_34250285_34262203	34255978	ACAGCTCC others(7): Show ACAGCTCCTCCTTCT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00280.hp1 others(187): Show HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00621.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01070.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG02004.hp2 HG02040.hp2 HG02055.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02155.hp2 HG02165.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02622.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03579.hp2 HG03704.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04184.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18945.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp2 NA18957.hp2 NA18959.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp2 NA19001.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp2 NA19091.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0002g0002 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0002g0002 a0001c0001t0002g0009 a0001c0001t0005g0002	190	434	0.4378	-14	c.77- others(27): Show c.77-242_77-229delAGCTCCTCCTTCTC	CCL2	ENSG00000108691.10	transcript	ENST00000225831.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCL3_chr17_36083256_36095143	36094586	TAGCCAGC others(7): Show TAGCCAGCAGTCAAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	381	0.0026	-14	c.-45 others(25): Show c.-4542_-4529delGTTGACTGCTGGCT	CCL3	ENSG00000277632.2	transcript	ENST00000613922.2	protein_coding		4444		chr17	TogoVar
CCL4L2_chr17_36206063_36217873	36217624	CTATCTAT others(7): Show CTATCTATCTATCTA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01071.hp1 HG02683.hp1 HG03239.hp2 others(3): Show HG01071.hp1 HG02683.hp1 HG03239.hp2 HG04115.hp1 NA19064.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0004g0003 a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0004g0003	6	156	0.0385	-14	c.52 others(25): Show c.5202_*5215delTATCTATCTATCTA	CCL4L2	ENSG00000276070.5	transcript	ENST00000617405.5	protein_coding		4752		chr17	TogoVar
CCM2_chr7_44995201_45081453	45008356	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00280.hp1 others(131): Show HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00544.hp2 HG00558.hp1 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00738.hp2 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01167.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01928.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02071.hp2 HG02080.hp1 HG02132.hp1 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp1 HG02602.hp1 HG02622.hp2 HG02683.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02922.hp1 HG02965.hp1 HG03017.hp2 HG03139.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp2 HG04199.hp2 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18940.hp2 NA18943.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18965.hp1 NA18966.hp2 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18975.hp2 NA18979.hp2 NA18983.hp2 NA18987.hp1 NA18989.hp2 NA18993.hp2 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19054.hp1 NA19058.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19066.hp2 NA19068.hp1 NA19075.hp2 NA19078.hp2 NA19079.hp2 NA19087.hp2 NA19088.hp2 NA19089.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA21309.hp2	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0001c0013 a0003c0004 others(2): Show a0001c0001 a0001c0013 a0003c0004 a0004c0007 a0005c0011	a0001c0001t0001 a0001c0001t0005 a0001c0013t0001 others(3): Show a0001c0001t0001 a0001c0001t0005 a0001c0013t0001 a0003c0004t0001 a0004c0007t0001 a0005c0011t0001	a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0164 others(130): Show a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0005g0235 a0001c0013t0001g0245 a0003c0004t0001g0169 a0003c0004t0001g0193 a0003c0004t0001g0201 a0003c0004t0001g0208 a0003c0004t0001g0224 a0003c0004t0001g0225 a0003c0004t0001g0226 a0003c0004t0001g0227 a0003c0004t0001g0228 a0003c0004t0001g0229 a0003c0004t0001g0230 a0003c0004t0001g0231 a0003c0004t0001g0297 a0004c0007t0001g0200 a0004c0007t0001g0242 a0004c0007t0001g0248 a0004c0007t0001g0279 a0004c0007t0001g0300 a0005c0011t0001g0190	134	316	0.4241	-14	c.30+ others(29): Show c.30+8007_30+8020delTTTTTTTTTTTTTT	CCM2	ENSG00000136280.17	transcript	ENST00000258781.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr7	TogoVar
CCN1_chr1_85575761_85588950	85580532	GACACACA others(7): Show GACACACACACAGAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG01109.hp2 others(9): Show HG00280.hp1 HG00280.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01515.hp2 HG01517.hp2 HG02723.hp2 HG03041.hp1 NA18960.hp1 NA18964.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0002 a0001c0001t0001g0004	12	466	0.0258	-14	c.-45 others(23): Show c.-452_-439delACACACACACAGAC	CCN1	ENSG00000142871.18	transcript	ENST00000451137.7	protein_coding		228		chr1	TogoVar
CCN1_chr1_85575761_85588950	85580544	GACACACA others(7): Show GACACACACACACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18973.hp1 NA18994.hp2 NA18973.hp1 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	2	466	0.0043	-14	c.-44 others(23): Show c.-440_-427delACACACACACACAC	CCN1	ENSG00000142871.18	transcript	ENST00000451137.7	protein_coding		216		chr1	TogoVar
CCN3_chr8_119411446_119429434	119422146	CAGAGAGA others(7): Show CAGAGAGAGACAGAG	C C	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG04228.hp1 HG03831.hp1 HG04228.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0054 a0002c0002t0004g0055 a0002c0002t0004g0054 a0002c0002t0004g0055	2	352	0.0057	-14	c.778 others(29): Show c.778-680_778-667delCAGAGAGAGAGAGA	CCN3	ENSG00000136999.5	transcript	ENST00000259526.4	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
CCN4_chr8_133186039_133236690	133196601	AAGGGTTC others(7): Show AAGGGTTCTAATCCC	A A	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01433.hp1 HG01358.hp1 HG01433.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0004 a0001c0002t0003 a0001c0002t0004	a0001c0002t0003g0083 a0001c0002t0004g0082 a0001c0002t0003g0083 a0001c0002t0004g0082	2	396	0.0051	-14	c.69+ others(29): Show c.69+5391_69+5404delGGTTCTAATCCCAG	CCN4	ENSG00000104415.14	transcript	ENST00000250160.11	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
CCNA1_chr13_36427495_36447870	36433372	TTCTTTCT others(7): Show TTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03195.hp2 NA18906.hp1 others(1): Show HG03130.hp2 HG03195.hp2 NA18906.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0061 a0001c0001t0001g0156 a0001c0001t0001g0157	4	440	0.0091	-14	c.165 others(29): Show c.165+153_165+166delCTTTCTTTCTTTCT	CCNA1	ENSG00000133101.10	transcript	ENST00000255465.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
CCNB1IP1_chr14_20306370_20338279	20309300	TCCCTCTC others(7): Show TCCCTCTCCCCTCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG01081.hp2 others(4): Show HG00099.hp1 HG00140.hp1 HG01081.hp2 HG01109.hp2 HG01515.hp1 HG02055.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008	a0001c0001t0002g0004 a0001c0001t0002g0082 a0001c0001t0002g0105 others(4): Show a0001c0001t0002g0004 a0001c0001t0002g0082 a0001c0001t0002g0105 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0178 a0001c0001t0008g0165	7	418	0.0168	-14	c.22 others(25): Show c.2236_*2249delGAGAGGGGAGAGGG	CCNB1IP1	ENSG00000100814.19	transcript	ENST00000358932.9	protein_coding		2069		chr14	TogoVar
CCNB1_chr5_69162150_69183245	69175982	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	420	0.0024	-14	c.108 others(31): Show c.1083+465_1083+478delTATATATATATATA	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
CCNB2_chr15_59100146_59130045	59103905	GGCCCCCC others(7): Show GGCCCCCCGCCCCCC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 HG02132.hp1 HG02257.hp1 others(10): Show HG00280.hp2 HG02132.hp1 HG02257.hp1 HG02280.hp1 HG02486.hp1 HG02523.hp1 HG02572.hp1 HG03209.hp2 NA18955.hp1 NA18995.hp1 NA19000.hp1 NA19007.hp1 NA20129.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0006 a0001c0001 a0001c0002 a0004c0006	a0001c0001t0001 a0001c0002t0001 a0004c0006t0001 a0001c0001t0001 a0001c0002t0001 a0004c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0014 others(8): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0059 a0001c0001t0001g0123 a0001c0001t0001g0217 a0001c0002t0001g0045 a0004c0006t0001g0046	13	388	0.0335	-14	c.-13 others(25): Show c.-1363_-1350delGCCCCCCGCCCCCC	CCNB2	ENSG00000157456.8	transcript	ENST00000288207.7	protein_coding		1240		chr15	TogoVar
CCNC_chr6_99537387_99573660	99560530	CAACTCTA others(7): Show CAACTCTAAGAATAG	C C	intron_variant intron_variant	MODIFIER	HG04204.hp1 NA19240.hp2 HG04204.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0072 a0001c0001t0001g0067 a0001c0001t0001g0072	2	410	0.0049	-14	c.294 others(29): Show c.294+823_294+836delCTATTCTTAGAGTT	CCNC	ENSG00000112237.13	transcript	ENST00000520429.6	protein_coding	4/11			chr6	TogoVar
CCNDBP1_chr15_43180403_43202177	43193332	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp2 NA19005.hp1 NA18963.hp1 NA18963.hp2 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0128 a0001c0001t0002g0127 a0001c0001t0002g0175 a0001c0001t0001g0128 a0001c0001t0002g0127 a0001c0001t0002g0175	3	358	0.0084	-14	c.921 others(29): Show c.921+549_921+562delAAAAAAAAAAAAAA	CCNDBP1	ENSG00000166946.14	transcript	ENST00000300213.9	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CCNDBP1_chr15_43180403_43202177	43194046	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0124	1	358	0.0028	-14	c.922 others(29): Show c.922-352_922-339delTTTTTTTTTTTTTT	CCNDBP1	ENSG00000166946.14	transcript	ENST00000300213.9	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CCNE1_chr19_29806991_29829312	29811703	CCGCCCCG others(7): Show CCGCCCCGCGTCCCG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19055.hp2 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	426	0.0024	-14	c.-47 others(23): Show c.-473_-460delCGCCCCGCGTCCCG	CCNE1	ENSG00000105173.14	transcript	ENST00000262643.8	protein_coding		287		chr19	TogoVar
CCNE1_chr19_29806991_29829312	29826648	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG01891.hp2 HG02109.hp1 others(12): Show HG01884.hp1 HG01891.hp2 HG02109.hp1 HG02572.hp1 HG02630.hp1 HG02723.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02970.hp1 HG03471.hp1 NA18906.hp2 NA19030.hp2 NA19043.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0001t0005 a0001c0005t0002 a0001c0001t0002 a0001c0001t0005 a0001c0005t0002	a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0024 others(3): Show a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0024 a0001c0001t0002g0089 a0001c0001t0005g0001 a0001c0005t0002g0008	15	426	0.0352	-14	c.28 others(25): Show c.2872_*2885delTTTTTTTTTTTTTT	CCNE1	ENSG00000105173.14	transcript	ENST00000262643.8	protein_coding		2337		chr19	TogoVar
CCNF_chr16_2424447_2463854	2435664	CACATATA others(7): Show CACATATATATATAT	C C	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA18943.hp2 NA18941.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0032 a0001c0001t0001g0033	2	276	0.0073	-14	c.279 others(29): Show c.279-140_279-127delCATATATATATATA	CCNF	ENSG00000162063.13	transcript	ENST00000397066.9	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCNF_chr16_2424447_2463854	2441937	TTATATAT others(7): Show TTATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03927.hp1 NA18943.hp1 HG03927.hp1 NA18943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0049 a0001c0001t0001g0016 a0001c0001t0001g0049	2	276	0.0073	-14	c.778 others(31): Show c.778-1680_778-1667delATATATATATATAT	CCNF	ENSG00000162063.13	transcript	ENST00000397066.9	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCNF_chr16_2424447_2463854	2443171	TATATATA others(7): Show TATATATAATATATA	T T	intron_variant intron_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	276	0.0036	-14	c.778 others(29): Show c.778-470_778-457delATATATAATATATA	CCNF	ENSG00000162063.13	transcript	ENST00000397066.9	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCNF_chr16_2424447_2463854	2461515	TGCTCACA others(7): Show TGCTCACAGGGCCCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02451.hp1 HG02896.hp2 others(9): Show HG02145.hp1 HG02451.hp1 HG02896.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03471.hp2 HG03516.hp2 HG03579.hp2 HG06807.hp2 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006	a0001c0001t0002g0254 a0001c0001t0002g0256 a0001c0001t0002g0257 others(9): Show a0001c0001t0002g0254 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0004g0249 a0001c0001t0004g0250 a0001c0001t0004g0251 a0001c0001t0004g0253 a0001c0001t0006g0014	12	276	0.0435	-14	c.44 others(25): Show c.4496_*4509delGCTCACAGGGCCCC	CCNF	ENSG00000162063.13	transcript	ENST00000397066.9	protein_coding		2662		chr16	TogoVar
CCNG2_chr4_77152207_77175060	77162376	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19083.hp2 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	428	0.0023	-14	c.705 others(29): Show c.705+642_705+655delTTTTTTTTTTTTTT	CCNG2	ENSG00000138764.15	transcript	ENST00000316355.10	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCNI_chr4_77042155_77080989	77044073	GCATTTCA others(7): Show GCATTTCATCCTTCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0012 a0002c0003t0012	a0002c0003t0012g0074 a0002c0003t0012g0074	1	388	0.0026	-14	c.41 others(25): Show c.4132_*4145delAGAAGGATGAAATG	CCNI	ENSG00000118816.11	transcript	ENST00000237654.9	protein_coding		3081		chr4	TogoVar
CCNI_chr4_77042155_77080989	77067790	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0126	1	388	0.0026	-14	c.-43 others(31): Show c.-43-1399_-43-1386delTTTTTTTTTTTTTT	CCNI	ENSG00000118816.11	transcript	ENST00000237654.9	protein_coding	1/6			chr4	TogoVar
CCNJL_chr5_160244083_160317564	160266256	CAGCCTTT others(7): Show CAGCCTTTGCTGGCA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00609.hp1 HG00642.hp2 others(40): Show HG00408.hp2 HG00609.hp1 HG00642.hp2 HG02135.hp1 HG02145.hp2 HG02155.hp1 HG02165.hp1 HG02451.hp2 HG02523.hp2 HG02630.hp1 HG02809.hp2 HG03017.hp2 HG03041.hp2 HG03492.hp1 HG03579.hp1 HG03688.hp2 HG04115.hp1 HG04184.hp1 HG04228.hp1 HG04228.hp2 NA18940.hp2 NA18945.hp1 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18952.hp1 NA18955.hp2 NA18957.hp1 NA18963.hp2 NA18965.hp2 NA18967.hp2 NA19001.hp2 NA19002.hp2 NA19003.hp1 NA19007.hp2 NA19063.hp1 NA19064.hp2 NA19081.hp2 NA19082.hp2 NA19085.hp1 NA19087.hp2 NA19089.hp1 NA19090.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 others(4): Show a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 a0002c0002t0019 a0002c0002t0023 a0002c0002t0040 a0002c0002t0050	a0002c0002t0001g0268 a0002c0002t0001g0269 a0002c0002t0003g0040 others(40): Show a0002c0002t0001g0268 a0002c0002t0001g0269 a0002c0002t0003g0040 a0002c0002t0003g0041 a0002c0002t0003g0051 a0002c0002t0003g0054 a0002c0002t0003g0055 a0002c0002t0003g0057 a0002c0002t0003g0059 a0002c0002t0003g0062 a0002c0002t0003g0063 a0002c0002t0003g0066 a0002c0002t0003g0067 a0002c0002t0003g0068 a0002c0002t0003g0069 a0002c0002t0003g0075 a0002c0002t0003g0076 a0002c0002t0003g0079 a0002c0002t0003g0080 a0002c0002t0003g0095 a0002c0002t0003g0113 a0002c0002t0003g0114 a0002c0002t0003g0120 a0002c0002t0003g0122 a0002c0002t0003g0137 a0002c0002t0003g0146 a0002c0002t0003g0177 a0002c0002t0003g0178 a0002c0002t0003g0183 a0002c0002t0003g0192 a0002c0002t0003g0195 a0002c0002t0003g0220 a0002c0002t0003g0240 a0002c0002t0003g0263 a0002c0002t0003g0264 a0002c0002t0003g0265 a0002c0002t0005g0070 a0002c0002t0019g0156 a0002c0002t0019g0157 a0002c0002t0023g0300 a0002c0002t0023g0301 a0002c0002t0040g0074 a0002c0002t0050g0292	43	338	0.1272	-14	c.281 others(31): Show c.281-6499_281-6486delTGCCAGCAAAGGCT	CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	3/5			chr5	TogoVar

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