Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
COL19A1_chr6_69861556_70217468	70118814	GTTGTGCC others(7): Show GTTGTGCCCTTGCCT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00642.hp2 HG00741.hp1 others(67): Show HG00099.hp1 HG00642.hp2 HG00741.hp1 HG01106.hp2 HG01167.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01257.hp2 HG01361.hp1 HG01496.hp1 HG01928.hp1 HG02040.hp1 HG02109.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 NA18941.hp2 NA18948.hp2 NA18949.hp2 NA18959.hp1 NA18962.hp1 NA18966.hp2 NA18979.hp1 NA18991.hp2 NA18997.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19060.hp1 NA19060.hp2 NA19072.hp2 NA19077.hp1 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0008 a0010	a0001c0001 a0001c0002 a0001c0005 others(12): Show a0001c0001 a0001c0002 a0001c0005 a0001c0007 a0001c0008 a0002c0003 a0002c0004 a0002c0006 a0002c0009 a0002c0011 a0002c0020 a0003c0010 a0004c0017 a0008c0019 a0010c0021	a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 others(26): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 a0001c0001t0022 a0001c0002t0002 a0001c0002t0024 a0001c0005t0003 a0001c0007t0005 a0001c0007t0017 a0001c0007t0033 a0001c0007t0035 a0001c0008t0004 a0002c0003t0002 a0002c0003t0012 a0002c0004t0001 a0002c0004t0002 a0002c0004t0006 a0002c0004t0008 a0002c0004t0011 a0002c0004t0019 a0002c0006t0007 a0002c0009t0004 a0002c0011t0005 a0002c0020t0006 a0003c0010t0013 a0003c0010t0027 a0004c0017t0026 a0008c0019t0001 a0010c0021t0001	a0001c0001t0001g0016 a0001c0001t0001g0047 a0001c0001t0001g0053 others(67): Show a0001c0001t0001g0016 a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0062 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0118 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0135 a0001c0001t0001g0153 a0001c0001t0001g0167 a0001c0001t0001g0180 a0001c0001t0006g0149 a0001c0001t0006g0150 a0001c0001t0009g0134 a0001c0001t0009g0144 a0001c0001t0009g0151 a0001c0001t0009g0152 a0001c0001t0009g0170 a0001c0001t0022g0069 a0001c0002t0002g0051 a0001c0002t0002g0061 a0001c0002t0024g0028 a0001c0005t0003g0148 a0001c0007t0005g0025 a0001c0007t0005g0084 a0001c0007t0005g0089 a0001c0007t0005g0096 a0001c0007t0005g0097 a0001c0007t0005g0126 a0001c0007t0017g0093 a0001c0007t0017g0147 a0001c0007t0033g0120 a0001c0007t0035g0157 a0001c0008t0004g0137 a0001c0008t0004g0141 a0002c0003t0002g0026 a0002c0003t0012g0164 a0002c0004t0001g0036 a0002c0004t0001g0124 a0002c0004t0002g0033 a0002c0004t0006g0007 a0002c0004t0008g0038 a0002c0004t0011g0111 a0002c0004t0019g0011 a0002c0006t0007g0085 a0002c0009t0004g0031 a0002c0009t0004g0067 a0002c0009t0004g0128 a0002c0009t0004g0129 a0002c0009t0004g0133 a0002c0009t0004g0168 a0002c0009t0004g0176 a0002c0011t0005g0021 a0002c0011t0005g0076 a0002c0011t0005g0142 a0002c0020t0006g0006 a0003c0010t0013g0172 a0003c0010t0013g0173 a0003c0010t0027g0119 a0004c0017t0026g0130 a0008c0019t0001g0106 a0010c0021t0001g0052	70	182	0.3846	-14	c.127 others(33): Show c.1279-3061_1279-3048delGCCCTTGCCTTTGT	COL19A1	ENSG00000082293.13	transcript	ENST00000620364.5	protein_coding	16/50		INFO_REALIGN_3_PRIME	chr6	TogoVar
COL1A1_chr17_50179101_50206631	50199698	AGCCCCAG others(7): Show AGCCCCAGGCCCCAG	A A	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0178 a0001c0001t0002g0178	1	448	0.0022	-14	c.298 others(27): Show c.298+41_298+54delCTGGGGCCTGGGGC	COL1A1	ENSG00000108821.14	transcript	ENST00000225964.10	protein_coding	2/50			chr17	TogoVar
COL20A1_chr20_63288186_63339806	63297357	CCAGCTCA others(7): Show CCAGCTCAGGGGACT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0130 a0001c0001t0002g0130	1	290	0.0035	-14	c.83- others(27): Show c.83-539_83-526delTCAGCTCAGGGGAC	COL20A1	ENSG00000101203.17	transcript	ENST00000358894.11	protein_coding	2/35		INFO_REALIGN_3_PRIME	chr20	TogoVar
COL21A1_chr6_56051590_56252580	56053862	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01358.hp2 HG03669.hp1 HG01358.hp2 HG03669.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0003 a0002c0003t0001 a0002c0003t0003	a0002c0003t0001g0232 a0002c0003t0003g0044 a0002c0003t0001g0232 a0002c0003t0003g0044	2	264	0.0076	-14	c.37 others(25): Show c.3781_*3794delACACACACACACAC	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding		2727		chr6	TogoVar
COL21A1_chr6_56051590_56252580	56206693	AATAAATA others(7): Show AATAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0017 a0004c0004t0017	a0004c0004t0017g0006 a0004c0004t0017g0006	1	264	0.0038	-14	c.-38 others(33): Show c.-38-24051_-38-24038delATATATATATTTAT	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	1/29			chr6	TogoVar
COL22A1_chr8_138583235_138919041	138623262	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02723.hp2 NA18906.hp1 HG02723.hp2 NA18906.hp1	a0002 a0008 a0002 a0008	a0002c0009 a0008c0055 a0002c0009 a0008c0055	a0002c0009t0001 a0008c0055t0005 a0002c0009t0001 a0008c0055t0005	a0002c0009t0001g0104 a0008c0055t0005g0148 a0002c0009t0001g0104 a0008c0055t0005g0148	2	158	0.0127	-14	c.377 others(31): Show c.3771+456_3771+469delCACACACACACACA	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	52/64			chr8	TogoVar
COL22A1_chr8_138583235_138919041	138652735	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	158	0.0063	-14	c.333 others(33): Show c.3334-2971_3334-2958delAAAAAAAAAAAAAA	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	45/64			chr8	TogoVar
COL22A1_chr8_138583235_138919041	138660895	CACAAACA others(7): Show CACAAACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02486.hp1 HG03209.hp1 HG00639.hp1 HG02486.hp1 HG03209.hp1	a0001 a0001	a0001c0010 a0001c0012 a0001c0010 a0001c0012	a0001c0010t0001 a0001c0012t0005 a0001c0010t0001 a0001c0012t0005	a0001c0010t0001g0025 a0001c0010t0001g0027 a0001c0012t0005g0143 a0001c0010t0001g0025 a0001c0010t0001g0027 a0001c0012t0005g0143	3	158	0.0190	-14	c.324 others(31): Show c.3241-429_3241-416delATGTGTGTGTTTGT	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	43/64			chr8	TogoVar
COL22A1_chr8_138583235_138919041	138661025	CACACACA others(7): Show CACACACATATACAG	C C	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01891.hp2 HG02280.hp1 others(21): Show HG01433.hp1 HG01891.hp2 HG02280.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp2 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp1 HG03540.hp2 HG03579.hp2 HG03688.hp1 HG04199.hp1 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA20129.hp2 NA20752.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0006 a0008 a0014 a0015	a0001c0002 a0001c0006 a0001c0008 others(16): Show a0001c0002 a0001c0006 a0001c0008 a0001c0014 a0001c0015 a0001c0017 a0002c0003 a0002c0004 a0002c0005 a0002c0009 a0002c0011 a0002c0025 a0002c0029 a0003c0033 a0004c0019 a0006c0038 a0008c0055 a0014c0042 a0015c0039	a0001c0002t0001 a0001c0006t0001 a0001c0008t0002 others(20): Show a0001c0002t0001 a0001c0006t0001 a0001c0008t0002 a0001c0014t0011 a0001c0015t0001 a0001c0015t0002 a0001c0017t0005 a0001c0017t0007 a0002c0003t0001 a0002c0003t0003 a0002c0004t0002 a0002c0005t0001 a0002c0005t0003 a0002c0009t0001 a0002c0011t0012 a0002c0025t0004 a0002c0029t0002 a0003c0033t0002 a0004c0019t0001 a0006c0038t0004 a0008c0055t0005 a0014c0042t0013 a0015c0039t0001	a0001c0002t0001g0100 a0001c0006t0001g0062 a0001c0006t0001g0113 others(21): Show a0001c0002t0001g0100 a0001c0006t0001g0062 a0001c0006t0001g0113 a0001c0008t0002g0133 a0001c0014t0011g0091 a0001c0015t0001g0077 a0001c0015t0002g0120 a0001c0017t0005g0149 a0001c0017t0007g0147 a0002c0003t0001g0112 a0002c0003t0003g0001 a0002c0004t0002g0088 a0002c0005t0001g0074 a0002c0005t0003g0005 a0002c0009t0001g0072 a0002c0011t0012g0139 a0002c0025t0004g0103 a0002c0029t0002g0057 a0003c0033t0002g0015 a0004c0019t0001g0130 a0006c0038t0004g0033 a0008c0055t0005g0148 a0014c0042t0013g0140 a0015c0039t0001g0134	24	158	0.1519	-14	c.324 others(31): Show c.3241-559_3241-546delCTGTATATGTGTGT	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	43/64			chr8	TogoVar
COL22A1_chr8_138583235_138919041	138692463	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0071 a0001c0002t0001g0071	1	158	0.0063	-14	c.275 others(33): Show c.2754+1169_2754+1182delCACACACACACACA	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	35/64			chr8	TogoVar
COL22A1_chr8_138583235_138919041	138725752	GACACACA others(7): Show GACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00597.hp1 HG00597.hp2 others(50): Show HG00280.hp1 HG00597.hp1 HG00597.hp2 HG00639.hp2 HG00642.hp1 HG00735.hp2 HG00741.hp2 HG01070.hp1 HG01106.hp2 HG01109.hp1 HG01255.hp2 HG01261.hp2 HG01361.hp2 HG01433.hp2 HG01943.hp1 HG01943.hp2 HG01981.hp1 HG01981.hp2 HG02055.hp2 HG02258.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02622.hp1 HG02630.hp2 HG02723.hp1 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp1 HG02922.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03486.hp1 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp1 HG03710.hp2 HG03834.hp1 HG04228.hp2 NA18985.hp2 NA19011.hp1 NA19043.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0013	a0001c0001 a0001c0002 a0001c0006 others(24): Show a0001c0001 a0001c0002 a0001c0006 a0001c0008 a0001c0010 a0001c0015 a0001c0016 a0001c0018 a0001c0026 a0001c0028 a0001c0048 a0002c0003 a0002c0004 a0002c0005 a0002c0007 a0002c0009 a0002c0011 a0002c0023 a0002c0059 a0003c0013 a0003c0020 a0003c0031 a0004c0019 a0005c0021 a0005c0051 a0005c0061 a0013c0049	a0001c0001t0001 a0001c0001t0006 a0001c0002t0001 others(32): Show a0001c0001t0001 a0001c0001t0006 a0001c0002t0001 a0001c0002t0005 a0001c0006t0001 a0001c0006t0002 a0001c0008t0002 a0001c0010t0007 a0001c0015t0001 a0001c0016t0001 a0001c0018t0001 a0001c0026t0001 a0001c0028t0003 a0001c0048t0001 a0002c0003t0001 a0002c0004t0001 a0002c0005t0003 a0002c0007t0001 a0002c0007t0008 a0002c0009t0001 a0002c0011t0001 a0002c0011t0006 a0002c0011t0012 a0002c0023t0001 a0002c0059t0001 a0003c0013t0001 a0003c0013t0003 a0003c0020t0003 a0003c0020t0007 a0003c0031t0004 a0004c0019t0001 a0005c0021t0001 a0005c0051t0001 a0005c0061t0001 a0013c0049t0006	a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0080 others(50): Show a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0080 a0001c0001t0001g0116 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0129 a0001c0001t0006g0107 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0069 a0001c0002t0001g0071 a0001c0002t0001g0100 a0001c0002t0001g0102 a0001c0002t0001g0108 a0001c0002t0005g0141 a0001c0002t0005g0153 a0001c0006t0001g0054 a0001c0006t0001g0060 a0001c0006t0001g0062 a0001c0006t0002g0064 a0001c0008t0002g0093 a0001c0010t0007g0155 a0001c0015t0001g0068 a0001c0016t0001g0063 a0001c0016t0001g0132 a0001c0018t0001g0075 a0001c0026t0001g0061 a0001c0028t0003g0008 a0001c0048t0001g0109 a0002c0003t0001g0076 a0002c0003t0001g0084 a0002c0004t0001g0127 a0002c0005t0003g0007 a0002c0007t0001g0111 a0002c0007t0008g0030 a0002c0009t0001g0072 a0002c0011t0001g0019 a0002c0011t0006g0122 a0002c0011t0012g0139 a0002c0023t0001g0036 a0002c0059t0001g0051 a0003c0013t0001g0125 a0003c0013t0003g0006 a0003c0020t0003g0014 a0003c0020t0007g0150 a0003c0031t0004g0031 a0004c0019t0001g0130 a0005c0021t0001g0070 a0005c0021t0001g0079 a0005c0051t0001g0052 a0005c0061t0001g0105 a0013c0049t0006g0078	53	158	0.3354	-14	c.214 others(31): Show c.2140-326_2140-313delGTGTGTGTGTGTGT	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	23/64			chr8	TogoVar
COL23A1_chr5_178232618_178595393	178232828	TCGCCCCG others(7): Show TCGCCCCGCAGGCCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp2 HG03041.hp1 HG03098.hp1 others(2): Show HG01934.hp2 HG03041.hp1 HG03098.hp1 NA18522.hp1 NA18906.hp1	a0002 a0011 a0002 a0011	a0002c0003 a0011c0013 a0002c0003 a0011c0013	a0002c0003t0005 a0011c0013t0005 a0002c0003t0005 a0011c0013t0005	a0002c0003t0005g0066 a0002c0003t0005g0115 a0002c0003t0005g0131 others(2): Show a0002c0003t0005g0066 a0002c0003t0005g0115 a0002c0003t0005g0131 a0002c0003t0005g0151 a0011c0013t0005g0132	5	236	0.0212	-14	c.58 others(25): Show c.5856_*5869delGGGCCTGCGGGGCG	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding		4789		chr5	TogoVar
COL23A1_chr5_178232618_178595393	178302061	CCTCTGTG others(7): Show CCTCTGTGTGTGCCG	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00639.hp1 HG00738.hp1 others(54): Show HG00280.hp2 HG00639.hp1 HG00738.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01106.hp2 HG01168.hp1 HG01256.hp1 HG01261.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp2 HG02055.hp1 HG02071.hp2 HG02083.hp1 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02165.hp1 HG02257.hp1 HG02280.hp2 HG02486.hp2 HG02523.hp1 HG02622.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02895.hp2 HG02970.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03704.hp2 HG03831.hp2 HG03942.hp1 HG04199.hp2 HG04228.hp2 NA18943.hp1 NA18964.hp1 NA18999.hp2 NA19000.hp1 NA19010.hp1 NA19012.hp2 NA19063.hp1 NA19240.hp2 NA20805.hp2 NA21309.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0013	a0001c0001 a0001c0004 a0002c0002 others(9): Show a0001c0001 a0001c0004 a0002c0002 a0002c0003 a0002c0009 a0002c0022 a0003c0005 a0003c0007 a0003c0023 a0004c0006 a0005c0008 a0013c0010	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(21): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0014 a0001c0004t0001 a0001c0004t0002 a0002c0002t0001 a0002c0002t0011 a0002c0003t0001 a0002c0003t0002 a0002c0003t0003 a0002c0003t0004 a0002c0003t0005 a0002c0003t0006 a0002c0009t0008 a0002c0022t0009 a0003c0005t0003 a0003c0007t0001 a0003c0023t0010 a0004c0006t0003 a0004c0006t0004 a0005c0008t0002 a0013c0010t0002	a0001c0001t0002g0056 a0001c0001t0002g0083 a0001c0001t0002g0153 others(54): Show a0001c0001t0002g0056 a0001c0001t0002g0083 a0001c0001t0002g0153 a0001c0001t0002g0175 a0001c0001t0002g0189 a0001c0001t0003g0119 a0001c0001t0004g0035 a0001c0001t0004g0039 a0001c0001t0004g0041 a0001c0001t0004g0063 a0001c0001t0004g0109 a0001c0001t0004g0164 a0001c0001t0004g0174 a0001c0001t0004g0185 a0001c0001t0004g0193 a0001c0001t0004g0204 a0001c0001t0005g0009 a0001c0001t0005g0095 a0001c0001t0005g0107 a0001c0001t0005g0133 a0001c0001t0005g0216 a0001c0001t0014g0224 a0001c0004t0001g0042 a0001c0004t0002g0120 a0002c0002t0001g0014 a0002c0002t0001g0025 a0002c0002t0001g0026 a0002c0002t0001g0031 a0002c0002t0001g0032 a0002c0002t0001g0045 a0002c0002t0001g0046 a0002c0002t0001g0075 a0002c0002t0001g0104 a0002c0002t0001g0176 a0002c0002t0001g0177 a0002c0002t0001g0180 a0002c0002t0011g0038 a0002c0003t0001g0152 a0002c0003t0002g0206 a0002c0003t0003g0088 a0002c0003t0003g0173 a0002c0003t0004g0099 a0002c0003t0004g0100 a0002c0003t0005g0068 a0002c0003t0006g0229 a0002c0009t0008g0235 a0002c0022t0009g0233 a0003c0005t0003g0010 a0003c0005t0003g0145 a0003c0007t0001g0012 a0003c0007t0001g0137 a0003c0023t0010g0236 a0004c0006t0003g0128 a0004c0006t0004g0135 a0004c0006t0004g0136 a0005c0008t0002g0050 a0013c0010t0002g0117	57	236	0.2415	-14	c.406 others(31): Show c.406+4800_406+4813delCGGCACACACAGAG	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	3/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178357766	ATGTATGT others(7): Show ATGTATGTGTGTATG	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0013 a0013	a0013c0010 a0013c0010	a0013c0010t0002 a0013c0010t0002	a0013c0010t0002g0117 a0013c0010t0002g0117	1	236	0.0042	-14	c.362 others(33): Show c.362-50861_362-50848delCATACACACATACA	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178357794	GTATGTGT others(7): Show GTATGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01891.hp1 HG02630.hp1 HG01167.hp1 HG01891.hp1 HG02630.hp1	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0003 a0003c0005 a0004c0006 a0002c0003 a0003c0005 a0004c0006	a0002c0003t0002 a0003c0005t0002 a0004c0006t0003 a0002c0003t0002 a0003c0005t0002 a0004c0006t0003	a0002c0003t0002g0112 a0003c0005t0002g0005 a0004c0006t0003g0130 a0002c0003t0002g0112 a0003c0005t0002g0005 a0004c0006t0003g0130	3	236	0.0127	-14	c.362 others(33): Show c.362-50889_362-50876delTACACACACACATA	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178358727	GTGTGTAT others(7): Show GTGTGTATGTGTATC	G G	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01346.hp2 HG01891.hp2 others(16): Show HG00738.hp2 HG01346.hp2 HG01891.hp2 HG01952.hp1 HG02055.hp1 HG02109.hp1 HG02258.hp2 HG02976.hp2 HG03041.hp2 HG03195.hp1 HG03239.hp2 HG03491.hp2 HG03831.hp1 HG06807.hp2 NA18906.hp1 NA18955.hp1 NA18971.hp1 NA19000.hp1 NA20300.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0001c0021 others(3): Show a0001c0001 a0001c0004 a0001c0021 a0002c0002 a0002c0003 a0003c0005	a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 others(9): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0004t0001 a0001c0004t0004 a0001c0004t0005 a0001c0021t0006 a0002c0002t0001 a0002c0003t0002 a0002c0003t0005 a0002c0003t0006 a0003c0005t0003	a0001c0001t0003g0116 a0001c0001t0003g0210 a0001c0001t0004g0011 others(16): Show a0001c0001t0003g0116 a0001c0001t0003g0210 a0001c0001t0004g0011 a0001c0001t0004g0069 a0001c0001t0005g0147 a0001c0004t0001g0070 a0001c0004t0004g0223 a0001c0004t0005g0106 a0001c0021t0006g0234 a0002c0002t0001g0025 a0002c0002t0001g0045 a0002c0002t0001g0046 a0002c0002t0001g0077 a0002c0002t0001g0104 a0002c0003t0002g0089 a0002c0003t0005g0066 a0002c0003t0005g0068 a0002c0003t0006g0229 a0003c0005t0003g0127	19	236	0.0805	-14	c.362 others(33): Show c.362-51822_362-51809delGATACACATACACA	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178408975	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02723.hp1 HG02280.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0003 a0001c0001t0005	a0001c0001t0003g0142 a0001c0001t0005g0133 a0001c0001t0003g0142 a0001c0001t0005g0133	2	236	0.0085	-14	c.362 others(35): Show c.362-102070_362-102057delGTGTGTGTGTGTGT	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178409009	CACACACA others(7): Show CACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0181 a0002c0002t0001g0181	1	236	0.0042	-14	c.362 others(35): Show c.362-102104_362-102091delATGTGTGTGTGTGT	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178489005	CTCTGCCC others(7): Show CTCTGCCCCTCAGGA	C C	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0095 a0001c0001t0005g0095	1	236	0.0042	-14	c.361 others(33): Show c.361+71663_361+71676delTCCTGAGGGGCAGA	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178498205	AATATATA others(7): Show AATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01256.hp2 HG01928.hp2 others(1): Show HG00423.hp2 HG01256.hp2 HG01928.hp2 HG01952.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0004 a0002c0002t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0001	a0001c0001t0002g0056 a0001c0001t0002g0148 a0001c0001t0004g0081 others(1): Show a0001c0001t0002g0056 a0001c0001t0002g0148 a0001c0001t0004g0081 a0002c0002t0001g0052	4	236	0.0170	-14	c.361 others(33): Show c.361+62463_361+62476delATATATATATATAT	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178517870	GTTCTTTT others(7): Show GTTCTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0081 a0001c0001t0004g0081	1	236	0.0042	-14	c.361 others(33): Show c.361+42798_361+42811delAAAAAAAAAAAGAA	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178517873	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0084 a0001c0001t0004g0084	1	236	0.0042	-14	c.361 others(33): Show c.361+42795_361+42808delAAAAAAAAAAAAAA	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	2/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178578045	GCATGCAC others(7): Show GCATGCACACACCCA	G G	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0146 a0002c0003t0005g0146	1	236	0.0042	-14	c.294 others(33): Show c.294+11845_294+11858delTGGGTGTGTGCATG	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	1/28			chr5	TogoVar
COL24A1_chr1_85724233_86161772	85764455	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01981.hp1 NA18961.hp1 NA18984.hp1 HG01981.hp1 NA18961.hp1 NA18984.hp1	a0006 a0025 a0046 a0006 a0025 a0046	a0006c0017 a0025c0033 a0046c0070 a0006c0017 a0025c0033 a0046c0070	a0006c0017t0006 a0025c0033t0001 a0046c0070t0002 a0006c0017t0006 a0025c0033t0001 a0046c0070t0002	a0006c0017t0006g0009 a0025c0033t0001g0231 a0046c0070t0002g0204 a0006c0017t0006g0009 a0025c0033t0001g0231 a0046c0070t0002g0204	3	238	0.0126	-14	c.437 others(33): Show c.4375-2903_4375-2890delGTGTGTGTGTGTGT	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	53/59			chr1	TogoVar
COL24A1_chr1_85724233_86161772	85788219	TAGCTGGG others(7): Show TAGCTGGGACTACAG	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02818.hp1 HG02109.hp2 HG02818.hp1	a0002 a0003 a0002 a0003	a0002c0003 a0003c0027 a0002c0003 a0003c0027	a0002c0003t0008 a0003c0027t0008 a0002c0003t0008 a0003c0027t0008	a0002c0003t0008g0150 a0003c0027t0008g0064 a0002c0003t0008g0150 a0003c0027t0008g0064	2	238	0.0084	-14	c.395 others(33): Show c.3952-1772_3952-1759delCTGTAGTCCCAGCT	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	47/59			chr1	TogoVar
COL24A1_chr1_85724233_86161772	85802048	AGTCTAGT others(7): Show AGTCTAGTTCAAACC	A A	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0003 a0001c0005t0003	a0001c0005t0003g0207 a0001c0005t0003g0207	1	238	0.0042	-14	c.395 others(35): Show c.3951+14726_3951+14739delGGTTTGAACTAGAC	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	47/59			chr1	TogoVar
COL24A1_chr1_85724233_86161772	85945002	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0007 a0007	a0007c0010 a0007c0010	a0007c0010t0004 a0007c0010t0004	a0007c0010t0004g0149 a0007c0010t0004g0149	1	238	0.0042	-14	c.256 others(35): Show c.2562+16233_2562+16246delAAAAAAAAAAAAAA	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	24/59			chr1	TogoVar
COL24A1_chr1_85724233_86161772	86005087	GGACAGTG others(7): Show GGACAGTGAAAGAGT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02109.hp1 NA18906.hp1 HG01243.hp1 HG02109.hp1 NA18906.hp1	a0004 a0004	a0004c0002 a0004c0002	a0004c0002t0001 a0004c0002t0002 a0004c0002t0004 a0004c0002t0001 a0004c0002t0002 a0004c0002t0004	a0004c0002t0001g0151 a0004c0002t0002g0140 a0004c0002t0004g0206 a0004c0002t0001g0151 a0004c0002t0002g0140 a0004c0002t0004g0206	3	238	0.0126	-14	c.231 others(35): Show c.2310+12050_2310+12063delACTCTTTCACTGTC	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	19/59			chr1	TogoVar
COL25A1_chr4_108803725_109307658	108966944	GGAAAGAA others(7): Show GGAAAGAAAGAAAAA	G G	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0063 a0001c0001t0002g0063	1	130	0.0077	-14	c.492 others(31): Show c.492+7409_492+7422delTTTTTCTTTCTTTC	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	8/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	108990229	AAAAAAAA others(7): Show AAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01884.hp1 HG01346.hp2 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0008 a0001c0001t0002 a0001c0003t0008	a0001c0001t0002g0117 a0001c0003t0008g0036 a0001c0001t0002g0117 a0001c0003t0008g0036	2	130	0.0154	-14	c.439 others(33): Show c.439-15684_439-15671delATATTTTTTTTTTT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	6/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	108990231	AAAAAAAA others(7): Show AAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG03453.hp2 HG03704.hp2 HG02896.hp2 HG03453.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0006 a0001c0002t0022 a0001c0004t0004 a0001c0001t0006 a0001c0002t0022 a0001c0004t0004	a0001c0001t0006g0076 a0001c0002t0022g0073 a0001c0004t0004g0027 a0001c0001t0006g0076 a0001c0002t0022g0073 a0001c0004t0004g0027	3	130	0.0231	-14	c.439 others(33): Show c.439-15686_439-15673delATATATTTTTTTTT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	6/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	108990233	AAAAAAAA others(7): Show AAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0129 a0001c0001t0002g0129	1	130	0.0077	-14	c.439 others(33): Show c.439-15688_439-15675delATATATATTTTTTT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	6/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	108990235	AAAAAATA others(7): Show AAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03579.hp1 HG02809.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0026 a0001c0002t0001 a0001c0001t0026 a0001c0002t0001	a0001c0001t0026g0046 a0001c0002t0001g0130 a0001c0001t0026g0046 a0001c0002t0001g0130	2	130	0.0154	-14	c.439 others(33): Show c.439-15690_439-15677delATATATATATTTTT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	6/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109000755	AAAAAAAA others(7): Show AAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0042 a0001c0002t0005g0042	1	130	0.0077	-14	c.438 others(31): Show c.438+9589_438+9602delCTTTTTTTTTTTTT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	6/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109008744	TACATGCG others(7): Show TACATGCGCGCGCAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00558.hp1 others(86): Show HG00140.hp1 HG00140.hp2 HG00558.hp1 HG00558.hp2 HG00639.hp2 HG00735.hp1 HG00735.hp2 HG01071.hp2 HG01109.hp1 HG01167.hp1 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01884.hp2 HG01891.hp1 HG01981.hp1 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03704.hp1 HG03710.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18941.hp2 NA18952.hp2 NA18998.hp1 NA18998.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19079.hp2 NA19086.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0002c0011 a0003c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0026 a0001c0001t0028 a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0008 a0001c0002t0010 a0001c0002t0013 a0001c0002t0021 a0001c0002t0022 a0001c0002t0025 a0001c0003t0001 a0001c0003t0004 a0001c0003t0024 a0001c0004t0001 a0001c0004t0002 a0001c0004t0029 a0001c0005t0005 a0001c0006t0015 a0001c0009t0002 a0002c0011t0007 a0003c0008t0003	a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0048 others(86): Show a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0048 a0001c0001t0001g0062 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0099 a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0002g0054 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0063 a0001c0001t0002g0071 a0001c0001t0002g0085 a0001c0001t0002g0091 a0001c0001t0002g0094 a0001c0001t0002g0100 a0001c0001t0002g0102 a0001c0001t0002g0105 a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0120 a0001c0001t0002g0126 a0001c0001t0002g0129 a0001c0001t0003g0005 a0001c0001t0003g0016 a0001c0001t0003g0018 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0033 a0001c0001t0004g0004 a0001c0001t0004g0007 a0001c0001t0004g0008 a0001c0001t0005g0077 a0001c0001t0005g0078 a0001c0001t0006g0049 a0001c0001t0006g0051 a0001c0001t0006g0064 a0001c0001t0006g0072 a0001c0001t0006g0076 a0001c0001t0011g0047 a0001c0001t0012g0096 a0001c0001t0014g0012 a0001c0001t0026g0046 a0001c0001t0028g0084 a0001c0002t0001g0038 a0001c0002t0001g0039 a0001c0002t0001g0052 a0001c0002t0001g0066 a0001c0002t0001g0098 a0001c0002t0001g0101 a0001c0002t0001g0110 a0001c0002t0001g0125 a0001c0002t0001g0130 a0001c0002t0003g0010 a0001c0002t0004g0011 a0001c0002t0004g0028 a0001c0002t0005g0065 a0001c0002t0005g0112 a0001c0002t0007g0115 a0001c0002t0008g0060 a0001c0002t0010g0013 a0001c0002t0010g0030 a0001c0002t0013g0067 a0001c0002t0013g0070 a0001c0002t0021g0082 a0001c0002t0022g0073 a0001c0002t0025g0050 a0001c0003t0001g0053 a0001c0003t0001g0055 a0001c0003t0001g0057 a0001c0003t0004g0001 a0001c0003t0024g0045 a0001c0004t0001g0040 a0001c0004t0001g0043 a0001c0004t0002g0083 a0001c0004t0029g0095 a0001c0005t0005g0122 a0001c0006t0015g0022 a0001c0009t0002g0097 a0002c0011t0007g0061 a0003c0008t0003g0034	89	130	0.6846	-14	c.438 others(31): Show c.438+1600_438+1613delGTGCGCGCGCATGT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	6/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109044088	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0125 a0001c0002t0001g0125	1	130	0.0077	-14	c.420 others(31): Show c.420+4066_420+4079delACACACACACACAC	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	5/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109211260	GTATATAT others(7): Show GTATATATATGAAAC	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01243.hp1 HG01884.hp2 others(9): Show HG00639.hp2 HG01243.hp1 HG01884.hp2 HG02809.hp1 HG02895.hp1 HG02896.hp2 HG02922.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03516.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0002t0001 a0001c0002t0021 a0001c0002t0022 a0001c0006t0015	a0001c0001t0001g0068 a0001c0001t0001g0081 a0001c0001t0001g0119 others(9): Show a0001c0001t0001g0068 a0001c0001t0001g0081 a0001c0001t0001g0119 a0001c0001t0002g0118 a0001c0001t0002g0126 a0001c0001t0002g0129 a0001c0001t0011g0044 a0001c0002t0001g0038 a0001c0002t0001g0052 a0001c0002t0021g0082 a0001c0002t0022g0073 a0001c0006t0015g0022	12	130	0.0923	-14	c.367 others(33): Show c.367+89309_367+89322delGTTTCATATATATA	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109211290	CTATATAT others(7): Show CTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03139.hp1 HG03516.hp2 HG02809.hp1 HG03139.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0011 a0001c0001t0002 a0001c0001t0011	a0001c0001t0002g0126 a0001c0001t0002g0129 a0001c0001t0011g0044 a0001c0001t0002g0126 a0001c0001t0002g0129 a0001c0001t0011g0044	3	130	0.0231	-14	c.367 others(33): Show c.367+89279_367+89292delTATATATATATATA	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109225996	TACACACA others(7): Show TACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0083 a0001c0004t0002g0083	1	130	0.0077	-14	c.367 others(33): Show c.367+74573_367+74586delGTGTGTGTGTGTGT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109256153	AAAAGAGT others(7): Show AAAAGAGTTTACCAT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01891.hp1 HG02895.hp1 others(8): Show HG01243.hp1 HG01891.hp1 HG02895.hp1 HG02896.hp2 HG02922.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03516.hp1 HG03579.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0005 a0001c0002t0022 a0001c0004t0001	a0001c0001t0001g0041 a0001c0001t0001g0068 a0001c0001t0001g0074 others(8): Show a0001c0001t0001g0041 a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0001g0119 a0001c0001t0002g0088 a0001c0001t0002g0118 a0001c0002t0001g0038 a0001c0002t0001g0052 a0001c0002t0005g0042 a0001c0002t0022g0073 a0001c0004t0001g0043	11	130	0.0846	-14	c.367 others(33): Show c.367+44416_367+44429delATGGTAAACTCTTT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109265518	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03195.hp2 HG03942.hp2 HG02486.hp2 HG03195.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 a0001c0001t0001 a0001c0001t0002 a0001c0004t0001	a0001c0001t0001g0121 a0001c0001t0002g0088 a0001c0004t0001g0040 a0001c0001t0001g0121 a0001c0001t0002g0088 a0001c0004t0001g0040	3	130	0.0231	-14	c.367 others(33): Show c.367+35051_367+35064delACACACACACACAC	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL26A1_chr7_101357875_101564024	101387740	ATATATAT others(7): Show ATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0109 a0001c0001t0014g0109	1	174	0.0058	-14	c.158 others(33): Show c.158+24564_158+24577delTTATATATATATAT	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL26A1_chr7_101357875_101564024	101473608	CCACACAC others(7): Show CCACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02055.hp2 HG03041.hp2 others(1): Show HG00280.hp2 HG02055.hp2 HG03041.hp2 HG03669.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0009 a0002c0003 others(1): Show a0001c0001 a0001c0009 a0002c0003 a0003c0010	a0001c0001t0008 a0001c0009t0003 a0002c0003t0001 others(1): Show a0001c0001t0008 a0001c0009t0003 a0002c0003t0001 a0003c0010t0005	a0001c0001t0008g0169 a0001c0009t0003g0026 a0002c0003t0001g0088 others(1): Show a0001c0001t0008g0169 a0001c0009t0003g0026 a0002c0003t0001g0088 a0003c0010t0005g0165	4	174	0.0230	-14	c.385 others(33): Show c.385+25854_385+25867delCACACACACACACA	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL26A1_chr7_101357875_101564024	101486268	ACAGACAG others(7): Show ACAGACAGCGATCTT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00621.hp2 HG00673.hp1 others(7): Show HG00323.hp2 HG00621.hp2 HG00673.hp1 HG01167.hp2 NA18942.hp2 NA18947.hp1 NA18963.hp1 NA18985.hp1 NA19005.hp1 NA19060.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003	a0001c0001t0002 a0001c0002t0018 a0001c0005t0002 others(2): Show a0001c0001t0002 a0001c0002t0018 a0001c0005t0002 a0001c0005t0012 a0002c0003t0001	a0001c0001t0002g0074 a0001c0001t0002g0080 a0001c0001t0002g0093 others(7): Show a0001c0001t0002g0074 a0001c0001t0002g0080 a0001c0001t0002g0093 a0001c0001t0002g0098 a0001c0001t0002g0101 a0001c0001t0002g0173 a0001c0002t0018g0045 a0001c0005t0002g0118 a0001c0005t0012g0082 a0002c0003t0001g0164	10	174	0.0575	-14	c.385 others(33): Show c.385+38485_385+38498delACAGCGATCTTCAG	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL26A1_chr7_101357875_101564024	101489754	CTCTCTTT others(7): Show CTCTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0007 a0001c0008t0007	a0001c0008t0007g0075 a0001c0008t0007g0075	1	174	0.0058	-14	c.385 others(33): Show c.385+41971_385+41984delCTTTCTTTCTTTCT	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL26A1_chr7_101357875_101564024	101517798	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0149 a0001c0005t0002g0149	1	174	0.0058	-14	c.386 others(33): Show c.386-15264_386-15251delTTTTTTTTTTTTTT	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL28A1_chr7_7352875_7540873	7400975	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0012 a0012	a0012c0016 a0012c0016	a0012c0016t0002 a0012c0016t0002	a0012c0016t0002g0123 a0012c0016t0002g0123	1	196	0.0051	-14	c.213 others(35): Show c.2136+16870_2136+16883delACACACACACACAC	COL28A1	ENSG00000215018.10	transcript	ENST00000399429.8	protein_coding	27/34			chr7	TogoVar
COL28A1_chr7_7352875_7540873	7522806	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(76): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01081.hp2 HG01167.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01978.hp2 HG02004.hp1 HG02056.hp2 HG02080.hp1 HG02083.hp2 HG02258.hp1 HG02258.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03579.hp1 HG03654.hp2 HG03669.hp2 HG03942.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18957.hp2 NA18969.hp1 NA19000.hp2 NA19007.hp1 NA19007.hp2 NA19011.hp1 NA19011.hp2 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19084.hp1 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0016 a0017 a0024 a0025 a0027 a0028 a0035	a0001c0001 a0001c0005 a0001c0007 others(16): Show a0001c0001 a0001c0005 a0001c0007 a0002c0002 a0002c0004 a0003c0003 a0004c0006 a0005c0010 a0006c0015 a0006c0030 a0007c0008 a0007c0032 a0016c0018 a0017c0020 a0024c0045 a0025c0046 a0027c0042 a0028c0036 a0035c0041	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0005t0001 a0001c0007t0003 a0002c0002t0001 a0002c0002t0002 a0002c0002t0006 a0002c0004t0003 a0003c0003t0002 a0003c0003t0004 a0004c0006t0002 a0005c0010t0001 a0006c0015t0002 a0006c0030t0003 a0007c0008t0003 a0007c0008t0006 a0007c0032t0003 a0016c0018t0001 a0017c0020t0001 a0024c0045t0001 a0025c0046t0001 a0027c0042t0002 a0028c0036t0010 a0035c0041t0001	a0001c0001t0001g0018 a0001c0001t0001g0034 a0001c0001t0001g0090 others(76): Show a0001c0001t0001g0018 a0001c0001t0001g0034 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0103 a0001c0001t0002g0107 a0001c0001t0002g0127 a0001c0001t0002g0135 a0001c0001t0002g0146 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0160 a0001c0001t0009g0131 a0001c0001t0009g0136 a0001c0005t0001g0098 a0001c0005t0001g0099 a0001c0005t0001g0100 a0001c0007t0003g0102 a0001c0007t0003g0148 a0002c0002t0001g0126 a0002c0002t0001g0147 a0002c0002t0002g0004 a0002c0002t0002g0015 a0002c0002t0002g0139 a0002c0002t0002g0141 a0002c0002t0006g0002 a0002c0004t0003g0088 a0003c0003t0002g0159 a0003c0003t0004g0193 a0003c0003t0004g0194 a0003c0003t0004g0195 a0003c0003t0004g0196 a0004c0006t0002g0005 a0004c0006t0002g0006 a0004c0006t0002g0007 a0005c0010t0001g0092 a0005c0010t0001g0105 a0006c0015t0002g0101 a0006c0030t0003g0065 a0007c0008t0003g0012 a0007c0008t0003g0013 a0007c0008t0006g0003 a0007c0032t0003g0014 a0016c0018t0001g0144 a0017c0020t0001g0086 a0024c0045t0001g0087 a0025c0046t0001g0142 a0027c0042t0002g0089 a0028c0036t0010g0001 a0035c0041t0001g0133	79	196	0.4031	-14	c.703 others(29): Show c.703-859_703-846delTTTTTTTTTTTTTT	COL28A1	ENSG00000215018.10	transcript	ENST00000399429.8	protein_coding	4/34			chr7	TogoVar
COL2A1_chr12_47967967_48009476	47987031	GACTCCAG others(7): Show GACTCCAGAGATGTC	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0184 a0001c0003t0001g0184	1	414	0.0024	-14	c.136 others(29): Show c.1365+33_1365+46delGACATCTCTGGAGT	COL2A1	ENSG00000139219.19	transcript	ENST00000380518.8	protein_coding	21/53			chr12	TogoVar
COL2A1_chr12_47967967_48009476	48008111	GAGAGAGA others(7): Show GAGAGAGAGAGAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 NA19004.hp2 NA19010.hp1 others(3): Show HG00741.hp1 NA19004.hp2 NA19010.hp1 NA19055.hp1 NA19066.hp1 NA19083.hp1	a0001 a0004 a0001 a0004	a0001c0006 a0001c0042 a0004c0010 a0001c0006 a0001c0042 a0004c0010	a0001c0006t0001 a0001c0042t0001 a0004c0010t0001 a0001c0006t0001 a0001c0042t0001 a0004c0010t0001	a0001c0006t0001g0003 a0001c0006t0001g0042 a0001c0042t0001g0186 others(2): Show a0001c0006t0001g0003 a0001c0006t0001g0042 a0001c0042t0001g0186 a0004c0010t0001g0050 a0004c0010t0001g0224	6	414	0.0145	-14	c.-38 others(25): Show c.-3804_-3791delTTCTCTCTCTCTCT	COL2A1	ENSG00000139219.19	transcript	ENST00000380518.8	protein_coding		3636		chr12	TogoVar

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