Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GABRA3_chrX_152161234_152456315	152360736	AATTAAAA others(8): Show AATTAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG03098.hp1 NA19240.hp2 HG03098.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0107 a0001c0001t0001g0023 a0001c0001t0001g0107	2	201	0.0100	-15	c.140 others(32): Show c.140+3680_140+3694delATTTTTTTTTTTAAT	GABRA3	ENSG00000011677.13	transcript	ENST00000370314.9	protein_coding	2/9			chrX	TogoVar
GABRA3_chrX_152161234_152456315	152404732	TTTATTAT others(8): Show TTTATTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01891.hp2 HG02056.hp1 others(11): Show HG01243.hp1 HG01891.hp2 HG02056.hp1 HG02258.hp1 HG02622.hp1 HG02717.hp1 HG02922.hp1 HG03139.hp1 HG03209.hp1 HG03486.hp1 HG03540.hp1 HG04115.hp1 HG06807.hp1 NA18966.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0059 a0001c0001t0001g0082 a0001c0001t0001g0096 others(11): Show a0001c0001t0001g0059 a0001c0001t0001g0082 a0001c0001t0001g0096 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0170 a0001c0001t0002g0201 a0001c0001t0003g0139 a0001c0001t0004g0178 a0001c0001t0005g0005	14	25	0.5600	-15	c.-26 others(34): Show c.-26-40151_-26-40137delTAATAATAATAATAA	GABRA3	ENSG00000011677.13	transcript	ENST00000370314.9	protein_coding	1/9			chrX	TogoVar
GABRA4_chr4_46913900_46998581	46925745	TATTATTA others(8): Show TATTATTATTATTATC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0046 a0002c0002t0046	a0002c0002t0046g0109 a0002c0002t0046g0109	1	368	0.0027	-15	c.24 others(26): Show c.2465_*2479delGATAATAATAATAAT	GABRA4	ENSG00000109158.11	transcript	ENST00000264318.4	protein_coding	9/9	2465		chr4	TogoVar
GABRB1_chr4_47026567_47431447	47045442	TATCATCA others(8): Show TATCATCATCATCATC	T T	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0127 a0001c0004t0003g0127	1	14	0.0714	-15	c.240 others(34): Show c.240+12990_240+13004delTCATCATCATCATCA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47123896	ATAATATA others(8): Show ATAATATATTATATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00642.hp2 HG00735.hp2 others(13): Show HG00280.hp1 HG00642.hp2 HG00735.hp2 HG01081.hp2 HG01099.hp2 HG01175.hp1 HG01255.hp1 HG01261.hp1 HG01361.hp2 HG01993.hp2 HG02717.hp2 HG03654.hp1 HG03688.hp2 HG04199.hp2 HG04204.hp1 NA20805.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0005 others(3): Show a0001c0001 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0003c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0003t0001 a0001c0003t0005 a0001c0005t0003 a0001c0006t0006 a0001c0008t0001 a0003c0012t0001	a0001c0001t0001g0101 a0001c0001t0001g0129 a0001c0001t0001g0131 others(13): Show a0001c0001t0001g0101 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0002g0043 a0001c0001t0002g0103 a0001c0001t0009g0102 a0001c0001t0009g0130 a0001c0003t0001g0027 a0001c0003t0005g0104 a0001c0003t0005g0134 a0001c0005t0003g0081 a0001c0006t0006g0112 a0001c0008t0001g0128 a0003c0012t0001g0044	16	156	0.1026	-15	c.241 others(34): Show c.241-37344_241-37330delTATATATTAATATAT	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47132392	TTTTGGTT others(8): Show TTTTGGTTTGGTTTGG	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03041.hp1 HG03579.hp1 others(1): Show HG02451.hp2 HG03041.hp1 HG03579.hp1 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0005 others(1): Show a0001c0002 a0001c0004 a0001c0005 a0001c0006	a0001c0002t0003 a0001c0004t0003 a0001c0005t0003 others(1): Show a0001c0002t0003 a0001c0004t0003 a0001c0005t0003 a0001c0006t0005	a0001c0002t0003g0150 a0001c0004t0003g0127 a0001c0005t0003g0006 others(1): Show a0001c0002t0003g0150 a0001c0004t0003g0127 a0001c0005t0003g0006 a0001c0006t0005g0036	4	7	0.5714	-15	c.241 others(34): Show c.241-28816_241-28802delTTTGGTTTGGTTTGG	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47401825	TATCTATC others(8): Show TATCTATCTATCTATC	T T	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG03195.hp1 HG02738.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0004 a0001c0001t0002 a0001c0002t0004	a0001c0001t0002g0071 a0001c0002t0004g0019 a0001c0001t0002g0071 a0001c0002t0004g0019	2	156	0.0128	-15	c.545 others(32): Show c.545-1477_545-1463delATCTATCTATCTATC	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47425477	TGATGATA others(8): Show TGATGATAGATAGATA	T T	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0127 a0001c0004t0003g0127	1	156	0.0064	-15	c.108 others(32): Show c.1081-193_1081-179delGATAGATAGATAGAT	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB2_chr5_161283436_161551725	161393299	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01943.hp1 HG01167.hp2 HG01943.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0019 a0001c0003t0019	a0001c0003t0019g0146 a0001c0003t0019g0149 a0001c0003t0019g0146 a0001c0003t0019g0149	2	6	0.3333	-15	c.541 others(34): Show c.541+17661_541+17675delTTTTTTTTTTTTTTT	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	5/9			chr5	TogoVar
GABRB3_chr15_26538552_26778066	26764172	AAAAAAAA others(8): Show AAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0052 a0001c0001t0030g0052	1	196	0.0051	-15	c.240 others(32): Show c.240+8215_240+8229delATATATATTTTTTTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764176	AAAAATAT others(8): Show AAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0026 a0001c0001t0027g0026	1	193	0.0052	-15	c.240 others(32): Show c.240+8211_240+8225delATATATATATATTTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764180	ATATATAT others(8): Show ATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0145 a0001c0001t0003g0145	1	195	0.0051	-15	c.240 others(32): Show c.240+8207_240+8221delATATATATATATATA	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRG1_chr4_46030769_46129054	46056150	TTAAAAAA others(8): Show TTAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	234	0.0043	-15	c.916 others(32): Show c.916+2052_916+2066delTTTTTTTTTTTTTTA	GABRG1	ENSG00000163285.8	transcript	ENST00000295452.5	protein_coding	7/8			chr4	TogoVar
GABRG3_chr15_26966181_27546984	26974843	TTTATTAT others(8): Show TTTATTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01884.hp2 HG02258.hp1 others(2): Show HG01496.hp1 HG01884.hp2 HG02258.hp1 HG02809.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0001c0013	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0006t0003 a0001c0013t0023	a0001c0001t0001g0073 a0001c0001t0004g0007 a0001c0002t0001g0009 others(2): Show a0001c0001t0001g0073 a0001c0001t0004g0007 a0001c0002t0001g0009 a0001c0006t0003g0008 a0001c0013t0023g0006	5	23	0.2174	-15	c.54- others(30): Show c.54-2126_54-2112delATTATTATTATTATT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	26978703	AATACCCA others(8): Show AATACCCACAATTTTT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02109.hp1 HG02698.hp1 others(9): Show HG01243.hp2 HG02109.hp1 HG02698.hp1 HG03017.hp1 HG03492.hp2 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG04115.hp1 NA18522.hp2 NA18906.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0034 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0034 a0001c0002t0001 a0001c0003t0001 a0001c0003t0014 a0001c0004t0002	a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0084 others(9): Show a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0084 a0001c0001t0034g0088 a0001c0002t0001g0027 a0001c0002t0001g0079 a0001c0002t0001g0083 a0001c0003t0001g0065 a0001c0003t0001g0066 a0001c0003t0014g0011 a0001c0004t0002g0015 a0001c0004t0002g0061	12	92	0.1304	-15	c.202 others(32): Show c.202+1556_202+1570delACCCACAATTTTTAT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRR3_chr3_97980102_98040315	98032063	CATAGTAT others(8): Show CATAGTATAGTATAGT	C C	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02027.hp2 HG02559.hp2 others(1): Show HG01981.hp2 HG02027.hp2 HG02559.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0016	a0001c0001t0002g0156 a0001c0001t0003g0155 a0001c0001t0004g0197 others(1): Show a0001c0001t0002g0156 a0001c0001t0003g0155 a0001c0001t0004g0197 a0001c0001t0016g0346	4	117	0.0342	-15	c.125 others(32): Show c.125+2785_125+2799delACTATACTATACTAT	GABRR3	ENSG00000183185.10	transcript	ENST00000472788.6	protein_coding	2/9			chr3	TogoVar
GAD1_chr2_170811887_170866151	170828090	CCTCCTCC others(8): Show CCTCCTCCTTCTGCTG	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02132.hp2 HG02451.hp2 others(3): Show HG01884.hp1 HG02132.hp2 HG02451.hp2 HG02818.hp2 HG02965.hp1 HG03139.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0001c0001t0006 a0002c0003t0001 a0001c0001t0003 a0001c0001t0006 a0002c0003t0001	a0001c0001t0003g0291 a0001c0001t0006g0242 a0001c0001t0006g0243 others(3): Show a0001c0001t0003g0291 a0001c0001t0006g0242 a0001c0001t0006g0243 a0001c0001t0006g0244 a0001c0001t0006g0306 a0002c0003t0001g0366	6	410	0.0146	-15	c.146 others(32): Show c.146-1384_146-1370delCTCCTCCTTCTGCTG	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	3/16			chr2	TogoVar
GADL1_chr3_30721197_30899661	30816530	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02056.hp1 HG02280.hp1 others(7): Show HG01981.hp2 HG02056.hp1 HG02280.hp1 HG03130.hp1 HG03669.hp2 HG03704.hp2 HG04199.hp1 NA19068.hp1 NA20129.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0017	a0001c0001t0001g0097 a0001c0001t0001g0181 a0001c0001t0001g0241 others(7): Show a0001c0001t0001g0097 a0001c0001t0001g0181 a0001c0001t0001g0241 a0001c0001t0002g0202 a0001c0001t0002g0214 a0001c0001t0003g0061 a0001c0001t0003g0172 a0001c0001t0003g0207 a0001c0001t0003g0242 a0001c0001t0017g0002	10	45	0.2222	-15	c.105 others(36): Show c.1051-15457_1051-15443delAAAAAAAAAAAAAAA	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	11/14			chr3	TogoVar
GAGE10_chrX_49298646_49324841	49300477	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(107): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00642.hp1 HG00735.hp1 HG01070.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp1 HG02451.hp2 HG02622.hp2 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02818.hp2 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18981.hp2 NA18984.hp1 NA18989.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19006.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19077.hp2 NA19081.hp1 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA20805.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0004 a0003c0003t0003 a0001c0001t0001 a0001c0001t0004 a0003c0003t0003	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(38): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0004g0094 a0003c0003t0003g0100	110	206	0.5340	-15	c.-32 others(26): Show c.-3284_-3270delTTTTTTTTTTTTTTT	GAGE10	ENSG00000215274.6	transcript	ENST00000407599.4	protein_coding		3168		chrX	TogoVar
GAGE12H_chrX_49574949_49592301	49586009	TTTATTTA others(8): Show TTTATTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0032 a0001c0002t0003g0032	1	116	0.0086	-15	c.332 others(32): Show c.332-1166_332-1152delTTATTATTTATTTAT	GAGE12H	ENSG00000224902.6	transcript	ENST00000381722.2	protein_coding	4/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAGE1_chrX_49594020_49613538	49611720	CTTTTATT others(8): Show CTTTTATTTTATTTTA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18978.hp2 NA18988.hp1 NA19010.hp2 others(1): Show NA18978.hp2 NA18988.hp1 NA19010.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0101 a0001c0001t0001g0001 a0001c0001t0001g0101	4	106	0.0377	-15	c.57 others(26): Show c.5706_*5720delTTTTATTTTATTTTA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding		3183		chrX	TogoVar
GALK2_chr15_49165247_49336882	49277137	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00408.hp2 others(18): Show HG00099.hp2 HG00323.hp1 HG00408.hp2 HG01081.hp2 HG01256.hp2 HG03195.hp1 HG03453.hp2 HG03669.hp2 HG03942.hp2 HG04228.hp1 NA18940.hp1 NA18961.hp2 NA18969.hp2 NA18972.hp2 NA18973.hp2 NA18979.hp2 NA19005.hp1 NA19065.hp2 NA19085.hp1 NA19087.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0009 a0001c0001t0035 a0001c0001t0037 a0001c0001t0045	a0001c0001t0001g0259 a0001c0001t0001g0279 a0001c0001t0001g0328 others(18): Show a0001c0001t0001g0259 a0001c0001t0001g0279 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0339 a0001c0001t0001g0344 a0001c0001t0002g0209 a0001c0001t0006g0210 a0001c0001t0006g0222 a0001c0001t0006g0224 a0001c0001t0006g0227 a0001c0001t0006g0233 a0001c0001t0006g0235 a0001c0001t0006g0236 a0001c0001t0009g0217 a0001c0001t0009g0218 a0001c0001t0009g0241 a0001c0001t0035g0244 a0001c0001t0037g0219 a0001c0001t0045g0307	21	22	0.9545	-15	c.505 others(32): Show c.505-4815_505-4801delTTTTTTTTTTTTTTT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALK2_chr15_49165247_49336882	49321224	TAAATGAG others(8): Show TAAATGAGAACAGCAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00408.hp2 HG00673.hp1 others(62): Show HG00140.hp2 HG00408.hp2 HG00673.hp1 HG01109.hp2 HG01255.hp2 HG01891.hp1 HG01943.hp1 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02451.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp2 HG02647.hp2 HG02735.hp2 HG02738.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp1 HG03486.hp1 HG03516.hp1 HG03688.hp2 HG03831.hp1 HG03942.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18942.hp2 NA18945.hp1 NA18950.hp2 NA18961.hp2 NA18969.hp2 NA18971.hp1 NA18973.hp2 NA18979.hp2 NA18980.hp1 NA18986.hp2 NA18999.hp2 NA19005.hp1 NA19009.hp2 NA19011.hp1 NA19030.hp1 NA19060.hp1 NA19065.hp2 NA19068.hp1 NA19080.hp1 NA19085.hp1 NA19088.hp2 NA19240.hp2 NA20300.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0001t0006 a0001c0001t0009 others(10): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0009 a0001c0001t0015 a0001c0001t0020 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0037 a0001c0005t0048	a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 others(62): Show a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0002g0076 a0001c0001t0002g0079 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0141 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0209 a0001c0001t0002g0242 a0001c0001t0006g0210 a0001c0001t0006g0211 a0001c0001t0006g0212 a0001c0001t0006g0220 a0001c0001t0006g0221 a0001c0001t0006g0222 a0001c0001t0006g0223 a0001c0001t0006g0224 a0001c0001t0006g0226 a0001c0001t0006g0227 a0001c0001t0006g0228 a0001c0001t0006g0229 a0001c0001t0006g0232 a0001c0001t0006g0233 a0001c0001t0006g0234 a0001c0001t0006g0235 a0001c0001t0006g0236 a0001c0001t0006g0237 a0001c0001t0006g0238 a0001c0001t0006g0239 a0001c0001t0006g0243 a0001c0001t0009g0058 a0001c0001t0009g0139 a0001c0001t0009g0214 a0001c0001t0009g0215 a0001c0001t0009g0216 a0001c0001t0009g0217 a0001c0001t0009g0218 a0001c0001t0009g0240 a0001c0001t0009g0241 a0001c0001t0015g0074 a0001c0001t0015g0077 a0001c0001t0015g0080 a0001c0001t0020g0052 a0001c0001t0020g0164 a0001c0001t0028g0230 a0001c0001t0029g0213 a0001c0001t0030g0059 a0001c0001t0033g0225 a0001c0001t0034g0231 a0001c0001t0035g0244 a0001c0001t0037g0219 a0001c0005t0048g0075	65	346	0.1879	-15	c.116 others(34): Show c.1169+1421_1169+1435delAATGAGAACAGCAAA	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALM_chr2_38661114_38739765	38665483	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG02630.hp1 HG02895.hp1 others(3): Show HG02451.hp1 HG02630.hp1 HG02895.hp1 HG02896.hp2 HG02922.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 a0001c0001t0001 a0001c0001t0002 a0001c0001t0015	a0001c0001t0001g0313 a0001c0001t0002g0307 a0001c0001t0002g0311 others(3): Show a0001c0001t0001g0313 a0001c0001t0002g0307 a0001c0001t0002g0311 a0001c0001t0002g0312 a0001c0001t0015g0308 a0001c0001t0015g0309	6	12	0.5000	-15	c.-67 others(24): Show c.-678_-664delTTTTTTTTTTTTTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding		630		chr2	TogoVar
GALM_chr2_38661114_38739765	38675540	TTTTTGTG others(8): Show TTTTTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0229 a0001c0001t0002g0229	1	317	0.0032	-15	c.191 others(30): Show c.191-370_191-356delTTTGTGTGTGTGTGT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38675542	TTTGTGTG others(8): Show TTTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0256 a0002c0002t0001g0256	1	306	0.0033	-15	c.191 others(30): Show c.191-368_191-354delTGTGTGTGTGTGTGT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38675544	TGTGTGTG others(8): Show TGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0013 a0002c0002t0013	a0002c0002t0013g0209 a0002c0002t0013g0209	1	322	0.0031	-15	c.191 others(30): Show c.191-367_191-353delGTGTGTGTGTGTGTG	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	1/6			chr2	TogoVar
GALM_chr2_38661114_38739765	38703080	ATATATAT others(8): Show ATATATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0030 a0001c0001t0002g0030	1	325	0.0031	-15	c.634 others(34): Show c.634+13188_634+13202delATATATATATATTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703084	ATATATAT others(8): Show ATATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01258.hp2 HG01516.hp1 others(1): Show HG01192.hp1 HG01258.hp2 HG01516.hp1 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0013 a0001c0001t0002g0034 a0001c0001t0002g0037 others(1): Show a0001c0001t0001g0013 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0002g0188	4	308	0.0130	-15	c.634 others(34): Show c.634+13192_634+13206delATATATATTTTTTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703086	ATATATAT others(8): Show ATATATATTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01081.hp2 HG01167.hp1 others(4): Show HG00639.hp2 HG01081.hp2 HG01167.hp1 HG01934.hp1 NA18747.hp2 NA18950.hp2 NA18970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0027 a0001c0001t0002 a0001c0001t0027	a0001c0001t0002g0003 a0001c0001t0002g0021 a0001c0001t0002g0022 others(3): Show a0001c0001t0002g0003 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0033 a0001c0001t0002g0035 a0001c0001t0027g0031	7	279	0.0251	-15	c.634 others(34): Show c.634+13194_634+13208delATATATTTTTTTTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38708107	AAAATTAA others(8): Show AAAATTAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp2 HG06807.hp2 HG02895.hp2 HG02897.hp2 HG06807.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0014 a0002c0002t0018 a0002c0002t0014 a0002c0002t0018	a0002c0002t0014g0151 a0002c0002t0014g0152 a0002c0002t0018g0012 a0002c0002t0014g0151 a0002c0002t0014g0152 a0002c0002t0018g0012	3	143	0.0210	-15	c.634 others(34): Show c.634+18217_634+18231delTTAAAATAAAATAAA	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNS_chr16_88808734_88861947	88825221	TGGGTGTC others(8): Show TGGGTGTCTGGGGCTG	T T	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	402	0.0025	-15	c.114 others(32): Show c.1140-367_1140-353delCAGCCCCAGACACCC	GALNS	ENSG00000141012.13	transcript	ENST00000268695.10	protein_coding	10/13			chr16	TogoVar
GALNT10_chr5_154185733_154425984	154187470	CTATTCAT others(8): Show CTATTCATAGCAACAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp1 HG02145.hp1 HG02280.hp1 others(3): Show HG02109.hp1 HG02145.hp1 HG02280.hp1 HG02630.hp1 HG03471.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0014 a0001c0016	a0001c0001t0021 a0001c0002t0001 a0001c0002t0045 others(3): Show a0001c0001t0021 a0001c0002t0001 a0001c0002t0045 a0001c0005t0005 a0001c0014t0003 a0001c0016t0005	a0001c0001t0021g0131 a0001c0002t0001g0061 a0001c0002t0045g0150 others(3): Show a0001c0001t0021g0131 a0001c0002t0001g0061 a0001c0002t0045g0150 a0001c0005t0005g0060 a0001c0014t0003g0001 a0001c0016t0005g0149	6	234	0.0256	-15	c.-33 others(26): Show c.-3396_-3382delTATTCATAGCAACAT	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding		3262		chr5	TogoVar
GALNT11_chr7_152020674_152127340	152113712	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01109.hp1 HG02074.hp1 others(2): Show HG00280.hp1 HG01109.hp1 HG02074.hp1 HG03471.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0001t0001 a0001c0001t0002 a0001c0001t0011	a0001c0001t0001g0127 a0001c0001t0001g0253 a0001c0001t0002g0180 others(2): Show a0001c0001t0001g0127 a0001c0001t0001g0253 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0011g0162	5	13	0.3846	-15	c.123 others(32): Show c.1233+342_1233+356delTTTTTTTTTTTTTTT	GALNT11	ENSG00000178234.13	transcript	ENST00000430044.7	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT13_chr2_153866922_154458979	154043415	TATATATA others(8): Show TATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00642.hp2 HG01081.hp2 others(20): Show HG00140.hp1 HG00642.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01256.hp2 HG01258.hp1 HG01261.hp2 HG01358.hp2 HG01516.hp2 HG01978.hp2 HG02080.hp1 HG02523.hp1 HG02698.hp2 HG02735.hp1 HG03490.hp2 HG03834.hp1 HG04199.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0014 a0001c0001t0021 a0001c0001t0026 a0001c0001t0032 a0001c0001t0039 a0001c0001t0065	a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0002g0101 others(20): Show a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0002g0101 a0001c0001t0002g0103 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0139 a0001c0001t0006g0104 a0001c0001t0006g0108 a0001c0001t0006g0126 a0001c0001t0006g0137 a0001c0001t0014g0136 a0001c0001t0014g0141 a0001c0001t0021g0143 a0001c0001t0021g0214 a0001c0001t0026g0138 a0001c0001t0032g0079 a0001c0001t0039g0102 a0001c0001t0065g0059	23	182	0.1264	-15	c.143 others(34): Show c.143-96921_143-96907delATATATATATATATA	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	3/12			chr2	TogoVar
GALNT13_chr2_153866922_154458979	154104863	ACTGCCTC others(8): Show ACTGCCTCAGTTCAGG	A A	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02451.hp1 HG03486.hp1 HG01169.hp1 HG02451.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0072 a0001c0001t0073 a0001c0001t0013 a0001c0001t0072 a0001c0001t0073	a0001c0001t0013g0151 a0001c0001t0072g0085 a0001c0001t0073g0086 a0001c0001t0013g0151 a0001c0001t0072g0085 a0001c0001t0073g0086	3	212	0.0142	-15	c.143 others(34): Show c.143-35456_143-35442delGCCTCAGTTCAGGCT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154270681	ATTAGTAA others(8): Show ATTAGTAAATAAAATT	A A	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0075 a0001c0001t0075	a0001c0001t0075g0087 a0001c0001t0075g0087	1	212	0.0047	-15	c.975 others(34): Show c.975+11544_975+11558delTTAGTAAATAAAATT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	8/12			chr2	TogoVar
GALNT13_chr2_153866922_154458979	154351682	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01175.hp2 HG02738.hp2 others(3): Show HG00735.hp2 HG01175.hp2 HG02738.hp2 HG02965.hp2 HG03209.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(3): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0024 a0001c0001t0048 a0001c0001t0063	a0001c0001t0002g0148 a0001c0001t0005g0097 a0001c0001t0006g0137 others(3): Show a0001c0001t0002g0148 a0001c0001t0005g0097 a0001c0001t0006g0137 a0001c0001t0024g0011 a0001c0001t0048g0160 a0001c0001t0063g0074	6	9	0.6667	-15	c.115 others(36): Show c.1157-44285_1157-44271delAAAAAAAAAAAAAAA	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154354405	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00642.hp1 others(64): Show HG00099.hp2 HG00280.hp1 HG00642.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01257.hp1 HG01346.hp1 HG01358.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp2 HG01981.hp2 HG02040.hp1 HG02055.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp2 HG02280.hp1 HG02486.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp2 HG02965.hp1 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03225.hp1 HG03490.hp2 HG03491.hp1 HG03710.hp2 HG03834.hp1 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18947.hp2 NA18975.hp2 NA18998.hp2 NA19004.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(38): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0024 a0001c0001t0025 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0047 a0001c0001t0049 a0001c0001t0053 a0001c0001t0056 a0001c0001t0058 a0001c0001t0059 a0001c0001t0065 a0001c0001t0068 a0001c0001t0069 a0001c0001t0074 a0001c0001t0075 a0001c0001t0078	a0001c0001t0001g0007 a0001c0001t0001g0021 a0001c0001t0001g0046 others(64): Show a0001c0001t0001g0007 a0001c0001t0001g0021 a0001c0001t0001g0046 a0001c0001t0002g0101 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0003g0016 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0058 a0001c0001t0004g0001 a0001c0001t0004g0002 a0001c0001t0004g0189 a0001c0001t0005g0120 a0001c0001t0006g0108 a0001c0001t0006g0126 a0001c0001t0006g0140 a0001c0001t0007g0196 a0001c0001t0007g0207 a0001c0001t0008g0015 a0001c0001t0008g0017 a0001c0001t0008g0020 a0001c0001t0008g0029 a0001c0001t0009g0083 a0001c0001t0009g0096 a0001c0001t0010g0191 a0001c0001t0010g0200 a0001c0001t0011g0093 a0001c0001t0011g0095 a0001c0001t0012g0179 a0001c0001t0012g0180 a0001c0001t0012g0182 a0001c0001t0013g0151 a0001c0001t0013g0152 a0001c0001t0013g0162 a0001c0001t0015g0014 a0001c0001t0016g0163 a0001c0001t0017g0161 a0001c0001t0018g0153 a0001c0001t0018g0170 a0001c0001t0020g0121 a0001c0001t0024g0032 a0001c0001t0025g0092 a0001c0001t0031g0088 a0001c0001t0031g0089 a0001c0001t0032g0079 a0001c0001t0033g0060 a0001c0001t0035g0094 a0001c0001t0036g0084 a0001c0001t0037g0113 a0001c0001t0043g0213 a0001c0001t0044g0156 a0001c0001t0045g0211 a0001c0001t0047g0129 a0001c0001t0049g0212 a0001c0001t0053g0030 a0001c0001t0056g0150 a0001c0001t0058g0033 a0001c0001t0059g0045 a0001c0001t0065g0059 a0001c0001t0068g0177 a0001c0001t0069g0171 a0001c0001t0074g0070 a0001c0001t0075g0087 a0001c0001t0078g0075	67	68	0.9853	-15	c.115 others(36): Show c.1157-41561_1157-41547delTTTTTTTTTTTTTTT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154364642	GTTGTTTT others(8): Show GTTGTTTTGTTTTGTT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(76): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00642.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01123.hp1 HG01169.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01516.hp1 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01981.hp2 HG02080.hp1 HG02129.hp1 HG02129.hp2 HG02273.hp2 HG02280.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02698.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03017.hp1 HG03130.hp2 HG03139.hp2 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03540.hp1 HG03669.hp2 HG03688.hp2 HG03710.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp1 NA18747.hp2 NA18906.hp2 NA18953.hp1 NA18953.hp2 NA19006.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19083.hp2 NA19240.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(36): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0036 a0001c0001t0037 a0001c0001t0039 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0047 a0001c0001t0049 a0001c0001t0050 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0067 a0001c0001t0078 a0001c0001t0079	a0001c0001t0001g0041 a0001c0001t0001g0051 a0001c0001t0003g0003 others(76): Show a0001c0001t0001g0041 a0001c0001t0001g0051 a0001c0001t0003g0003 a0001c0001t0003g0008 a0001c0001t0003g0016 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0058 a0001c0001t0005g0122 a0001c0001t0006g0104 a0001c0001t0006g0106 a0001c0001t0006g0107 a0001c0001t0006g0126 a0001c0001t0006g0137 a0001c0001t0007g0190 a0001c0001t0007g0196 a0001c0001t0008g0015 a0001c0001t0008g0017 a0001c0001t0008g0020 a0001c0001t0008g0029 a0001c0001t0008g0040 a0001c0001t0008g0042 a0001c0001t0008g0056 a0001c0001t0008g0057 a0001c0001t0009g0123 a0001c0001t0011g0082 a0001c0001t0011g0119 a0001c0001t0012g0179 a0001c0001t0012g0180 a0001c0001t0013g0151 a0001c0001t0013g0162 a0001c0001t0013g0166 a0001c0001t0014g0141 a0001c0001t0014g0145 a0001c0001t0014g0146 a0001c0001t0015g0012 a0001c0001t0015g0147 a0001c0001t0016g0163 a0001c0001t0016g0169 a0001c0001t0016g0173 a0001c0001t0016g0176 a0001c0001t0018g0159 a0001c0001t0018g0165 a0001c0001t0019g0078 a0001c0001t0019g0080 a0001c0001t0021g0143 a0001c0001t0023g0063 a0001c0001t0023g0064 a0001c0001t0023g0065 a0001c0001t0024g0011 a0001c0001t0024g0025 a0001c0001t0024g0032 a0001c0001t0025g0091 a0001c0001t0025g0092 a0001c0001t0026g0144 a0001c0001t0027g0009 a0001c0001t0029g0167 a0001c0001t0030g0073 a0001c0001t0031g0088 a0001c0001t0031g0089 a0001c0001t0036g0084 a0001c0001t0037g0113 a0001c0001t0039g0102 a0001c0001t0043g0213 a0001c0001t0044g0156 a0001c0001t0045g0211 a0001c0001t0047g0129 a0001c0001t0049g0212 a0001c0001t0050g0155 a0001c0001t0054g0006 a0001c0001t0055g0067 a0001c0001t0056g0150 a0001c0001t0067g0004 a0001c0001t0078g0075 a0001c0001t0079g0090	79	101	0.7822	-15	c.115 others(36): Show c.1157-31315_1157-31301delTTTTGTTTTGTTTTG	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT14_chr2_30905467_31143440	30912810	CAGAGCAC others(8): Show CAGAGCACATGAGACT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0030 a0002c0003t0001g0030	1	224	0.0045	-15	c.138 others(32): Show c.1381-483_1381-469delAGTCTCATGTGCTCT	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	13/14			chr2	TogoVar
GALNT14_chr2_30905467_31143440	31038082	ATATTTTT others(8): Show ATATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02886.hp2 NA18906.hp1 HG00558.hp1 HG02886.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0022 a0001c0001t0005g0187 a0001c0001t0005g0190 a0001c0001t0001g0022 a0001c0001t0005g0187 a0001c0001t0005g0190	3	224	0.0134	-15	c.130 others(34): Show c.130-45090_130-45076delAAAAAAAAAAAAATA	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	1/14			chr2	TogoVar
GALNT15_chr3_16169680_16235165	16207529	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00642.hp1 others(45): Show HG00140.hp1 HG00280.hp2 HG00642.hp1 HG00738.hp2 HG01069.hp1 HG01071.hp2 HG01081.hp1 HG01109.hp2 HG01167.hp1 HG01169.hp1 HG01257.hp1 HG01261.hp1 HG01358.hp1 HG01516.hp1 HG01891.hp2 HG02145.hp1 HG02258.hp1 HG02280.hp2 HG02572.hp2 HG02647.hp1 HG02683.hp2 HG02895.hp1 HG03041.hp1 HG03139.hp2 HG03225.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp2 HG04184.hp2 HG04199.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18957.hp2 NA18961.hp1 NA19000.hp2 NA19003.hp1 NA19043.hp1 NA19043.hp2 NA19067.hp1 NA19068.hp2 NA19072.hp1 NA19083.hp2 NA19085.hp2 NA19088.hp2 NA20300.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0013	a0001c0001 a0001c0002 a0001c0007 others(10): Show a0001c0001 a0001c0002 a0001c0007 a0001c0021 a0001c0026 a0002c0003 a0002c0010 a0002c0013 a0003c0004 a0003c0009 a0003c0011 a0006c0020 a0013c0029	a0001c0001t0001 a0001c0001t0006 a0001c0001t0016 others(18): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0016 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0002t0013 a0001c0002t0032 a0001c0002t0034 a0001c0007t0008 a0001c0021t0020 a0001c0026t0020 a0002c0003t0001 a0002c0010t0011 a0002c0013t0005 a0003c0004t0006 a0003c0009t0001 a0003c0009t0006 a0003c0011t0006 a0006c0020t0006 a0013c0029t0005	a0001c0001t0001g0007 a0001c0001t0001g0244 a0001c0001t0006g0082 others(44): Show a0001c0001t0001g0007 a0001c0001t0001g0244 a0001c0001t0006g0082 a0001c0001t0016g0254 a0001c0002t0003g0109 a0001c0002t0005g0012 a0001c0002t0005g0107 a0001c0002t0005g0112 a0001c0002t0005g0123 a0001c0002t0005g0139 a0001c0002t0005g0146 a0001c0002t0005g0149 a0001c0002t0005g0150 a0001c0002t0005g0151 a0001c0002t0005g0153 a0001c0002t0005g0156 a0001c0002t0005g0159 a0001c0002t0007g0009 a0001c0002t0007g0027 a0001c0002t0007g0028 a0001c0002t0013g0338 a0001c0002t0013g0339 a0001c0002t0013g0340 a0001c0002t0013g0342 a0001c0002t0032g0067 a0001c0002t0034g0152 a0001c0007t0008g0172 a0001c0021t0020g0065 a0001c0026t0020g0052 a0002c0003t0001g0017 a0002c0003t0001g0135 a0002c0010t0011g0062 a0002c0010t0011g0312 a0002c0013t0005g0181 a0003c0004t0006g0319 a0003c0004t0006g0321 a0003c0004t0006g0322 a0003c0009t0001g0049 a0003c0009t0006g0046 a0003c0009t0006g0047 a0003c0009t0006g0048 a0003c0011t0006g0040 a0003c0011t0006g0042 a0003c0011t0006g0043 a0006c0020t0006g0051 a0006c0020t0006g0053 a0013c0029t0005g0106	48	386	0.1244	-15	c.912 others(30): Show c.912-973_912-959delAAAAAAAAAAAAAAT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding	3/9			chr3	TogoVar
GALNT16_chr14_69255158_69359466	69296720	CAGATAGA others(8): Show CAGATAGATGATAGAT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00609.hp2 HG00621.hp2 others(35): Show HG00408.hp2 HG00609.hp2 HG00621.hp2 HG01074.hp1 HG02015.hp1 HG02129.hp2 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02523.hp2 HG02630.hp2 HG02683.hp2 HG03017.hp2 HG03098.hp1 HG03490.hp1 HG03492.hp1 HG03579.hp2 HG03688.hp2 HG03831.hp2 HG04184.hp2 NA18944.hp2 NA18945.hp2 NA18948.hp1 NA18957.hp1 NA18968.hp2 NA18969.hp1 NA18975.hp1 NA18982.hp2 NA18995.hp1 NA19007.hp1 NA19007.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp2 NA19068.hp1 NA19077.hp1 NA19085.hp2 NA19087.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0009	a0001c0001 a0001c0003 a0001c0009 others(3): Show a0001c0001 a0001c0003 a0001c0009 a0002c0002 a0004c0006 a0009c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 a0001c0001t0018 a0001c0001t0024 a0001c0001t0028 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0009t0001 a0002c0002t0001 a0002c0002t0002 a0004c0006t0003 a0009c0012t0001	a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0118 others(34): Show a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0153 a0001c0001t0001g0282 a0001c0001t0002g0107 a0001c0001t0002g0110 a0001c0001t0002g0131 a0001c0001t0004g0003 a0001c0001t0008g0128 a0001c0001t0012g0022 a0001c0001t0018g0134 a0001c0001t0024g0097 a0001c0001t0028g0109 a0001c0003t0001g0105 a0001c0003t0002g0108 a0001c0003t0003g0098 a0001c0003t0003g0103 a0001c0003t0003g0113 a0001c0003t0003g0117 a0001c0003t0003g0122 a0001c0003t0003g0221 a0001c0003t0003g0224 a0001c0009t0001g0281 a0002c0002t0001g0111 a0002c0002t0002g0106 a0004c0006t0003g0112 a0004c0006t0003g0220 a0004c0006t0003g0223 a0009c0012t0001g0119	38	300	0.1267	-15	c.178 others(34): Show c.178-23982_178-23968delGATAGATAGATAGAT	GALNT16	ENSG00000100626.17	transcript	ENST00000448469.8	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr14	TogoVar
GALNT17_chr7_71127144_71718599	71486334	AAATAATA others(8): Show AAATAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG03492.hp2 HG03704.hp1 others(2): Show HG02129.hp2 HG03492.hp2 HG03704.hp1 NA19060.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0003t0014	a0001c0001t0001g0039 a0001c0001t0003g0001 a0001c0001t0007g0059 others(2): Show a0001c0001t0001g0039 a0001c0001t0003g0001 a0001c0001t0007g0059 a0001c0001t0009g0063 a0001c0003t0014g0070	5	7	0.7143	-15	c.962 others(34): Show c.962+65270_962+65284delATAATAATAATAATA	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71540093	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0002 a0001c0001t0003g0002	1	6	0.1667	-15	c.963 others(34): Show c.963-31171_963-31157delTTTTTTTTTTTTTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71564273	CTTTTCTT others(8): Show CTTTTCTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0050 a0001c0001t0005g0050	1	76	0.0132	-15	c.963 others(32): Show c.963-7007_963-6993delCTTTTTTTTTTTTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71593149	CAATAATA others(8): Show CAATAATAATAATAAT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp1 HG00438.hp2 others(35): Show HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01106.hp1 HG01106.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG02040.hp1 HG02040.hp2 HG02129.hp2 HG02922.hp2 HG02976.hp2 HG03490.hp2 HG03492.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG04228.hp2 NA18983.hp1 NA18983.hp2 NA19000.hp1 NA19000.hp2 NA19060.hp1 NA19060.hp2 NA20129.hp1 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0002c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0002t0003 a0001c0002t0007 a0001c0002t0008 a0001c0002t0010 a0001c0003t0002 a0001c0003t0014 a0001c0004t0003 a0001c0004t0004 a0001c0007t0020 a0002c0010t0003	a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0041 others(35): Show a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0041 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0003g0003 a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0035 a0001c0001t0005g0054 a0001c0001t0006g0056 a0001c0001t0006g0057 a0001c0001t0006g0064 a0001c0001t0006g0066 a0001c0001t0007g0059 a0001c0001t0007g0062 a0001c0001t0009g0063 a0001c0001t0011g0036 a0001c0001t0011g0040 a0001c0001t0011g0049 a0001c0001t0012g0008 a0001c0001t0012g0012 a0001c0001t0012g0014 a0001c0001t0013g0075 a0001c0001t0015g0076 a0001c0001t0016g0043 a0001c0002t0003g0004 a0001c0002t0003g0006 a0001c0002t0007g0060 a0001c0002t0008g0025 a0001c0002t0010g0074 a0001c0003t0002g0067 a0001c0003t0014g0068 a0001c0003t0014g0070 a0001c0004t0003g0013 a0001c0004t0004g0030 a0001c0007t0020g0005 a0002c0010t0003g0009	38	39	0.9744	-15	c.108 others(36): Show c.1080+21765_1080+21779delTAATAATAATAATAA	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71680083	CCTCCCTC others(8): Show CCTCCCTCTCTCCCTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0017 a0001c0002t0019g0017	1	76	0.0132	-15	c.150 others(34): Show c.1500+2779_1500+2793delTCCCTCTCTCCCTTC	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT18_chr11_11265877_11627005	11510531	CAAGGCAC others(8): Show CAAGGCACTCATGCCT	C C	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0248 a0001c0001t0001g0248	1	258	0.0039	-15	c.236 others(34): Show c.236-61610_236-61596delAGGCATGAGTGCCTT	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar

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