Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LARGE1_chr22_33267509_33925476	33457293	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp2 HG02055.hp1 others(6): Show HG01243.hp2 HG01891.hp2 HG02055.hp1 HG02451.hp1 HG02809.hp2 HG02896.hp2 HG02897.hp2 HG03516.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 a0001c0001 a0001c0004 a0001c0006	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0018 a0001c0004t0001 a0001c0006t0029	a0001c0001t0001g0072 a0001c0001t0001g0078 a0001c0001t0001g0079 others(6): Show a0001c0001t0001g0072 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0005g0028 a0001c0001t0006g0007 a0001c0001t0007g0046 a0001c0001t0018g0067 a0001c0004t0001g0005 a0001c0006t0029g0108	9	110	0.0818	-15	c.788 others(34): Show c.788-25043_788-25029delAAAAAAAAAAAAAAA		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	6/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33676372	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02486.hp1 HG02615.hp1 others(7): Show HG01099.hp2 HG02486.hp1 HG02615.hp1 HG02818.hp1 HG02896.hp2 HG02897.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0025 a0001c0003t0032 a0001c0004t0004 a0001c0004t0005 a0001c0004t0013	a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0004g0010 others(7): Show a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0004g0010 a0001c0001t0005g0024 a0001c0001t0007g0048 a0001c0001t0025g0087 a0001c0003t0032g0107 a0001c0004t0004g0077 a0001c0004t0005g0026 a0001c0004t0013g0102	10	110	0.0909	-15	c.107 others(34): Show c.107-25719_107-25705delTTTTTTTTTTTTTTT		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33713967	ATAACGTA others(8): Show ATAACGTAACATAACG	A A	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0013 a0001c0004t0013	a0001c0004t0013g0102 a0001c0004t0013g0102	1	110	0.0091	-15	c.106 others(34): Show c.106+47389_106+47403delCGTTATGTTACGTTA		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33713972	GTAACATA others(8): Show GTAACATAACGTAACA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01071.hp1 HG02258.hp2 others(5): Show HG00280.hp2 HG01071.hp1 HG02258.hp2 HG02723.hp1 HG02970.hp1 HG02970.hp2 HG03139.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0001t0013 a0001c0001t0026 a0001c0002t0001 a0001c0002t0022	a0001c0001t0001g0044 a0001c0001t0006g0081 a0001c0001t0007g0066 others(5): Show a0001c0001t0001g0044 a0001c0001t0006g0081 a0001c0001t0007g0066 a0001c0001t0013g0095 a0001c0001t0026g0091 a0001c0002t0001g0058 a0001c0002t0001g0069 a0001c0002t0022g0103	8	110	0.0727	-15	c.106 others(34): Show c.106+47384_106+47398delTGTTACGTTATGTTA		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33722251	AGAGGGAG others(8): Show AGAGGGAGAGGGAGAG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp1 HG00621.hp2 others(34): Show HG00280.hp2 HG00621.hp1 HG00621.hp2 HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01346.hp1 HG01884.hp1 HG02055.hp2 HG02148.hp1 HG02258.hp2 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02559.hp2 HG02615.hp2 HG02647.hp1 HG02723.hp1 HG02818.hp2 HG02970.hp1 HG03139.hp1 HG03139.hp2 HG03453.hp1 HG03516.hp2 HG03540.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA19068.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0009 a0001c0019 a0002c0005 a0005c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0024 a0001c0001t0026 a0001c0002t0001 a0001c0002t0002 a0001c0002t0021 a0001c0002t0022 a0001c0002t0027 a0001c0003t0011 a0001c0004t0005 a0001c0006t0029 a0001c0009t0003 a0001c0019t0003 a0002c0005t0008 a0005c0011t0001	a0001c0001t0001g0012 a0001c0001t0001g0020 a0001c0001t0001g0031 others(34): Show a0001c0001t0001g0012 a0001c0001t0001g0020 a0001c0001t0001g0031 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0057 a0001c0001t0002g0085 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0003g0032 a0001c0001t0004g0010 a0001c0001t0004g0017 a0001c0001t0004g0030 a0001c0001t0005g0023 a0001c0001t0005g0028 a0001c0001t0006g0011 a0001c0001t0007g0048 a0001c0001t0007g0066 a0001c0001t0014g0075 a0001c0001t0015g0004 a0001c0001t0017g0074 a0001c0001t0024g0101 a0001c0001t0026g0091 a0001c0002t0001g0055 a0001c0002t0001g0058 a0001c0002t0001g0069 a0001c0002t0002g0097 a0001c0002t0021g0099 a0001c0002t0022g0103 a0001c0002t0027g0104 a0001c0003t0011g0018 a0001c0004t0005g0026 a0001c0006t0029g0108 a0001c0009t0003g0084 a0001c0019t0003g0025 a0002c0005t0008g0014 a0005c0011t0001g0082	37	110	0.3364	-15	c.106 others(34): Show c.106+39105_106+39119delCTCTCCCTCTCCCTC		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33763838	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03453.hp1 NA18522.hp1 HG02559.hp2 HG03453.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0019 a0001c0001 a0001c0009 a0001c0019	a0001c0001t0005 a0001c0009t0003 a0001c0019t0003 a0001c0001t0005 a0001c0009t0003 a0001c0019t0003	a0001c0001t0005g0028 a0001c0009t0003g0084 a0001c0019t0003g0025 a0001c0001t0005g0028 a0001c0009t0003g0084 a0001c0019t0003g0025	3	110	0.0273	-15	c.-82 others(32): Show c.-82-2295_-82-2281delAAAAAAAAAAAAAAA		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33777684	AAGGGGAA others(8): Show AAGGGGAAGGGAAGGC	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0075 a0001c0001t0014g0075	1	110	0.0091	-15	c.-82 others(34): Show c.-82-16141_-82-16127delGCCTTCCCTTCCCCT		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33842909	CAAACAAA others(8): Show CAAACAAAACAAAACA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02723.hp1 HG02970.hp1 others(2): Show HG01243.hp2 HG02723.hp1 HG02970.hp1 HG02970.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006	a0001c0001t0007 a0001c0001t0013 a0001c0002t0022 others(2): Show a0001c0001t0007 a0001c0001t0013 a0001c0002t0022 a0001c0003t0009 a0001c0006t0029	a0001c0001t0007g0066 a0001c0001t0013g0095 a0001c0002t0022g0103 others(2): Show a0001c0001t0007g0066 a0001c0001t0013g0095 a0001c0002t0022g0103 a0001c0003t0009g0016 a0001c0006t0029g0108	5	110	0.0455	-15	c.-83 others(34): Show c.-83+77071_-83+77085delTGTTTTGTTTTGTTT		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14						chr22	TogoVar
LARGE2_chr11_45917656_45934096	45923985	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00733.hp2 HG01243.hp2 others(48): Show HG00423.hp1 HG00733.hp2 HG01243.hp2 HG01261.hp1 HG01496.hp1 HG02074.hp1 HG02080.hp2 HG02258.hp1 HG02280.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp2 HG03491.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp2 HG03688.hp1 HG03704.hp2 HG03831.hp1 HG04115.hp2 HG04204.hp2 NA18906.hp2 NA18941.hp2 NA18967.hp2 NA18973.hp2 NA19010.hp2 NA19054.hp1 NA19054.hp2 NA19058.hp2 NA19068.hp1 NA20300.hp2	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0002c0007 a0007c0018	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0006t0001 a0002c0007t0001 a0007c0018t0004	a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0022 others(12): Show a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0002t0001g0018 a0001c0002t0001g0022 a0001c0002t0001g0029 a0001c0002t0001g0036 a0001c0002t0001g0051 a0001c0004t0001g0022 a0001c0004t0001g0023 a0001c0006t0001g0018 a0002c0007t0001g0005 a0007c0018t0004g0055	51	418	0.1220	-15	c.369 others(30): Show c.369-145_369-131delAAAAAAAAAAAAAAA		LARGE2	ENSG00000165905.18	transcript	ENST00000401752.6	protein_coding	3/13					INFO_REALIGN_3_PRIME	chr11	TogoVar
LARP1B_chr4_128056312_128216988	128065336	CTTTCTTT others(8): Show CTTTCTTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG03516.hp2 HG01168.hp1 HG03516.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0099 a0005c0006t0001g0100 a0005c0006t0001g0099 a0005c0006t0001g0100	2	336	0.0060	-15	c.-78 others(32): Show c.-78+3968_-78+3982delTCTTTTCTTTTCTTT		LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	1/19					INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128073572	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0059 a0002c0002t0005g0059	1	336	0.0030	-15	c.-77 others(30): Show c.-77-865_-77-851delTTTTTTTTTTTTTTT		LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	1/19					INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128194682	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0105 a0002c0003t0001g0105	1	336	0.0030	-15	c.200 others(34): Show c.2004-4742_2004-4728delAAAAAAAAAAAAAAA		LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	15/19					INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1_chr5_154750377_154822605	154757849	CCCCCCTG others(8): Show CCCCCCTGCTCCCCTT	C C	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03471.hp2 HG03139.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0024 a0001c0001t0008g0023 a0001c0001t0002g0024 a0001c0001t0008g0023	2	304	0.0066	-15	c.436 others(32): Show c.436+1662_436+1676delTGCTCCCCTTCCCCC		LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding	1/18					INFO_REALIGN_3_PRIME	chr5	TogoVar
LARP1_chr5_154750377_154822605	154795998	ATATATAT others(8): Show ATATATATTATATATT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0023 a0005c0009t0023	a0005c0009t0023g0130 a0005c0009t0023g0130	1	304	0.0033	-15	c.137 others(32): Show c.1377+694_1377+708delTTATATATTATATAT		LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding	8/18					INFO_REALIGN_3_PRIME	chr5	TogoVar
LARP1_chr5_154750377_154822605	154797221	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0105 a0001c0001t0002g0105	1	304	0.0033	-15	c.137 others(34): Show c.1377+1917_1377+1931delTTTTTTTTTTTTTTT		LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding	8/18					INFO_REALIGN_3_PRIME	chr5	TogoVar
LARP4B_chr10_804497_936705	833249	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	1	288	0.0035	-15	c.751 others(32): Show c.751-2287_751-2273delTTTTTTTTTTTTTTT		LARP4B	ENSG00000107929.16	transcript	ENST00000316157.8	protein_coding	8/17						chr10	TogoVar
LARP4B_chr10_804497_936705	869904	AAATAATA others(8): Show AAATAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01168.hp1 HG01169.hp1 others(9): Show HG01074.hp2 HG01168.hp1 HG01169.hp1 HG01358.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01943.hp1 HG01975.hp2 HG02004.hp1 HG03704.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0023 others(3): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0023 a0001c0001t0026 a0001c0001t0037 a0001c0001t0038	a0001c0001t0002g0175 a0001c0001t0007g0241 a0001c0001t0007g0242 others(8): Show a0001c0001t0002g0175 a0001c0001t0007g0241 a0001c0001t0007g0242 a0001c0001t0007g0244 a0001c0001t0007g0245 a0001c0001t0007g0246 a0001c0001t0007g0247 a0001c0001t0023g0002 a0001c0001t0026g0240 a0001c0001t0037g0243 a0001c0001t0038g0239	12	288	0.0417	-15	c.142 others(32): Show c.142-5649_142-5635delATTATTATTATTATT		LARP4B	ENSG00000107929.16	transcript	ENST00000316157.8	protein_coding	3/17						chr10	TogoVar
LARP4_chr12_50395885_50485004	50436108	GTGTGTGT others(8): Show GTGTGTGTGTGTGATA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 NA21309.hp2 HG01109.hp1 NA21309.hp2	a0001 a0001	a0001c0006 a0001c0010 a0001c0006 a0001c0010	a0001c0006t0007 a0001c0010t0007 a0001c0006t0007 a0001c0010t0007	a0001c0006t0007g0110 a0001c0010t0007g0111 a0001c0006t0007g0110 a0001c0010t0007g0111	2	318	0.0063	-15	c.535 others(30): Show c.535+497_535+511delATATGTGTGTGTGTG		LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	5/15					INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50459822	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00544.hp1 others(23): Show HG00099.hp2 HG00140.hp1 HG00544.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01517.hp2 HG01891.hp2 HG01934.hp2 HG02280.hp2 HG02523.hp2 HG02602.hp2 HG02683.hp1 HG03688.hp1 NA18954.hp1 NA18959.hp2 NA18964.hp1 NA18980.hp1 NA18991.hp2 NA18992.hp1 NA19000.hp2 NA19007.hp2 NA19010.hp1 NA19057.hp2 NA19066.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0009 a0001c0001t0002 a0001c0001t0009	a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 others(23): Show a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0002g0051 a0001c0001t0002g0055 a0001c0001t0002g0068 a0001c0001t0002g0070 a0001c0001t0002g0072 a0001c0001t0002g0074 a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0080 a0001c0001t0002g0087 a0001c0001t0002g0099 a0001c0001t0002g0106 a0001c0001t0002g0115 a0001c0001t0002g0122 a0001c0001t0002g0137 a0001c0001t0002g0151 a0001c0001t0002g0302 a0001c0001t0002g0308 a0001c0001t0009g0059	26	318	0.0818	-15	c.112 others(34): Show c.1122-1303_1122-1289delAAAAAAAAAAAAAAA		LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	10/15					INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP7_chr4_112632143_112662586	112650175	ATTTACTG others(8): Show ATTTACTGTTCCTTTG	A A	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	420	0.0024	-15	c.129 others(32): Show c.1295-283_1295-269delTACTGTTCCTTTGTT		LARP7	ENSG00000174720.18	transcript	ENST00000344442.10	protein_coding	9/12					INFO_REALIGN_3_PRIME	chr4	TogoVar
LARS1_chr5_146108034_146187650	146128484	ACAGCAGC others(8): Show ACAGCAGCTTTTCCCT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00438.hp2 others(76): Show HG00140.hp2 HG00323.hp1 HG00438.hp2 HG00639.hp2 HG00642.hp2 HG00735.hp2 HG00741.hp1 HG01070.hp1 HG01192.hp1 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01361.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG02027.hp2 HG02040.hp2 HG02074.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp1 HG02300.hp2 HG02683.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp2 HG04204.hp2 NA18747.hp2 NA18944.hp1 NA18946.hp1 NA18948.hp2 NA18949.hp2 NA18951.hp1 NA18952.hp1 NA18954.hp1 NA18960.hp2 NA18965.hp2 NA18967.hp1 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18975.hp2 NA18978.hp2 NA18979.hp1 NA18980.hp1 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA19007.hp1 NA19056.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19068.hp1 NA19077.hp2 NA19079.hp2 NA19081.hp2 NA19085.hp1 NA19090.hp1 NA19091.hp2 NA20752.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0011 a0004c0012 a0002c0002 a0003c0011 a0004c0012	a0002c0002t0002 a0003c0011t0002 a0004c0012t0002 a0002c0002t0002 a0003c0011t0002 a0004c0012t0002	a0002c0002t0002g0201 a0002c0002t0002g0202 a0002c0002t0002g0203 others(76): Show a0002c0002t0002g0201 a0002c0002t0002g0202 a0002c0002t0002g0203 a0002c0002t0002g0204 a0002c0002t0002g0206 a0002c0002t0002g0207 a0002c0002t0002g0208 a0002c0002t0002g0209 a0002c0002t0002g0210 a0002c0002t0002g0211 a0002c0002t0002g0212 a0002c0002t0002g0213 a0002c0002t0002g0214 a0002c0002t0002g0215 a0002c0002t0002g0216 a0002c0002t0002g0217 a0002c0002t0002g0218 a0002c0002t0002g0219 a0002c0002t0002g0220 a0002c0002t0002g0221 a0002c0002t0002g0222 a0002c0002t0002g0223 a0002c0002t0002g0224 a0002c0002t0002g0225 a0002c0002t0002g0226 a0002c0002t0002g0227 a0002c0002t0002g0228 a0002c0002t0002g0229 a0002c0002t0002g0230 a0002c0002t0002g0231 a0002c0002t0002g0232 a0002c0002t0002g0233 a0002c0002t0002g0234 a0002c0002t0002g0235 a0002c0002t0002g0236 a0002c0002t0002g0237 a0002c0002t0002g0239 a0002c0002t0002g0240 a0002c0002t0002g0241 a0002c0002t0002g0242 a0002c0002t0002g0243 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0246 a0002c0002t0002g0247 a0002c0002t0002g0248 a0002c0002t0002g0249 a0002c0002t0002g0250 a0002c0002t0002g0251 a0002c0002t0002g0252 a0002c0002t0002g0253 a0002c0002t0002g0254 a0002c0002t0002g0255 a0002c0002t0002g0256 a0002c0002t0002g0257 a0002c0002t0002g0258 a0002c0002t0002g0259 a0002c0002t0002g0260 a0002c0002t0002g0261 a0002c0002t0002g0262 a0002c0002t0002g0263 a0002c0002t0002g0264 a0002c0002t0002g0265 a0002c0002t0002g0266 a0002c0002t0002g0267 a0002c0002t0002g0268 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0002g0271 a0002c0002t0002g0272 a0002c0002t0002g0273 a0002c0002t0002g0274 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0002g0277 a0002c0002t0002g0278 a0002c0002t0002g0279 a0003c0011t0002g0238 a0004c0012t0002g0205	79	284	0.2782	-15	c.288 others(32): Show c.2880+173_2880+187delAGGGAAAAGCTGCTG		LARS1	ENSG00000133706.20	transcript	ENST00000394434.7	protein_coding	27/31						chr5	TogoVar
LARS1_chr5_146108034_146187650	146181848	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	284	0.0035	-15	c.6+6 others(26): Show c.6+625_6+639delAAAAAAAAAAAAAAA		LARS1	ENSG00000133706.20	transcript	ENST00000394434.7	protein_coding	1/31						chr5	TogoVar
LARS2_chr3_45383576_45554407	45439210	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0155 a0001c0001t0003g0155	1	242	0.0041	-15	c.517 others(32): Show c.517-7666_517-7652delTTTTTTTTTTTTTTT		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	6/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45485272	GCTCAGTC others(8): Show GCTCAGTCATTTTCTA	G G	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0218 a0001c0002t0001g0218	1	242	0.0041	-15	c.101 others(32): Show c.1019-416_1019-402delAGTCATTTTCTACTC		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LAS1L_chrX_65507582_65539787	65527210	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01255.hp1 HG02257.hp2 others(18): Show HG01243.hp1 HG01255.hp1 HG02257.hp2 HG02622.hp1 HG02717.hp1 HG02809.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp2 HG03540.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0018 others(12): Show a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143	21	203	0.1035	-15	c.956 others(32): Show c.956+1035_956+1049delTTTTTTTTTTTTTTT		LAS1L	ENSG00000001497.18	transcript	ENST00000374811.8	protein_coding	7/13						chrX	TogoVar
LAS1L_chrX_65507582_65539787	65538512	ATATATAT others(8): Show ATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0016	1	203	0.0049	-15	c.-38 others(26): Show c.-3812_-3798delATATATATATATATA		LAS1L	ENSG00000001497.18	transcript	ENST00000374811.8	protein_coding					3726		chrX	TogoVar
LAT2_chr7_74205006_74234834	74219009	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01109.hp2 HG02258.hp1 others(1): Show HG00639.hp1 HG01109.hp2 HG02258.hp1 HG03579.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0001 a0004c0007t0001 a0001c0001t0001 a0004c0007t0001	a0001c0001t0001g0092 a0001c0001t0001g0161 a0001c0001t0001g0214 others(1): Show a0001c0001t0001g0092 a0001c0001t0001g0161 a0001c0001t0001g0214 a0004c0007t0001g0223	4	344	0.0116	-15	c.135 others(30): Show c.135-711_135-697delTTTTTTTTTTTTTTT		LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	4/13					INFO_REALIGN_3_PRIME	chr7	TogoVar
LATS1_chr6_149653153_149723101	149678162	TCCAAAAA others(8): Show TCCAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18984.hp2 NA19003.hp2 others(3): Show NA18955.hp2 NA18984.hp2 NA19003.hp2 NA19010.hp2 NA19088.hp1 NA19091.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0031 a0001c0002t0002g0050 a0001c0002t0002g0068 others(3): Show a0001c0002t0002g0031 a0001c0002t0002g0050 a0001c0002t0002g0068 a0001c0002t0002g0075 a0001c0002t0002g0110 a0001c0002t0002g0113	6	272	0.0221	-15	c.259 others(34): Show c.2594-1440_2594-1426delTTTTTTTTTTTTTGG		LATS1	ENSG00000131023.13	transcript	ENST00000543571.6	protein_coding	5/7						chr6	TogoVar
LATS2_chr13_20968036_21066586	20969709	TATATATA others(8): Show TATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0003 a0003	a0003c0036 a0003c0036	a0003c0036t0009 a0003c0036t0009	a0003c0036t0009g0310 a0003c0036t0009g0310	1	316	0.0032	-15	c.51 others(26): Show c.5146_*5160delTATATATATATATAT		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding					3326		chr13	TogoVar
LATS2_chr13_20968036_21066586	20969898	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0275 a0001c0001t0001g0275	1	316	0.0032	-15	c.49 others(26): Show c.4957_*4971delTTTTTTTTTTTTTTT		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding					3137		chr13	TogoVar
LATS2_chr13_20968036_21066586	21019298	GTTATTAT others(8): Show GTTATTATTATTATTA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp2 HG02258.hp1 others(9): Show HG01884.hp1 HG02055.hp2 HG02258.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02723.hp2 HG02897.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 NA19070.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0003c0005 others(3): Show a0001c0001 a0003c0003 a0003c0005 a0003c0008 a0003c0009 a0003c0036	a0001c0001t0001 a0003c0003t0004 a0003c0003t0025 others(9): Show a0001c0001t0001 a0003c0003t0004 a0003c0003t0025 a0003c0005t0001 a0003c0008t0046 a0003c0009t0008 a0003c0009t0009 a0003c0009t0016 a0003c0009t0026 a0003c0009t0031 a0003c0009t0032 a0003c0036t0009	a0001c0001t0001g0214 a0003c0003t0004g0259 a0003c0003t0025g0287 others(9): Show a0001c0001t0001g0214 a0003c0003t0004g0259 a0003c0003t0025g0287 a0003c0005t0001g0084 a0003c0008t0046g0288 a0003c0009t0008g0309 a0003c0009t0009g0308 a0003c0009t0016g0307 a0003c0009t0026g0029 a0003c0009t0031g0031 a0003c0009t0032g0289 a0003c0036t0009g0310	12	316	0.0380	-15	c.342 others(34): Show c.342+26372_342+26386delTAATAATAATAATAA		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7						chr13	TogoVar
LATS2_chr13_20968036_21066586	21037803	GCCAGGGT others(8): Show GCCAGGGTGGTCAGGA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02258.hp1 others(4): Show HG01243.hp2 HG01884.hp1 HG02258.hp1 HG02622.hp1 HG03225.hp1 HG03453.hp2 HG03486.hp1	a0003 a0008 a0003 a0008	a0003c0008 a0003c0009 a0003c0036 others(1): Show a0003c0008 a0003c0009 a0003c0036 a0008c0033	a0003c0008t0009 a0003c0009t0008 a0003c0009t0009 others(4): Show a0003c0008t0009 a0003c0009t0008 a0003c0009t0009 a0003c0009t0016 a0003c0009t0032 a0003c0036t0009 a0008c0033t0001	a0003c0008t0009g0088 a0003c0009t0008g0309 a0003c0009t0009g0308 others(4): Show a0003c0008t0009g0088 a0003c0009t0008g0309 a0003c0009t0009g0308 a0003c0009t0016g0307 a0003c0009t0032g0289 a0003c0036t0009g0310 a0008c0033t0001g0304	7	316	0.0222	-15	c.342 others(32): Show c.342+7867_342+7881delTCCTGACCACCCTGG		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7						chr13	TogoVar
LBP_chr20_38341482_38382013	38348777	AGTTTAGT others(8): Show AGTTTAGTTTAGTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02622.hp2 HG02886.hp2 others(1): Show HG01884.hp2 HG02622.hp2 HG02886.hp2 NA18906.hp2	a0007 a0007	a0007c0011 a0007c0011	a0007c0011t0002 a0007c0011t0002	a0007c0011t0002g0010 a0007c0011t0002g0333 a0007c0011t0002g0010 a0007c0011t0002g0333	4	394	0.0102	-15	c.125 others(30): Show c.125-766_125-752delAGTTTAGTTTTGTTT		LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding	1/14					INFO_REALIGN_3_PRIME	chr20	TogoVar
LBP_chr20_38341482_38382013	38374598	AAAAAAAA others(8): Show AAAAAAAAAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00621.hp2 NA18990.hp1 HG00621.hp2 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0263 a0001c0003t0001g0086 a0001c0001t0001g0263 a0001c0003t0001g0086	2	394	0.0051	-15	c.140 others(32): Show c.1401+605_1401+619delAAAAAAGAAAGAAAA		LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding	14/14					INFO_REALIGN_3_PRIME	chr20	TogoVar
LCA5L_chr21_39400728_39450778	39446274	CTAGATGA others(8): Show CTAGATGATGGAGTTA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0259 a0002c0002t0002g0259	1	340	0.0029	-15	c.-87 others(24): Show c.-877_-863delTAACTCCATCATCTA		LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding					497		chr21	TogoVar
LCA5_chr6_79479991_79542430	79538018	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0010	1	400	0.0025	-15	c.-10 others(26): Show c.-1060_-1046delAAAAAAAAAAAAAAA		LCA5	ENSG00000135338.14	transcript	ENST00000369846.9	protein_coding					589		chr6	TogoVar
LCE1C_chr1_152799832_152811651	152799890	AGTAGAAA others(8): Show AGTAGAAAGCCTCTCC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	422	0.0024	-15	c.52 others(26): Show c.5217_*5231delGGAGAGGCTTTCTAC		LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding					4941		chr1	TogoVar
LCE1F_chr1_152770140_152782024	152776437	CAAGTGCC others(8): Show CAAGTGCCCCACACCG	C C	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG02572.hp1 HG03041.hp1 HG03579.hp2 others(1): Show HG02572.hp1 HG03041.hp1 HG03579.hp2 NA18906.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0007 a0005c0005t0001g0007	4	438	0.0091	-15	c.76_ others(20): Show c.76_90delACACCGAAGTGCCCC	p.Thr others(11): Show p.Thr26_Pro30del	LCE1F	ENSG00000240386.4	transcript	ENST00000334371.4	protein_coding	2/2	149/726	76/357	26/118		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCK_chr1_32246265_32291165	32263427	AAATAAAT others(8): Show AAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02630.hp1 HG03209.hp1 others(2): Show HG02257.hp1 HG02630.hp1 HG03209.hp1 HG03453.hp1 HG03516.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0029 others(2): Show a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0029 a0001c0003t0002g0030 a0001c0003t0002g0031	5	274	0.0183	-15	c.-5- others(32): Show c.-5-10895_-5-10881delTAAATAAATAAATAA		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCK_chr1_32246265_32291165	32266718	CCCTCCCC others(8): Show CCCTCCCCTTCCCCCT	C C	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0187 a0001c0001t0001g0187	1	274	0.0037	-15	c.-5- others(30): Show c.-5-7599_-5-7585delTTCCCCCTCCTCCCC		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCLAT1_chr2_30442246_30649225	30484776	AAAGTGAT others(8): Show AAAGTGATTTCATTTT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00558.hp1 HG00558.hp2 others(66): Show HG00280.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp2 HG01069.hp2 HG01071.hp2 HG01099.hp1 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG02004.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02132.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02809.hp1 HG03017.hp1 HG03130.hp1 HG03239.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03688.hp2 HG03710.hp2 HG03834.hp1 HG04228.hp2 NA18612.hp1 NA18950.hp1 NA18952.hp1 NA18955.hp1 NA18963.hp2 NA18968.hp2 NA18971.hp1 NA18983.hp1 NA18984.hp2 NA18991.hp1 NA18994.hp1 NA18999.hp1 NA19002.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp2 NA19043.hp2 NA19056.hp2 NA19060.hp1 NA19062.hp2 NA19074.hp2 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19084.hp2 NA19088.hp2 NA20905.hp1	a0002 a0005 a0006 a0002 a0005 a0006	a0002c0002 a0005c0006 a0006c0007 a0002c0002 a0005c0006 a0006c0007	a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 others(18): Show a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 a0002c0002t0015 a0002c0002t0022 a0002c0002t0023 a0002c0002t0024 a0002c0002t0025 a0002c0002t0032 a0002c0002t0033 a0002c0002t0034 a0002c0002t0035 a0002c0002t0036 a0002c0002t0037 a0002c0002t0038 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041 a0002c0002t0043 a0005c0006t0042 a0006c0007t0009	a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0031 others(65): Show a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0002g0032 a0002c0002t0002g0033 a0002c0002t0002g0035 a0002c0002t0002g0039 a0002c0002t0002g0040 a0002c0002t0002g0042 a0002c0002t0002g0045 a0002c0002t0002g0046 a0002c0002t0002g0047 a0002c0002t0002g0049 a0002c0002t0002g0050 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0056 a0002c0002t0002g0058 a0002c0002t0002g0059 a0002c0002t0002g0064 a0002c0002t0002g0070 a0002c0002t0002g0071 a0002c0002t0002g0076 a0002c0002t0002g0077 a0002c0002t0002g0078 a0002c0002t0002g0085 a0002c0002t0002g0086 a0002c0002t0002g0087 a0002c0002t0002g0121 a0002c0002t0002g0122 a0002c0002t0002g0123 a0002c0002t0002g0124 a0002c0002t0009g0041 a0002c0002t0009g0044 a0002c0002t0009g0055 a0002c0002t0009g0060 a0002c0002t0009g0066 a0002c0002t0009g0083 a0002c0002t0010g0001 a0002c0002t0010g0068 a0002c0002t0010g0126 a0002c0002t0010g0127 a0002c0002t0010g0128 a0002c0002t0015g0063 a0002c0002t0015g0065 a0002c0002t0015g0082 a0002c0002t0022g0034 a0002c0002t0022g0061 a0002c0002t0023g0043 a0002c0002t0023g0084 a0002c0002t0024g0074 a0002c0002t0024g0081 a0002c0002t0025g0038 a0002c0002t0025g0057 a0002c0002t0032g0028 a0002c0002t0033g0080 a0002c0002t0034g0062 a0002c0002t0035g0048 a0002c0002t0036g0037 a0002c0002t0037g0067 a0002c0002t0038g0036 a0002c0002t0039g0079 a0002c0002t0040g0072 a0002c0002t0041g0073 a0002c0002t0043g0051 a0005c0006t0042g0069 a0006c0007t0009g0075	69	366	0.1885	-15	c.-5+ others(32): Show c.-5+37396_-5+37410delGTGATTTCATTTTAA		LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30521489	CTTCTTTT others(8): Show CTTCTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp2 NA20300.hp1 HG02818.hp2 NA20300.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0045 a0004c0005t0070 a0001c0001t0045 a0004c0005t0070	a0001c0001t0045g0348 a0004c0005t0070g0341 a0001c0001t0045g0348 a0004c0005t0070g0341	2	366	0.0055	-15	c.-4- others(30): Show c.-4-4095_-4-4081delCTTTTTTTTTTTTTT		LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr2	TogoVar
LCMT1_chr16_25106742_25183228	25150333	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02630.hp1 HG02717.hp2 others(1): Show HG02280.hp1 HG02630.hp1 HG02717.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 others(1): Show a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023	4	348	0.0115	-15	c.405 others(32): Show c.405-1207_405-1193delTTTTTTTTTTTTTTT		LCMT1	ENSG00000205629.12	transcript	ENST00000399069.8	protein_coding	4/10					INFO_REALIGN_3_PRIME	chr16	TogoVar
LCN1_chr9_135516440_135531540	135526301	ACCCTTGC others(8): Show ACCCTTGCTGTCCTGG	A A	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	436	0.0023	-15	c.2- others(26): Show c.2-40_*2-26delCTTGCTGTCCTGGCC		LCN1	ENSG00000160349.10	transcript	ENST00000371781.4	protein_coding	6/6					INFO_REALIGN_3_PRIME	chr9	TogoVar
LCN1_chr9_135516440_135531540	135529097	AAAAATAA others(8): Show AAAAATAAAATAAAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG00642.hp2 HG01109.hp2 others(68): Show HG00609.hp1 HG00642.hp2 HG01109.hp2 HG01255.hp2 HG01496.hp1 HG01884.hp1 HG01978.hp1 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp2 HG02257.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03239.hp2 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp2 HG03704.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18975.hp2 NA18984.hp2 NA18992.hp2 NA18995.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19004.hp1 NA19030.hp2 NA19043.hp2 NA19058.hp2 NA19072.hp1 NA19081.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19240.hp2	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0003c0003 a0007c0005 a0001c0001 a0003c0003 a0007c0005	a0001c0001t0001 a0003c0003t0001 a0007c0005t0001 a0001c0001t0001 a0003c0003t0001 a0007c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(21): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0031 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0001g0077 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0091 a0003c0003t0001g0074 a0007c0005t0001g0003	71	436	0.1628	-15	c.27 others(26): Show c.2756_*2770delAAAATAAAATAAAAT		LCN1	ENSG00000160349.10	transcript	ENST00000371781.4	protein_coding					2558		chr9	TogoVar
LCN6_chr9_136739017_136753525	136748017	GCAGCCCT others(8): Show GCAGCCCTCCAGCCTC	G G	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0053 a0005c0006t0002g0053	1	396	0.0025	-15	c.90+ others(28): Show c.90+362_90+376delGAGGCTGGAGGGCTG		LCN6	ENSG00000267206.6	transcript	ENST00000341206.9	protein_coding	1/6						chr9	TogoVar
LCN8_chr9_136749386_136763243	136762358	ACTCCACC others(8): Show ACTCCACCAGCCTGAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	368	0.0027	-15	c.-44 others(26): Show c.-4443_-4429delCTCAGGCTGGTGGAG		LCN8	ENSG00000204001.10	transcript	ENST00000371688.8	protein_coding					4116		chr9	TogoVar
LCORL_chr4_17836187_18026755	17911278	CAAATGGC others(8): Show CAAATGGCAAATAAGT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02145.hp1 HG02615.hp1 others(9): Show HG02055.hp2 HG02145.hp1 HG02615.hp1 HG02809.hp1 HG02922.hp1 HG02965.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp2 NA19043.hp1 NA20129.hp1 NA20300.hp2	a0004 a0016 a0004 a0016	a0004c0005 a0004c0020 a0016c0029 a0004c0005 a0004c0020 a0016c0029	a0004c0005t0008 a0004c0005t0030 a0004c0005t0031 others(2): Show a0004c0005t0008 a0004c0005t0030 a0004c0005t0031 a0004c0020t0032 a0016c0029t0006	a0004c0005t0008g0280 a0004c0005t0008g0281 a0004c0005t0008g0282 others(9): Show a0004c0005t0008g0280 a0004c0005t0008g0281 a0004c0005t0008g0282 a0004c0005t0008g0283 a0004c0005t0008g0286 a0004c0005t0008g0287 a0004c0005t0008g0288 a0004c0005t0008g0289 a0004c0005t0030g0290 a0004c0005t0031g0284 a0004c0020t0032g0279 a0016c0029t0006g0285	12	292	0.0411	-15	c.431 others(32): Show c.431-1948_431-1934delACTTATTTGCCATTT		LCORL	ENSG00000178177.17	transcript	ENST00000635767.2	protein_coding	4/7						chr4	TogoVar
LCOR_chr10_96827298_97000956	96845449	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00733.hp1 HG01070.hp2 others(35): Show HG00639.hp1 HG00733.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01167.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01515.hp2 HG02055.hp1 HG02109.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02818.hp2 HG02895.hp1 HG03195.hp1 HG03471.hp1 HG03516.hp2 HG03540.hp2 HG03688.hp2 HG04115.hp2 HG04228.hp2 NA18943.hp2 NA18960.hp1 NA18966.hp1 NA18993.hp1 NA19007.hp1 NA19012.hp2 NA19030.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0015	a0001c0001 a0001c0004 a0002c0002 others(2): Show a0001c0001 a0001c0004 a0002c0002 a0003c0003 a0015c0021	a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 others(26): Show a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0022 a0001c0001t0023 a0001c0001t0051 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0068 a0001c0001t0069 a0001c0001t0070 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0075 a0001c0001t0076 a0001c0001t0079 a0001c0004t0002 a0001c0004t0010 a0001c0004t0011 a0002c0002t0015 a0002c0002t0034 a0002c0002t0036 a0002c0002t0131 a0002c0002t0136 a0003c0003t0004 a0015c0021t0017	a0001c0001t0016g0004 a0001c0001t0016g0136 a0001c0001t0016g0176 others(35): Show a0001c0001t0016g0004 a0001c0001t0016g0136 a0001c0001t0016g0176 a0001c0001t0017g0145 a0001c0001t0017g0146 a0001c0001t0018g0150 a0001c0001t0018g0151 a0001c0001t0018g0152 a0001c0001t0022g0143 a0001c0001t0022g0144 a0001c0001t0023g0130 a0001c0001t0023g0159 a0001c0001t0051g0133 a0001c0001t0065g0148 a0001c0001t0066g0137 a0001c0001t0067g0138 a0001c0001t0068g0134 a0001c0001t0069g0129 a0001c0001t0070g0139 a0001c0001t0071g0132 a0001c0001t0072g0135 a0001c0001t0073g0141 a0001c0001t0074g0131 a0001c0001t0075g0140 a0001c0001t0076g0149 a0001c0001t0079g0142 a0001c0004t0002g0154 a0001c0004t0002g0157 a0001c0004t0010g0153 a0001c0004t0011g0155 a0002c0002t0015g0123 a0002c0002t0034g0104 a0002c0002t0036g0072 a0002c0002t0131g0103 a0002c0002t0136g0105 a0003c0003t0004g0023 a0003c0003t0004g0156 a0015c0021t0017g0147	38	288	0.1319	-15	c.-33 others(36): Show c.-330+11993_-330+12007delTTTTTTTTTTTTTTT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96849061	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	288	0.0035	-15	c.-33 others(36): Show c.-330+15598_-330+15612delTTTTTTTTTTTTTTT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr10	TogoVar

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