Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LGR6_chr1_202188799_202324761	202204909	CACACACA others(8): Show CACACACACACACCTA	C C	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0091 a0002c0002t0003g0091	1	262	0.0038	-15	c.212 others(34): Show c.212+10717_212+10731delACACCTAACACACAC	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
LGR6_chr1_202188799_202324761	202243942	TTTGTTGT others(8): Show TTTGTTGTTGTTGTTG	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02896.hp2 HG03209.hp1 others(1): Show HG01891.hp2 HG02896.hp2 HG03209.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0006 a0001c0001 a0002c0006	a0001c0001t0001 a0001c0001t0004 a0002c0006t0003 a0001c0001t0001 a0001c0001t0004 a0002c0006t0003	a0001c0001t0001g0132 a0001c0001t0004g0054 a0001c0001t0004g0056 others(1): Show a0001c0001t0001g0132 a0001c0001t0004g0054 a0001c0001t0004g0056 a0002c0006t0003g0090	4	262	0.0153	-15	c.428 others(32): Show c.428+7964_428+7978delGTTGTTGTTGTTGTT	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	4/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
LGR6_chr1_202188799_202324761	202262935	CTTTTATT others(8): Show CTTTTATTTTATTTTA	C C	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01981.hp2 HG02738.hp2 HG01261.hp2 HG01981.hp2 HG02738.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0177 a0002c0002t0002g0189 a0002c0002t0002g0243 a0002c0002t0002g0177 a0002c0002t0002g0189 a0002c0002t0002g0243	3	262	0.0115	-15	c.429 others(34): Show c.429-13339_429-13325delTTTATTTTATTTTAT	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	4/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
LHFPL3_chr7_104323603_104913561	104343512	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02056.hp1 HG03239.hp2 others(3): Show HG00558.hp1 HG02056.hp1 HG03239.hp2 NA18947.hp1 NA19063.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0002g0026 a0001c0001t0003g0025 a0001c0001t0003g0029 others(3): Show a0001c0001t0002g0026 a0001c0001t0003g0025 a0001c0001t0003g0029 a0001c0001t0004g0027 a0001c0001t0004g0028 a0001c0001t0004g0030	6	86	0.0698	-15	c.445 others(34): Show c.445+14313_445+14327delAAAAAAAAAAAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL4_chr3_9493361_9558822	9493938	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0007 a0001c0001t0003g0007	1	360	0.0028	-15	c.82 others(26): Show c.8258_*8272delAAAAAAAAAAAAAAA	LHFPL4	ENSG00000156959.9	transcript	ENST00000287585.8	protein_coding		4422		chr3	TogoVar
LHFPL5_chr6_35800352_35829070	35821857	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG02055.hp1 HG02486.hp2 others(2): Show HG01361.hp1 HG02055.hp1 HG02486.hp2 HG03209.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0089 a0001c0001t0090 a0001c0001t0021 a0001c0001t0089 a0001c0001t0090	a0001c0001t0021g0042 a0001c0001t0021g0043 a0001c0001t0021g0048 others(2): Show a0001c0001t0021g0042 a0001c0001t0021g0043 a0001c0001t0021g0048 a0001c0001t0089g0047 a0001c0001t0090g0049	5	386	0.0130	-15	c.17 others(32): Show c.17-1105_*17-1091delTTTTTTTTTTTTTTT	LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr6	TogoVar
LHPP_chr10_124456823_124619141	124460528	TTCTCGTG others(8): Show TTCTCGTGGCTGCATG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(176): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00642.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02280.hp2 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02683.hp2 HG02698.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp2 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18995.hp1 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp2 NA19057.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19077.hp1 NA19081.hp1 NA19081.hp2 NA19085.hp1 NA19085.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0006	a0001c0001 a0002c0002 a0004c0006 others(2): Show a0001c0001 a0002c0002 a0004c0006 a0005c0005 a0006c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0016 a0004c0006t0001 a0005c0005t0001 a0006c0007t0003	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(176): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0095 a0001c0001t0001g0103 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0003g0035 a0001c0001t0003g0064 a0001c0001t0003g0076 a0001c0001t0003g0171 a0001c0001t0003g0177 a0001c0001t0003g0182 a0001c0001t0003g0202 a0001c0001t0003g0205 a0001c0001t0003g0207 a0001c0001t0004g0020 a0001c0001t0004g0029 a0001c0001t0004g0059 a0001c0001t0004g0060 a0001c0001t0004g0173 a0001c0001t0010g0042 a0001c0001t0012g0027 a0001c0001t0013g0235 a0001c0001t0015g0195 a0001c0001t0017g0025 a0001c0001t0018g0037 a0002c0002t0001g0021 a0002c0002t0001g0023 a0002c0002t0001g0031 a0002c0002t0001g0039 a0002c0002t0001g0056 a0002c0002t0001g0058 a0002c0002t0001g0078 a0002c0002t0001g0079 a0002c0002t0001g0176 a0002c0002t0001g0198 a0002c0002t0001g0208 a0002c0002t0001g0209 a0002c0002t0001g0251 a0002c0002t0002g0168 a0002c0002t0003g0030 a0002c0002t0016g0052 a0004c0006t0001g0245 a0005c0005t0001g0162 a0006c0007t0003g0215	179	260	0.6885	-15	c.-13 others(26): Show c.-1334_-1320delTCTCGTGGCTGCATG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding		1294		chr10	TogoVar
LHPP_chr10_124456823_124619141	124462051	CCGGCAGG others(8): Show CCGGCAGGGGGCGGGG	C C	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA19000.hp2 NA19068.hp1 NA18961.hp1 NA19000.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003	3	260	0.0115	-15	c.125 others(28): Show c.125+81_125+95delGGCAGGGGGCGGGGC	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124610995	AGGGTGTT others(8): Show AGGGTGTTAATGAAGC	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02257.hp2 HG02258.hp1 others(8): Show HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02922.hp2 HG02970.hp2 HG03139.hp1 HG03139.hp2 NA18522.hp1 NA18522.hp2 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0015 a0003c0003t0002 a0001c0001t0001 a0001c0001t0015 a0003c0003t0002	a0001c0001t0001g0131 a0001c0001t0001g0136 a0001c0001t0001g0137 others(8): Show a0001c0001t0001g0131 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0150 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0015g0195 a0003c0003t0002g0004	11	260	0.0423	-15	c.717 others(32): Show c.717-2263_717-2249delTTAATGAAGCGGGTG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHX2_chr9_124006768_124038301	124016020	AGGCTTGG others(8): Show AGGCTTGGGGAACTCG	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0178 a0001c0001t0016g0178	1	402	0.0025	-15	c.727 others(30): Show c.727+510_727+524delGGGCTTGGGGAACTC	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr9	TogoVar
LHX3_chr9_136191250_136210128	136208481	GCAAAAGG others(8): Show GCAAAAGGAGCATGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0015 a0001c0001t0004g0015	1	438	0.0023	-15	c.-34 others(26): Show c.-3484_-3470delTTCATGCTCCTTTTG	LHX3	ENSG00000107187.17	transcript	ENST00000371748.10	protein_coding		3354		chr9	TogoVar
LHX4_chr1_180225264_180283984	180234205	ATATATAT others(8): Show ATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 homoSapiens_chm13v2.hp1 HG02280.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0008 a0001c0001 a0004c0008	a0001c0001t0001 a0004c0008t0017 a0001c0001t0001 a0004c0008t0017	a0001c0001t0001g0109 a0004c0008t0017g0174 a0001c0001t0001g0109 a0004c0008t0017g0174	2	402	0.0050	-15	c.76+ others(30): Show c.76+3601_76+3615delTATATATATATATAT	LHX4	ENSG00000121454.6	transcript	ENST00000263726.4	protein_coding	1/5			chr1	TogoVar
LIFR_chr5_38469668_38561646	38539157	TTCACCGT others(8): Show TTCACCGTGGTCTCGA	T T	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01099.hp2 HG00639.hp1 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0009 a0001c0001t0002g0009	2	374	0.0054	-15	c.-19 others(32): Show c.-19-8506_-19-8492delTCGAGACCACGGTGA	LIFR	ENSG00000113594.10	transcript	ENST00000453190.7	protein_coding	1/19			chr5	TogoVar
LIG1_chr19_48110445_48175344	48166493	CCTCAGGA others(8): Show CCTCAGGAGGGACAGA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00621.hp2 HG01167.hp1 others(66): Show HG00558.hp2 HG00621.hp2 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01981.hp1 HG02015.hp1 HG02040.hp1 HG02129.hp2 HG02145.hp2 HG02148.hp2 HG02257.hp1 HG02258.hp1 HG02293.hp2 HG02451.hp2 HG02723.hp1 HG02886.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp2 HG03688.hp1 HG03831.hp2 HG04184.hp2 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18943.hp2 NA18947.hp1 NA18948.hp2 NA18952.hp1 NA18967.hp1 NA18969.hp2 NA18973.hp1 NA18975.hp1 NA18980.hp2 NA18989.hp1 NA18991.hp1 NA18993.hp2 NA18997.hp2 NA18998.hp1 NA19000.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19011.hp1 NA19056.hp1 NA19057.hp2 NA19064.hp1 NA19065.hp2 NA19067.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp1 NA20129.hp1 NA20300.hp2 NA21309.hp1	a0001 a0008 a0011 a0001 a0008 a0011	a0001c0001 a0001c0002 a0001c0007 others(4): Show a0001c0001 a0001c0002 a0001c0007 a0001c0009 a0001c0018 a0008c0021 a0011c0020	a0001c0001t0001 a0001c0002t0001 a0001c0007t0001 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0007t0001 a0001c0009t0001 a0001c0018t0001 a0008c0021t0001 a0011c0020t0001	a0001c0001t0001g0134 a0001c0002t0001g0001 a0001c0002t0001g0043 others(65): Show a0001c0001t0001g0134 a0001c0002t0001g0001 a0001c0002t0001g0043 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0110 a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0115 a0001c0002t0001g0116 a0001c0002t0001g0117 a0001c0002t0001g0118 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0122 a0001c0002t0001g0123 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0142 a0001c0002t0001g0143 a0001c0002t0001g0144 a0001c0002t0001g0145 a0001c0002t0001g0146 a0001c0002t0001g0147 a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0001g0152 a0001c0002t0001g0153 a0001c0002t0001g0154 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0159 a0001c0002t0001g0161 a0001c0002t0001g0163 a0001c0002t0001g0164 a0001c0002t0001g0165 a0001c0002t0001g0166 a0001c0002t0001g0167 a0001c0002t0001g0172 a0001c0007t0001g0135 a0001c0007t0001g0136 a0001c0007t0001g0137 a0001c0007t0001g0162 a0001c0009t0001g0126 a0001c0009t0001g0160 a0001c0018t0001g0119 a0008c0021t0001g0103 a0011c0020t0001g0151	69	330	0.2091	-15	c.-57 others(30): Show c.-57-885_-57-871delTCTGTCCCTCCTGAG	LIG1	ENSG00000105486.15	transcript	ENST00000263274.12	protein_coding	1/27			chr19	TogoVar
LILRA5_chr19_54302070_54318166	54310120	GAGGGGCT others(8): Show GAGGGGCTCCATCCTC	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00642.hp2 others(53): Show HG00140.hp1 HG00639.hp2 HG00642.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01081.hp2 HG01109.hp1 HG01123.hp2 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01496.hp2 HG01517.hp2 HG01981.hp2 HG02027.hp1 HG02040.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02165.hp2 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02717.hp2 HG02738.hp2 HG02809.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03195.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03491.hp2 HG03540.hp1 HG03579.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG04115.hp1 HG04199.hp1 NA18943.hp2 NA19043.hp2 NA20752.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017	a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0135 others(26): Show a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0002g0148 a0001c0001t0003g0132 a0001c0001t0004g0123 a0001c0001t0004g0124 a0001c0001t0004g0127 a0001c0001t0004g0134 a0001c0001t0005g0002 a0001c0001t0005g0015 a0001c0001t0005g0122 a0001c0001t0005g0129 a0001c0001t0005g0130 a0001c0001t0005g0131 a0001c0001t0005g0133 a0001c0001t0007g0012 a0001c0001t0007g0052 a0001c0001t0007g0200 a0001c0001t0012g0125 a0001c0001t0015g0203 a0001c0001t0016g0201 a0001c0001t0017g0202	56	409	0.1369	-15	c.712 others(32): Show c.712+1279_712+1293delGAGGATGGAGCCCCT	LILRA5	ENSG00000187116.14	transcript	ENST00000432233.8	protein_coding	5/6			chr19	TogoVar
LILRA5_chr19_54302070_54318166	54315366	GAGGCAGG others(8): Show GAGGCAGGAGAATGGC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0059 a0003c0002t0002g0059	1	409	0.0024	-15	c.-23 others(26): Show c.-2362_-2348delGCCATTCTCCTGCCT	LILRA5	ENSG00000187116.14	transcript	ENST00000432233.8	protein_coding		2201		chr19	TogoVar
LILRB3_chr19_54211278_54228007	54212736	GCAGTGGC others(8): Show GCAGTGGCACTATCAT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0007 a0007	a0007c0077 a0007c0077	a0007c0077t0006 a0007c0077t0006	a0007c0077t0006g0148 a0007c0077t0006g0148	1	455	0.0022	-15	c.43 others(26): Show c.4342_*4356delATGATAGTGCCACTG	LILRB3	ENSG00000204577.12	transcript	ENST00000445347.2	protein_coding		3541		chr19	TogoVar
LILRB4_chr19_54657985_54673718	54673499	AGTCTCAC others(8): Show AGTCTCACAGATGGTC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0001 a0003c0010t0001	a0003c0010t0001g0003 a0003c0010t0001g0003	1	487	0.0021	-15	c.54 others(26): Show c.5481_*5495delGTCTCACAGATGGTC	LILRB4	ENSG00000186818.13	transcript	ENST00000695418.1	protein_coding		4782		chr19	TogoVar
LIMA1_chr12_50170788_50288520	50190682	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00438.hp2 others(90): Show HG00099.hp2 HG00140.hp2 HG00438.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG01071.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp2 HG01168.hp2 HG01192.hp2 HG01255.hp1 HG01256.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01978.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp2 HG02129.hp2 HG02132.hp2 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02897.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03130.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp1 HG03579.hp1 HG03579.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp2 HG04204.hp2 HG06807.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18954.hp2 NA18959.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18965.hp2 NA18966.hp2 NA18975.hp1 NA18979.hp1 NA18981.hp1 NA18990.hp1 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA19000.hp2 NA19004.hp2 NA19058.hp1 NA19065.hp1 NA19077.hp2 NA19084.hp1 NA19240.hp1 NA20752.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0004t0003	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(90): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0100 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0180 a0001c0001t0001g0198 a0001c0001t0001g0244 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0043 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0054 a0001c0001t0002g0057 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0079 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0099 a0001c0001t0002g0179 a0001c0001t0003g0038 a0001c0001t0003g0042 a0001c0001t0003g0056 a0001c0001t0003g0058 a0001c0001t0003g0063 a0001c0001t0003g0065 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0090 a0001c0001t0003g0092 a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0170 a0001c0001t0003g0184 a0001c0001t0003g0200 a0001c0001t0005g0004 a0001c0001t0005g0031 a0001c0001t0005g0110 a0001c0001t0005g0113 a0001c0004t0003g0085	93	294	0.3163	-15	c.114 others(34): Show c.1140+1755_1140+1769delAAAAAAAAAAAAAAA	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	9/10			chr12	TogoVar
LIMA1_chr12_50170788_50288520	50239996	AATAACAT others(8): Show AATAACATAACATAAC	A A	intron_variant intron_variant	MODIFIER	NA19000.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0063 a0001c0001t0003g0063	1	294	0.0034	-15	c.120 others(32): Show c.120-8301_120-8287delGTTATGTTATGTTAT	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	2/10			chr12	TogoVar
LIMA1_chr12_50170788_50288520	50240046	CATAACAT others(8): Show CATAACATAACATAAA	C C	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0055 a0001c0001t0002g0055	1	294	0.0034	-15	c.120 others(32): Show c.120-8351_120-8337delTTTATGTTATGTTAT	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	2/10			chr12	TogoVar
LIMA1_chr12_50170788_50288520	50241933	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02129.hp1 HG02572.hp2 others(6): Show HG02109.hp1 HG02129.hp1 HG02572.hp2 HG02622.hp1 HG02717.hp2 HG02897.hp1 HG02976.hp2 HG03130.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0001 a0001c0001t0003 a0001c0001t0005	a0001c0001t0001g0107 a0001c0001t0001g0268 a0001c0001t0003g0104 others(6): Show a0001c0001t0001g0107 a0001c0001t0001g0268 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0003g0109 a0001c0001t0003g0112 a0001c0001t0005g0110 a0001c0001t0005g0113	9	294	0.0306	-15	c.119 others(32): Show c.119+6685_119+6699delAAAAAAAAAAAAAAA	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	2/10			chr12	TogoVar
LIMA1_chr12_50170788_50288520	50261042	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0276 a0001c0001t0001g0276	1	294	0.0034	-15	c.-23 others(34): Show c.-23-12283_-23-12269delAAAAAAAAAAAAAAA	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	1/10			chr12	TogoVar
LIMA1_chr12_50170788_50288520	50262622	GTAAAATA others(8): Show GTAAAATAAAATAAAA	G G	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03225.hp1 NA18986.hp2 others(1): Show HG02572.hp1 HG03225.hp1 NA18986.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 a0001c0001t0001 a0001c0001t0005 a0001c0001t0010	a0001c0001t0001g0005 a0001c0001t0005g0003 a0001c0001t0005g0004 others(1): Show a0001c0001t0001g0005 a0001c0001t0005g0003 a0001c0001t0005g0004 a0001c0001t0010g0091	4	294	0.0136	-15	c.-23 others(34): Show c.-23-13863_-23-13849delTTTTATTTTATTTTA	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	1/10			chr12	TogoVar
LIMA1_chr12_50170788_50288520	50270604	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0104 a0001c0001t0003g0104	1	294	0.0034	-15	c.-24 others(34): Show c.-24+12801_-24+12815delTTTTTTTTTTTTTTT	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	1/10			chr12	TogoVar
LIMCH1_chr4_41533157_41705044	41574230	ATCCCCTC others(8): Show ATCCCCTCCCCTCCCC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02258.hp1 HG02717.hp2 others(9): Show HG02109.hp1 HG02258.hp1 HG02717.hp2 HG02809.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG03130.hp1 HG03195.hp1 HG03471.hp1 HG03704.hp2 NA19030.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0011 a0017	a0001c0001 a0001c0013 a0002c0002 others(5): Show a0001c0001 a0001c0013 a0002c0002 a0003c0003 a0004c0005 a0005c0018 a0011c0016 a0017c0024	a0001c0001t0001 a0001c0001t0002 a0001c0013t0002 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0013t0002 a0002c0002t0018 a0003c0003t0004 a0004c0005t0011 a0005c0018t0001 a0005c0018t0010 a0011c0016t0010 a0017c0024t0001	a0001c0001t0001g0052 a0001c0001t0001g0078 a0001c0001t0002g0002 others(9): Show a0001c0001t0001g0052 a0001c0001t0001g0078 a0001c0001t0002g0002 a0001c0013t0002g0067 a0002c0002t0018g0106 a0002c0002t0018g0107 a0003c0003t0004g0131 a0004c0005t0011g0146 a0005c0018t0001g0069 a0005c0018t0010g0073 a0011c0016t0010g0077 a0017c0024t0001g0079	12	154	0.0779	-15	c.-24 others(36): Show c.-240-24632_-240-24618delCCCTCCCCTCCCCTC	LIMCH1	ENSG00000064042.18	transcript	ENST00000503057.6	protein_coding	1/31		INFO_REALIGN_3_PRIME	chr4	TogoVar
LIMK2_chr22_31207298_31285080	31226178	CTTATTTT others(8): Show CTTATTTTATTTTATT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0271 a0001c0001t0001g0271	1	358	0.0028	-15	c.116 others(30): Show c.116+389_116+403delTTTATTTTATTTTAT	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMK2_chr22_31207298_31285080	31255978	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02293.hp2 HG02809.hp2 others(1): Show HG01934.hp2 HG02293.hp2 HG02809.hp2 HG02970.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0001c0003 a0002c0002	a0001c0003t0003 a0002c0002t0001 a0001c0003t0003 a0002c0002t0001	a0001c0003t0003g0193 a0001c0003t0003g0207 a0002c0002t0001g0243 others(1): Show a0001c0003t0003g0193 a0001c0003t0003g0207 a0002c0002t0001g0243 a0002c0002t0001g0244	4	358	0.0112	-15	c.117 others(32): Show c.117-2289_117-2275delTTTTTTTTTTTTTTT	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMK2_chr22_31207298_31285080	31257040	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0178 a0001c0003t0003g0178	1	358	0.0028	-15	c.117 others(32): Show c.117-1231_117-1217delTTTTTTTTTTTTTTT	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMK2_chr22_31207298_31285080	31276468	CGGCGGCG others(8): Show CGGCGGCGGCCGCAGG	C C	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01074.hp1 HG01167.hp1 others(4): Show HG01070.hp2 HG01074.hp1 HG01167.hp1 HG02258.hp1 HG02896.hp2 HG02897.hp1 HG03831.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0022 a0002c0002t0001g0212 a0002c0002t0001g0219 others(4): Show a0002c0002t0001g0022 a0002c0002t0001g0212 a0002c0002t0001g0219 a0002c0002t0001g0233 a0002c0002t0001g0235 a0002c0002t0001g0238 a0002c0002t0001g0245	7	358	0.0196	-15	c.177 others(34): Show c.1772+1163_1772+1177delCGGCGGCCGCAGGGG	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMS1_chr2_108529470_108692246	108600891	TTCTTCTC others(8): Show TTCTTCTCTTCTCTTC	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0125 a0001c0001t0002g0125	1	246	0.0041	-15	c.33- others(32): Show c.33-58684_33-58670delCTCTTCTCTTCTCTT	LIMS1	ENSG00000169756.17	transcript	ENST00000544547.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIMS2_chr2_127633426_127680530	127668668	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0211 a0001c0002t0001g0211	1	348	0.0029	-15	c.11+ others(30): Show c.11+6331_11+6345delTTTTTTTTTTTTTTT	LIMS2	ENSG00000072163.20	transcript	ENST00000355119.9	protein_coding	1/9			chr2	TogoVar
LIN28A_chr1_26405817_26434728	26407715	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp2 HG03492.hp2 HG03654.hp1 HG03490.hp2 HG03492.hp2 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0016 a0001c0001t0002g0125 a0001c0001t0005g0119 a0001c0001t0002g0016 a0001c0001t0002g0125 a0001c0001t0005g0119	3	376	0.0080	-15	c.-31 others(26): Show c.-3176_-3162delAAAAAAAAAAAAAAG	LIN28A	ENSG00000131914.11	transcript	ENST00000326279.11	protein_coding		3101		chr1	TogoVar
LIN54_chr4_82919603_83015823	82922710	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp1 HG01884.hp1 HG02523.hp2 others(2): Show HG01256.hp1 HG01884.hp1 HG02523.hp2 NA18948.hp2 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0022 a0001c0001t0003 a0001c0001t0022	a0001c0001t0003g0146 a0001c0001t0003g0149 a0001c0001t0003g0171 others(2): Show a0001c0001t0003g0146 a0001c0001t0003g0149 a0001c0001t0003g0171 a0001c0001t0003g0174 a0001c0001t0022g0128	5	304	0.0165	-15	c.53 others(26): Show c.5377_*5391delAAAAAAAAAAAAAAA	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding		1892		chr4	TogoVar
LIN9_chr1_226226157_226314164	226252695	AGGTGTGG others(8): Show AGGTGTGGTAGCTCAC	A A	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0113 a0001c0001t0003g0113	1	364	0.0028	-15	c.103 others(34): Show c.1039-1791_1039-1777delGTGAGCTACCACACC	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	10/14			chr1	TogoVar
LIN9_chr1_226226157_226314164	226258894	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG03017.hp2 HG03704.hp1 others(13): Show HG02040.hp1 HG03017.hp2 HG03704.hp1 HG03704.hp2 HG03927.hp1 NA18941.hp2 NA18949.hp2 NA18962.hp2 NA18966.hp2 NA18972.hp2 NA18984.hp2 NA18986.hp2 NA18990.hp1 NA19011.hp2 NA19064.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 others(13): Show a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0001g0357 a0001c0001t0001g0358 a0001c0001t0001g0359 a0001c0001t0001g0360	16	364	0.0440	-15	c.103 others(34): Show c.1038+6624_1038+6638delTTTTTTTTTTTTTTT	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	10/14			chr1	TogoVar
LIN9_chr1_226226157_226314164	226305315	GAAAAAAA others(8): Show GAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	364	0.0028	-15	c.31+ others(30): Show c.31+3779_31+3793delTTTTTTTTTTTTTTT	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	1/14			chr1	TogoVar
LINGO1_chr15_77608027_77637912	77619702	TAAATAAA others(8): Show TAAATAAAATAAAATA	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0062 a0001c0002t0004g0062	1	386	0.0026	-15	c.7-3 others(28): Show c.7-3817_7-3803delTATTTTATTTTATTT	LINGO1	ENSG00000169783.13	transcript	ENST00000355300.7	protein_coding	1/1			chr15	TogoVar
LINGO1_chr15_77608027_77637912	77632403	CCCTCCTC others(8): Show CCCTCCTCCGTTTCCT	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02965.hp1 HG03130.hp1 HG02965.hp1 HG03130.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0018 a0001c0003t0018	a0001c0003t0018g0190 a0001c0003t0018g0191 a0001c0003t0018g0190 a0001c0003t0018g0191	2	386	0.0052	-15	c.-10 others(23): Show c.-103_-89delAGGAAACGGAGGAGG	LINGO1	ENSG00000169783.13	transcript	ENST00000355300.7	protein_coding	1/2	89		chr15	TogoVar
LINGO1_chr15_77608027_77637912	77632926	GGAGGGAG others(8): Show GGAGGGAGGAGGGATC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp1 HG03453.hp1 NA20300.hp1 HG03195.hp1 HG03453.hp1 NA20300.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0005 a0001c0003t0002g0005	3	386	0.0078	-15	c.-62 others(24): Show c.-626_-612delGATCCCTCCTCCCTC	LINGO1	ENSG00000169783.13	transcript	ENST00000355300.7	protein_coding		15		chr15	TogoVar
LINGO2_chr9_27932617_29218601	28441251	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0014 a0001c0001t0002g0014	1	62	0.0161	-15	c.-22 others(36): Show c.-228+34674_-228+34688delAAAAAAAAAAAAAAA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28601548	TGTGGCAA others(8): Show TGTGGCAATTGAGTGA	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp2 HG00639.hp1 others(32): Show HG00438.hp2 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00741.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01261.hp1 HG01261.hp2 HG02027.hp2 HG02056.hp1 HG02451.hp1 HG02572.hp1 HG02630.hp1 HG02630.hp2 HG02809.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03486.hp2 HG06807.hp2 NA18990.hp1 NA18995.hp1 NA19043.hp1 NA19060.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016 a0001c0001t0019 a0001c0001t0021 a0001c0001t0023 a0001c0001t0026 a0001c0001t0028 a0001c0001t0032 a0001c0001t0034 a0001c0001t0035 a0001c0003t0009 a0001c0004t0005	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 others(32): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0029 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0002g0014 a0001c0001t0002g0044 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0005g0057 a0001c0001t0005g0059 a0001c0001t0006g0003 a0001c0001t0006g0004 a0001c0001t0007g0009 a0001c0001t0008g0020 a0001c0001t0008g0040 a0001c0001t0009g0056 a0001c0001t0011g0002 a0001c0001t0012g0005 a0001c0001t0014g0008 a0001c0001t0016g0011 a0001c0001t0019g0053 a0001c0001t0021g0051 a0001c0001t0023g0037 a0001c0001t0026g0013 a0001c0001t0028g0038 a0001c0001t0032g0023 a0001c0001t0034g0061 a0001c0001t0035g0060 a0001c0003t0009g0036 a0001c0004t0005g0054	35	62	0.5645	-15	c.-31 others(36): Show c.-314+68637_-314+68651delTCACTCAATTGCCAC	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	3/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28769516	ATATTTTT others(8): Show ATATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0055 a0001c0001t0025g0055	1	62	0.0161	-15	c.-39 others(36): Show c.-394-99251_-394-99237delAAAAAAAAAAAAATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	29071154	TTATTGTA others(8): Show TTATTGTATTGTATTG	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0048	1	62	0.0161	-15	c.-49 others(38): Show c.-491-123255_-491-123241delCAATACAATACAATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/6			chr9	TogoVar
LINS1_chr15_100561924_100607184	100603145	GCCCCTTT others(8): Show GCCCCTTTCCTGAGCT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG02055.hp2 others(2): Show HG01167.hp1 HG01169.hp1 HG02055.hp2 HG02976.hp1 HG03579.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0011 a0005c0006t0011	a0005c0006t0011g0010 a0005c0006t0011g0176 a0005c0006t0011g0010 a0005c0006t0011g0176	5	430	0.0116	-15	c.-11 others(26): Show c.-1143_-1129delAGCTCAGGAAAGGGG	LINS1	ENSG00000140471.17	transcript	ENST00000314742.13	protein_coding		962		chr15	TogoVar
LIPA_chr10_89208572_89256775	89213292	TAAAGAAA others(8): Show TAAAGAAAAGAAAAGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 NA21309.hp2 HG03130.hp2 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0006 a0003c0003t0001 a0001c0001t0006 a0003c0003t0001	a0001c0001t0006g0276 a0003c0003t0001g0317 a0001c0001t0006g0276 a0003c0003t0001g0317	2	384	0.0052	-15	c.15 others(26): Show c.1521_*1535delTCTTTTCTTTTCTTT	LIPA	ENSG00000107798.18	transcript	ENST00000336233.10	protein_coding		279		chr10	TogoVar
LIPG_chr18_49557057_49604185	49576457	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02559.hp1 others(8): Show HG01243.hp2 HG01884.hp1 HG02559.hp1 HG02559.hp2 HG02723.hp1 HG02809.hp1 HG02818.hp2 HG02922.hp1 HG02976.hp1 HG03041.hp1 HG03516.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0024 a0001c0001t0026 a0001c0001t0048 others(6): Show a0001c0001t0024 a0001c0001t0026 a0001c0001t0048 a0001c0001t0076 a0001c0001t0081 a0001c0001t0082 a0001c0001t0141 a0004c0006t0087 a0004c0006t0088	a0001c0001t0024g0046 a0001c0001t0024g0047 a0001c0001t0024g0048 others(8): Show a0001c0001t0024g0046 a0001c0001t0024g0047 a0001c0001t0024g0048 a0001c0001t0026g0270 a0001c0001t0048g0271 a0001c0001t0076g0049 a0001c0001t0081g0269 a0001c0001t0082g0272 a0001c0001t0141g0250 a0004c0006t0087g0170 a0004c0006t0088g0169	11	384	0.0287	-15	c.793 others(30): Show c.793+880_793+894delTTTTTTTTTTTTTTT	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579764	CTTTCTTT others(8): Show CTTTCTTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00609.hp2 HG01243.hp2 others(42): Show HG00558.hp2 HG00609.hp2 HG01243.hp2 HG02015.hp2 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02132.hp1 HG02155.hp2 HG02559.hp2 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02922.hp1 HG03710.hp1 HG03942.hp2 HG04184.hp2 HG06807.hp2 NA18939.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18974.hp1 NA18981.hp1 NA18991.hp2 NA18998.hp2 NA19005.hp1 NA19007.hp2 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19063.hp2 NA19064.hp2 NA19067.hp1 NA19079.hp1 NA19087.hp2 NA19091.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0011 a0002c0002 a0001c0001 a0001c0011 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 a0001c0001t0024 a0001c0001t0027 a0001c0001t0033 a0001c0001t0048 a0001c0001t0076 a0001c0001t0095 a0001c0011t0068 a0002c0002t0004 a0002c0002t0020 a0002c0002t0022 a0002c0002t0023 a0002c0002t0030 a0002c0002t0063 a0002c0002t0064 a0002c0002t0066 a0002c0002t0069 a0002c0002t0130	a0001c0001t0001g0052 a0001c0001t0001g0213 a0001c0001t0001g0214 others(42): Show a0001c0001t0001g0052 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0227 a0001c0001t0002g0094 a0001c0001t0018g0071 a0001c0001t0018g0130 a0001c0001t0018g0141 a0001c0001t0024g0046 a0001c0001t0024g0047 a0001c0001t0024g0048 a0001c0001t0027g0216 a0001c0001t0033g0276 a0001c0001t0048g0271 a0001c0001t0076g0049 a0001c0001t0095g0026 a0001c0011t0068g0380 a0002c0002t0004g0297 a0002c0002t0004g0299 a0002c0002t0004g0300 a0002c0002t0004g0301 a0002c0002t0004g0306 a0002c0002t0004g0311 a0002c0002t0004g0312 a0002c0002t0004g0314 a0002c0002t0004g0316 a0002c0002t0004g0318 a0002c0002t0004g0319 a0002c0002t0004g0320 a0002c0002t0020g0309 a0002c0002t0020g0310 a0002c0002t0022g0305 a0002c0002t0022g0317 a0002c0002t0022g0321 a0002c0002t0023g0307 a0002c0002t0023g0313 a0002c0002t0023g0329 a0002c0002t0030g0315 a0002c0002t0030g0322 a0002c0002t0063g0304 a0002c0002t0064g0379 a0002c0002t0066g0303 a0002c0002t0069g0331 a0002c0002t0130g0171	45	384	0.1172	-15	c.794 others(32): Show c.794-1608_794-1594delTCTTTTCTTTTCTTT	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49580239	ACCAACTG others(8): Show ACCAACTGTCTCTATG	A A	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0006 a0006	a0006c0008 a0006c0008	a0006c0008t0008 a0006c0008t0008	a0006c0008t0008g0295 a0006c0008t0008g0295	1	384	0.0026	-15	c.794 others(32): Show c.794-1175_794-1161delCCAACTGTCTCTATG	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9			chr18	TogoVar
LIPH_chr3_185501262_185557588	185506830	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0152 a0001c0001t0030g0152	1	358	0.0028	-15	c.19 others(26): Show c.1945_*1959delTTTTTTTTTTTTTTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	10/10	1945		chr3	TogoVar

Search by Variant

Search

Search Results