Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LRP1B_chr2_140226423_142136016	141291855	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02486.hp2 HG02723.hp1 others(1): Show HG01261.hp1 HG02486.hp2 HG02723.hp1 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0007 a0001c0011 others(1): Show a0001c0002 a0001c0007 a0001c0011 a0001c0024	a0001c0002t0010 a0001c0007t0003 a0001c0011t0001 others(1): Show a0001c0002t0010 a0001c0007t0003 a0001c0011t0001 a0001c0024t0005	a0001c0002t0010g0022 a0001c0007t0003g0003 a0001c0011t0001g0014 others(1): Show a0001c0002t0010g0022 a0001c0007t0003g0003 a0001c0011t0001g0014 a0001c0024t0005g0009	4	28	0.1429	-15	c.344 others(34): Show c.344-37229_344-37215delTTTTTTTTTTTTTTT		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90						chr2	TogoVar
LRP1B_chr2_140226423_142136016	141513728	AAAAATAA others(8): Show AAAAATAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03516.hp1 NA19240.hp2 HG02965.hp1 HG03516.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0027 a0001c0001 a0001c0013 a0001c0027	a0001c0001t0006 a0001c0013t0002 a0001c0027t0001 a0001c0001t0006 a0001c0013t0002 a0001c0027t0001	a0001c0001t0006g0024 a0001c0013t0002g0012 a0001c0027t0001g0021 a0001c0001t0006g0024 a0001c0013t0002g0012 a0001c0027t0001g0021	3	28	0.1071	-15	c.206 others(34): Show c.206-33210_206-33196delATTTTATTTTATTTT		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90						chr2	TogoVar
LRP1B_chr2_140226423_142136016	141743479	CTTTTTTC others(8): Show CTTTTTTCTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG03516.hp1 HG01261.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0006 a0001c0007t0003 a0001c0001t0006 a0001c0007t0003	a0001c0001t0006g0024 a0001c0007t0003g0003 a0001c0001t0006g0024 a0001c0007t0003g0003	2	28	0.0714	-15	c.205 others(34): Show c.205+66785_205+66799delAAAAAAAAGAAAAAA		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90						chr2	TogoVar
LRP1B_chr2_140226423_142136016	141909526	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0024 a0001c0001t0006g0024	1	28	0.0357	-15	c.83- others(32): Show c.83-99140_83-99126delAAAAAAAAAAAAAAA		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	1/90						chr2	TogoVar
LRP1B_chr2_140226423_142136016	142010554	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02965.hp1 HG02630.hp1 HG02965.hp1	a0001 a0001	a0001c0010 a0001c0027 a0001c0010 a0001c0027	a0001c0010t0011 a0001c0027t0001 a0001c0010t0011 a0001c0027t0001	a0001c0010t0011g0028 a0001c0027t0001g0021 a0001c0010t0011g0028 a0001c0027t0001g0021	2	28	0.0714	-15	c.82+ others(34): Show c.82+120079_82+120093delTTTTTTTTTTTTTTT		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	1/90						chr2	TogoVar
LRP1_chr12_57123483_57218361	57128215	AGCCAGGG others(8): Show AGCCAGGGGAGAGGGC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp1 NA19240.hp1 HG03098.hp1 NA19240.hp1	a0001 a0001	a0001c0057 a0001c0060 a0001c0057 a0001c0060	a0001c0057t0010 a0001c0060t0009 a0001c0057t0010 a0001c0060t0009	a0001c0057t0010g0190 a0001c0060t0009g0189 a0001c0057t0010g0190 a0001c0060t0009g0189	2	276	0.0073	-15	c.-74 others(24): Show c.-749_-735delGCCAGGGGAGAGGGC		LRP1	ENSG00000123384.14	transcript	ENST00000243077.8	protein_coding					267		chr12	TogoVar
LRP2BP_chr4_185358872_185400924	185369372	CATGCCTG others(8): Show CATGCCTGGCTAATTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG00423.hp2 others(94): Show HG00140.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp2 HG00621.hp1 HG00733.hp2 HG00741.hp1 HG01074.hp1 HG01099.hp2 HG01123.hp2 HG01167.hp2 HG01192.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03942.hp2 HG04115.hp2 HG04184.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp2 NA18941.hp1 NA18951.hp1 NA18955.hp2 NA18957.hp1 NA18963.hp1 NA18970.hp2 NA18971.hp1 NA18974.hp1 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18988.hp2 NA18990.hp1 NA18997.hp1 NA19010.hp2 NA19012.hp1 NA19057.hp1 NA19062.hp2 NA19070.hp2 NA19074.hp1 NA19085.hp1 NA20300.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0027 a0001c0002t0002 a0001c0002t0005 others(32): Show a0001c0001t0027 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0002t0008 a0001c0002t0013 a0001c0002t0016 a0001c0002t0018 a0001c0002t0020 a0001c0002t0024 a0001c0002t0031 a0001c0002t0036 a0001c0002t0037 a0001c0002t0039 a0001c0002t0041 a0001c0002t0052 a0001c0002t0053 a0001c0002t0054 a0001c0002t0055 a0001c0002t0056 a0001c0002t0057 a0001c0002t0058 a0001c0002t0059 a0001c0002t0086 a0001c0002t0088 a0001c0002t0089 a0001c0002t0091 a0001c0002t0110 a0001c0002t0111 a0001c0002t0112 a0001c0002t0113 a0001c0002t0114 a0001c0002t0115 a0001c0002t0119 a0001c0004t0005	a0001c0001t0027g0071 a0001c0001t0027g0072 a0001c0002t0002g0082 others(91): Show a0001c0001t0027g0071 a0001c0001t0027g0072 a0001c0002t0002g0082 a0001c0002t0002g0092 a0001c0002t0002g0118 a0001c0002t0002g0119 a0001c0002t0002g0130 a0001c0002t0002g0175 a0001c0002t0002g0176 a0001c0002t0002g0181 a0001c0002t0002g0182 a0001c0002t0002g0184 a0001c0002t0002g0185 a0001c0002t0002g0186 a0001c0002t0002g0189 a0001c0002t0002g0191 a0001c0002t0002g0192 a0001c0002t0002g0193 a0001c0002t0002g0194 a0001c0002t0002g0195 a0001c0002t0002g0202 a0001c0002t0002g0204 a0001c0002t0002g0213 a0001c0002t0002g0218 a0001c0002t0005g0011 a0001c0002t0005g0302 a0001c0002t0005g0303 a0001c0002t0005g0322 a0001c0002t0005g0323 a0001c0002t0005g0324 a0001c0002t0005g0327 a0001c0002t0007g0098 a0001c0002t0007g0131 a0001c0002t0007g0183 a0001c0002t0007g0187 a0001c0002t0007g0197 a0001c0002t0007g0199 a0001c0002t0007g0201 a0001c0002t0007g0206 a0001c0002t0008g0007 a0001c0002t0008g0074 a0001c0002t0008g0139 a0001c0002t0008g0167 a0001c0002t0008g0171 a0001c0002t0008g0173 a0001c0002t0008g0196 a0001c0002t0013g0258 a0001c0002t0013g0259 a0001c0002t0013g0263 a0001c0002t0013g0280 a0001c0002t0013g0282 a0001c0002t0013g0283 a0001c0002t0016g0291 a0001c0002t0016g0294 a0001c0002t0016g0295 a0001c0002t0016g0297 a0001c0002t0016g0301 a0001c0002t0018g0046 a0001c0002t0018g0048 a0001c0002t0018g0050 a0001c0002t0020g0083 a0001c0002t0020g0128 a0001c0002t0020g0226 a0001c0002t0024g0257 a0001c0002t0024g0260 a0001c0002t0024g0262 a0001c0002t0031g0188 a0001c0002t0031g0200 a0001c0002t0036g0298 a0001c0002t0036g0305 a0001c0002t0037g0009 a0001c0002t0039g0331 a0001c0002t0039g0332 a0001c0002t0041g0012 a0001c0002t0052g0032 a0001c0002t0053g0049 a0001c0002t0054g0031 a0001c0002t0055g0018 a0001c0002t0056g0044 a0001c0002t0057g0040 a0001c0002t0058g0043 a0001c0002t0059g0053 a0001c0002t0086g0127 a0001c0002t0088g0075 a0001c0002t0089g0198 a0001c0002t0091g0229 a0001c0002t0110g0292 a0001c0002t0111g0270 a0001c0002t0112g0266 a0001c0002t0113g0272 a0001c0002t0114g0276 a0001c0002t0115g0265 a0001c0002t0119g0335 a0001c0004t0005g0326	97	348	0.2787	-15	c.978 others(32): Show c.978+1253_978+1267delAAATTAGCCAGGCAT		LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	8/8						chr4	TogoVar
LRP2_chr2_169122109_169367534	169190523	CGCCTGTT others(8): Show CGCCTGTTGATGAGCT	C C	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0031 a0031	a0031c0053 a0031c0053	a0031c0053t0003 a0031c0053t0003	a0031c0053t0003g0096 a0031c0053t0003g0096	1	250	0.0040	-15	c.903 others(34): Show c.9032+1294_9032+1308delAGCTCATCAACAGGC		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	48/78						chr2	TogoVar
LRP2_chr2_169122109_169367534	169299086	GGAAAGAA others(8): Show GGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	NA18966.hp1 NA18966.hp1	a0001 a0001	a0001c0106 a0001c0106	a0001c0106t0001 a0001c0106t0001	a0001c0106t0001g0055 a0001c0106t0001g0055	1	250	0.0040	-15	c.428 others(32): Show c.428-4391_428-4377delTTCTTTCTTTCTTTC		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	4/78						chr2	TogoVar
LRP2_chr2_169122109_169367534	169338389	AAAGAAAG others(8): Show AAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	NA18968.hp1 NA18982.hp1 NA18968.hp1 NA18982.hp1	a0007 a0058 a0007 a0058	a0007c0127 a0058c0128 a0007c0127 a0058c0128	a0007c0127t0001 a0058c0128t0002 a0007c0127t0001 a0058c0128t0002	a0007c0127t0001g0178 a0058c0128t0002g0159 a0007c0127t0001g0178 a0058c0128t0002g0159	2	250	0.0080	-15	c.80- others(32): Show c.80-17520_80-17506delCTTTCTTTCTTTCTT		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78						chr2	TogoVar
LRP2_chr2_169122109_169367534	169357289	TTTTTATT others(8): Show TTTTTATTTTATTTTA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00423.hp1 HG00438.hp1 others(40): Show HG00099.hp1 HG00423.hp1 HG00438.hp1 HG00639.hp2 HG00738.hp1 HG00738.hp2 HG01070.hp2 HG01074.hp1 HG01099.hp2 HG01106.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01361.hp1 HG01952.hp2 HG02148.hp2 HG02572.hp1 HG02615.hp1 HG02683.hp1 HG02723.hp2 HG02735.hp1 HG02818.hp1 HG02886.hp2 HG03453.hp1 HG03491.hp1 HG03516.hp2 HG03669.hp1 HG03704.hp1 HG04199.hp2 HG04204.hp1 NA18950.hp1 NA18953.hp2 NA18955.hp1 NA18964.hp2 NA18969.hp1 NA18982.hp2 NA18998.hp1 NA19009.hp2 NA19079.hp2 NA19090.hp2 NA19240.hp1 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 others(17): Show a0001 a0002 a0003 a0004 a0006 a0007 a0008 a0009 a0010 a0011 a0013 a0016 a0021 a0022 a0025 a0036 a0041 a0042 a0048 a0065	a0001c0001 a0001c0002 a0001c0005 others(33): Show a0001c0001 a0001c0002 a0001c0005 a0001c0009 a0001c0010 a0001c0013 a0001c0027 a0001c0048 a0001c0060 a0001c0090 a0001c0099 a0001c0182 a0002c0036 a0002c0166 a0003c0023 a0003c0056 a0004c0011 a0006c0004 a0007c0032 a0008c0020 a0009c0051 a0009c0107 a0010c0008 a0010c0029 a0011c0054 a0011c0092 a0013c0169 a0016c0037 a0021c0087 a0022c0085 a0025c0147 a0036c0045 a0041c0041 a0042c0084 a0048c0140 a0065c0176	a0001c0001t0001 a0001c0002t0001 a0001c0005t0002 others(35): Show a0001c0001t0001 a0001c0002t0001 a0001c0005t0002 a0001c0009t0001 a0001c0010t0001 a0001c0013t0001 a0001c0027t0001 a0001c0048t0002 a0001c0060t0003 a0001c0090t0007 a0001c0099t0001 a0001c0182t0001 a0002c0036t0001 a0002c0166t0014 a0003c0023t0001 a0003c0023t0002 a0003c0056t0008 a0004c0011t0002 a0006c0004t0003 a0007c0032t0008 a0008c0020t0012 a0009c0051t0003 a0009c0107t0003 a0010c0008t0002 a0010c0008t0003 a0010c0029t0001 a0011c0054t0002 a0011c0092t0006 a0013c0169t0004 a0016c0037t0001 a0021c0087t0005 a0022c0085t0001 a0025c0147t0002 a0036c0045t0007 a0041c0041t0002 a0042c0084t0005 a0048c0140t0004 a0065c0176t0015	a0001c0001t0001g0042 a0001c0001t0001g0105 a0001c0002t0001g0067 others(40): Show a0001c0001t0001g0042 a0001c0001t0001g0105 a0001c0002t0001g0067 a0001c0002t0001g0091 a0001c0005t0002g0058 a0001c0009t0001g0016 a0001c0009t0001g0024 a0001c0010t0001g0039 a0001c0013t0001g0063 a0001c0027t0001g0048 a0001c0048t0002g0041 a0001c0060t0003g0116 a0001c0090t0007g0040 a0001c0099t0001g0107 a0001c0182t0001g0249 a0002c0036t0001g0111 a0002c0036t0001g0118 a0002c0166t0014g0112 a0003c0023t0001g0062 a0003c0023t0002g0044 a0003c0056t0008g0068 a0004c0011t0002g0064 a0004c0011t0002g0093 a0006c0004t0003g0043 a0007c0032t0008g0082 a0008c0020t0012g0110 a0009c0051t0003g0061 a0009c0107t0003g0109 a0010c0008t0002g0108 a0010c0008t0003g0060 a0010c0029t0001g0050 a0011c0054t0002g0090 a0011c0092t0006g0059 a0013c0169t0004g0049 a0016c0037t0001g0094 a0021c0087t0005g0117 a0022c0085t0001g0092 a0025c0147t0002g0065 a0036c0045t0007g0077 a0041c0041t0002g0038 a0042c0084t0005g0081 a0048c0140t0004g0066 a0065c0176t0015g0076	43	250	0.1720	-15	c.79+ others(30): Show c.79+5017_79+5031delTAAAATAAAATAAAA		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78						chr2	TogoVar
LRP4_chr11_46851717_46923550	46897353	TATTTTTT others(8): Show TATTTTTTTATTTTTA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02451.hp1 HG03017.hp1 others(1): Show HG01099.hp1 HG02451.hp1 HG03017.hp1 NA18947.hp1	a0002 a0003 a0002 a0003	a0002c0001 a0003c0003 a0002c0001 a0003c0003	a0002c0001t0002 a0003c0003t0011 a0002c0001t0002 a0003c0003t0011	a0002c0001t0002g0035 a0002c0001t0002g0045 a0002c0001t0002g0065 others(1): Show a0002c0001t0002g0035 a0002c0001t0002g0045 a0002c0001t0002g0065 a0003c0003t0011g0008	4	276	0.0145	-15	c.797 others(30): Show c.797-374_797-360delTAAAAATAAAAAAAT		LRP4	ENSG00000134569.10	transcript	ENST00000378623.6	protein_coding	7/37						chr11	TogoVar
LRP5_chr11_68307591_68454275	68443560	TATATATA others(8): Show TATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02630.hp2 HG03540.hp1 others(1): Show HG02622.hp2 HG02630.hp2 HG03540.hp1 NA20300.hp2	a0001 a0001	a0001c0005 a0001c0026 a0001c0042 a0001c0005 a0001c0026 a0001c0042	a0001c0005t0001 a0001c0026t0001 a0001c0042t0001 a0001c0005t0001 a0001c0026t0001 a0001c0042t0001	a0001c0005t0001g0001 a0001c0005t0001g0209 a0001c0026t0001g0050 others(1): Show a0001c0005t0001g0001 a0001c0005t0001g0209 a0001c0026t0001g0050 a0001c0042t0001g0178	4	212	0.0189	-15	c.448 others(34): Show c.4489-2875_4489-2861delATATATATATATATA		LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	21/22						chr11	TogoVar
LRP6_chr12_12111025_12272044	12120028	TATATATA others(8): Show TATATATATATATATA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0051 a0001c0001t0066g0051	1	262	0.0038	-15	c.10 others(26): Show c.1083_*1097delTATATATATATATAT		LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	23/23				1083		chr12	TogoVar
LRP6_chr12_12111025_12272044	12164919	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01106.hp2 HG01123.hp2 others(51): Show HG00735.hp2 HG01106.hp2 HG01123.hp2 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01257.hp2 HG01515.hp1 HG01884.hp1 HG01891.hp1 HG01952.hp2 HG01975.hp2 HG02055.hp2 HG02129.hp1 HG02145.hp2 HG02165.hp2 HG02523.hp1 HG02572.hp1 HG02615.hp2 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp2 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03492.hp1 HG03516.hp1 HG03654.hp2 HG03831.hp1 HG03927.hp1 NA18522.hp1 NA18946.hp1 NA18954.hp1 NA18960.hp2 NA18964.hp2 NA18989.hp2 NA18997.hp2 NA19006.hp2 NA19043.hp1 NA19076.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19090.hp1 NA20129.hp2 NA20300.hp2	a0001 a0004 a0009 a0001 a0004 a0009	a0001c0001 a0001c0003 a0001c0019 others(2): Show a0001c0001 a0001c0003 a0001c0019 a0004c0007 a0009c0012	a0001c0001t0004 a0001c0001t0006 a0001c0001t0012 others(17): Show a0001c0001t0004 a0001c0001t0006 a0001c0001t0012 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0022 a0001c0001t0037 a0001c0001t0047 a0001c0001t0066 a0001c0001t0070 a0001c0001t0071 a0001c0001t0091 a0001c0003t0024 a0001c0003t0035 a0001c0019t0051 a0004c0007t0004 a0004c0007t0017 a0009c0012t0015	a0001c0001t0004g0030 a0001c0001t0004g0032 a0001c0001t0004g0152 others(51): Show a0001c0001t0004g0030 a0001c0001t0004g0032 a0001c0001t0004g0152 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0006g0025 a0001c0001t0006g0026 a0001c0001t0006g0027 a0001c0001t0006g0033 a0001c0001t0006g0037 a0001c0001t0006g0054 a0001c0001t0006g0062 a0001c0001t0006g0073 a0001c0001t0012g0039 a0001c0001t0012g0044 a0001c0001t0012g0063 a0001c0001t0012g0064 a0001c0001t0012g0065 a0001c0001t0012g0166 a0001c0001t0015g0053 a0001c0001t0015g0059 a0001c0001t0015g0061 a0001c0001t0015g0235 a0001c0001t0017g0035 a0001c0001t0017g0036 a0001c0001t0017g0038 a0001c0001t0018g0034 a0001c0001t0018g0040 a0001c0001t0018g0060 a0001c0001t0018g0066 a0001c0001t0019g0068 a0001c0001t0019g0237 a0001c0001t0019g0244 a0001c0001t0022g0047 a0001c0001t0022g0055 a0001c0001t0022g0056 a0001c0001t0037g0041 a0001c0001t0037g0069 a0001c0001t0047g0003 a0001c0001t0066g0051 a0001c0001t0070g0058 a0001c0001t0071g0067 a0001c0001t0091g0045 a0001c0003t0024g0213 a0001c0003t0024g0214 a0001c0003t0024g0215 a0001c0003t0035g0210 a0001c0003t0035g0211 a0001c0019t0051g0008 a0004c0007t0004g0031 a0004c0007t0004g0052 a0004c0007t0004g0075 a0004c0007t0017g0048 a0009c0012t0015g0049	54	262	0.2061	-15	c.176 others(32): Show c.1762+145_1762+159delTTTTTTTTTTTTTTT		LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	8/22						chr12	TogoVar
LRP6_chr12_12111025_12272044	12205325	CAAACAAA others(8): Show CAAACAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG04184.hp2 HG01069.hp2 HG04184.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0049 a0001c0005t0056 a0001c0005t0049 a0001c0005t0056	a0001c0005t0049g0017 a0001c0005t0056g0208 a0001c0005t0049g0017 a0001c0005t0056g0208	2	262	0.0076	-15	c.450 others(32): Show c.450-1940_450-1926delTTTTTTTTTTTGTTT		LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	2/22						chr12	TogoVar
LRPPRC_chr2_43881224_44000989	43896210	CTTTCTTT others(8): Show CTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0007 a0001c0018t0007	a0001c0018t0007g0088 a0001c0018t0007g0088	1	358	0.0028	-15	c.390 others(32): Show c.3900+409_3900+423delAAAGAAAGAAAGAAA		LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	35/37						chr2	TogoVar
LRPPRC_chr2_43881224_44000989	43909611	TTAATAAT others(8): Show TTAATAATAATAATAA	T T	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA18522.hp2 HG03139.hp2 NA18522.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0008 a0001c0003t0002 a0001c0003t0008	a0001c0003t0002g0085 a0001c0003t0008g0086 a0001c0003t0002g0085 a0001c0003t0008g0086	2	358	0.0056	-15	c.327 others(34): Show c.3275+2806_3275+2820delTTATTATTATTATTA		LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	30/37						chr2	TogoVar
LRR1_chr14_49593940_49619672	49608406	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0001 a0005c0009t0001	a0005c0009t0001g0075 a0005c0009t0001g0075	1	312	0.0032	-15	c.100 others(32): Show c.1004+312_1004+326delTTTTTTTTTTTTTTT		LRR1	ENSG00000165501.17	transcript	ENST00000298288.11	protein_coding	3/3					INFO_REALIGN_3_PRIME	chr14	TogoVar
LRR1_chr14_49593940_49619672	49608899	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	312	0.0032	-15	c.100 others(32): Show c.1004+791_1004+805delTTTTTTTTTTTTTTT		LRR1	ENSG00000165501.17	transcript	ENST00000298288.11	protein_coding	3/3					INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC14B_chr5_186495_201334	196691	CCCCAGGG others(8): Show CCCCAGGGGCCCCCAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00639.hp1 HG00642.hp1 others(48): Show HG00609.hp2 HG00639.hp1 HG00642.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01192.hp2 HG01496.hp1 HG01496.hp2 HG01978.hp2 HG01981.hp1 HG02083.hp1 HG02129.hp1 HG02258.hp1 HG02273.hp1 HG02293.hp1 HG02683.hp1 HG02735.hp1 HG02735.hp2 HG02970.hp1 HG03491.hp2 HG03654.hp2 HG03704.hp1 HG03831.hp2 HG03927.hp1 HG03942.hp1 NA18612.hp1 NA18940.hp2 NA18943.hp1 NA18945.hp2 NA18953.hp1 NA18961.hp1 NA18966.hp1 NA18968.hp1 NA18972.hp1 NA18981.hp1 NA18984.hp1 NA18986.hp2 NA18992.hp2 NA18994.hp2 NA18998.hp1 NA19000.hp2 NA19007.hp1 NA19007.hp2 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19082.hp1 NA19084.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0025 a0001c0001t0037 a0001c0001t0038 a0002c0004t0007	a0001c0001t0001g0001 a0001c0001t0003g0008 a0001c0001t0003g0021 others(6): Show a0001c0001t0001g0001 a0001c0001t0003g0008 a0001c0001t0003g0021 a0001c0001t0004g0001 a0001c0001t0007g0001 a0001c0001t0025g0001 a0001c0001t0037g0001 a0001c0001t0038g0001 a0002c0004t0007g0001	51	470	0.1085	-15	c.13 others(26): Show c.1339_*1353delCCCAGGGGCCCCCAT		LRRC14B	ENSG00000185028.4	transcript	ENST00000328278.4	protein_coding					358		chr5	TogoVar
LRRC15_chr3_194350249_194374743	194356676	GGCTGGAG others(8): Show GGCTGGAGAGGAAGGT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0010 a0010	a0010c0018 a0010c0018	a0010c0018t0022 a0010c0018t0022	a0010c0018t0022g0090 a0010c0018t0022g0090	1	358	0.0028	-15	c.26 others(26): Show c.2607_*2621delACCTTCCTCTCCAGC		LRRC15	ENSG00000172061.9	transcript	ENST00000347624.4	protein_coding	2/2				2607		chr3	TogoVar
LRRC17_chr7_102908000_102950111	102908192	TTAAAGGA others(8): Show TTAAAGGACTCTGATG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0207 a0002c0002t0001g0207	1	398	0.0025	-15	c.-50 others(26): Show c.-5093_-5079delTAAAGGACTCTGATG		LRRC17	ENSG00000128606.13	transcript	ENST00000339431.9	protein_coding					4807		chr7	TogoVar
LRRC1_chr6_53790005_53929125	53900020	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02647.hp2 HG02818.hp2 others(4): Show HG02451.hp2 HG02647.hp2 HG02818.hp2 HG02886.hp1 HG03471.hp2 NA20300.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0238 a0001c0001t0001g0239 others(4): Show a0001c0001t0001g0164 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243	7	370	0.0189	-15	c.787 others(30): Show c.787+148_787+162delTTTTTTTTTTTTTTT		LRRC1	ENSG00000137269.15	transcript	ENST00000370888.6	protein_coding	8/13					INFO_REALIGN_3_PRIME	chr6	TogoVar
LRRC27_chr10_132327193_132386508	132373120	AACACTCA others(8): Show AACACTCAGGTAACCC	A A	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0007 a0003c0008t0007	a0003c0008t0007g0084 a0003c0008t0007g0084	1	290	0.0035	-15	c.141 others(34): Show c.1417-1944_1417-1930delCACTCAGGTAACCCA		LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	10/10					INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC28_chr15_99246481_99395729	99288371	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp2 HG00558.hp1 others(72): Show HG00423.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00741.hp2 HG01081.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01515.hp2 HG01517.hp2 HG01981.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp2 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02155.hp1 HG02523.hp1 HG02602.hp1 HG02809.hp2 HG03017.hp1 HG03041.hp1 HG03239.hp2 HG03540.hp2 HG03710.hp2 HG03834.hp2 HG04204.hp2 HG04228.hp2 NA18747.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp1 NA18944.hp2 NA18947.hp2 NA18954.hp1 NA18955.hp2 NA18956.hp1 NA18961.hp1 NA18962.hp2 NA18963.hp1 NA18973.hp2 NA18974.hp2 NA18978.hp1 NA18979.hp1 NA18983.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp2 NA18993.hp1 NA19001.hp1 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp2 NA19055.hp2 NA19056.hp2 NA19057.hp2 NA19060.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19070.hp2 NA19075.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19081.hp2 NA19084.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(46): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0029 a0001c0001t0036 a0001c0001t0039 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0074 a0001c0001t0080 a0001c0001t0087 a0001c0001t0100 a0001c0001t0103 a0001c0001t0104 a0001c0001t0112 a0001c0001t0117 a0001c0001t0121 a0001c0001t0122 a0001c0001t0125 a0001c0001t0133 a0001c0001t0134 a0001c0001t0136 a0001c0001t0137 a0001c0001t0138 a0001c0001t0139 a0001c0001t0141 a0001c0001t0144 a0001c0001t0145 a0001c0001t0146 a0001c0001t0149 a0001c0001t0151 a0001c0001t0169 a0001c0001t0172 a0001c0001t0187 a0001c0001t0188 a0001c0001t0198 a0001c0001t0203 a0001c0001t0205 a0001c0001t0213 a0001c0001t0220	a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0261 others(70): Show a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0261 a0001c0001t0001g0268 a0001c0001t0002g0033 a0001c0001t0002g0224 a0001c0001t0002g0228 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0249 a0001c0001t0002g0251 a0001c0001t0002g0256 a0001c0001t0004g0004 a0001c0001t0004g0223 a0001c0001t0004g0233 a0001c0001t0004g0240 a0001c0001t0004g0243 a0001c0001t0010g0226 a0001c0001t0010g0227 a0001c0001t0012g0222 a0001c0001t0014g0072 a0001c0001t0022g0281 a0001c0001t0022g0282 a0001c0001t0023g0215 a0001c0001t0023g0217 a0001c0001t0024g0005 a0001c0001t0026g0003 a0001c0001t0027g0247 a0001c0001t0027g0250 a0001c0001t0029g0220 a0001c0001t0029g0221 a0001c0001t0036g0255 a0001c0001t0036g0258 a0001c0001t0039g0253 a0001c0001t0039g0254 a0001c0001t0041g0232 a0001c0001t0041g0242 a0001c0001t0042g0219 a0001c0001t0044g0236 a0001c0001t0074g0264 a0001c0001t0080g0214 a0001c0001t0087g0267 a0001c0001t0100g0004 a0001c0001t0103g0241 a0001c0001t0104g0230 a0001c0001t0112g0216 a0001c0001t0117g0270 a0001c0001t0121g0234 a0001c0001t0122g0231 a0001c0001t0125g0229 a0001c0001t0133g0259 a0001c0001t0134g0263 a0001c0001t0136g0235 a0001c0001t0137g0252 a0001c0001t0138g0034 a0001c0001t0139g0257 a0001c0001t0141g0237 a0001c0001t0144g0248 a0001c0001t0145g0213 a0001c0001t0146g0071 a0001c0001t0149g0269 a0001c0001t0151g0266 a0001c0001t0169g0283 a0001c0001t0172g0262 a0001c0001t0187g0212 a0001c0001t0188g0218 a0001c0001t0198g0225 a0001c0001t0203g0260 a0001c0001t0205g0244 a0001c0001t0213g0211 a0001c0001t0220g0265	75	332	0.2259	-15	c.385 others(30): Show c.385+435_385+449delTTTTTTTTTTTTTTT		LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	5/9					INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC36_chr16_67321815_67390204	67338865	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02818.hp1 HG02970.hp1 others(9): Show HG02572.hp1 HG02818.hp1 HG02970.hp1 HG03098.hp2 HG03130.hp1 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03579.hp2 HG04199.hp2 NA18522.hp1 NA19079.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0006 a0003c0003 a0001c0001 a0002c0006 a0003c0003	a0001c0001t0001 a0002c0006t0001 a0003c0003t0001 a0001c0001t0001 a0002c0006t0001 a0003c0003t0001	a0001c0001t0001g0071 a0001c0001t0001g0181 a0002c0006t0001g0036 others(9): Show a0001c0001t0001g0071 a0001c0001t0001g0181 a0002c0006t0001g0036 a0003c0003t0001g0008 a0003c0003t0001g0014 a0003c0003t0001g0015 a0003c0003t0001g0016 a0003c0003t0001g0018 a0003c0003t0001g0024 a0003c0003t0001g0025 a0003c0003t0001g0026 a0003c0003t0001g0027	12	194	0.0619	-15	c.71- others(30): Show c.71-3060_71-3046delTTTTTTTTTTTTTTT		LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding	1/13					INFO_REALIGN_3_PRIME	chr16	TogoVar
LRRC36_chr16_67321815_67390204	67389026	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp1 HG01070.hp1 HG01071.hp1 others(55): Show HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01109.hp2 HG01361.hp1 HG01884.hp2 HG02109.hp2 HG02145.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03927.hp1 HG04199.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0002c0004 a0002c0006 others(1): Show a0002c0002 a0002c0004 a0002c0006 a0003c0003	a0002c0002t0002 a0002c0004t0002 a0002c0006t0001 others(1): Show a0002c0002t0002 a0002c0004t0002 a0002c0006t0001 a0003c0003t0001	a0002c0002t0002g0039 a0002c0002t0002g0040 a0002c0002t0002g0041 others(55): Show a0002c0002t0002g0039 a0002c0002t0002g0040 a0002c0002t0002g0041 a0002c0002t0002g0042 a0002c0002t0002g0043 a0002c0002t0002g0044 a0002c0002t0002g0045 a0002c0002t0002g0046 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0049 a0002c0002t0002g0050 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0055 a0002c0002t0002g0182 a0002c0002t0002g0183 a0002c0002t0002g0184 a0002c0002t0002g0185 a0002c0002t0002g0186 a0002c0002t0002g0187 a0002c0002t0002g0188 a0002c0002t0002g0189 a0002c0002t0002g0190 a0002c0002t0002g0191 a0002c0002t0002g0192 a0002c0002t0002g0193 a0002c0004t0002g0030 a0002c0004t0002g0031 a0002c0004t0002g0032 a0002c0006t0001g0036 a0003c0003t0001g0008 a0003c0003t0001g0009 a0003c0003t0001g0010 a0003c0003t0001g0011 a0003c0003t0001g0012 a0003c0003t0001g0013 a0003c0003t0001g0014 a0003c0003t0001g0015 a0003c0003t0001g0016 a0003c0003t0001g0017 a0003c0003t0001g0018 a0003c0003t0001g0019 a0003c0003t0001g0020 a0003c0003t0001g0021 a0003c0003t0001g0022 a0003c0003t0001g0023 a0003c0003t0001g0024 a0003c0003t0001g0025 a0003c0003t0001g0026 a0003c0003t0001g0027 a0003c0003t0001g0028 a0003c0003t0001g0029 a0003c0003t0001g0033 a0003c0003t0001g0034 a0003c0003t0001g0035	58	194	0.2990	-15	c.39 others(26): Show c.3938_*3952delTTTTTTTTTTTTTTT		LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding					3823		chr16	TogoVar
LRRC38_chr1_13469973_13519003	13504759	GAGGGGAA others(8): Show GAGGGGAAGGGAGGGA	G G	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0253 a0001c0001t0001g0253	1	448	0.0022	-15	c.631 others(32): Show c.631+8189_631+8203delTCCCTCCCTTCCCCT		LRRC38	ENSG00000162494.6	transcript	ENST00000376085.4	protein_coding	1/1						chr1	TogoVar
LRRC39_chr1_100143448_100183256	100167778	AAATAATA others(8): Show AAATAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02717.hp1 HG02559.hp2 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0068 a0001c0001t0003g0047 a0001c0001t0001g0068 a0001c0001t0003g0047	2	288	0.0069	-15	c.113 others(30): Show c.113+611_113+625delATTATTATTATTATT		LRRC39	ENSG00000122477.14	transcript	ENST00000370137.6	protein_coding	3/9						chr1	TogoVar
LRRC3B_chr3_26617772_26715776	26684938	CTTTATTT others(8): Show CTTTATTTTATTTTAT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01109.hp1 HG01891.hp1 others(26): Show HG00639.hp2 HG01109.hp1 HG01891.hp1 HG01891.hp2 HG02109.hp2 HG02257.hp1 HG02451.hp1 HG02486.hp2 HG02559.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02717.hp1 HG02723.hp1 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG03195.hp1 HG03225.hp1 HG03540.hp1 HG03579.hp2 HG06807.hp2 NA18522.hp1 NA19240.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0002t0001	a0001c0001t0001g0039 a0001c0001t0001g0097 a0001c0001t0001g0105 others(26): Show a0001c0001t0001g0039 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0001g0134 a0001c0001t0001g0238 a0001c0001t0001g0308 a0001c0001t0002g0021 a0001c0001t0002g0048 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0135 a0001c0001t0002g0244 a0001c0001t0002g0290 a0001c0001t0002g0295 a0001c0001t0002g0332 a0001c0001t0002g0336 a0001c0001t0002g0337 a0001c0001t0002g0338 a0001c0001t0002g0360 a0001c0001t0002g0361 a0001c0001t0004g0347 a0001c0001t0004g0349 a0001c0001t0004g0350 a0001c0001t0004g0352 a0001c0001t0004g0354 a0001c0001t0004g0355 a0001c0001t0004g0359 a0001c0002t0001g0339	29	370	0.0784	-15	c.-16 others(36): Show c.-160-24555_-160-24541delTTTTATTTTATTTTA		LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC40_chr1_70139805_70210579	70187838	GGAAGAGA others(8): Show GGAAGAGAAGAGAAGA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01261.hp2 HG01358.hp1 others(10): Show HG00280.hp1 HG01261.hp2 HG01358.hp1 HG02056.hp1 HG02602.hp2 HG03669.hp2 HG03834.hp1 NA18522.hp2 NA18941.hp1 NA18951.hp2 NA19043.hp1 NA19057.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0062 others(10): Show a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0076 a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0109 a0001c0001t0001g0115 a0001c0001t0001g0123 a0001c0001t0001g0176 a0001c0001t0001g0258	13	320	0.0406	-15	c.334 others(30): Show c.334-515_334-501delTCTTCTCTTCTCTTC		LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	2/14						chr1	TogoVar
LRRC40_chr1_70139805_70210579	70209740	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18948.hp2 NA18948.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0043	1	320	0.0031	-15	c.-42 others(26): Show c.-4215_-4201delAAAAAAAAAAAAAAA		LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding					4162		chr1	TogoVar
LRRC47_chr1_3773559_3801498	3799550	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp2 HG02615.hp2 HG02809.hp1 others(1): Show HG02559.hp2 HG02615.hp2 HG02809.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0012 a0001c0001t0004 a0001c0001t0012	a0001c0001t0004g0192 a0001c0001t0004g0193 a0001c0001t0012g0140 others(1): Show a0001c0001t0004g0192 a0001c0001t0004g0193 a0001c0001t0012g0140 a0001c0001t0012g0141	4	412	0.0097	-15	c.-30 others(26): Show c.-3089_-3075delTTTTTTTTTTTTTTT		LRRC47	ENSG00000130764.10	transcript	ENST00000378251.3	protein_coding					3053		chr1	TogoVar
LRRC49_chr15_70887826_71058658	71058450	CTTTCTTT others(8): Show CTTTCTTTTCTTTCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG01256.hp1 HG01978.hp1 others(2): Show HG01255.hp1 HG01256.hp1 HG01978.hp1 HG02083.hp1 HG02132.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0009 a0002c0002 a0005c0009	a0002c0002t0001 a0002c0002t0022 a0005c0009t0001 a0002c0002t0001 a0002c0002t0022 a0005c0009t0001	a0002c0002t0001g0036 a0002c0002t0001g0051 a0002c0002t0001g0162 others(2): Show a0002c0002t0001g0036 a0002c0002t0001g0051 a0002c0002t0001g0162 a0002c0002t0022g0174 a0005c0009t0001g0030	5	262	0.0191	-15	c.88 others(26): Show c.8839_*8853delTTTCTTTTCTTTCTT		LRRC49	ENSG00000137821.12	transcript	ENST00000260382.10	protein_coding					4793		chr15	TogoVar
LRRC4B_chr19_50511892_50573435	50520236	AAAAAAAA others(8): Show AAAAAAAAAAAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0065 a0001c0003t0001g0065	1	360	0.0028	-15	c.298 others(30): Show c.298-836_298-822delCTTCTTTTTTTTTTT		LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2						chr19	TogoVar
LRRC4B_chr19_50511892_50573435	50538559	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01243.hp1 HG01346.hp2 others(23): Show HG00735.hp1 HG01243.hp1 HG01346.hp2 HG02055.hp2 HG02257.hp1 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp2 HG02717.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03209.hp2 HG03225.hp2 HG03516.hp1 HG03540.hp1 NA18522.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0002c0002 a0005c0007	a0001c0001t0001 a0001c0003t0001 a0001c0005t0001 others(2): Show a0001c0001t0001 a0001c0003t0001 a0001c0005t0001 a0002c0002t0001 a0005c0007t0001	a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0068 others(23): Show a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0084 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0099 a0001c0001t0001g0136 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0278 a0001c0001t0001g0311 a0001c0003t0001g0052 a0001c0003t0001g0053 a0001c0003t0001g0061 a0001c0003t0001g0065 a0001c0003t0001g0067 a0001c0003t0001g0071 a0001c0003t0001g0101 a0001c0005t0001g0286 a0002c0002t0001g0069 a0002c0002t0001g0070 a0005c0007t0001g0325	26	360	0.0722	-15	c.297 others(32): Show c.297+9968_297+9982delAAAAAAAAAAAAAAA		LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2						chr19	TogoVar
LRRC4C_chr11_40109209_41464652	40117146	CCAGAGAA others(8): Show CCAGAGAATATGATCT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02809.hp2 HG03453.hp1 others(2): Show HG02572.hp1 HG02809.hp2 HG03453.hp1 HG03579.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 a0001c0001t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0001g0002 a0001c0001t0001g0014 a0001c0001t0001g0047 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0014 a0001c0001t0001g0047 a0001c0001t0002g0026 a0002c0003t0001g0017	5	48	0.1042	-15	c.-42 others(30): Show c.-42-827_-42-813delAGATCATATTCTCTG		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	6/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40355962	TAGTATAG others(8): Show TAGTATAGTATAGTAC	T T	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01074.hp2 HG01261.hp1 others(2): Show HG01074.hp1 HG01074.hp2 HG01261.hp1 HG02055.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002	a0001c0001t0002g0032 a0001c0001t0002g0036 a0001c0002t0001g0029 others(2): Show a0001c0001t0002g0032 a0001c0001t0002g0036 a0001c0002t0001g0029 a0001c0002t0002g0008 a0001c0002t0002g0012	5	48	0.1042	-15	c.-26 others(36): Show c.-269-36256_-269-36242delGTACTATACTATACT		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40382123	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01074.hp2 HG01261.hp1 others(10): Show HG01074.hp1 HG01074.hp2 HG01261.hp1 HG02572.hp2 HG02622.hp2 HG02698.hp2 HG02809.hp1 HG02970.hp2 HG03098.hp1 HG03139.hp2 NA18989.hp1 NA20129.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0031 others(10): Show a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0031 a0001c0001t0001g0042 a0001c0001t0002g0009 a0001c0001t0002g0032 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0002t0001g0018 a0001c0002t0001g0024 a0001c0002t0001g0029 a0001c0002t0001g0045 a0001c0002t0002g0012	13	48	0.2708	-15	c.-26 others(36): Show c.-269-62417_-269-62403delAAAAAAAAAAAAAAA		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40724070	AAATATAT others(8): Show AAATATATACACAACC	A A	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG03540.hp1 HG02970.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0025 a0001c0001t0001g0005 a0001c0001t0001g0025	2	48	0.0417	-15	c.-40 others(36): Show c.-406-75807_-406-75793delGGTTGTGTATATATT		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40860777	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0043 a0001c0001t0002g0043	1	48	0.0208	-15	c.-40 others(36): Show c.-407+72843_-407+72857delAAAAAAAAAAAAAAA		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41123256	GTTTTGTT others(8): Show GTTTTGTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	48	0.0208	-15	c.-49 others(38): Show c.-495-189548_-495-189534delAAAAAAAAAACAAAA		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41150787	TAAATAAA others(8): Show TAAATAAAATAAAATA	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	48	0.0208	-15	c.-49 others(38): Show c.-495-217079_-495-217065delTATTTTATTTTATTT		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41176967	TAAAACAA others(8): Show TAAAACAAAACAAAAC	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02280.hp2 HG02970.hp1 others(2): Show HG01261.hp2 HG02280.hp2 HG02970.hp1 HG03098.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 others(2): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0039 a0001c0002t0001g0030	5	48	0.1042	-15	c.-49 others(38): Show c.-495-243259_-495-243245delGTTTTGTTTTGTTTT		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6						chr11	TogoVar
LRRC53_chr1_74464376_74517611	74500603	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02717.hp1 HG03654.hp1 others(10): Show HG01261.hp1 HG02717.hp1 HG03654.hp1 NA18945.hp2 NA18952.hp2 NA18953.hp2 NA18956.hp2 NA18960.hp1 NA18968.hp1 NA19007.hp2 NA19043.hp1 NA19057.hp1 NA19079.hp2	a0003 a0008 a0009 a0003 a0008 a0009	a0003c0004 a0003c0005 a0008c0008 others(1): Show a0003c0004 a0003c0005 a0008c0008 a0009c0010	a0003c0004t0001 a0003c0005t0001 a0008c0008t0001 others(1): Show a0003c0004t0001 a0003c0005t0001 a0008c0008t0001 a0009c0010t0003	a0003c0004t0001g0036 a0003c0004t0001g0037 a0003c0004t0001g0214 others(9): Show a0003c0004t0001g0036 a0003c0004t0001g0037 a0003c0004t0001g0214 a0003c0004t0001g0216 a0003c0004t0001g0220 a0003c0004t0001g0259 a0003c0005t0001g0038 a0003c0005t0001g0067 a0003c0005t0001g0249 a0008c0008t0001g0013 a0008c0008t0001g0234 a0009c0010t0003g0033	13	342	0.0380	-15	c.-27 others(34): Show c.-27+11908_-27+11922delTTTTTTTTTTTTTTT		LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4						chr1	TogoVar
LRRC55_chr11_57176953_57196717	57179004	ATCCTCAT others(8): Show ATCCTCATCTGAAGTC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0014 a0001c0001t0008g0014	1	432	0.0023	-15	c.-30 others(26): Show c.-3018_-3004delTCCTCATCTGAAGTC		LRRC55	ENSG00000183908.7	transcript	ENST00000497933.3	protein_coding					2948		chr11	TogoVar
LRRC55_chr11_57176953_57196717	57185270	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0031 a0001c0011t0031	a0001c0011t0031g0059 a0001c0011t0031g0059	1	432	0.0023	-15	c.662 others(32): Show c.662-1961_662-1947delTTTTTTTTTTTTTTT		LRRC55	ENSG00000183908.7	transcript	ENST00000497933.3	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr11	TogoVar
LRRC59_chr17_50376238_50402523	50402285	CTCTGCCT others(8): Show CTCTGCCTCCTGGGTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	360	0.0028	-15	c.-49 others(26): Show c.-4983_-4969delAACCCAGGAGGCAGA		LRRC59	ENSG00000108829.10	transcript	ENST00000225972.8	protein_coding					4763		chr17	TogoVar
LRRC66_chr4_51988652_52025363	51994622	CTCAGATC others(8): Show CTCAGATCTATCAGTG	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG03710.hp2 HG03710.hp2	a0010 a0010	a0010c0012 a0010c0012	a0010c0012t0002 a0010c0012t0002	a0010c0012t0002g0051 a0010c0012t0002g0051	1	336	0.0030	-15	c.238 others(24): Show c.2385_2399delCACTGATAGATCTGA	p.Asp others(13): Show p.Asp795_Ser799del	LRRC66	ENSG00000188993.4	transcript	ENST00000682860.1	protein_coding	5/5	2464/3435	2385/2643	795/880			chr4	TogoVar

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