Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CD200_chr3_112328156_112367812	112332243	GAGGAGGA others(8): Show GAGGAGGAGAAGGAGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0251 a0002c0003t0001g0251	1	406	0.0025	-15	c.-96 others(24): Show c.-969_-955delAGGAGGAGAAGGAGA	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding		912		chr3	TogoVar
CD200_chr3_112328156_112367812	112342313	CTTTCTTT others(8): Show CTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01981.hp1 HG02896.hp1 others(2): Show HG00735.hp2 HG01981.hp1 HG02896.hp1 HG03130.hp1 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0058 a0001c0001t0001g0126 others(2): Show a0001c0001t0001g0047 a0001c0001t0001g0058 a0001c0001t0001g0126 a0001c0001t0001g0219 a0001c0001t0001g0223	5	176	0.0284	-15	c.94+ others(30): Show c.94+1331_94+1345delTTTCTTTCTTTCTTT	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding	2/5			chr3	TogoVar
CD200_chr3_112328156_112367812	112342325	CTTTCTTT others(8): Show CTTTCTTTCTTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02074.hp1 HG02572.hp1 others(7): Show HG01433.hp1 HG02074.hp1 HG02572.hp1 HG02622.hp1 HG02698.hp2 HG02970.hp1 HG03486.hp1 HG03669.hp1 NA18968.hp2 NA19240.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0003c0005	a0001c0001t0024 a0001c0002t0001 a0001c0002t0004 others(4): Show a0001c0001t0024 a0001c0002t0001 a0001c0002t0004 a0002c0003t0001 a0002c0003t0002 a0002c0003t0005 a0003c0005t0003	a0001c0001t0024g0148 a0001c0002t0001g0115 a0001c0002t0004g0116 others(7): Show a0001c0001t0024g0148 a0001c0002t0001g0115 a0001c0002t0004g0116 a0002c0003t0001g0009 a0002c0003t0001g0049 a0002c0003t0001g0253 a0002c0003t0001g0288 a0002c0003t0002g0246 a0002c0003t0005g0280 a0003c0005t0003g0134	10	397	0.0252	-15	c.94+ others(30): Show c.94+1343_94+1357delTTTCTTTCTTTCCTT	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding	2/5			chr3	TogoVar
CD200_chr3_112328156_112367812	112342341	CTTTCTTT others(8): Show CTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01943.hp1 NA19082.hp2 HG01346.hp2 HG01943.hp1 NA19082.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0240 a0002c0003t0001g0264 a0002c0003t0001g0265 a0002c0003t0001g0240 a0002c0003t0001g0264 a0002c0003t0001g0265	3	381	0.0079	-15	c.94+ others(30): Show c.94+1359_94+1373delTTTCTTTCTTTCTTT	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding	2/5			chr3	TogoVar
CD200_chr3_112328156_112367812	112342414	TTTCTTTC others(8): Show TTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00733.hp1 NA19000.hp2 HG00597.hp2 HG00733.hp1 NA19000.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0023 a0002c0003t0001g0052 a0002c0003t0001g0284 a0002c0003t0001g0023 a0002c0003t0001g0052 a0002c0003t0001g0284	3	406	0.0074	-15	c.94+ others(30): Show c.94+1436_94+1450delTTCTTTCTTTCTTCT	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
CD200_chr3_112328156_112367812	112352863	TATAATGC others(8): Show TATAATGCCAGAGAGC	T T	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0113 a0001c0002t0001g0113	1	406	0.0025	-15	c.802 others(32): Show c.802+3047_802+3061delAATGCCAGAGAGCAT	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
CD244_chr1_160825160_160867887	160828889	AAAGAAAG others(8): Show AAAGAAAGAAAGAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0009 a0009	a0009c0016 a0009c0016	a0009c0016t0012 a0009c0016t0012	a0009c0016t0012g0063 a0009c0016t0012g0063	1	402	0.0025	-15	c.24 others(26): Show c.2443_*2457delCTTTCTTTCTTTCTT	CD244	ENSG00000122223.13	transcript	ENST00000368034.9	protein_coding		1270		chr1	TogoVar
CD276_chr15_73679383_73719514	73718253	TATATATA others(8): Show TATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18952.hp1 NA18998.hp2 NA18952.hp1 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0007 a0001c0001t0002g0016 a0001c0001t0002g0007 a0001c0001t0002g0016	2	377	0.0053	-15	c.52 others(26): Show c.5298_*5312delATATATATATATATA	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3740		chr15	TogoVar
CD276_chr15_73679383_73719514	73718255	TATATATA others(8): Show TATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp1 NA18963.hp2 NA18968.hp1 others(2): Show NA18963.hp1 NA18963.hp2 NA18968.hp1 NA18969.hp1 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0036 a0001c0001t0002g0002 a0001c0001t0002g0016 others(2): Show a0001c0001t0001g0036 a0001c0001t0002g0002 a0001c0001t0002g0016 a0001c0001t0002g0019 a0001c0001t0002g0270	5	371	0.0135	-15	c.53 others(26): Show c.5300_*5314delATATATATATATATA	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3742		chr15	TogoVar
CD276_chr15_73679383_73719514	73718257	TATATATA others(8): Show TATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01257.hp2 HG04184.hp2 NA18945.hp2 others(1): Show HG01257.hp2 HG04184.hp2 NA18945.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0001c0001t0001 a0001c0001t0002 a0001c0005t0001	a0001c0001t0001g0117 a0001c0001t0002g0208 a0001c0001t0002g0241 others(1): Show a0001c0001t0001g0117 a0001c0001t0002g0208 a0001c0001t0002g0241 a0001c0005t0001g0008	4	376	0.0106	-15	c.53 others(26): Show c.5302_*5316delATATATATATATATA	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3744		chr15	TogoVar
CD276_chr15_73679383_73719514	73718259	TATATATA others(8): Show TATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19081.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0274 a0001c0001t0002g0274	1	377	0.0027	-15	c.53 others(26): Show c.5304_*5318delATATATATATATATA	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3746		chr15	TogoVar
CD276_chr15_73679383_73719514	73718260	ATATATAT others(8): Show ATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0128 a0002c0002t0004g0128	1	371	0.0027	-15	c.53 others(26): Show c.5305_*5319delTATATATATATATAT	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3747		chr15	TogoVar
CD276_chr15_73679383_73719514	73718265	TATATATA others(8): Show TATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18975.hp1 NA19090.hp2 NA18975.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0005t0001 a0001c0001t0002 a0001c0005t0001	a0001c0001t0002g0019 a0001c0005t0001g0084 a0001c0001t0002g0019 a0001c0005t0001g0084	2	377	0.0053	-15	c.53 others(26): Show c.5310_*5324delATATATATATATATA	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3752		chr15	TogoVar
CD276_chr15_73679383_73719514	73718266	ATATATAT others(8): Show ATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	366	0.0027	-15	c.53 others(26): Show c.5311_*5325delTATATATATATATAT	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3753		chr15	TogoVar
CD300LD_chr17_74574365_74597283	74580649	ACCATCAA others(8): Show ACCATCAATTCCACCC	A A	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02896.hp1 HG02897.hp2 HG02622.hp2 HG02896.hp1 HG02897.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0033 a0003c0004t0001g0063 a0003c0004t0001g0033 a0003c0004t0001g0063	3	438	0.0068	-15	c.474 others(30): Show c.474-551_474-537delGGGTGGAATTGATGG	CD300LD	ENSG00000204345.1	transcript	ENST00000375352.1	protein_coding	3/3			chr17	TogoVar
CD300LD_chr17_74574365_74597283	74595393	GTTGTTTT others(8): Show GTTGTTTTGTTTTGTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00639.hp1 others(16): Show HG00423.hp1 HG00438.hp2 HG00639.hp1 HG02622.hp1 HG02683.hp1 HG02809.hp2 HG02976.hp2 HG03834.hp2 NA18959.hp2 NA18960.hp1 NA18962.hp2 NA18965.hp1 NA18973.hp1 NA18986.hp1 NA18994.hp1 NA19007.hp1 NA19065.hp1 NA19074.hp1 NA19075.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0003 a0003c0003t0001 a0003c0003t0002 others(1): Show a0002c0002t0003 a0003c0003t0001 a0003c0003t0002 a0003c0003t0009	a0002c0002t0003g0009 a0002c0002t0003g0029 a0002c0002t0003g0052 others(9): Show a0002c0002t0003g0009 a0002c0002t0003g0029 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0003c0003t0001g0030 a0003c0003t0001g0039 a0003c0003t0001g0057 a0003c0003t0001g0058 a0003c0003t0001g0084 a0003c0003t0002g0072 a0003c0003t0009g0162	19	191	0.0995	-15	c.-32 others(26): Show c.-3206_-3192delAACAAAACAAAACAA	CD300LD	ENSG00000204345.1	transcript	ENST00000375352.1	protein_coding		3111		chr17	TogoVar
CD300LF_chr17_74689317_74717923	74696903	TGTTTGGT others(8): Show TGTTTGGTTTGGTTTG	T T	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG06807.hp2 NA19030.hp2 HG02738.hp2 HG06807.hp2 NA19030.hp2	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0005c0005 a0006c0006 a0001c0001 a0005c0005 a0006c0006	a0001c0001t0001 a0005c0005t0003 a0006c0006t0003 a0001c0001t0001 a0005c0005t0003 a0006c0006t0003	a0001c0001t0001g0184 a0005c0005t0003g0187 a0006c0006t0003g0148 a0001c0001t0001g0184 a0005c0005t0003g0187 a0006c0006t0003g0148	3	200	0.0150	-15	c.560 others(30): Show c.560-701_560-687delCAAACCAAACCAAAC	CD300LF	ENSG00000186074.19	transcript	ENST00000326165.11	protein_coding	4/6			chr17	TogoVar
CD300LG_chr17_43842176_43868639	43867576	ACTTCTTC others(8): Show ACTTCTTCTTCTTCTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp2 HG01192.hp2 HG02698.hp2 HG01074.hp2 HG01192.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0086 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0086	3	46	0.0652	-15	c.56 others(26): Show c.5666_*5680delCTTCTTCTTCTTCTT	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		3938		chr17	TogoVar
CD302_chr2_159763628_159803208	159794269	CAATAAAA others(8): Show CAATAAAATAAAATAA	C C	intron_variant intron_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0328 a0001c0001t0004g0328	1	341	0.0029	-15	c.67+ others(30): Show c.67+3848_67+3862delTTATTTTATTTTATT	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding	1/5			chr2	TogoVar
CD37_chr19_49330406_49345606	49337041	CACCATCC others(8): Show CACCATCCCTCTCCGT	C C	intron_variant intron_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	380	0.0026	-15	c.267 others(27): Show c.267+9_267+23delACCATCCCTCTCCGT	CD37	ENSG00000104894.12	transcript	ENST00000323906.9	protein_coding	3/7			chr19	TogoVar
CD38_chr4_15773328_15858232	15802491	GTTTTATT others(8): Show GTTTTATTTTATTTTA	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00741.hp2 HG01168.hp2 others(40): Show HG00642.hp2 HG00741.hp2 HG01168.hp2 HG01255.hp2 HG01358.hp2 HG01433.hp2 HG01891.hp1 HG02015.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02965.hp1 HG03017.hp1 HG03098.hp1 HG03209.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03492.hp2 HG03669.hp1 HG03669.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18943.hp2 NA18954.hp1 NA18966.hp2 NA18968.hp1 NA19043.hp2 NA19088.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20752.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(18): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0001c0001t0019 a0001c0001t0023 a0001c0001t0026 a0001c0001t0028 a0001c0001t0033 a0001c0001t0034 a0001c0001t0038 a0001c0001t0040 a0001c0001t0043 a0001c0001t0046 a0001c0001t0048 a0001c0001t0066 a0001c0001t0071 a0001c0001t0072 a0001c0002t0029 a0001c0002t0030	a0001c0001t0002g0016 a0001c0001t0002g0032 a0001c0001t0002g0187 others(38): Show a0001c0001t0002g0016 a0001c0001t0002g0032 a0001c0001t0002g0187 a0001c0001t0002g0189 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0003g0186 a0001c0001t0004g0065 a0001c0001t0004g0070 a0001c0001t0007g0197 a0001c0001t0011g0002 a0001c0001t0011g0048 a0001c0001t0011g0049 a0001c0001t0011g0050 a0001c0001t0011g0051 a0001c0001t0019g0199 a0001c0001t0023g0052 a0001c0001t0026g0071 a0001c0001t0026g0072 a0001c0001t0028g0076 a0001c0001t0033g0182 a0001c0001t0034g0112 a0001c0001t0038g0014 a0001c0001t0040g0014 a0001c0001t0043g0109 a0001c0001t0046g0053 a0001c0001t0048g0002 a0001c0001t0066g0115 a0001c0001t0071g0180 a0001c0001t0072g0198 a0001c0002t0029g0163 a0001c0002t0029g0164 a0001c0002t0030g0073	43	100	0.4300	-15	c.234 others(34): Show c.234-13971_234-13957delTATTTTATTTTATTT	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15827336	ATGCAGAA others(8): Show ATGCAGAAAACCTGTC	A A	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0065 a0001c0001t0065	a0001c0001t0065g0104 a0001c0001t0065g0104	1	342	0.0029	-15	c.499 others(32): Show c.499+2323_499+2337delCAGAAAACCTGTCTG	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15835363	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01433.hp2 HG02559.hp2 others(2): Show HG01243.hp2 HG01433.hp2 HG02559.hp2 NA19043.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0026 a0001c0001t0065 others(1): Show a0001c0001t0009 a0001c0001t0026 a0001c0001t0065 a0001c0001t0067	a0001c0001t0009g0178 a0001c0001t0026g0071 a0001c0001t0026g0072 others(2): Show a0001c0001t0009g0178 a0001c0001t0026g0071 a0001c0001t0026g0072 a0001c0001t0065g0104 a0001c0001t0067g0075	5	35	0.1429	-15	c.585 others(32): Show c.585+1079_585+1093delTTTTTTTTTTTTTTT	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD3G_chr11_118339344_118360161	118355473	ATATATGT others(8): Show ATATATGTATATGTAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0068 a0002c0002t0002g0068	1	438	0.0023	-15	c.23 others(26): Show c.2374_*2388delTATATGTATATGTAT	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding		313		chr11	TogoVar
CD47_chr3_108038091_108096031	108044433	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00639.hp1 others(18): Show HG00099.hp1 HG00140.hp2 HG00639.hp1 HG00738.hp2 HG01074.hp1 HG01993.hp1 HG02040.hp2 HG02055.hp2 HG02280.hp1 HG02738.hp2 HG03486.hp1 HG03490.hp2 HG03492.hp2 HG03927.hp2 HG04204.hp2 NA18961.hp1 NA18977.hp2 NA19043.hp1 NA19077.hp2 NA19087.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009	a0001c0001t0004g0185 a0001c0001t0004g0252 a0001c0001t0005g0007 others(13): Show a0001c0001t0004g0185 a0001c0001t0004g0252 a0001c0001t0005g0007 a0001c0001t0005g0016 a0001c0001t0005g0024 a0001c0001t0005g0025 a0001c0001t0005g0026 a0001c0001t0005g0121 a0001c0001t0005g0126 a0001c0001t0005g0177 a0001c0001t0005g0178 a0001c0001t0005g0179 a0001c0001t0005g0180 a0001c0001t0005g0181 a0001c0001t0005g0184 a0001c0001t0009g0190	21	384	0.0547	-15	c.28 others(26): Show c.2840_*2854delGTTTTTTTTTTTTTT	CD47	ENSG00000196776.17	transcript	ENST00000361309.6	protein_coding	11/11	2840		chr3	TogoVar
CD47_chr3_108038091_108096031	108065811	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0307 a0001c0001t0027g0307	1	40	0.0250	-15	c.491 others(32): Show c.491-4974_491-4960delTTTTTTTTTTTTTTT	CD47	ENSG00000196776.17	transcript	ENST00000361309.6	protein_coding	3/10			chr3	TogoVar
CD4_chr12_6784528_6825799	6793637	GTATCTAT others(8): Show GTATCTATCTATCATC	G G	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0051	1	440	0.0023	-15	c.-68 others(32): Show c.-68+3988_-68+4002delATCTATCTATCTATC	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
CD4_chr12_6784528_6825799	6793689	TATCTATC others(8): Show TATCTATCTATCTATC	T T	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0006 a0001c0004t0006	a0001c0004t0006g0064 a0001c0004t0006g0064	1	429	0.0023	-15	c.-68 others(32): Show c.-68+4028_-68+4042delATCTATCTATCTATC	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding	1/9			chr12	TogoVar
CD55_chr1_207316678_207365966	207363306	AGCATTTC others(8): Show AGCATTTCTGGGTCTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG03041.hp2 HG03195.hp1 others(2): Show HG02145.hp1 HG03041.hp2 HG03195.hp1 NA19030.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0004g0025 others(1): Show a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0004g0025 a0001c0001t0004g0051	5	354	0.0141	-15	c.36 others(26): Show c.3697_*3711delGCATTTCTGGGTCTG	CD55	ENSG00000196352.18	transcript	ENST00000367064.9	protein_coding		2341		chr1	TogoVar
CD5L_chr1_157825911_157846808	157846150	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02109.hp1 HG02602.hp2 others(13): Show HG02055.hp1 HG02109.hp1 HG02602.hp2 HG02622.hp2 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG03139.hp1 HG03209.hp2 HG03540.hp2 HG03579.hp1 NA18522.hp1 NA18906.hp1 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 a0004c0004t0001	a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0004g0081 others(7): Show a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0004g0081 a0002c0002t0001g0012 a0002c0002t0001g0039 a0002c0002t0001g0087 a0002c0002t0001g0094 a0002c0002t0001g0108 a0004c0004t0001g0095 a0004c0004t0001g0096	16	100	0.1600	-15	c.-44 others(26): Show c.-4464_-4450delAAAAAAAAAAAAAAA	CD5L	ENSG00000073754.6	transcript	ENST00000368174.5	protein_coding		4343		chr1	TogoVar
CD70_chr19_6580839_6596150	6586774	TTGGTCAC others(8): Show TTGGTCACAGAAACCC	T T	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0095 a0001c0001t0002g0095	1	454	0.0022	-15	c.197 others(30): Show c.197-384_197-370delGGGTTTCTGTGACCA	CD70	ENSG00000125726.11	transcript	ENST00000245903.4	protein_coding	2/2			chr19	TogoVar
CD82_chr11_44560663_44625358	44562074	TTTTTGTT others(8): Show TTTTTGTTTTGTTTTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG02559.hp2 HG02622.hp2 others(7): Show HG00639.hp2 HG02559.hp2 HG02622.hp2 HG02717.hp1 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03516.hp1 NA19030.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0001c0012 others(6): Show a0001c0001 a0001c0006 a0001c0012 a0001c0018 a0002c0003 a0002c0007 a0002c0015 a0002c0019 a0002c0025	a0001c0001t0012 a0001c0001t0049 a0001c0006t0003 others(7): Show a0001c0001t0012 a0001c0001t0049 a0001c0006t0003 a0001c0012t0003 a0001c0018t0012 a0002c0003t0004 a0002c0007t0004 a0002c0015t0003 a0002c0019t0011 a0002c0025t0004	a0001c0001t0012g0341 a0001c0001t0049g0342 a0001c0006t0003g0343 others(7): Show a0001c0001t0012g0341 a0001c0001t0049g0342 a0001c0006t0003g0343 a0001c0012t0003g0339 a0001c0018t0012g0340 a0002c0003t0004g0345 a0002c0007t0004g0346 a0002c0015t0003g0338 a0002c0019t0011g0344 a0002c0025t0004g0348	10	201	0.0498	-15	c.-37 others(26): Show c.-3764_-3750delTTTTGTTTTGTTTTG	CD82	ENSG00000085117.12	transcript	ENST00000227155.9	protein_coding		3588		chr11	TogoVar
CD82_chr11_44560663_44625358	44598400	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0007 a0002c0003t0007	a0002c0003t0007g0022 a0002c0003t0007g0022	1	8	0.1250	-15	c.64- others(30): Show c.64-1743_64-1729delTTTTTTTTTTTTTTT	CD82	ENSG00000085117.12	transcript	ENST00000227155.9	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD86_chr3_122050362_122126136	122101508	AAAAAAAT others(8): Show AAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01517.hp1 HG01516.hp2 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	2	293	0.0068	-15	c.65- others(30): Show c.65-2002_65-1988delAAAAATATATATATA	CD86	ENSG00000114013.16	transcript	ENST00000330540.7	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
CD99L2_chrX_150761336_150903668	150824162	GAGGAGGA others(8): Show GAGGAGGAGGAGGAGA	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0192 a0001c0001t0009g0192	1	210	0.0048	-15	c.130 others(32): Show c.130+7054_130+7068delTCTCCTCCTCCTCCT	CD99L2	ENSG00000102181.22	transcript	ENST00000370377.8	protein_coding	2/10			chrX	TogoVar
CDA_chr1_20584097_20623903	20585465	CTATTATT others(8): Show CTATTATTATTATTAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp1 HG02486.hp2 HG02965.hp2 others(2): Show HG01106.hp1 HG02486.hp2 HG02965.hp2 HG03516.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0002 a0001c0001t0003 a0001c0002t0002	a0001c0001t0003g0290 a0001c0002t0002g0287 a0001c0002t0002g0288 others(2): Show a0001c0001t0003g0290 a0001c0002t0002g0287 a0001c0002t0002g0288 a0001c0002t0002g0289 a0001c0002t0002g0291	5	44	0.1136	-15	c.-36 others(26): Show c.-3664_-3650delTATTATTATTATTAT	CDA	ENSG00000158825.6	transcript	ENST00000375071.4	protein_coding		3631		chr1	TogoVar
CDA_chr1_20584097_20623903	20599637	TAAAATAA others(8): Show TAAAATAAAATAAAAC	T T	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0269 a0001c0002t0002g0269	1	416	0.0024	-15	c.155 others(32): Show c.155-5276_155-5262delCAAAATAAAATAAAA	CDA	ENSG00000158825.6	transcript	ENST00000375071.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
CDA_chr1_20584097_20623903	20602149	AGGAGGGG others(8): Show AGGAGGGGAGGGGAGG	A A	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0269 a0001c0002t0002g0269	1	410	0.0024	-15	c.155 others(32): Show c.155-2762_155-2748delGAGGGGAGGGGAGGG	CDA	ENSG00000158825.6	transcript	ENST00000375071.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
CDC14A_chr1_100347506_100525277	100412710	ATATATAT others(8): Show ATATATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0145 a0001c0001t0005g0145	1	247	0.0040	-15	c.310 others(34): Show c.310-11467_310-11453delTTATATATATATATT	CDC14A	ENSG00000079335.20	transcript	ENST00000336454.5	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
CDC14B_chr9_96495113_96624843	96583370	TTTATTAT others(8): Show TTTATTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG01978.hp2 NA18970.hp2 HG01978.hp2 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0143 a0001c0001t0001g0139 a0001c0001t0001g0143	2	113	0.0177	-15	c.161 others(34): Show c.161-17902_161-17888delTAATAATAATAATAA	CDC14B	ENSG00000081377.17	transcript	ENST00000375241.6	protein_coding	1/13			chr9	TogoVar
CDC14B_chr9_96495113_96624843	96604342	TTTATTAT others(8): Show TTTATTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG01081.hp2 others(9): Show HG01069.hp1 HG01071.hp1 HG01081.hp2 HG01891.hp2 HG02970.hp2 HG02976.hp1 HG03453.hp1 HG03579.hp1 NA18522.hp1 NA18906.hp1 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0010 a0001c0001t0011 a0001c0002t0002 a0001c0001t0010 a0001c0001t0011 a0001c0002t0002	a0001c0001t0010g0104 a0001c0001t0010g0187 a0001c0001t0011g0014 others(9): Show a0001c0001t0010g0104 a0001c0001t0010g0187 a0001c0001t0011g0014 a0001c0001t0011g0103 a0001c0002t0002g0094 a0001c0002t0002g0095 a0001c0002t0002g0096 a0001c0002t0002g0097 a0001c0002t0002g0098 a0001c0002t0002g0099 a0001c0002t0002g0100 a0001c0002t0002g0102	12	69	0.1739	-15	c.160 others(34): Show c.160+14862_160+14876delTAATAATAATAATAA	CDC14B	ENSG00000081377.17	transcript	ENST00000375241.6	protein_coding	1/13			chr9	TogoVar
CDC14B_chr9_96495113_96624843	96606332	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02723.hp2 HG02895.hp2 others(1): Show HG01081.hp1 HG02723.hp2 HG02895.hp2 HG03195.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0002 a0001c0002t0004 a0002c0003t0002 a0001c0002t0002 a0001c0002t0004 a0002c0003t0002	a0001c0002t0002g0198 a0001c0002t0002g0199 a0001c0002t0004g0183 others(1): Show a0001c0002t0002g0198 a0001c0002t0002g0199 a0001c0002t0004g0183 a0002c0003t0002g0200	4	127	0.0315	-15	c.160 others(34): Show c.160+12872_160+12886delTTTTTTTTTTTTTTT	CDC14B	ENSG00000081377.17	transcript	ENST00000375241.6	protein_coding	1/13			chr9	TogoVar
CDC16_chr13_114229897_114277723	114234941	TGCGGCCT others(8): Show TGCGGCCTTCGAGTCC	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0002 a0001c0001t0016g0002	1	378	0.0026	-15	c.-12 others(24): Show c.-128_-114delGCGGCCTTCGAGTCC	CDC16	ENSG00000130177.16	transcript	ENST00000356221.8	protein_coding	1/18	114	INFO_REALIGN_3_PRIME	chr13	TogoVar
CDC23_chr5_138182650_138218323	138195552	ATTATATA others(8): Show ATTATATATAATATAT	A A	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG02145.hp1 HG02280.hp1 others(6): Show HG00741.hp1 HG02145.hp1 HG02280.hp1 HG02559.hp1 HG02630.hp1 HG02717.hp2 HG03195.hp2 HG03225.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0031 a0001c0001t0001g0119 others(2): Show a0001c0001t0001g0014 a0001c0001t0001g0031 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0122	9	390	0.0231	-15	c.101 others(34): Show c.1012+2632_1012+2646delATATATTATATATAA	CDC23	ENSG00000094880.11	transcript	ENST00000394886.7	protein_coding	9/15			chr5	TogoVar
CDC25C_chr5_138280269_138336804	138321750	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	96	0.0104	-15	c.460 others(32): Show c.460-2391_460-2377delTTTTTTTTTTTTTTT	CDC25C	ENSG00000158402.21	transcript	ENST00000323760.11	protein_coding	6/13			chr5	TogoVar
CDC27_chr17_47112703_47194295	47114492	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp1 HG01167.hp2 HG01169.hp1 others(23): Show HG01081.hp1 HG01167.hp2 HG01169.hp1 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01943.hp2 HG01978.hp1 HG02015.hp1 HG02040.hp1 HG02083.hp1 HG02258.hp1 HG02293.hp1 HG02647.hp1 HG02895.hp2 HG02897.hp2 HG03471.hp2 HG03942.hp2 NA18955.hp1 NA18968.hp1 NA18982.hp2 NA18999.hp2 NA19070.hp1 NA19078.hp1 NA19085.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0059 a0001c0001t0001g0069 a0001c0001t0003g0053 others(23): Show a0001c0001t0001g0059 a0001c0001t0001g0069 a0001c0001t0003g0053 a0001c0001t0003g0055 a0001c0001t0003g0219 a0001c0001t0003g0222 a0001c0001t0003g0227 a0001c0001t0003g0228 a0001c0001t0003g0229 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0234 a0001c0001t0003g0235 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0241 a0001c0001t0003g0244 a0001c0001t0003g0245 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0253 a0001c0001t0003g0254	26	28	0.9286	-15	c.64 others(26): Show c.6428_*6442delAAAAAAAAAAAAAAA	CDC27	ENSG00000004897.12	transcript	ENST00000066544.8	protein_coding		3210		chr17	TogoVar
CDC27_chr17_47112703_47194295	47114992	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02683.hp1 NA18989.hp2 HG02683.hp1 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0125 a0001c0001t0001g0099 a0001c0001t0001g0125	2	71	0.0282	-15	c.59 others(26): Show c.5928_*5942delAAAAAAAAAAAAAAA	CDC27	ENSG00000004897.12	transcript	ENST00000066544.8	protein_coding		2710		chr17	TogoVar
CDC27_chr17_47112703_47194295	47115723	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG01358.hp1 others(7): Show HG01070.hp2 HG01071.hp1 HG01358.hp1 HG01361.hp1 HG01516.hp2 HG03239.hp2 HG03490.hp2 HG06807.hp1 NA18990.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0002t0005 a0001c0004t0010 a0001c0001t0001 a0001c0002t0005 a0001c0004t0010	a0001c0001t0001g0005 a0001c0001t0001g0136 a0001c0001t0001g0189 others(6): Show a0001c0001t0001g0005 a0001c0001t0001g0136 a0001c0001t0001g0189 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0002t0005g0044 a0001c0004t0010g0071	10	28	0.3571	-15	c.51 others(26): Show c.5197_*5211delTTTTTTTTTTTTTTT	CDC27	ENSG00000004897.12	transcript	ENST00000066544.8	protein_coding		1979		chr17	TogoVar
CDC34_chr19_526760_547087	526765	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0088 a0001c0001t0001g0088	1	62	0.0161	-15	c.-51 others(26): Show c.-5166_-5152delTTTTTTTTTTTTTTT	CDC34	ENSG00000099804.9	transcript	ENST00000215574.9	protein_coding		4994		chr19	TogoVar
CDC42BPA_chr1_226984865_227323492	227000093	TATAATAA others(8): Show TATAATAATAATAATA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02886.hp1 HG02922.hp2 others(2): Show HG02258.hp2 HG02886.hp1 HG02922.hp2 HG03471.hp2 NA19240.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0002c0002 a0008c0012 a0001c0001 a0002c0002 a0008c0012	a0001c0001t0027 a0002c0002t0002 a0008c0012t0001 a0001c0001t0027 a0002c0002t0002 a0008c0012t0001	a0001c0001t0027g0021 a0002c0002t0002g0238 a0008c0012t0001g0073 others(2): Show a0001c0001t0027g0021 a0002c0002t0002g0238 a0008c0012t0001g0073 a0008c0012t0001g0074 a0008c0012t0001g0075	5	116	0.0431	-15	c.497 others(34): Show c.4975+4886_4975+4900delTATTATTATTATTAT	CDC42BPA	ENSG00000143776.20	transcript	ENST00000366766.8	protein_coding	35/36			chr1	TogoVar

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