Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
CSNKA2IP_chr3_88333456_88472594	88457695	CAAAATAA others(8): Show CAAAATAAAATAAAAT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02074.hp1 HG02735.hp2 others(5): Show HG01243.hp2 HG02074.hp1 HG02735.hp2 HG06807.hp2 NA18970.hp2 NA18973.hp2 NA19054.hp2 NA19077.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0006 a0001c0001 a0001c0004 a0002c0006	a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 a0002c0006t0001	a0001c0001t0001g0136 a0001c0001t0002g0290 a0001c0001t0002g0291 others(5): Show a0001c0001t0001g0136 a0001c0001t0002g0290 a0001c0001t0002g0291 a0001c0001t0002g0293 a0001c0001t0002g0366 a0001c0004t0001g0090 a0001c0004t0001g0236 a0002c0006t0001g0003	8	386	0.0207	-15	c.-27 others(34): Show c.-270-7347_-270-7333delAAAATAAAATAAAAT		CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
CSPP1_chr8_67059392_67201614	67159509	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03225.hp1 NA18906.hp1 NA19043.hp2 HG03225.hp1 NA18906.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038	3	158	0.0190	-15	c.253 others(32): Show c.2538+387_2538+401delTTTTTTTTTTTTTTT		CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	21/30					INFO_REALIGN_3_PRIME	chr8	TogoVar
CSRNP1_chr3_39136855_39158591	39155789	CCAGTGCT others(8): Show CCAGTGCTTGATAAGA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0064	1	430	0.0023	-15	c.-24 others(26): Show c.-2407_-2393delTCTTATCAAGCACTG		CSRNP1	ENSG00000144655.15	transcript	ENST00000273153.10	protein_coding					2199		chr3	TogoVar
CSRNP3_chr2_165464698_165694407	165584762	GATTAGTT others(8): Show GATTAGTTTATTTAGC	G G	intron_variant intron_variant	MODIFIER	NA18986.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	1	246	0.0041	-15	c.-23 others(34): Show c.-23-10279_-23-10265delTTAGTTTATTTAGCA		CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	3/6					INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165653972	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0004 a0005c0008t0004	a0005c0008t0004g0157 a0005c0008t0004g0157	1	246	0.0041	-15	c.149 others(32): Show c.149-3767_149-3753delAAAAAAAAAAAAAAA		CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/6					INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRP3_chr11_19177030_19206983	19197356	CCCTCCCT others(8): Show CCCTCCCTCCCTCCCT	C C	intron_variant intron_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0306 a0001c0001t0001g0306	1	416	0.0024	-15	c.-29 others(32): Show c.-29+4583_-29+4597delAGGGAGGGAGGGAGG		CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5						chr11	TogoVar
CST2_chr20_23818769_23831729	23820531	GTAAAAGG others(8): Show GTAAAAGGAACACAAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	470	0.0021	-15	c.34 others(26): Show c.3474_*3488delTTTGTGTTCCTTTTA		CST2	ENSG00000170369.4	transcript	ENST00000304725.3	protein_coding					3237		chr20	TogoVar
CST6_chr11_66007008_66018505	66011298	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0031	1	414	0.0024	-15	c.-74 others(24): Show c.-746_-732delTTTTTTTTTTTTTTT		CST6	ENSG00000175315.3	transcript	ENST00000312134.3	protein_coding					709		chr11	TogoVar
CST9L_chr20_23559732_23573484	23571701	GGTCTTTT others(8): Show GGTCTTTTGTGGTATT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19079.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	392	0.0026	-15	c.-32 others(26): Show c.-3266_-3252delAATACCACAAAAGAC		CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding					3218		chr20	TogoVar
CSTF1_chr20_56387645_56411362	56400169	GTGTTTAA others(8): Show GTGTTTAAGTTTGCAT	G G	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0041 a0001c0001t0003g0041	1	422	0.0024	-15	c.103 others(32): Show c.1036+815_1036+829delTTTAAGTTTGCATTG		CSTF1	ENSG00000101138.12	transcript	ENST00000217109.9	protein_coding	5/5					INFO_REALIGN_3_PRIME	chr20	TogoVar
CSTF2T_chr10_51690486_51704595	51697903	CTGTATAC others(8): Show CTGTATACCTCCTCCT	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00438.hp1 HG02258.hp2 HG02630.hp2 others(7): Show HG00438.hp1 HG02258.hp2 HG02630.hp2 HG02896.hp2 HG02897.hp2 NA18942.hp1 NA18945.hp2 NA18983.hp1 NA18995.hp2 NA19088.hp1	a0002 a0002	a0002c0005 a0002c0007 a0002c0005 a0002c0007	a0002c0005t0001 a0002c0007t0002 a0002c0005t0001 a0002c0007t0002	a0002c0005t0001g0000 a0002c0007t0002g0000 a0002c0005t0001g0000 a0002c0007t0002g0000	10	428	0.0234	-15	c.163 others(24): Show c.1632_1646delAGGAGGAGGTATACA	p.Gly others(13): Show p.Gly545_Gln549del	CSTF2T	ENSG00000177613.9	transcript	ENST00000331173.6	protein_coding	1/1	1692/4110	1632/1851	544/616			chr10	TogoVar
CSTF3_chr11_33079584_33166480	33163908	TATATATA others(8): Show TATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0316 a0001c0001t0001g0316	1	360	0.0028	-15	c.-25 others(26): Show c.-2598_-2584delTATATATATATATAT		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding					2429		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163910	TATATATA others(8): Show TATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0248 a0001c0001t0001g0248	1	360	0.0028	-15	c.-26 others(26): Show c.-2600_-2586delTATATATATATATAT		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding					2431		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163913	ATATATAT others(8): Show ATATATATATATATTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp1 HG03041.hp1 HG01433.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0319 a0001c0001t0007g0193 a0001c0001t0001g0319 a0001c0001t0007g0193	2	360	0.0056	-15	c.-26 others(26): Show c.-2603_-2589delAAATATATATATATA		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding					2434		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163919	ATATATAT others(8): Show ATATATATTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	360	0.0028	-15	c.-26 others(26): Show c.-2609_-2595delAAAAAAAAATATATA		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding					2440		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163925	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG02165.hp1 HG04184.hp1 others(5): Show HG00639.hp2 HG02165.hp1 HG04184.hp1 NA18957.hp1 NA18964.hp1 NA19004.hp1 NA19065.hp1 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0041 a0001c0001t0002g0043 others(5): Show a0001c0001t0002g0013 a0001c0001t0002g0041 a0001c0001t0002g0043 a0001c0001t0002g0049 a0001c0001t0002g0073 a0001c0001t0002g0083 a0001c0001t0002g0092 a0001c0001t0002g0110	8	360	0.0222	-15	c.-26 others(26): Show c.-2615_-2601delAAAAAAAAAAAAAAA		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding					2446		chr11	TogoVar
CT45A1_chrX_135708639_135728228	135715406	TTATATAT others(8): Show TTATATATAATACTTA	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0011 a0002c0002t0001g0011	1	57	0.0175	-15	c.-7+ others(30): Show c.-7+1738_-7+1752delTAATACTTATATATA		CT45A1	ENSG00000268940.6	transcript	ENST00000594565.6	protein_coding	1/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
CT45A7_chrX_135824229_135842280	135824584	TAAACGAG others(8): Show TAAACGAGTTCTTAGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0005 a0005c0005t0005	a0005c0005t0005g0019 a0005c0005t0005g0019	1	19	0.0526	-15	c.48 others(26): Show c.4841_*4855delCCTAAGAACTCGTTT		CT45A7	ENSG00000273696.5	transcript	ENST00000610598.5	protein_coding					4644		chrX	TogoVar
CT47A4_chrX_120962886_120976208	120965367	CTGTGCGG others(8): Show CTGTGCGGTCGGTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG03041.hp2 HG02818.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	2	164	0.0122	-15	c.26 others(26): Show c.2676_*2690delAGAACCGACCGCACA		CT47A4	ENSG00000230594.3	transcript	ENST00000415858.3	protein_coding					2518		chrX	TogoVar
CT47A6_chrX_120953165_120966487	120955623	CTGTGCGG others(8): Show CTGTGCGGTCGGTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	110	0.0091	-15	c.26 others(26): Show c.2699_*2713delAGAACCGACCGCACA		CT47A6	ENSG00000226023.6	transcript	ENST00000419194.3	protein_coding					2541		chrX	TogoVar
CT47A6_chrX_120953165_120966487	120955658	CGTCTGGT others(8): Show CGTCTGGTTCCTCTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	110	0.0091	-15	c.26 others(26): Show c.2664_*2678delACAGAGGAACCAGAC		CT47A6	ENSG00000226023.6	transcript	ENST00000419194.3	protein_coding					2506		chrX	TogoVar
CTAG1B_chrX_154612609_154624282	154618916	TCAGAACA others(8): Show TCAGAACAGAACAGAA	T T	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	254	0.0039	-15	c.269 others(28): Show c.269+19_269+33delTTCTGTTCTGTTCTG		CTAG1B	ENSG00000184033.14	transcript	ENST00000328435.3	protein_coding	1/2						chrX	TogoVar
CTBS_chr1_84544611_84579440	84548750	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00609.hp1 HG00621.hp1 others(35): Show HG00280.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00733.hp1 HG00735.hp1 HG01106.hp2 HG01109.hp2 HG01168.hp2 HG02109.hp1 HG02300.hp1 HG02451.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp2 HG02976.hp1 HG03139.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG04115.hp1 HG04228.hp1 NA18980.hp1 NA18994.hp2 NA19077.hp2 NA19090.hp2 NA21309.hp1	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0011	a0001c0001 a0003c0004 a0006c0011 others(1): Show a0001c0001 a0003c0004 a0006c0011 a0011c0016	a0001c0001t0011 a0003c0004t0002 a0003c0004t0009 others(3): Show a0001c0001t0011 a0003c0004t0002 a0003c0004t0009 a0003c0004t0024 a0006c0011t0002 a0011c0016t0002	a0001c0001t0011g0039 a0001c0001t0011g0101 a0003c0004t0002g0006 others(15): Show a0001c0001t0011g0039 a0001c0001t0011g0101 a0003c0004t0002g0006 a0003c0004t0002g0013 a0003c0004t0002g0045 a0003c0004t0002g0128 a0003c0004t0002g0129 a0003c0004t0002g0131 a0003c0004t0002g0132 a0003c0004t0002g0134 a0003c0004t0002g0135 a0003c0004t0002g0136 a0003c0004t0002g0137 a0003c0004t0009g0017 a0003c0004t0009g0133 a0003c0004t0024g0138 a0006c0011t0002g0127 a0011c0016t0002g0060	38	340	0.1118	-15	c.62 others(26): Show c.6234_*6248delAAAAAAAAAAAAAAA		CTBS	ENSG00000117151.13	transcript	ENST00000370630.6	protein_coding					860		chr1	TogoVar
CTBS_chr1_84544611_84579440	84560098	AAAGAAAG others(8): Show AAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0004 a0002c0005t0004	a0002c0005t0004g0112 a0002c0005t0004g0112	1	340	0.0029	-15	c.957 others(32): Show c.957+3144_957+3158delCTTTCTTTCTTTCTT		CTBS	ENSG00000117151.13	transcript	ENST00000370630.6	protein_coding	6/6						chr1	TogoVar
CTC1_chr17_8219815_8253056	8237665	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00423.hp1 others(191): Show HG00099.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01123.hp1 HG01168.hp1 HG01175.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01978.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG03041.hp2 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03654.hp1 HG03831.hp2 HG03834.hp2 HG04184.hp2 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18612.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp1 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18980.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18988.hp1 NA18990.hp1 NA18990.hp2 NA18992.hp2 NA18998.hp1 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19002.hp2 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0005 a0006 a0007 a0009 a0010 a0012 a0014	a0001c0002 a0001c0003 a0002c0001 others(12): Show a0001c0002 a0001c0003 a0002c0001 a0002c0010 a0002c0012 a0003c0004 a0003c0005 a0005c0008 a0005c0009 a0006c0007 a0007c0011 a0009c0015 a0010c0018 a0012c0020 a0014c0025	a0001c0002t0004 a0001c0003t0005 a0001c0003t0008 others(27): Show a0001c0002t0004 a0001c0003t0005 a0001c0003t0008 a0001c0003t0015 a0001c0003t0016 a0002c0001t0001 a0002c0001t0002 a0002c0001t0006 a0002c0001t0022 a0002c0001t0024 a0002c0001t0025 a0002c0001t0026 a0002c0001t0027 a0002c0001t0030 a0002c0001t0037 a0002c0001t0044 a0002c0001t0045 a0002c0010t0002 a0002c0012t0002 a0003c0004t0001 a0003c0004t0040 a0003c0005t0002 a0005c0008t0001 a0005c0009t0001 a0006c0007t0009 a0007c0011t0001 a0009c0015t0038 a0010c0018t0028 a0012c0020t0001 a0014c0025t0021	a0001c0002t0004g0053 a0001c0003t0005g0007 a0001c0003t0005g0013 others(122): Show a0001c0002t0004g0053 a0001c0003t0005g0007 a0001c0003t0005g0013 a0001c0003t0005g0019 a0001c0003t0005g0097 a0001c0003t0005g0098 a0001c0003t0005g0099 a0001c0003t0005g0103 a0001c0003t0005g0104 a0001c0003t0005g0110 a0001c0003t0005g0112 a0001c0003t0005g0115 a0001c0003t0008g0020 a0001c0003t0008g0111 a0001c0003t0008g0116 a0001c0003t0015g0113 a0001c0003t0015g0114 a0001c0003t0016g0101 a0002c0001t0001g0003 a0002c0001t0001g0005 a0002c0001t0001g0009 a0002c0001t0001g0010 a0002c0001t0001g0011 a0002c0001t0001g0021 a0002c0001t0001g0022 a0002c0001t0001g0124 a0002c0001t0001g0126 a0002c0001t0001g0148 a0002c0001t0001g0149 a0002c0001t0001g0150 a0002c0001t0001g0151 a0002c0001t0001g0152 a0002c0001t0001g0154 a0002c0001t0001g0156 a0002c0001t0001g0158 a0002c0001t0001g0217 a0002c0001t0001g0220 a0002c0001t0001g0226 a0002c0001t0001g0227 a0002c0001t0001g0229 a0002c0001t0001g0236 a0002c0001t0001g0237 a0002c0001t0001g0238 a0002c0001t0001g0239 a0002c0001t0001g0240 a0002c0001t0001g0241 a0002c0001t0001g0242 a0002c0001t0001g0243 a0002c0001t0001g0244 a0002c0001t0001g0250 a0002c0001t0001g0251 a0002c0001t0001g0253 a0002c0001t0001g0254 a0002c0001t0001g0255 a0002c0001t0001g0258 a0002c0001t0001g0260 a0002c0001t0001g0261 a0002c0001t0002g0001 a0002c0001t0002g0002 a0002c0001t0002g0012 a0002c0001t0002g0014 a0002c0001t0002g0016 a0002c0001t0002g0017 a0002c0001t0002g0018 a0002c0001t0002g0040 a0002c0001t0002g0047 a0002c0001t0002g0052 a0002c0001t0002g0055 a0002c0001t0002g0056 a0002c0001t0002g0057 a0002c0001t0002g0058 a0002c0001t0002g0060 a0002c0001t0002g0061 a0002c0001t0002g0062 a0002c0001t0002g0069 a0002c0001t0002g0070 a0002c0001t0002g0073 a0002c0001t0002g0077 a0002c0001t0002g0079 a0002c0001t0002g0084 a0002c0001t0002g0087 a0002c0001t0002g0088 a0002c0001t0002g0089 a0002c0001t0002g0090 a0002c0001t0002g0311 a0002c0001t0006g0153 a0002c0001t0006g0228 a0002c0001t0006g0247 a0002c0001t0006g0248 a0002c0001t0022g0075 a0002c0001t0024g0039 a0002c0001t0025g0078 a0002c0001t0026g0076 a0002c0001t0027g0051 a0002c0001t0030g0041 a0002c0001t0037g0252 a0002c0001t0044g0037 a0002c0001t0045g0038 a0002c0010t0002g0050 a0002c0012t0002g0068 a0003c0004t0001g0006 a0003c0004t0001g0034 a0003c0004t0001g0121 a0003c0004t0001g0314 a0003c0004t0001g0315 a0003c0004t0040g0122 a0003c0005t0002g0004 a0003c0005t0002g0063 a0003c0005t0002g0065 a0003c0005t0002g0066 a0003c0005t0002g0091 a0005c0008t0001g0043 a0005c0008t0001g0046 a0005c0008t0001g0086 a0005c0009t0001g0042 a0005c0009t0001g0044 a0006c0007t0009g0109 a0006c0007t0009g0118 a0006c0007t0009g0119 a0006c0007t0009g0120 a0007c0011t0001g0106 a0009c0015t0038g0117 a0010c0018t0028g0108 a0012c0020t0001g0187 a0014c0025t0021g0105	194	402	0.4826	-15	c.648 others(30): Show c.648-161_648-147delTTTTTTTTTTTTTTT		CTC1	ENSG00000178971.17	transcript	ENST00000651323.1	protein_coding	4/22						chr17	TogoVar
CTCF_chr16_67557526_67644177	67629746	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03139.hp1 HG02486.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	a0001c0001t0002g0146 a0001c0001t0007g0130 a0001c0001t0002g0146 a0001c0001t0007g0130	2	168	0.0119	-15	c.183 others(32): Show c.1837+245_1837+259delTTTTTTTTTTTTTTT		CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	10/11					INFO_REALIGN_3_PRIME	chr16	TogoVar
CTDP1_chr18_79674803_79759503	79752236	GGCACCGG others(8): Show GGCACCGGCTGGTTAT	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0005 a0005c0011t0005	a0005c0011t0005g0370 a0005c0011t0005g0370	1	378	0.0027	-15	c.274 others(34): Show c.2748-1412_2748-1398delCCGGCTGGTTATGCA		CTDP1	ENSG00000060069.18	transcript	ENST00000613122.5	protein_coding	12/12					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48635289	GCTTTTTC others(8): Show GCTTTTTCTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01106.hp1 HG02132.hp2 others(4): Show HG00639.hp2 HG01106.hp1 HG02132.hp2 HG02135.hp1 NA19030.hp2 NA20905.hp2 NA21309.hp2	a0002 a0002	a0002c0004 a0002c0012 a0002c0013 a0002c0004 a0002c0012 a0002c0013	a0002c0004t0005 a0002c0004t0014 a0002c0004t0016 others(3): Show a0002c0004t0005 a0002c0004t0014 a0002c0004t0016 a0002c0004t0024 a0002c0012t0002 a0002c0013t0001	a0002c0004t0005g0054 a0002c0004t0014g0114 a0002c0004t0016g0012 others(4): Show a0002c0004t0005g0054 a0002c0004t0014g0114 a0002c0004t0016g0012 a0002c0004t0016g0041 a0002c0004t0024g0113 a0002c0012t0002g0123 a0002c0013t0001g0016	7	144	0.0486	-15	c.181 others(32): Show c.181-1312_181-1298delTTTCTTTTTCTTTTT		CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	2/11					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48867822	AAATAATA others(8): Show AAATAATAATAATAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 HG00621.hp2 HG00639.hp1 others(46): Show HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp2 HG01106.hp1 HG01109.hp1 HG01243.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01934.hp1 HG01952.hp1 HG02080.hp1 HG02080.hp2 HG02258.hp2 HG02451.hp1 HG02559.hp2 HG02615.hp1 HG02630.hp1 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp2 HG02818.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03490.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp2 HG04115.hp2 NA18945.hp1 NA18972.hp1 NA18972.hp2 NA19043.hp2 NA19068.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0002c0004 a0002c0013 a0003c0007 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(24): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0017 a0001c0001t0019 a0001c0001t0021 a0001c0001t0026 a0001c0001t0040 a0001c0001t0043 a0001c0001t0044 a0001c0001t0052 a0001c0002t0001 a0001c0002t0029 a0001c0002t0034 a0001c0002t0049 a0001c0003t0001 a0001c0003t0007 a0001c0005t0001 a0002c0004t0016 a0002c0013t0001 a0003c0007t0013 a0006c0006t0001	a0001c0001t0001g0032 a0001c0001t0001g0036 a0001c0001t0001g0066 others(46): Show a0001c0001t0001g0032 a0001c0001t0001g0036 a0001c0001t0001g0066 a0001c0001t0001g0071 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0129 a0001c0001t0004g0024 a0001c0001t0006g0001 a0001c0001t0006g0021 a0001c0001t0006g0060 a0001c0001t0006g0063 a0001c0001t0007g0040 a0001c0001t0007g0046 a0001c0001t0008g0007 a0001c0001t0008g0023 a0001c0001t0008g0139 a0001c0001t0008g0142 a0001c0001t0009g0003 a0001c0001t0009g0037 a0001c0001t0012g0122 a0001c0001t0013g0127 a0001c0001t0017g0100 a0001c0001t0019g0132 a0001c0001t0021g0141 a0001c0001t0026g0125 a0001c0001t0040g0073 a0001c0001t0043g0053 a0001c0001t0044g0144 a0001c0001t0052g0126 a0001c0002t0001g0106 a0001c0002t0029g0110 a0001c0002t0034g0015 a0001c0002t0049g0072 a0001c0003t0001g0044 a0001c0003t0001g0116 a0001c0003t0001g0121 a0001c0003t0007g0052 a0001c0005t0001g0079 a0002c0004t0016g0012 a0002c0013t0001g0016 a0003c0007t0013g0027 a0006c0006t0001g0099	49	144	0.3403	-15	c.82 others(26): Show c.8264_*8278delAATAATAATAATAAT		CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding					4606		chr18	TogoVar
CTNNA1_chr5_138748425_138940034	138755845	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG02486.hp2 HG02809.hp1 others(3): Show HG00741.hp1 HG02486.hp2 HG02809.hp1 HG02895.hp2 HG03225.hp2 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0009 a0001c0002 a0001c0004 a0001c0009	a0001c0002t0003 a0001c0004t0004 a0001c0009t0004 a0001c0002t0003 a0001c0004t0004 a0001c0009t0004	a0001c0002t0003g0033 a0001c0002t0003g0034 a0001c0004t0004g0005 others(3): Show a0001c0002t0003g0033 a0001c0002t0003g0034 a0001c0004t0004g0005 a0001c0004t0004g0007 a0001c0004t0004g0180 a0001c0009t0004g0006	6	180	0.0333	-15	c.-3+ others(30): Show c.-3+2356_-3+2370delTTTTTTTTTTTTTTT		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138777876	AGAGGGAG others(8): Show AGAGGGAGAGGGAGAG	A A	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02129.hp1 HG02280.hp1 others(4): Show HG00741.hp2 HG02129.hp1 HG02280.hp1 HG02818.hp1 HG03710.hp1 HG03710.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0012 a0001c0013	a0001c0001t0001 a0001c0002t0002 a0001c0002t0003 others(3): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0003 a0001c0005t0001 a0001c0012t0003 a0001c0013t0003	a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0002t0002g0071 others(4): Show a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0002t0002g0071 a0001c0002t0003g0025 a0001c0005t0001g0156 a0001c0012t0003g0019 a0001c0013t0003g0031	7	180	0.0389	-15	c.-2- others(30): Show c.-2-4020_-2-4006delAGAGGAGGGAGAGGG		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138845915	TTTTTTTG others(8): Show TTTTTTTGTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp2 others(91): Show HG00099.hp1 HG00099.hp2 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00639.hp2 HG00642.hp2 HG00735.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01109.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG01243.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01515.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp2 HG01943.hp2 HG01975.hp2 HG01981.hp2 HG01993.hp2 HG02074.hp1 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02965.hp2 HG02970.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18961.hp2 NA18983.hp1 NA18986.hp1 NA18986.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19043.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19076.hp1 NA19076.hp2 NA19085.hp1 NA19240.hp1 NA20805.hp1 NA20905.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0005 a0001c0011 others(4): Show a0001c0001 a0001c0005 a0001c0011 a0001c0014 a0002c0006 a0003c0007 a0004c0010	a0001c0001t0001 a0001c0001t0007 a0001c0005t0001 others(5): Show a0001c0001t0001 a0001c0001t0007 a0001c0005t0001 a0001c0011t0001 a0001c0014t0001 a0002c0006t0001 a0003c0007t0001 a0004c0010t0001	a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 others(91): Show a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0007g0111 a0001c0001t0007g0112 a0001c0005t0001g0156 a0001c0005t0001g0167 a0001c0005t0001g0168 a0001c0011t0001g0107 a0001c0014t0001g0145 a0002c0006t0001g0090 a0002c0006t0001g0095 a0003c0007t0001g0099 a0003c0007t0001g0100 a0004c0010t0001g0169	94	180	0.5222	-15	c.106 others(36): Show c.1062+18213_1062+18227delTTTTTTGTTTTTTTG		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	7/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA2_chr2_79508051_80653780	79893990	TTTCTTCT others(8): Show TTTCTTCTTCTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02965.hp2 HG03471.hp1 HG02109.hp1 HG02965.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0010 a0001c0001 a0001c0002 a0001c0010	a0001c0001t0001 a0001c0002t0003 a0001c0010t0001 a0001c0001t0001 a0001c0002t0003 a0001c0010t0001	a0001c0001t0001g0033 a0001c0002t0003g0036 a0001c0010t0001g0024 a0001c0001t0001g0033 a0001c0002t0003g0036 a0001c0010t0001g0024	3	68	0.0441	-15	c.853 others(34): Show c.853-15543_853-15529delTTCTTCTTCTTCTTC		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	6/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80055648	GACTGCAG others(8): Show GACTGCAGAGCTGCAC	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03130.hp2 HG03453.hp1 HG02886.hp1 HG03130.hp2 HG03453.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0013 a0001c0002 a0001c0004 a0001c0013	a0001c0002t0001 a0001c0004t0001 a0001c0013t0001 a0001c0002t0001 a0001c0004t0001 a0001c0013t0001	a0001c0002t0001g0023 a0001c0004t0001g0032 a0001c0013t0001g0062 a0001c0002t0001g0023 a0001c0004t0001g0032 a0001c0013t0001g0062	3	68	0.0441	-15	c.105 others(38): Show c.1056+145852_1056+145866delACTGCAGAGCTGCAC		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18						chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80071557	CCTGAGAT others(8): Show CCTGAGATGAAAACCA	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02258.hp1 HG02647.hp1 others(7): Show HG01167.hp2 HG02258.hp1 HG02647.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp2 HG03225.hp2 NA18906.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0010 a0001c0011 a0003c0015	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0001c0004t0001 a0001c0010t0001 a0001c0011t0001 a0003c0015t0001	a0001c0001t0001g0030 a0001c0001t0001g0067 a0001c0001t0002g0027 others(7): Show a0001c0001t0001g0030 a0001c0001t0001g0067 a0001c0001t0002g0027 a0001c0002t0001g0007 a0001c0003t0001g0026 a0001c0004t0001g0006 a0001c0004t0001g0059 a0001c0010t0001g0024 a0001c0011t0001g0051 a0003c0015t0001g0014	10	68	0.1471	-15	c.105 others(38): Show c.1056+161763_1056+161777delGAGATGAAAACCACT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80079828	TAAATAAA others(8): Show TAAATAAAATAAAATA	T T	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	68	0.0147	-15	c.105 others(38): Show c.1056+170073_1056+170087delAATAAAATAAAATAA		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80232341	GTTTGTTT others(8): Show GTTTGTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03471.hp2 HG02886.hp2 HG03471.hp2	a0001 a0002 a0001 a0002	a0001c0009 a0002c0006 a0001c0009 a0002c0006	a0001c0009t0001 a0002c0006t0001 a0001c0009t0001 a0002c0006t0001	a0001c0009t0001g0003 a0002c0006t0001g0060 a0001c0009t0001g0003 a0002c0006t0001g0060	2	68	0.0294	-15	c.105 others(38): Show c.1057-160866_1057-160852delGTTTTTTTTTTTTTT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA3_chr10_65907523_67701195	66199786	TATATATA others(8): Show TATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0002 a0001c0003t0008g0002	1	46	0.0217	-15	c.188 others(36): Show c.1884+80669_1884+80683delTATATATATATATAT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	13/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66199795	ATATATAT others(8): Show ATATATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	46	0.0217	-15	c.188 others(36): Show c.1884+80660_1884+80674delAAAAATATATATATA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	13/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66367850	TATAATAA others(8): Show TATAATAATAATAATA	T T	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0024 a0001c0001t0002g0024	1	46	0.0217	-15	c.173 others(36): Show c.1732+11287_1732+11301delTATTATTATTATTAT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66367877	AATAATTA others(8): Show AATAATTATTATTATT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01243.hp2 HG01070.hp1 HG01243.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0021 a0002c0002t0005 a0001c0001t0021 a0002c0002t0005	a0001c0001t0021g0012 a0002c0002t0005g0014 a0001c0001t0021g0012 a0002c0002t0005g0014	2	46	0.0435	-15	c.173 others(36): Show c.1732+11260_1732+11274delAATAATAATAATTAT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66367880	AATTATTA others(8): Show AATTATTATTATTATT	A A	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0043 a0001c0001t0004g0043	1	46	0.0217	-15	c.173 others(36): Show c.1732+11257_1732+11271delAATAATAATAATAAT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66487181	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02280.hp2 HG06807.hp1 HG01243.hp1 HG02280.hp2 HG06807.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0008 a0001c0001 a0002c0002 a0004c0008	a0001c0001t0016 a0002c0002t0001 a0004c0008t0005 a0001c0001t0016 a0002c0002t0001 a0004c0008t0005	a0001c0001t0016g0003 a0002c0002t0001g0035 a0004c0008t0005g0033 a0001c0001t0016g0003 a0002c0002t0001g0035 a0004c0008t0005g0033	3	46	0.0652	-15	c.153 others(36): Show c.1531+33421_1531+33435delAAAAAAAAAAAAAAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	11/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66570275	ATTTGTTT others(8): Show ATTTGTTTTGTTTTGT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0007 a0001c0001t0006g0008 a0001c0001t0006g0007 a0001c0001t0006g0008	2	46	0.0435	-15	c.137 others(36): Show c.1375-49517_1375-49503delACAAAACAAAACAAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66685345	ATATATAT others(8): Show ATATATATTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02647.hp1 NA18612.hp2 HG02647.hp1 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0004 a0001c0006t0001 a0001c0001t0004 a0001c0006t0001	a0001c0001t0004g0043 a0001c0006t0001g0001 a0001c0001t0004g0043 a0001c0006t0001g0001	2	46	0.0435	-15	c.128 others(36): Show c.1282-63576_1282-63562delAAAAAAAAATATATA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66729559	TATGTTCT others(8): Show TATGTTCTCACTTATA	T T	intron_variant intron_variant	MODIFIER	NA18960.hp1 NA19080.hp2 NA18960.hp1 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0024 a0001c0001t0004 a0001c0001t0024	a0001c0001t0004g0041 a0001c0001t0024g0044 a0001c0001t0004g0041 a0001c0001t0024g0044	2	46	0.0435	-15	c.128 others(36): Show c.1281+36690_1281+36704delTATAAGTGAGAACAT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67413277	CTTCATTC others(8): Show CTTCATTCATTCATCA	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03579.hp2 HG02965.hp2 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0019 a0002c0002t0004 a0001c0001t0019 a0002c0002t0004	a0001c0001t0019g0019 a0002c0002t0004g0028 a0001c0001t0019g0019 a0002c0002t0004g0028	2	46	0.0435	-15	c.579 others(36): Show c.579+108550_579+108564delTGATGAATGAATGAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	5/17						chr10	TogoVar
CTNNBL1_chr20_37689030_37877118	37854551	ATATTATT others(8): Show ATATTATTATTATTAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(64): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00642.hp2 HG01106.hp1 HG01109.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01261.hp1 HG01361.hp1 HG01496.hp1 HG01515.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02300.hp2 HG02523.hp2 HG02602.hp2 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp1 HG02809.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03195.hp1 HG03209.hp2 HG03540.hp1 HG03704.hp2 HG03710.hp2 HG03834.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18941.hp2 NA18946.hp1 NA18953.hp2 NA18960.hp1 NA18963.hp2 NA18964.hp2 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18982.hp2 NA18995.hp2 NA19003.hp2 NA19007.hp2 NA19010.hp1 NA19012.hp2 NA19063.hp2 NA19064.hp1 NA19081.hp1 NA19084.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0002 a0001c0001t0001g0021 a0001c0001t0001g0022 others(63): Show a0001c0001t0001g0002 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0095 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0109 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0159 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0193 a0001c0001t0001g0222 a0001c0001t0001g0235 a0001c0001t0001g0246 a0001c0003t0001g0032 a0001c0003t0001g0055	67	266	0.2519	-15	c.139 others(34): Show c.1393-5307_1393-5293delATTATTATTATTATT		CTNNBL1	ENSG00000132792.21	transcript	ENST00000361383.11	protein_coding	13/15					INFO_REALIGN_3_PRIME	chr20	TogoVar
CTNND2_chr5_10966836_11909446	11228353	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	26	0.0385	-15	c.176 others(34): Show c.1761+8323_1761+8337delTTTTTTTTTTTTTTT		CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	10/21						chr5	TogoVar
CTNND2_chr5_10966836_11909446	11240294	CACACCCA others(8): Show CACACCCAACACACAT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG03209.hp1 HG03453.hp1 HG00738.hp1 HG03209.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0001 a0001c0001t0001 a0001c0005t0001	a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0005t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0005t0001g0020	3	26	0.1154	-15	c.162 others(34): Show c.1629-3486_1629-3472delATGTGTGTTGGGTGT		CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	9/21						chr5	TogoVar

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