Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CSNKA2IP_chr3_88333456_88472594	88446030	TTTTCTTT others(9): Show TTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01361.hp2 HG01978.hp1 others(25): Show HG00558.hp1 HG01361.hp2 HG01978.hp1 HG02129.hp2 HG02135.hp1 HG02258.hp2 HG02647.hp2 HG02922.hp1 HG03041.hp1 HG03195.hp1 HG03490.hp1 HG03492.hp1 HG03540.hp2 HG03688.hp1 HG03927.hp1 NA18522.hp2 NA18612.hp1 NA18939.hp2 NA18965.hp1 NA18969.hp2 NA18971.hp2 NA18981.hp2 NA18983.hp2 NA19001.hp2 NA19091.hp1 NA20752.hp1 NA20905.hp1 NA21309.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0006 a0008 a0015 a0017	a0001c0001 a0001c0004 a0002c0002 others(6): Show a0001c0001 a0001c0004 a0002c0002 a0002c0024 a0003c0003 a0006c0008 a0008c0009 a0015c0026 a0017c0020	a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 a0001c0004t0002 a0002c0002t0001 a0002c0002t0003 a0002c0024t0002 a0003c0003t0001 a0006c0008t0002 a0008c0009t0002 a0015c0026t0001 a0017c0020t0001	a0001c0001t0001g0002 a0001c0001t0001g0112 a0001c0001t0001g0114 others(24): Show a0001c0001t0001g0002 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0131 a0001c0001t0001g0222 a0001c0001t0002g0257 a0001c0004t0001g0061 a0001c0004t0001g0104 a0001c0004t0001g0232 a0001c0004t0001g0233 a0001c0004t0001g0239 a0001c0004t0002g0349 a0002c0002t0001g0020 a0002c0002t0001g0091 a0002c0002t0001g0153 a0002c0002t0003g0270 a0002c0024t0002g0383 a0003c0003t0001g0060 a0003c0003t0001g0065 a0003c0003t0001g0084 a0003c0003t0001g0148 a0003c0003t0001g0160 a0003c0003t0001g0164 a0006c0008t0002g0371 a0008c0009t0002g0275 a0015c0026t0001g0069 a0017c0020t0001g0196	28	386	0.0725	-16	c.-27 others(37): Show c.-270-19002_-270-18987delCTTTCTTTCTTTCTTT	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88449818	GAGACACA others(9): Show GAGACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01256.hp1 HG01433.hp1 others(3): Show HG01175.hp2 HG01256.hp1 HG01433.hp1 HG02129.hp1 HG02145.hp2 NA19063.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0007 a0001c0001 a0005c0007	a0001c0001t0001 a0001c0001t0002 a0005c0007t0002 a0001c0001t0001 a0001c0001t0002 a0005c0007t0002	a0001c0001t0001g0195 a0001c0001t0002g0298 a0001c0001t0002g0308 others(3): Show a0001c0001t0001g0195 a0001c0001t0002g0298 a0001c0001t0002g0308 a0001c0001t0002g0351 a0005c0007t0002g0324 a0005c0007t0002g0335	6	386	0.0155	-16	c.-27 others(37): Show c.-270-15268_-270-15253delGACACACACACACACA	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88470725	TATATATA others(9): Show TATATATACATACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00423.hp1 HG00438.hp2 others(46): Show HG00280.hp2 HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00609.hp1 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01192.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01361.hp2 HG01515.hp1 HG01516.hp2 HG02027.hp1 HG02071.hp1 HG02083.hp2 HG02132.hp2 HG02155.hp1 HG02165.hp2 HG02258.hp1 HG02735.hp2 HG03669.hp1 HG03688.hp1 HG03704.hp1 NA18943.hp2 NA18949.hp2 NA18950.hp1 NA18954.hp1 NA18959.hp1 NA18961.hp2 NA18962.hp1 NA18984.hp1 NA18991.hp1 NA18993.hp1 NA18993.hp2 NA19005.hp1 NA19009.hp2 NA19054.hp1 NA19064.hp1 NA19075.hp2 NA19077.hp1 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA20805.hp1	a0001 a0007 a0017 others(1): Show a0001 a0007 a0017 a0019	a0001c0001 a0001c0012 a0001c0017 others(3): Show a0001c0001 a0001c0012 a0001c0017 a0007c0010 a0017c0020 a0019c0019	a0001c0001t0001 a0001c0001t0002 a0001c0012t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0012t0001 a0001c0017t0001 a0007c0010t0002 a0017c0020t0001 a0019c0019t0001	a0001c0001t0001g0049 a0001c0001t0001g0055 a0001c0001t0001g0056 others(46): Show a0001c0001t0001g0049 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0202 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0242 a0001c0001t0001g0250 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0330 a0001c0001t0002g0366 a0001c0012t0001g0037 a0001c0012t0001g0038 a0001c0017t0001g0226 a0007c0010t0002g0296 a0007c0010t0002g0297 a0007c0010t0002g0300 a0017c0020t0001g0196 a0019c0019t0001g0235	49	386	0.1269	-16	c.31 others(27): Show c.3164_*3179delATATATACATACACAC	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding		3132		chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88470727	TATATACA others(9): Show TATATACATACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG01074.hp2 HG01099.hp2 others(47): Show HG00544.hp1 HG01074.hp2 HG01099.hp2 HG01257.hp2 HG01258.hp1 HG02015.hp1 HG02056.hp2 HG02451.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG03017.hp1 HG03098.hp2 HG03540.hp1 HG03540.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp1 NA18939.hp1 NA18943.hp1 NA18944.hp1 NA18949.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18957.hp2 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18977.hp1 NA18980.hp2 NA18981.hp1 NA18983.hp2 NA19001.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19012.hp1 NA19058.hp2 NA19060.hp1 NA19063.hp1 NA19077.hp2 NA19079.hp1 NA19085.hp1 NA19088.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0001c0004 a0010c0014 a0001c0001 a0001c0004 a0010c0014	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0010c0014t0001	a0001c0001t0001g0053 a0001c0001t0001g0092 a0001c0001t0001g0093 others(46): Show a0001c0001t0001g0053 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0120 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0131 a0001c0001t0001g0169 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0177 a0001c0001t0001g0234 a0001c0001t0001g0249 a0001c0001t0002g0001 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0276 a0001c0001t0002g0277 a0001c0001t0002g0290 a0001c0001t0002g0291 a0001c0001t0002g0293 a0001c0001t0002g0353 a0001c0001t0002g0374 a0001c0001t0002g0376 a0001c0004t0002g0326 a0001c0004t0002g0327 a0001c0004t0002g0332 a0001c0004t0002g0347 a0010c0014t0001g0121 a0010c0014t0001g0122	50	386	0.1295	-16	c.31 others(27): Show c.3166_*3181delATATACATACACACAC	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding		3134		chr3	TogoVar
CSPG4_chr15_75669322_75717848	75705953	GTATGTCT others(9): Show GTATGTCTGTGTGTATC	G G	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0016 a0016	a0016c0030 a0016c0030	a0016c0030t0001 a0016c0030t0001	a0016c0030t0001g0079 a0016c0030t0001g0079	1	374	0.0027	-16	c.88+ others(31): Show c.88+6699_88+6714delGATACACACAGACATA	CSPG4	ENSG00000173546.7	transcript	ENST00000308508.5	protein_coding	1/9			chr15	TogoVar
CSPP1_chr8_67059392_67201614	67159961	CTTTTCTT others(9): Show CTTTTCTTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0052	1	158	0.0063	-16	c.253 others(33): Show c.2538+828_2538+843delTCTTTTCTTTTCTTTT	CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	21/30		INFO_REALIGN_3_PRIME	chr8	TogoVar
CSPP1_chr8_67059392_67201614	67186970	CATCTATC others(9): Show CATCTATCTATCTATCT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02486.hp1 HG02615.hp2 others(4): Show HG02055.hp2 HG02486.hp1 HG02615.hp2 HG02809.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0003 a0002c0004t0006 a0002c0004t0003 a0002c0004t0006	a0002c0004t0003g0012 a0002c0004t0003g0028 a0002c0004t0003g0031 others(4): Show a0002c0004t0003g0012 a0002c0004t0003g0028 a0002c0004t0003g0031 a0002c0004t0003g0032 a0002c0004t0003g0033 a0002c0004t0003g0034 a0002c0004t0006g0030	7	158	0.0443	-16	c.322 others(35): Show c.3221-3650_3221-3635delTCTATCTATCTATCTA	CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	28/30		INFO_REALIGN_3_PRIME	chr8	TogoVar
CSRNP2_chr12_51056205_51088596	51080127	AGCAGGCA others(9): Show AGCAGGCAGGCAGGCAG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01891.hp1 HG02055.hp2 others(11): Show HG00438.hp2 HG01891.hp1 HG02055.hp2 HG02258.hp2 HG02486.hp1 HG02647.hp2 HG02809.hp1 HG02922.hp1 HG03471.hp1 HG06807.hp2 NA18946.hp1 NA18986.hp2 NA19005.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0017 a0001c0001t0001g0100 a0001c0001t0001g0210 others(7): Show a0001c0001t0001g0017 a0001c0001t0001g0100 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0002g0108 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0177 a0001c0001t0005g0016 a0001c0001t0005g0209	14	420	0.0333	-16	c.-87 others(33): Show c.-87+3196_-87+3211delCTGCCTGCCTGCCTGC	CSRNP2	ENSG00000110925.7	transcript	ENST00000228515.6	protein_coding	1/4			chr12	TogoVar
CSRNP3_chr2_165464698_165694407	165599279	GAGAGAGA others(9): Show GAGAGAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00741.hp2 others(36): Show HG00140.hp2 HG00280.hp2 HG00741.hp2 HG01081.hp2 HG01106.hp2 HG01255.hp1 HG01257.hp1 HG01258.hp2 HG01358.hp1 HG01433.hp2 HG01884.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp2 HG02056.hp1 HG02071.hp2 HG02148.hp1 HG02148.hp2 HG03017.hp1 HG03490.hp2 HG03669.hp1 HG03927.hp2 NA18942.hp1 NA18956.hp1 NA18961.hp2 NA18966.hp1 NA18972.hp2 NA18974.hp2 NA18983.hp1 NA18985.hp2 NA18992.hp2 NA18999.hp2 NA19003.hp1 NA19009.hp1 NA19010.hp2 NA19075.hp2 NA19082.hp1 NA19085.hp2 NA19087.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0008c0006	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(16): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0011 a0001c0001t0057 a0001c0001t0059 a0001c0001t0060 a0001c0001t0065 a0001c0001t0071 a0001c0002t0001 a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0019 a0001c0002t0039 a0001c0002t0040 a0001c0002t0045 a0001c0004t0089 a0008c0006t0062	a0001c0001t0002g0007 a0001c0001t0002g0016 a0001c0001t0002g0023 others(36): Show a0001c0001t0002g0007 a0001c0001t0002g0016 a0001c0001t0002g0023 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0002g0091 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0134 a0001c0001t0003g0002 a0001c0001t0003g0012 a0001c0001t0004g0025 a0001c0001t0011g0115 a0001c0001t0011g0139 a0001c0001t0057g0028 a0001c0001t0059g0031 a0001c0001t0060g0004 a0001c0001t0065g0013 a0001c0001t0071g0152 a0001c0002t0001g0024 a0001c0002t0001g0178 a0001c0002t0005g0027 a0001c0002t0005g0029 a0001c0002t0005g0030 a0001c0002t0005g0036 a0001c0002t0005g0042 a0001c0002t0006g0038 a0001c0002t0006g0039 a0001c0002t0006g0040 a0001c0002t0006g0041 a0001c0002t0006g0070 a0001c0002t0006g0104 a0001c0002t0008g0044 a0001c0002t0019g0018 a0001c0002t0039g0037 a0001c0002t0040g0142 a0001c0002t0045g0043 a0001c0004t0089g0020 a0008c0006t0062g0107	39	246	0.1585	-16	c.148 others(33): Show c.148+4070_148+4085delGAGAAAGAAAGAAAGA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165642103	AACACACA others(9): Show AACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG03225.hp2 HG01496.hp2 HG03225.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0236 a0001c0002t0014g0238 a0001c0002t0014g0236 a0001c0002t0014g0238	2	246	0.0081	-16	c.149 others(35): Show c.149-15629_149-15614delACACACACACACACAC	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165678286	TGCTTGTT others(9): Show TGCTTGTTTAAAATCAG	T T	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0222 a0001c0002t0001g0222	1	246	0.0041	-16	c.706 others(31): Show c.706-412_706-397delTTGTTTAAAATCAGGC	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRP2_chr12_76853709_76884019	76869529	AACACACA others(9): Show AACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG03453.hp1 HG01891.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0356 a0001c0001t0001g0357 a0001c0001t0001g0356 a0001c0001t0001g0357	2	388	0.0052	-16	c.-1- others(31): Show c.-1-3284_-1-3269delGTGTGTGTGTGTGTGT	CSRP2	ENSG00000175183.10	transcript	ENST00000311083.10	protein_coding	1/5			chr12	TogoVar
CSRP3_chr11_19177030_19206983	19197337	TCTCCCTC others(9): Show TCTCCCTCCCTCCCTCC	T T	intron_variant intron_variant	MODIFIER	HG03704.hp1 NA18973.hp1 NA19091.hp2 HG03704.hp1 NA18973.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0324 a0001c0001t0001g0359 a0001c0001t0001g0124 a0001c0001t0001g0324 a0001c0001t0001g0359	3	416	0.0072	-16	c.-29 others(33): Show c.-29+4601_-29+4616delGGAGGGAGGGAGGGAG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197376	CCCTCCCT others(9): Show CCCTCCCTCCCTCCCTT	C C	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18962.hp2 NA18978.hp2 NA18953.hp2 NA18962.hp2 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0355 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0355	3	416	0.0072	-16	c.-29 others(33): Show c.-29+4562_-29+4577delAAGGGAGGGAGGGAGG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197384	CCCTCCCT others(9): Show CCCTCCCTTCCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 NA18906.hp1 HG02572.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0259 a0001c0001t0001g0261 a0001c0001t0001g0259 a0001c0001t0001g0261	2	416	0.0048	-16	c.-29 others(33): Show c.-29+4554_-29+4569delAAGGAAGGAAGGGAGG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197501	CTCTTTCT others(9): Show CTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG03942.hp1 HG00621.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0357 a0001c0001t0001g0213 a0001c0001t0001g0357	2	416	0.0048	-16	c.-29 others(33): Show c.-29+4437_-29+4452delAAGAAAGAAAGAAAGA	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CST11_chr20_23445412_23457876	23445419	ATTTTTTA others(9): Show ATTTTTTAAAACACTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp2 HG02647.hp1 HG02615.hp2 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	2	446	0.0045	-16	c.50 others(27): Show c.5071_*5086delAAAGTGTTTTAAAAAA	CST11	ENSG00000125831.10	transcript	ENST00000377009.8	protein_coding		4992		chr20	TogoVar
CST3_chr20_23628657_23642955	23631328	CCTCAGTC others(9): Show CCTCAGTCCCATCAATG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	420	0.0024	-16	c.25 others(27): Show c.2572_*2587delCATTGATGGGACTGAG	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding		2328		chr20	TogoVar
CST8_chr20_23486117_23501010	23490971	AGCTGTTT others(9): Show AGCTGTTTAGACCAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0040	1	440	0.0023	-16	c.-51 others(25): Show c.-514_-499delGCTGTTTAGACCAAAG	CST8	ENSG00000125815.9	transcript	ENST00000246012.2	protein_coding		145		chr20	TogoVar
CST9L_chr20_23559732_23573484	23560825	GTTATAGT others(9): Show GTTATAGTATTAGAGTA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0028 a0002c0002t0001g0028	1	392	0.0026	-16	c.41 others(27): Show c.4107_*4122delTACTCTAATACTATAA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3906		chr20	TogoVar
CST9L_chr20_23559732_23573484	23561008	CTTCCTTC others(9): Show CTTCCTTCCTTCCTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0009 a0001c0003t0001g0009	1	392	0.0026	-16	c.39 others(27): Show c.3924_*3939delAGAAGGAAGGAAGGAA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3723		chr20	TogoVar
CST9L_chr20_23559732_23573484	23561016	CTTCCTTC others(9): Show CTTCCTTCTTTCCTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 NA18970.hp2 NA19030.hp1 HG02451.hp2 NA18970.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0002 a0001c0001t0001g0003	3	392	0.0077	-16	c.39 others(27): Show c.3916_*3931delAGAAGGAAAGAAGGAA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3715		chr20	TogoVar
CST9L_chr20_23559732_23573484	23561092	CTTCTTTC others(9): Show CTTCTTTCTTTCTTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	392	0.0026	-16	c.38 others(27): Show c.3840_*3855delAGAAAGAAAGAAAGAA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3639		chr20	TogoVar
CST9L_chr20_23559732_23573484	23573092	CTAGATAA others(9): Show CTAGATAAAGGTTTGCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	392	0.0026	-16	c.-46 others(27): Show c.-4658_-4643delAGCAAACCTTTATCTA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		4609		chr20	TogoVar
CSTA_chr3_122320248_122346969	122331129	ACACACAC others(9): Show ACACACACACACACACT	A A	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03492.hp1 HG03710.hp1 HG03491.hp2 HG03492.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0212 a0001c0001t0001g0043 a0001c0001t0001g0212	3	378	0.0079	-16	c.66+ others(31): Show c.66+5773_66+5788delACACACACACACACTC	CSTA	ENSG00000121552.4	transcript	ENST00000264474.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSTA_chr3_122320248_122346969	122333540	GAAGAAAG others(9): Show GAAGAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01433.hp2 HG02735.hp2 others(5): Show HG01361.hp2 HG01433.hp2 HG02735.hp2 HG03017.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0085 a0001c0002t0001g0082 a0001c0002t0001g0083 others(5): Show a0001c0001t0001g0085 a0001c0002t0001g0082 a0001c0002t0001g0083 a0001c0002t0001g0108 a0001c0002t0001g0114 a0001c0002t0001g0117 a0001c0002t0001g0124 a0001c0002t0001g0142	8	378	0.0212	-16	c.67- others(31): Show c.67-3969_67-3954delAGAAAGAAAGAAAGAA	CSTA	ENSG00000121552.4	transcript	ENST00000264474.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSTF3_chr11_33079584_33166480	33163876	AATATATA others(9): Show AATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG01943.hp2 HG02922.hp1 others(1): Show HG00099.hp2 HG01943.hp2 HG02922.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0254 a0001c0001t0001g0282 a0001c0001t0001g0283 others(1): Show a0001c0001t0001g0254 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0289	4	360	0.0111	-16	c.-25 others(27): Show c.-2567_-2552delATATATATATATATAT	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2397		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163911	ATATATAT others(9): Show ATATATATATATATATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0263 a0001c0001t0001g0263	1	360	0.0028	-16	c.-26 others(27): Show c.-2602_-2587delAATATATATATATATA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2432		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163913	ATATATAT others(9): Show ATATATATATATATTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0260 a0001c0001t0001g0260	1	360	0.0028	-16	c.-26 others(27): Show c.-2604_-2589delAAAATATATATATATA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2434		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163925	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG01361.hp2 NA18967.hp2 HG01256.hp1 HG01361.hp2 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0026 a0001c0001t0002g0034 a0001c0001t0002g0159 a0001c0001t0002g0026 a0001c0001t0002g0034 a0001c0001t0002g0159	3	360	0.0083	-16	c.-26 others(27): Show c.-2616_-2601delAAAAAAAAAAAAAAAA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2446		chr11	TogoVar
CSTL1_chr20_23434685_23449930	23445419	ATTTTTTA others(9): Show ATTTTTTAAAACACTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp1 HG02647.hp2 HG02615.hp1 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	2	452	0.0044	-16	c.54 others(25): Show c.542_*557delTTTTTTAAAACACTTT	CSTL1	ENSG00000125823.13	transcript	ENST00000347397.5	protein_coding		490		chr20	TogoVar
CSTPP1_chr11_46931761_47167247	47052583	CTCTCTCT others(9): Show CTCTCTCTCTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0111 a0001c0004t0001g0111	1	224	0.0045	-16	c.280 others(29): Show c.280+79_280+94delCTTTCTCTCTCTCTTT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47138979	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0128 a0001c0001t0001g0128	1	224	0.0045	-16	c.365 others(33): Show c.365+1268_365+1283delAAAAAAAAAAAAAAAA	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CS_chr12_56266699_56305330	56295951	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0126 a0001c0003t0001g0126	1	316	0.0032	-16	c.42+ others(31): Show c.42+4193_42+4208delTTTTTTTTTTTTTTTT	CS	ENSG00000062485.19	transcript	ENST00000351328.8	protein_coding	1/10			chr12	TogoVar
CTAGE6_chr7_143750089_143762696	143751028	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	190	0.0053	-16	c.42 others(27): Show c.4281_*4296delTTTTTTTTTTTTTTTT	CTAGE6	ENSG00000271321.1	transcript	ENST00000470691.2	protein_coding		4060		chr7	TogoVar
CTBP1_chr4_1206445_1254130	1248860	ACCCGCCC others(9): Show ACCCGCCCCGCCCCGCC	A A	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0350 a0001c0001t0001g0350	1	422	0.0024	-16	c.-18 others(31): Show c.-189+40_-189+55delGGCGGGGCGGGGCGGG	CTBP1	ENSG00000159692.18	transcript	ENST00000382952.8	protein_coding	1/9			chr4	TogoVar
CTBP2_chr10_124979317_125033071	124986281	GCGCGCGC others(9): Show GCGCGCGCGCGCACACA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02109.hp2 NA19062.hp1 HG02109.hp2 NA19062.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0024 a0001c0001 a0005c0024	a0001c0001t0060 a0005c0024t0067 a0001c0001t0060 a0005c0024t0067	a0001c0001t0060g0119 a0005c0024t0067g0033 a0001c0001t0060g0119 a0005c0024t0067g0033	2	380	0.0053	-16	c.32 others(27): Show c.3221_*3236delTGTGTGCGCGCGCGCG	CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding	9/9	3221		chr10	TogoVar
CTBP2_chr10_124979317_125033071	124999367	AAGATTGG others(9): Show AAGATTGGGGTGGGGAC	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0018 a0002c0002t0018	a0002c0002t0018g0178 a0002c0002t0018g0178	1	380	0.0026	-16	c.197 others(35): Show c.1979-1213_1979-1198delGTCCCCACCCCAATCT	CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding	3/8			chr10	TogoVar
CTBP2_chr10_124979317_125033071	125018553	CAACAAAC others(9): Show CAACAAACAAACAAACA	C C	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0049 a0003c0004t0049	a0003c0004t0049g0230 a0003c0004t0049g0230	1	380	0.0026	-16	c.167 others(35): Show c.1678+7513_1678+7528delTGTTTGTTTGTTTGTT	CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding	1/8			chr10	TogoVar
CTBP2_chr10_124979317_125033071	125031021	AGCGCTTC others(9): Show AGCGCTTCCCTAGGGAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00280.hp2 others(150): Show HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp2 HG00642.hp2 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp2 HG01243.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01361.hp2 HG01891.hp2 HG01928.hp2 HG01981.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp2 HG02683.hp1 HG02698.hp2 HG02723.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03490.hp1 HG03490.hp2 HG03654.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04228.hp1 HG06807.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp2 NA18952.hp2 NA18959.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18994.hp2 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19030.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19074.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19083.hp1 NA19088.hp2 NA19090.hp1 NA19091.hp2 NA20129.hp1 NA20752.hp1 NA20752.hp2 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(7): Show a0001 a0002 a0004 a0005 a0009 a0015 a0016 a0020 a0023 a0026	a0001c0001 a0001c0009 a0001c0027 others(15): Show a0001c0001 a0001c0009 a0001c0027 a0001c0032 a0001c0033 a0001c0036 a0002c0002 a0002c0026 a0004c0003 a0004c0029 a0005c0006 a0005c0024 a0009c0014 a0015c0046 a0016c0021 a0020c0031 a0023c0023 a0026c0020	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(55): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0019 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0055 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0066 a0001c0001t0070 a0001c0001t0071 a0001c0001t0072 a0001c0001t0075 a0001c0001t0076 a0001c0001t0077 a0001c0001t0078 a0001c0009t0011 a0001c0009t0068 a0001c0027t0023 a0001c0032t0008 a0001c0033t0069 a0001c0036t0073 a0002c0002t0002 a0002c0002t0028 a0002c0002t0032 a0002c0002t0098 a0002c0026t0028 a0004c0003t0074 a0004c0029t0097 a0005c0006t0001 a0005c0006t0003 a0005c0006t0008 a0005c0006t0034 a0005c0006t0036 a0005c0006t0056 a0005c0006t0079 a0005c0024t0067 a0009c0014t0008 a0009c0014t0035 a0015c0046t0009 a0016c0021t0001 a0020c0031t0001 a0023c0023t0001 a0026c0020t0001	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 others(141): Show a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0061 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0135 a0001c0001t0001g0139 a0001c0001t0003g0013 a0001c0001t0003g0054 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0071 a0001c0001t0003g0073 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0078 a0001c0001t0003g0094 a0001c0001t0003g0096 a0001c0001t0003g0110 a0001c0001t0003g0114 a0001c0001t0003g0117 a0001c0001t0003g0120 a0001c0001t0003g0133 a0001c0001t0003g0140 a0001c0001t0008g0055 a0001c0001t0008g0118 a0001c0001t0008g0141 a0001c0001t0008g0143 a0001c0001t0009g0052 a0001c0001t0009g0056 a0001c0001t0009g0058 a0001c0001t0009g0059 a0001c0001t0009g0060 a0001c0001t0009g0127 a0001c0001t0009g0142 a0001c0001t0012g0009 a0001c0001t0012g0010 a0001c0001t0012g0080 a0001c0001t0012g0137 a0001c0001t0019g0090 a0001c0001t0019g0097 a0001c0001t0019g0125 a0001c0001t0019g0145 a0001c0001t0023g0086 a0001c0001t0023g0088 a0001c0001t0024g0102 a0001c0001t0024g0112 a0001c0001t0024g0136 a0001c0001t0025g0057 a0001c0001t0025g0095 a0001c0001t0025g0131 a0001c0001t0034g0072 a0001c0001t0036g0107 a0001c0001t0037g0087 a0001c0001t0037g0126 a0001c0001t0055g0105 a0001c0001t0057g0113 a0001c0001t0058g0064 a0001c0001t0059g0068 a0001c0001t0060g0119 a0001c0001t0061g0089 a0001c0001t0062g0074 a0001c0001t0063g0123 a0001c0001t0064g0053 a0001c0001t0065g0081 a0001c0001t0066g0144 a0001c0001t0070g0147 a0001c0001t0071g0149 a0001c0001t0072g0051 a0001c0001t0075g0138 a0001c0001t0076g0124 a0001c0001t0077g0134 a0001c0001t0078g0085 a0001c0009t0011g0008 a0001c0009t0011g0065 a0001c0009t0011g0066 a0001c0009t0011g0067 a0001c0009t0011g0148 a0001c0009t0068g0146 a0001c0027t0023g0049 a0001c0032t0008g0100 a0001c0033t0069g0150 a0001c0036t0073g0152 a0002c0002t0002g0217 a0002c0002t0002g0218 a0002c0002t0002g0220 a0002c0002t0028g0219 a0002c0002t0032g0222 a0002c0002t0032g0223 a0002c0002t0098g0225 a0002c0026t0028g0224 a0004c0003t0074g0151 a0004c0029t0097g0260 a0005c0006t0001g0006 a0005c0006t0001g0034 a0005c0006t0001g0036 a0005c0006t0001g0039 a0005c0006t0001g0040 a0005c0006t0001g0041 a0005c0006t0001g0043 a0005c0006t0003g0007 a0005c0006t0003g0037 a0005c0006t0003g0047 a0005c0006t0008g0044 a0005c0006t0008g0045 a0005c0006t0034g0038 a0005c0006t0036g0046 a0005c0006t0056g0042 a0005c0006t0079g0035 a0005c0024t0067g0033 a0009c0014t0008g0029 a0009c0014t0035g0027 a0009c0014t0035g0028 a0015c0046t0009g0153 a0016c0021t0001g0031 a0020c0031t0001g0050 a0023c0023t0001g0032 a0026c0020t0001g0030	153	380	0.4026	-16	c.-32 others(27): Show c.-3278_-3263delCTCCCTAGGGAAGCGC	CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding		2951		chr10	TogoVar
CTBS_chr1_84544611_84579440	84548750	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0006 a0006	a0006c0011 a0006c0011	a0006c0011t0002 a0006c0011t0002	a0006c0011t0002g0130 a0006c0011t0002g0130	1	340	0.0029	-16	c.62 others(27): Show c.6233_*6248delAAAAAAAAAAAAAAAA	CTBS	ENSG00000117151.13	transcript	ENST00000370630.6	protein_coding		860		chr1	TogoVar
CTBS_chr1_84544611_84579440	84560097	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0136 a0003c0004t0002g0136	1	340	0.0029	-16	c.957 others(33): Show c.957+3144_957+3159delCTTTCTTTCTTTCTTT	CTBS	ENSG00000117151.13	transcript	ENST00000370630.6	protein_coding	6/6			chr1	TogoVar
CTC1_chr17_8219815_8253056	8237665	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01257.hp1 HG01515.hp2 others(6): Show HG01243.hp2 HG01257.hp1 HG01515.hp2 HG02735.hp2 HG03471.hp2 NA18522.hp1 NA18946.hp2 NA18977.hp2 NA19081.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0002 a0001c0003 a0002c0001 others(3): Show a0001c0002 a0001c0003 a0002c0001 a0003c0004 a0003c0005 a0007c0011	a0001c0002t0010 a0001c0003t0016 a0002c0001t0001 others(4): Show a0001c0002t0010 a0001c0003t0016 a0002c0001t0001 a0002c0001t0006 a0003c0004t0001 a0003c0005t0002 a0007c0011t0001	a0001c0002t0010g0211 a0001c0003t0016g0102 a0002c0001t0001g0225 others(6): Show a0001c0002t0010g0211 a0001c0003t0016g0102 a0002c0001t0001g0225 a0002c0001t0001g0310 a0002c0001t0006g0235 a0002c0001t0006g0246 a0003c0004t0001g0316 a0003c0005t0002g0064 a0007c0011t0001g0107	9	402	0.0224	-16	c.648 others(31): Show c.648-162_648-147delTTTTTTTTTTTTTTTT	CTC1	ENSG00000178971.17	transcript	ENST00000651323.1	protein_coding	4/22			chr17	TogoVar
CTC1_chr17_8219815_8253056	8246965	CTTATTTA others(9): Show CTTATTTATTTATTTAT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0308 a0001c0002t0003g0308	1	402	0.0025	-16	c.33+ others(31): Show c.33+1023_33+1038delATAAATAAATAAATAA	CTC1	ENSG00000178971.17	transcript	ENST00000651323.1	protein_coding	1/22			chr17	TogoVar
CTCFL_chr20_57492166_57530140	57494161	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01346.hp2 HG02698.hp2 HG01346.hp2 HG02698.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0189 a0002c0002t0002g0200 a0002c0002t0002g0189 a0002c0002t0002g0200	2	424	0.0047	-16	c.43 others(27): Show c.4373_*4388delCACACACACACACACA	CTCFL	ENSG00000124092.13	transcript	ENST00000243914.8	protein_coding		3004		chr20	TogoVar
CTCFL_chr20_57492166_57530140	57494197	GTGTGTGT others(9): Show GTGTGTGTGTGTGTATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG03139.hp2 HG02109.hp2 HG03139.hp2	a0005 a0005	a0005c0015 a0005c0015	a0005c0015t0003 a0005c0015t0003	a0005c0015t0003g0242 a0005c0015t0003g0243 a0005c0015t0003g0242 a0005c0015t0003g0243	2	424	0.0047	-16	c.43 others(27): Show c.4337_*4352delTATACACACACACACA	CTCFL	ENSG00000124092.13	transcript	ENST00000243914.8	protein_coding		2968		chr20	TogoVar
CTCFL_chr20_57492166_57530140	57494199	GTGTGTGT others(9): Show GTGTGTGTGTGTATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp1 HG03453.hp1 HG03540.hp2 others(1): Show HG01175.hp1 HG03453.hp1 HG03540.hp2 HG03579.hp1	a0005 a0010 a0005 a0010	a0005c0012 a0010c0017 a0010c0021 a0005c0012 a0010c0017 a0010c0021	a0005c0012t0003 a0010c0017t0003 a0010c0021t0003 a0005c0012t0003 a0010c0017t0003 a0010c0021t0003	a0005c0012t0003g0069 a0005c0012t0003g0072 a0010c0017t0003g0215 others(1): Show a0005c0012t0003g0069 a0005c0012t0003g0072 a0010c0017t0003g0215 a0010c0021t0003g0204	4	424	0.0094	-16	c.43 others(27): Show c.4335_*4350delTATATACACACACACA	CTCFL	ENSG00000124092.13	transcript	ENST00000243914.8	protein_coding		2966		chr20	TogoVar
CTCFL_chr20_57492166_57530140	57519976	ATGGAGAT others(9): Show ATGGAGATAGTGGCCAC	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00735.hp1 HG01175.hp1 others(6): Show HG00323.hp1 HG00735.hp1 HG01175.hp1 HG01256.hp2 HG01258.hp2 HG01516.hp2 HG01517.hp1 HG03540.hp2 HG03579.hp1	a0005 a0006 a0010 others(1): Show a0005 a0006 a0010 a0018	a0005c0012 a0006c0007 a0010c0017 others(1): Show a0005c0012 a0006c0007 a0010c0017 a0018c0018	a0005c0012t0003 a0006c0007t0001 a0010c0017t0003 others(1): Show a0005c0012t0003 a0006c0007t0001 a0010c0017t0003 a0018c0018t0002	a0005c0012t0003g0069 a0005c0012t0003g0072 a0006c0007t0001g0049 others(5): Show a0005c0012t0003g0069 a0005c0012t0003g0072 a0006c0007t0001g0049 a0006c0007t0001g0263 a0006c0007t0001g0264 a0006c0007t0001g0265 a0010c0017t0003g0215 a0018c0018t0002g0211	9	424	0.0212	-16	c.755 others(31): Show c.755-615_755-600delGTGGCCACTATCTCCA	CTCFL	ENSG00000124092.13	transcript	ENST00000243914.8	protein_coding	3/10			chr20	TogoVar
CTCF_chr16_67557526_67644177	67601294	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0072 a0001c0001t0001g0072	1	168	0.0060	-16	c.-9- others(31): Show c.-9-9501_-9-9486delGTGTGTGTGTGTGTGT	CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
CTCF_chr16_67557526_67644177	67604736	TTTTTTTT others(9): Show TTTTTTTTTGTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0136 a0001c0001t0003g0136	1	168	0.0060	-16	c.-9- others(31): Show c.-9-6079_-9-6064delGTTTTTTGTTTTTTTT	CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr16	TogoVar

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