Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ADRA1D_chr20_4215630_4254287	4227704	CTCCTTCC others(9): Show CTCCTTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0004 a0002c0004t0004	a0002c0004t0004g0388 a0002c0004t0004g0388	1	452	0.0022	-16	c.111 others(35): Show c.1112-5590_1112-5575delAGGAAGGAAGGAAGGA	ADRA1D	ENSG00000171873.8	transcript	ENST00000379453.6	protein_coding	1/1			chr20	TogoVar
ADSS2_chr1_244403494_244456909	244435587	CCTCCACC others(9): Show CCTCCACCTCTGTCCTT	C C	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0169 a0001c0001t0002g0169	1	408	0.0025	-16	c.355 others(33): Show c.355+1222_355+1237delAAGGACAGAGGTGGAG	ADSS2	ENSG00000035687.10	transcript	ENST00000366535.4	protein_coding	3/12			chr1	TogoVar
ADTRP_chr6_11708523_11783803	11727963	GAGGGAGG others(9): Show GAGGGAGGGAGGTAGGT	G G	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0135 a0002c0002t0003g0135	1	410	0.0024	-16	c.507 others(33): Show c.507-4479_507-4464delACCTACCTCCCTCCCT	ADTRP	ENSG00000111863.13	transcript	ENST00000414691.8	protein_coding	4/5			chr6	TogoVar
AFAP1L1_chr5_149266859_149348637	149291535	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03540.hp1 HG03486.hp1 HG03540.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0002 a0004c0004t0003 a0001c0001t0002 a0004c0004t0003	a0001c0001t0002g0052 a0004c0004t0003g0019 a0001c0001t0002g0052 a0004c0004t0003g0019	2	286	0.0070	-16	c.17- others(31): Show c.17-7970_17-7955delAAAAAAAAAAAAGAAA	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
AFAP1L1_chr5_149266859_149348637	149346715	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00597.hp1 HG01175.hp2 others(4): Show HG00438.hp2 HG00597.hp1 HG01175.hp2 HG01261.hp2 HG01346.hp1 HG02572.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0022 a0001c0001t0001g0055 a0001c0001t0003g0016 others(4): Show a0001c0001t0001g0022 a0001c0001t0001g0055 a0001c0001t0003g0016 a0001c0001t0003g0039 a0001c0001t0003g0062 a0001c0001t0003g0096 a0001c0001t0003g0203	7	286	0.0245	-16	c.66 others(27): Show c.6686_*6701delTTTTTTTTTTTTTTTT	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding		3079		chr5	TogoVar
AFAP1L2_chr10_114289824_114409502	114312234	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp2 HG00558.hp2 others(58): Show HG00408.hp2 HG00438.hp2 HG00558.hp2 HG01106.hp1 HG01109.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02559.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02723.hp2 HG02895.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp2 HG04184.hp2 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18941.hp2 NA18952.hp1 NA18969.hp2 NA18970.hp2 NA18972.hp2 NA18979.hp1 NA19000.hp1 NA19004.hp2 NA19005.hp1 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19068.hp1 NA19081.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20905.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0012	a0001c0001 a0001c0002 a0001c0003 others(12): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0011 a0001c0023 a0001c0030 a0002c0005 a0002c0006 a0002c0015 a0002c0031 a0003c0007 a0003c0026 a0004c0009 a0012c0034	a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 others(20): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 a0001c0002t0005 a0001c0002t0010 a0001c0002t0011 a0001c0003t0002 a0001c0004t0001 a0001c0004t0008 a0001c0004t0014 a0001c0011t0001 a0001c0023t0005 a0001c0030t0002 a0002c0005t0003 a0002c0005t0005 a0002c0006t0007 a0002c0006t0021 a0002c0015t0019 a0002c0031t0020 a0003c0007t0006 a0003c0026t0015 a0004c0009t0009 a0012c0034t0004	a0001c0001t0001g0109 a0001c0001t0001g0149 a0001c0001t0004g0082 others(58): Show a0001c0001t0001g0109 a0001c0001t0001g0149 a0001c0001t0004g0082 a0001c0002t0002g0030 a0001c0002t0002g0044 a0001c0002t0002g0078 a0001c0002t0002g0084 a0001c0002t0002g0085 a0001c0002t0002g0098 a0001c0002t0002g0099 a0001c0002t0002g0112 a0001c0002t0002g0159 a0001c0002t0002g0183 a0001c0002t0002g0190 a0001c0002t0002g0199 a0001c0002t0002g0204 a0001c0002t0002g0228 a0001c0002t0002g0255 a0001c0002t0005g0208 a0001c0002t0005g0238 a0001c0002t0010g0027 a0001c0002t0010g0036 a0001c0002t0011g0213 a0001c0003t0002g0045 a0001c0003t0002g0092 a0001c0003t0002g0144 a0001c0003t0002g0165 a0001c0003t0002g0262 a0001c0004t0001g0004 a0001c0004t0001g0133 a0001c0004t0001g0181 a0001c0004t0001g0237 a0001c0004t0001g0245 a0001c0004t0008g0052 a0001c0004t0008g0056 a0001c0004t0008g0215 a0001c0004t0014g0015 a0001c0011t0001g0126 a0001c0023t0005g0010 a0001c0030t0002g0100 a0002c0005t0003g0023 a0002c0005t0005g0125 a0002c0005t0005g0156 a0002c0005t0005g0249 a0002c0006t0007g0017 a0002c0006t0007g0033 a0002c0006t0007g0167 a0002c0006t0007g0168 a0002c0006t0007g0195 a0002c0006t0021g0205 a0002c0015t0019g0247 a0002c0031t0020g0024 a0003c0007t0006g0025 a0003c0007t0006g0110 a0003c0007t0006g0151 a0003c0007t0006g0193 a0003c0007t0006g0207 a0003c0007t0006g0250 a0003c0026t0015g0157 a0004c0009t0009g0009 a0012c0034t0004g0244	61	262	0.2328	-16	c.792 others(33): Show c.792+1621_792+1636delACACACACACACACAC	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	7/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114360493	ATAGATAG others(9): Show ATAGATAGATAGATAGT	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0085 a0001c0002t0002g0085	1	262	0.0038	-16	c.17- others(33): Show c.17-19778_17-19763delACTATCTATCTATCTA	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	1/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114368767	AACACACA others(9): Show AACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19043.hp1 HG02145.hp1 NA19043.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0007 a0001c0002 a0003c0007	a0001c0002t0003 a0003c0007t0006 a0001c0002t0003 a0003c0007t0006	a0001c0002t0003g0185 a0003c0007t0006g0151 a0001c0002t0003g0185 a0003c0007t0006g0151	2	262	0.0076	-16	c.17- others(33): Show c.17-28052_17-28037delGTGTGTGTGTGTGTGT	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	1/18			chr10	TogoVar
AFDN_chr6_167821911_167977023	167957756	GTGGCTGC others(9): Show GTGGCTGCAGCTTTGCC	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00408.hp1 others(103): Show HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00558.hp2 HG00597.hp2 HG00639.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG01074.hp1 HG01123.hp1 HG01192.hp1 HG01258.hp1 HG01261.hp2 HG01346.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01884.hp2 HG01934.hp2 HG01975.hp2 HG01993.hp1 HG02027.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02273.hp1 HG02451.hp1 HG02523.hp1 HG02602.hp1 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02735.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02976.hp2 HG03017.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03490.hp1 HG03516.hp1 HG03579.hp2 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04204.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18941.hp1 NA18943.hp1 NA18944.hp2 NA18947.hp1 NA18950.hp1 NA18953.hp2 NA18954.hp1 NA18961.hp1 NA18964.hp1 NA18968.hp1 NA18972.hp1 NA18975.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18985.hp1 NA18986.hp2 NA18987.hp2 NA18992.hp1 NA18995.hp1 NA19004.hp1 NA19005.hp2 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19056.hp2 NA19058.hp1 NA19060.hp2 NA19064.hp1 NA19066.hp2 NA19067.hp2 NA19072.hp2 NA19074.hp2 NA19075.hp2 NA19079.hp1 NA19083.hp1 NA19084.hp1 NA19085.hp1 NA20300.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0009 others(2): Show a0001 a0002 a0009 a0012 a0014	a0001c0001 a0001c0003 a0001c0005 others(11): Show a0001c0001 a0001c0003 a0001c0005 a0001c0007 a0001c0012 a0001c0024 a0001c0031 a0001c0032 a0002c0014 a0002c0022 a0002c0030 a0009c0019 a0012c0023 a0014c0015	a0001c0001t0003 a0001c0003t0001 a0001c0003t0021 others(14): Show a0001c0001t0003 a0001c0003t0001 a0001c0003t0021 a0001c0005t0001 a0001c0005t0008 a0001c0005t0015 a0001c0007t0001 a0001c0012t0003 a0001c0024t0001 a0001c0031t0001 a0001c0032t0001 a0002c0014t0001 a0002c0022t0001 a0002c0030t0001 a0009c0019t0003 a0012c0023t0011 a0014c0015t0001	a0001c0001t0003g0282 a0001c0001t0003g0283 a0001c0003t0001g0007 others(102): Show a0001c0001t0003g0282 a0001c0001t0003g0283 a0001c0003t0001g0007 a0001c0003t0001g0008 a0001c0003t0001g0009 a0001c0003t0001g0010 a0001c0003t0001g0011 a0001c0003t0001g0012 a0001c0003t0001g0013 a0001c0003t0001g0014 a0001c0003t0001g0015 a0001c0003t0001g0016 a0001c0003t0001g0017 a0001c0003t0001g0018 a0001c0003t0001g0019 a0001c0003t0001g0021 a0001c0003t0001g0022 a0001c0003t0001g0023 a0001c0003t0001g0024 a0001c0003t0001g0025 a0001c0003t0001g0027 a0001c0003t0001g0028 a0001c0003t0001g0029 a0001c0003t0001g0032 a0001c0003t0001g0035 a0001c0003t0001g0039 a0001c0003t0001g0044 a0001c0003t0001g0045 a0001c0003t0001g0047 a0001c0003t0001g0050 a0001c0003t0001g0051 a0001c0003t0001g0053 a0001c0003t0001g0055 a0001c0003t0001g0057 a0001c0003t0001g0058 a0001c0003t0001g0060 a0001c0003t0001g0061 a0001c0003t0001g0067 a0001c0003t0001g0068 a0001c0003t0001g0069 a0001c0003t0001g0070 a0001c0003t0001g0071 a0001c0003t0001g0073 a0001c0003t0001g0076 a0001c0003t0001g0077 a0001c0003t0001g0078 a0001c0003t0001g0079 a0001c0003t0001g0086 a0001c0003t0001g0087 a0001c0003t0001g0088 a0001c0003t0001g0089 a0001c0003t0001g0090 a0001c0003t0001g0091 a0001c0003t0001g0097 a0001c0003t0001g0105 a0001c0003t0001g0190 a0001c0003t0001g0205 a0001c0003t0001g0271 a0001c0003t0001g0274 a0001c0003t0001g0275 a0001c0003t0021g0062 a0001c0005t0001g0002 a0001c0005t0001g0026 a0001c0005t0001g0041 a0001c0005t0001g0042 a0001c0005t0001g0043 a0001c0005t0001g0048 a0001c0005t0001g0049 a0001c0005t0001g0052 a0001c0005t0001g0054 a0001c0005t0001g0056 a0001c0005t0001g0059 a0001c0005t0001g0063 a0001c0005t0001g0064 a0001c0005t0001g0065 a0001c0005t0001g0066 a0001c0005t0001g0072 a0001c0005t0001g0075 a0001c0005t0001g0080 a0001c0005t0001g0081 a0001c0005t0001g0083 a0001c0005t0001g0084 a0001c0005t0001g0085 a0001c0005t0001g0111 a0001c0005t0001g0189 a0001c0005t0001g0191 a0001c0005t0001g0276 a0001c0005t0001g0310 a0001c0005t0008g0200 a0001c0005t0008g0201 a0001c0005t0015g0074 a0001c0007t0001g0284 a0001c0007t0001g0286 a0001c0012t0003g0279 a0001c0012t0003g0280 a0001c0024t0001g0124 a0001c0031t0001g0046 a0001c0032t0001g0038 a0002c0014t0001g0020 a0002c0014t0001g0037 a0002c0022t0001g0036 a0002c0030t0001g0100 a0009c0019t0003g0281 a0012c0023t0011g0272 a0014c0015t0001g0082	106	326	0.3252	-16	c.483 others(35): Show c.4834-4666_4834-4651delTTTGCCTGGCTGCAGC	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	30/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFDN_chr6_167821911_167977023	167964614	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0013 a0001c0006t0013	a0001c0006t0013g0178 a0001c0006t0013g0178	1	326	0.0031	-16	c.496 others(35): Show c.4969-1111_4969-1096delGTGTGTGTGTGTGTGT	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	31/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFF1_chr4_86930011_87146039	86941651	CATAAATA others(9): Show CATAAATAAATAAATAA	C C	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0017 a0001c0001t0003g0017	1	294	0.0034	-16	c.-37 others(33): Show c.-37+6425_-37+6440delTAAATAAATAAATAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86982848	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0263 a0001c0001t0002g0263	1	294	0.0034	-16	c.38+ others(33): Show c.38+34289_38+34304delAAAAAAAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86985181	CTATATAT others(9): Show CTATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02717.hp1 HG02723.hp2 others(4): Show HG02559.hp1 HG02717.hp1 HG02723.hp2 HG02818.hp2 HG03130.hp2 HG03239.hp1 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0005 a0005c0032 a0001c0001 a0001c0005 a0005c0032	a0001c0001t0001 a0001c0005t0041 a0001c0005t0043 others(3): Show a0001c0001t0001 a0001c0005t0041 a0001c0005t0043 a0001c0005t0052 a0001c0005t0053 a0005c0032t0011	a0001c0001t0001g0147 a0001c0001t0001g0152 a0001c0005t0041g0175 others(4): Show a0001c0001t0001g0147 a0001c0001t0001g0152 a0001c0005t0041g0175 a0001c0005t0043g0173 a0001c0005t0052g0172 a0001c0005t0053g0174 a0005c0032t0011g0103	7	294	0.0238	-16	c.38+ others(33): Show c.38+36629_38+36644delTATATATATATATATA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87000605	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA21309.hp2 HG00558.hp1 NA21309.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0010c0015 a0001c0001 a0010c0015	a0001c0001t0001 a0010c0015t0055 a0001c0001t0001 a0010c0015t0055	a0001c0001t0001g0168 a0010c0015t0055g0012 a0001c0001t0001g0168 a0010c0015t0055g0012	2	294	0.0068	-16	c.39- others(33): Show c.39-45540_39-45525delTGTGTGTGTGTGTGTG	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022578	ATATATCT others(9): Show ATATATCTATCTATATC	A A	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG04204.hp1 NA18964.hp1 others(1): Show HG01978.hp2 HG04204.hp1 NA18964.hp1 NA18970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0018 a0001c0001t0002 a0001c0001t0003 a0001c0001t0018	a0001c0001t0002g0025 a0001c0001t0002g0054 a0001c0001t0003g0061 others(1): Show a0001c0001t0002g0025 a0001c0001t0002g0054 a0001c0001t0003g0061 a0001c0001t0018g0060	4	294	0.0136	-16	c.39- others(33): Show c.39-23584_39-23569delATCTATCTATATCTAT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87073280	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 NA19240.hp2 NA21309.hp2 HG02630.hp1 NA19240.hp2 NA21309.hp2	a0001 a0010 a0018 a0001 a0010 a0018	a0001c0025 a0010c0015 a0018c0013 a0001c0025 a0010c0015 a0018c0013	a0001c0025t0003 a0010c0015t0055 a0018c0013t0070 a0001c0025t0003 a0010c0015t0055 a0018c0013t0070	a0001c0025t0003g0111 a0010c0015t0055g0012 a0018c0013t0070g0010 a0001c0025t0003g0111 a0010c0015t0055g0012 a0018c0013t0070g0010	3	294	0.0102	-16	c.106 others(37): Show c.1060-10821_1060-10806delAAAAAAAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87084550	CAATAAAT others(9): Show CAATAAATAAATAAATA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00673.hp2 HG01167.hp1 others(41): Show HG00323.hp2 HG00673.hp2 HG01167.hp1 HG01361.hp1 HG02015.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02280.hp2 HG02559.hp1 HG02572.hp2 HG02717.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02976.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03540.hp2 HG03704.hp2 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp2 NA18906.hp2 NA18951.hp1 NA18965.hp2 NA18968.hp1 NA18971.hp2 NA18985.hp2 NA18999.hp1 NA19011.hp1 NA19030.hp2 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19077.hp1 NA19083.hp1 NA19087.hp1 NA20905.hp1	a0001 a0002 a0006 others(3): Show a0001 a0002 a0006 a0007 a0008 a0013	a0001c0001 a0001c0005 a0001c0017 others(5): Show a0001c0001 a0001c0005 a0001c0017 a0002c0008 a0006c0031 a0007c0029 a0008c0027 a0013c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0010 a0001c0001t0013 a0001c0005t0041 a0001c0005t0043 a0001c0005t0052 a0001c0005t0053 a0001c0017t0005 a0002c0008t0021 a0002c0008t0042 a0006c0031t0010 a0007c0029t0038 a0008c0027t0003 a0013c0020t0061	a0001c0001t0001g0042 a0001c0001t0001g0270 a0001c0001t0002g0029 others(41): Show a0001c0001t0001g0042 a0001c0001t0001g0270 a0001c0001t0002g0029 a0001c0001t0002g0246 a0001c0001t0003g0017 a0001c0001t0003g0019 a0001c0001t0003g0027 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0044 a0001c0001t0003g0058 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0067 a0001c0001t0003g0079 a0001c0001t0003g0239 a0001c0001t0003g0245 a0001c0001t0003g0271 a0001c0001t0003g0273 a0001c0001t0003g0276 a0001c0001t0003g0288 a0001c0001t0003g0289 a0001c0001t0007g0145 a0001c0001t0007g0269 a0001c0001t0007g0277 a0001c0001t0007g0282 a0001c0001t0007g0284 a0001c0001t0010g0252 a0001c0001t0010g0253 a0001c0001t0010g0254 a0001c0001t0010g0256 a0001c0001t0013g0268 a0001c0005t0041g0175 a0001c0005t0043g0173 a0001c0005t0052g0172 a0001c0005t0053g0174 a0001c0017t0005g0097 a0002c0008t0021g0014 a0002c0008t0021g0016 a0002c0008t0042g0015 a0006c0031t0010g0162 a0007c0029t0038g0001 a0008c0027t0003g0045 a0013c0020t0061g0171	44	294	0.1497	-16	c.110 others(33): Show c.1104+425_1104+440delTAAATAAATAAATAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	5/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87084589	TAAATAAA others(9): Show TAAATAAATAAATAAAA	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01069.hp2 HG01099.hp1 others(5): Show HG00741.hp2 HG01069.hp2 HG01099.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG02109.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0006 others(5): Show a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0011 a0001c0001t0003g0069	8	294	0.0272	-16	c.110 others(33): Show c.1104+428_1104+443delATAAATAAATAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	5/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87138490	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02145.hp1 NA20129.hp2 HG02145.hp1 NA20129.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0022 a0001c0004t0022	a0001c0004t0022g0243 a0001c0004t0022g0251 a0001c0004t0022g0243 a0001c0004t0022g0251	2	294	0.0068	-16	c.28 others(27): Show c.2806_*2821delGTGTGTGTGTGTGTGT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	21/21	2806	INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF2_chrX_148495617_149005663	148849363	TCCTCCCC others(9): Show TCCTCCCCCCCCCCCCC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02451.hp2 HG03486.hp1 HG01891.hp2 HG02451.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0098 a0001c0001t0110 a0001c0001t0046 a0001c0001t0098 a0001c0001t0110	a0001c0001t0046g0165 a0001c0001t0098g0119 a0001c0001t0110g0118 a0001c0001t0046g0165 a0001c0001t0098g0119 a0001c0001t0110g0118	3	169	0.0178	-16	c.126 others(35): Show c.1262+5933_1262+5948delTCCCCCCCCCCCCCCC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	7/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148897257	ATATATAT others(9): Show ATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0026 a0001c0003t0026	a0001c0003t0026g0157 a0001c0003t0026g0157	1	169	0.0059	-16	c.136 others(35): Show c.1360-6958_1360-6943delATATATATATGTATAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	8/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF3_chr2_99540419_100147590	99634964	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0089 a0001c0003t0006g0089	1	100	0.0100	-16	c.118 others(37): Show c.1184+14646_1184+14661delGTGTGTGTGTGTGTGT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99672176	TCTCACAC others(9): Show TCTCACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0018 a0002c0002t0018	a0002c0002t0018g0015 a0002c0002t0018g0015	1	100	0.0100	-16	c.114 others(33): Show c.1143+346_1143+361delTGTGTGTGTGTGTGAG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	12/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99778881	TGTGTGTG others(9): Show TGTGTGTGTGTGTGCGC	T T	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0041 a0001c0001t0004g0041	1	100	0.0100	-16	c.922 others(35): Show c.922-26596_922-26581delGCGCACACACACACAC	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	8/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99947601	AAGATAGA others(9): Show AAGATAGATAGATAGAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0051	1	100	0.0100	-16	c.873 others(35): Show c.873+59015_873+59030delATCTATCTATCTATCT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFMID_chr17_78182362_78212702	78193370	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0350 a0001c0001t0008g0350	1	446	0.0022	-16	c.154 others(33): Show c.154+2323_154+2338delAAAAAAAAAAAAAAAA	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
AFM_chr4_73476745_73509001	73484440	CTCTTTCT others(9): Show CTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01496.hp1 HG02004.hp2 others(5): Show HG00741.hp1 HG01496.hp1 HG02004.hp2 HG02647.hp1 HG02895.hp2 HG02897.hp1 HG03704.hp2 HG04184.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0001c0001t0001 a0001c0001t0003 a0002c0002t0001	a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0181 others(3): Show a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0003g0146 a0002c0002t0001g0016	8	368	0.0217	-16	c.270 others(31): Show c.270+101_270+116delTTTCTTTCTTTCTTTC	AFM	ENSG00000079557.5	transcript	ENST00000226355.5	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFTPH_chr2_64519328_64598005	64545570	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG04184.hp1 HG03017.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0181 a0001c0001t0001g0219 a0001c0001t0001g0181 a0001c0001t0001g0219	2	372	0.0054	-16	c.-32 others(33): Show c.-32-5846_-32-5831delAAAAAAAAAAAAAAAA	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64550677	GCACACAC others(9): Show GCACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00438.hp1 others(75): Show HG00099.hp1 HG00280.hp2 HG00438.hp1 HG00621.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp2 HG01069.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01258.hp2 HG01261.hp1 HG01934.hp1 HG01978.hp2 HG02004.hp2 HG02148.hp1 HG02257.hp2 HG02273.hp2 HG02300.hp2 HG02559.hp2 HG02602.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03017.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03490.hp2 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp2 HG04204.hp2 HG04228.hp1 NA18940.hp2 NA18942.hp1 NA18947.hp1 NA18949.hp1 NA18952.hp1 NA18956.hp1 NA18961.hp1 NA18962.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18977.hp1 NA18978.hp1 NA18979.hp2 NA18981.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18994.hp1 NA18995.hp2 NA19001.hp1 NA19010.hp2 NA19030.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19065.hp1 NA19065.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19081.hp1 NA19081.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0012 a0002c0002 others(2): Show a0001c0001 a0001c0012 a0002c0002 a0003c0003 a0007c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0012t0004 a0002c0002t0002 a0003c0003t0008 a0007c0009t0004	a0001c0001t0001g0095 a0001c0001t0001g0107 a0001c0001t0001g0120 others(74): Show a0001c0001t0001g0095 a0001c0001t0001g0107 a0001c0001t0001g0120 a0001c0001t0002g0021 a0001c0001t0002g0109 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0004g0031 a0001c0001t0004g0037 a0001c0001t0004g0039 a0001c0001t0004g0041 a0001c0001t0004g0044 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0047 a0001c0001t0004g0049 a0001c0001t0004g0050 a0001c0001t0004g0051 a0001c0001t0004g0053 a0001c0001t0004g0061 a0001c0001t0004g0062 a0001c0001t0004g0063 a0001c0001t0004g0064 a0001c0001t0004g0066 a0001c0001t0004g0072 a0001c0001t0004g0074 a0001c0001t0004g0080 a0001c0001t0004g0082 a0001c0001t0004g0092 a0001c0001t0004g0093 a0001c0001t0004g0094 a0001c0001t0004g0097 a0001c0001t0004g0103 a0001c0001t0004g0230 a0001c0001t0004g0276 a0001c0001t0005g0002 a0001c0001t0005g0032 a0001c0001t0005g0035 a0001c0001t0005g0038 a0001c0001t0005g0040 a0001c0001t0005g0054 a0001c0001t0005g0056 a0001c0001t0005g0057 a0001c0001t0005g0058 a0001c0001t0005g0060 a0001c0001t0005g0065 a0001c0001t0005g0067 a0001c0001t0005g0068 a0001c0001t0005g0069 a0001c0001t0005g0070 a0001c0001t0005g0077 a0001c0001t0005g0078 a0001c0001t0005g0079 a0001c0001t0005g0084 a0001c0001t0005g0085 a0001c0001t0005g0086 a0001c0001t0005g0091 a0001c0001t0005g0096 a0001c0001t0005g0105 a0001c0001t0005g0108 a0001c0001t0006g0110 a0001c0001t0011g0034 a0001c0001t0011g0059 a0001c0001t0012g0104 a0001c0012t0004g0073 a0002c0002t0002g0337 a0002c0002t0002g0340 a0002c0002t0002g0341 a0002c0002t0002g0342 a0002c0002t0002g0347 a0002c0002t0002g0348 a0002c0002t0002g0349 a0002c0002t0002g0350 a0002c0002t0002g0362 a0003c0003t0008g0232 a0007c0009t0004g0071	78	372	0.2097	-16	c.-32 others(31): Show c.-32-727_-32-712delCACACACACACACACA	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64576074	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02886.hp1 HG02886.hp2 others(8): Show HG02622.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG03098.hp2 HG03130.hp1 HG03540.hp1 NA18963.hp1 NA18986.hp2 NA19240.hp1 NA20129.hp1	a0002 a0008 a0002 a0008	a0002c0002 a0008c0017 a0002c0002 a0008c0017	a0002c0002t0002 a0002c0002t0003 a0008c0017t0003 a0002c0002t0002 a0002c0002t0003 a0008c0017t0003	a0002c0002t0002g0283 a0002c0002t0002g0284 a0002c0002t0002g0327 others(8): Show a0002c0002t0002g0283 a0002c0002t0002g0284 a0002c0002t0002g0327 a0002c0002t0003g0280 a0002c0002t0003g0287 a0002c0002t0003g0300 a0002c0002t0003g0308 a0002c0002t0003g0320 a0002c0002t0003g0321 a0002c0002t0003g0322 a0008c0017t0003g0326	11	372	0.0296	-16	c.239 others(35): Show c.2394+3035_2394+3050delACACACACACACACAC	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235521738	ATATATGT others(9): Show ATATATGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03098.hp1 HG02717.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0002t0038 a0001c0001t0007 a0001c0002t0038	a0001c0001t0007g0008 a0001c0002t0038g0086 a0001c0001t0007g0008 a0001c0002t0038g0086	2	98	0.0204	-16	c.163 others(35): Show c.163+26891_163+26906delATATGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235573045	CTTCTTCT others(9): Show CTTCTTCTTCTTCTTCT	C C	intron_variant intron_variant	MODIFIER	HG04199.hp2 NA20300.hp2 HG04199.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0017 a0002c0020 a0001c0017 a0002c0020	a0001c0017t0008 a0002c0020t0001 a0001c0017t0008 a0002c0020t0001	a0001c0017t0008g0092 a0002c0020t0001g0022 a0001c0017t0008g0092 a0002c0020t0001g0022	2	98	0.0204	-16	c.163 others(35): Show c.163+78205_163+78220delCTTCTTCTTTCTTCTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235589189	GTTTTGTT others(9): Show GTTTTGTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 NA19011.hp2 HG00438.hp1 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0008 a0001c0006t0001 a0001c0001t0008 a0001c0006t0001	a0001c0001t0008g0069 a0001c0006t0001g0016 a0001c0001t0008g0069 a0001c0006t0001g0016	2	98	0.0204	-16	c.163 others(35): Show c.163+94345_163+94360delGTTTTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235629268	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02109.hp2 HG03516.hp1 others(2): Show HG01106.hp1 HG02109.hp2 HG03516.hp1 NA20300.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0005 a0001c0001t0011 a0001c0001t0044 others(2): Show a0001c0001t0005 a0001c0001t0011 a0001c0001t0044 a0001c0002t0013 a0001c0006t0035	a0001c0001t0005g0007 a0001c0001t0011g0020 a0001c0001t0044g0041 others(2): Show a0001c0001t0005g0007 a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0002t0013g0035 a0001c0006t0035g0044	5	98	0.0510	-16	c.164 others(35): Show c.164-79875_164-79860delGTGTGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235651184	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01496.hp2 HG02109.hp2 others(17): Show HG01358.hp2 HG01496.hp2 HG02109.hp2 HG02145.hp2 HG02647.hp2 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 NA18906.hp1 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0018	a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 others(14): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0019 a0001c0001t0024 a0001c0001t0044 a0001c0001t0048 a0001c0002t0001 a0001c0002t0004 a0001c0002t0014 a0001c0002t0032 a0001c0002t0038 a0001c0002t0039 a0001c0005t0004 a0001c0005t0013 a0001c0018t0049	a0001c0001t0002g0002 a0001c0001t0002g0047 a0001c0001t0002g0049 others(17): Show a0001c0001t0002g0002 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0003g0090 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0019g0065 a0001c0001t0024g0077 a0001c0001t0044g0041 a0001c0001t0048g0054 a0001c0002t0001g0073 a0001c0002t0004g0079 a0001c0002t0014g0052 a0001c0002t0032g0051 a0001c0002t0038g0086 a0001c0002t0039g0059 a0001c0005t0004g0088 a0001c0005t0013g0050 a0001c0018t0049g0080	20	98	0.2041	-16	c.164 others(35): Show c.164-57977_164-57962delAAAAAAAAAAAAAAAA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235677906	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02976.hp1 NA21309.hp1 HG02280.hp2 HG02976.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0016 a0001c0001 a0001c0010 a0001c0016	a0001c0001t0024 a0001c0010t0001 a0001c0016t0007 a0001c0001t0024 a0001c0010t0001 a0001c0016t0007	a0001c0001t0024g0077 a0001c0010t0001g0032 a0001c0016t0007g0089 a0001c0001t0024g0077 a0001c0010t0001g0032 a0001c0016t0007g0089	3	98	0.0306	-16	c.164 others(35): Show c.164-31237_164-31222delAAAAAAAAAAAAAAAA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235686550	TATATATA others(9): Show TATATATACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01168.hp2 HG01928.hp2 others(3): Show HG01123.hp2 HG01168.hp2 HG01928.hp2 HG02135.hp1 HG02135.hp2 NA19011.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0006 a0002c0004 a0001c0002 a0001c0006 a0002c0004	a0001c0002t0006 a0001c0002t0034 a0001c0006t0001 others(3): Show a0001c0002t0006 a0001c0002t0034 a0001c0006t0001 a0001c0006t0006 a0001c0006t0033 a0002c0004t0001	a0001c0002t0006g0093 a0001c0002t0034g0084 a0001c0006t0001g0016 others(3): Show a0001c0002t0006g0093 a0001c0002t0034g0084 a0001c0006t0001g0016 a0001c0006t0006g0019 a0001c0006t0033g0087 a0002c0004t0001g0025	6	98	0.0612	-16	c.164 others(35): Show c.164-22627_164-22612delTATATACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235686614	GATATAGA others(9): Show GATATAGATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG03139.hp1 HG02976.hp2 HG03139.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0003 a0001c0003t0002 a0001c0003t0003	a0001c0003t0002g0005 a0001c0003t0003g0001 a0001c0003t0002g0005 a0001c0003t0003g0001	2	98	0.0204	-16	c.164 others(35): Show c.164-22559_164-22544delGATATATATATATATA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235787869	AGAGCGTT others(9): Show AGAGCGTTCTAGACCAT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01123.hp2 HG01192.hp1 others(19): Show HG01106.hp1 HG01123.hp2 HG01192.hp1 HG01884.hp1 HG02083.hp2 HG02109.hp1 HG02135.hp1 HG02145.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp2 HG04199.hp2 NA18906.hp1 NA19011.hp2 NA20129.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0014 a0001c0017 a0002c0020	a0001c0001t0003 a0001c0001t0010 a0001c0002t0001 others(17): Show a0001c0001t0003 a0001c0001t0010 a0001c0002t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0009 a0001c0003t0012 a0001c0003t0047 a0001c0005t0001 a0001c0005t0031 a0001c0006t0001 a0001c0006t0006 a0001c0006t0033 a0001c0006t0035 a0001c0006t0037 a0001c0008t0001 a0001c0008t0028 a0001c0014t0016 a0001c0017t0008 a0002c0020t0001	a0001c0001t0003g0034 a0001c0001t0003g0090 a0001c0001t0010g0014 others(19): Show a0001c0001t0003g0034 a0001c0001t0003g0090 a0001c0001t0010g0014 a0001c0002t0001g0013 a0001c0002t0001g0027 a0001c0003t0002g0005 a0001c0003t0003g0001 a0001c0003t0009g0096 a0001c0003t0012g0066 a0001c0003t0047g0033 a0001c0005t0001g0057 a0001c0005t0031g0031 a0001c0006t0001g0016 a0001c0006t0006g0019 a0001c0006t0033g0087 a0001c0006t0035g0044 a0001c0006t0037g0021 a0001c0008t0001g0061 a0001c0008t0028g0029 a0001c0014t0016g0048 a0001c0017t0008g0092 a0002c0020t0001g0022	22	98	0.2245	-16	c.674 others(33): Show c.674-9885_674-9870delGTTCTAGACCATGAGC	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235950887	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02615.hp1 HG02622.hp2 others(11): Show HG01884.hp1 HG02615.hp1 HG02622.hp2 HG02717.hp2 HG02723.hp2 HG02818.hp1 HG02896.hp2 HG03041.hp1 HG03098.hp2 HG03486.hp2 HG03516.hp1 HG03579.hp1 NA19030.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0009 a0001c0018	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0026 a0001c0001t0044 a0001c0002t0014 a0001c0002t0039 a0001c0002t0043 a0001c0003t0047 a0001c0005t0001 a0001c0009t0017 a0001c0018t0049	a0001c0001t0002g0046 a0001c0001t0003g0034 a0001c0001t0003g0036 others(11): Show a0001c0001t0002g0046 a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0026g0095 a0001c0001t0044g0041 a0001c0002t0014g0076 a0001c0002t0039g0059 a0001c0002t0043g0064 a0001c0003t0047g0033 a0001c0005t0001g0057 a0001c0009t0017g0037 a0001c0018t0049g0080	14	98	0.1429	-16	c.148 others(37): Show c.1484-17558_1484-17543delTTTTTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235995065	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03098.hp1 HG02647.hp1 HG03098.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0038 a0001c0002t0042 a0001c0002t0038 a0001c0002t0042	a0001c0002t0038g0086 a0001c0002t0042g0067 a0001c0002t0038g0086 a0001c0002t0042g0067	2	98	0.0204	-16	c.164 others(37): Show c.1645+26456_1645+26471delAAAAAAAAAAAAAAAA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	13/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236043605	TAATCCCG others(9): Show TAATCCCGGCTACTTGG	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03195.hp1 HG02630.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0003t0021 a0001c0001t0003 a0001c0003t0021	a0001c0001t0003g0063 a0001c0003t0021g0023 a0001c0001t0003g0063 a0001c0003t0021g0023	2	98	0.0204	-16	c.189 others(35): Show c.1891+2765_1891+2780delAATCCCGGCTACTTGG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	15/17			chr2	TogoVar
AGAP1_chr2_235489043_236136793	236078037	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03579.hp1 NA20300.hp1 HG02818.hp2 HG03579.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0026 a0001c0002t0004 a0001c0002t0013 a0001c0001t0026 a0001c0002t0004 a0001c0002t0013	a0001c0001t0026g0095 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0001t0026g0095 a0001c0002t0004g0079 a0001c0002t0013g0035	3	98	0.0306	-16	c.211 others(37): Show c.2114+28778_2114+28793delGTGTGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGA_chr4_177425774_177447437	177435943	AACACACA others(9): Show AACACACACACACATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp2 NA19240.hp2 HG02965.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0052 a0001c0001t0006g0052	2	442	0.0045	-16	c.698 others(31): Show c.698+317_698+332delATATGTGTGTGTGTGT	AGA	ENSG00000038002.9	transcript	ENST00000264595.7	protein_coding	6/8			chr4	TogoVar
AGBL1_chr15_86074871_86921156	86158772	AGAATGAC others(9): Show AGAATGACATTATAGAG	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01884.hp2 HG02451.hp1 others(19): Show HG01255.hp1 HG01884.hp2 HG02451.hp1 HG02717.hp1 HG02738.hp2 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02965.hp2 HG03098.hp1 HG03453.hp1 HG03471.hp2 HG03579.hp1 HG03654.hp2 HG06807.hp1 NA18906.hp1 NA18944.hp1 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA20129.hp1 NA20129.hp2	a0001 a0003 a0004 others(5): Show a0001 a0003 a0004 a0005 a0006 a0015 a0018 a0019	a0001c0001 a0001c0002 a0001c0003 others(12): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007 a0001c0019 a0001c0056 a0003c0011 a0003c0034 a0004c0009 a0004c0031 a0005c0016 a0006c0014 a0015c0028 a0018c0038 a0019c0027	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(19): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0002t0018 a0001c0002t0022 a0001c0003t0056 a0001c0003t0063 a0001c0007t0029 a0001c0007t0044 a0001c0019t0001 a0001c0056t0031 a0003c0011t0003 a0003c0011t0022 a0003c0034t0021 a0004c0009t0017 a0004c0031t0015 a0005c0016t0037 a0006c0014t0064 a0015c0028t0013 a0018c0038t0013 a0019c0027t0032	a0001c0001t0001g0111 a0001c0001t0003g0100 a0001c0001t0005g0106 others(19): Show a0001c0001t0001g0111 a0001c0001t0003g0100 a0001c0001t0005g0106 a0001c0001t0009g0099 a0001c0002t0018g0101 a0001c0002t0022g0041 a0001c0003t0056g0026 a0001c0003t0063g0023 a0001c0007t0029g0115 a0001c0007t0044g0114 a0001c0019t0001g0057 a0001c0056t0031g0055 a0003c0011t0003g0105 a0003c0011t0022g0052 a0003c0034t0021g0132 a0004c0009t0017g0008 a0004c0031t0015g0104 a0005c0016t0037g0049 a0006c0014t0064g0040 a0015c0028t0013g0131 a0018c0038t0013g0091 a0019c0027t0032g0116	22	132	0.1667	-16	c.395 others(31): Show c.395-155_395-140delACATTATAGAGGAATG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86196858	TGTGCACA others(9): Show TGTGCACATGTGCGCGC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03654.hp2 NA18944.hp1 HG02257.hp2 HG03654.hp2 NA18944.hp1	a0001 a0001	a0001c0003 a0001c0042 a0001c0003 a0001c0042	a0001c0003t0056 a0001c0003t0063 a0001c0042t0005 a0001c0003t0056 a0001c0003t0063 a0001c0042t0005	a0001c0003t0056g0026 a0001c0003t0063g0023 a0001c0042t0005g0092 a0001c0003t0056g0026 a0001c0003t0063g0023 a0001c0042t0005g0092	3	132	0.0227	-16	c.489 others(35): Show c.489-28054_489-28039delTGCACATGTGCGCGCG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	5/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86250525	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG03540.hp2 NA20129.hp1 HG02602.hp2 HG03540.hp2 NA20129.hp1	a0001 a0017 a0001 a0017	a0001c0003 a0001c0056 a0017c0025 a0001c0003 a0001c0056 a0017c0025	a0001c0003t0051 a0001c0056t0031 a0017c0025t0065 a0001c0003t0051 a0001c0056t0031 a0017c0025t0065	a0001c0003t0051g0024 a0001c0056t0031g0055 a0017c0025t0065g0022 a0001c0003t0051g0024 a0001c0056t0031g0055 a0017c0025t0065g0022	3	132	0.0227	-16	c.735 others(33): Show c.735+2679_735+2694delAAAAAAAAAAAAAAAA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86301641	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02280.hp1 HG02895.hp1 others(1): Show HG01243.hp1 HG02280.hp1 HG02895.hp1 HG02896.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0033 a0001c0001 a0007c0033	a0001c0001t0006 a0001c0001t0008 a0001c0001t0047 others(1): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0047 a0007c0033t0006	a0001c0001t0006g0093 a0001c0001t0008g0102 a0001c0001t0047g0014 others(1): Show a0001c0001t0006g0093 a0001c0001t0008g0102 a0001c0001t0047g0014 a0007c0033t0006g0112	4	132	0.0303	-16	c.237 others(35): Show c.2374+6271_2374+6286delTGTGTGTGTGTGTGTG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86386102	TCCTCCTC others(9): Show TCCTCCTCCCCTCTCCC	T T	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG02055.hp1 HG02922.hp2 others(3): Show HG01258.hp2 HG02055.hp1 HG02922.hp2 HG03098.hp1 HG03540.hp2 HG06807.hp2	a0001 a0006 a0009 others(1): Show a0001 a0006 a0009 a0017	a0001c0001 a0001c0003 a0006c0014 others(2): Show a0001c0001 a0001c0003 a0006c0014 a0009c0035 a0017c0025	a0001c0001t0003 a0001c0003t0008 a0006c0014t0054 others(3): Show a0001c0001t0003 a0001c0003t0008 a0006c0014t0054 a0006c0014t0064 a0009c0035t0007 a0017c0025t0065	a0001c0001t0003g0113 a0001c0003t0008g0125 a0006c0014t0054g0021 others(3): Show a0001c0001t0003g0113 a0001c0003t0008g0125 a0006c0014t0054g0021 a0006c0014t0064g0040 a0009c0035t0007g0045 a0017c0025t0065g0022	6	132	0.0455	-16	c.237 others(37): Show c.2375-11205_2375-11190delTCTCCCCCTCCTCCCC	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86625369	TTTTTTTT others(9): Show TTTTTTTTTTGTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0014 a0014	a0014c0043 a0014c0043	a0014c0043t0001 a0014c0043t0001	a0014c0043t0001g0121 a0014c0043t0001g0121	1	132	0.0076	-16	c.299 others(37): Show c.2995-48894_2995-48879delGTTTTTGTTTTTTTTT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	21/22		INFO_REALIGN_3_PRIME	chr15	TogoVar

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