Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FOXI1_chr5_170100897_170114734	170104899	CGTGTGCG others(9): Show CGTGTGCGTGTGCGCGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02922.hp1 others(1): Show HG02895.hp1 HG02897.hp1 HG02922.hp1 HG03540.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0001 a0001c0004t0004g0001	4	412	0.0097	-16	c.-10 others(27): Show c.-1058_-1043delGTGTGCGTGTGCGCGT	FOXI1	ENSG00000168269.10	transcript	ENST00000306268.8	protein_coding		997		chr5	TogoVar
FOXI2_chr10_127732185_127746183	127736479	TTGGGAAA others(9): Show TTGGGAAAAGCGATGAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp1 HG01256.hp1 HG01258.hp2 others(9): Show HG01192.hp1 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG02280.hp1 HG02622.hp1 HG02647.hp1 HG02922.hp1 HG02970.hp1 HG03471.hp2 HG03486.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0034 a0001c0001t0055 others(5): Show a0001c0001t0032 a0001c0001t0034 a0001c0001t0055 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0146 a0001c0001t0147	a0001c0001t0032g0002 a0001c0001t0034g0002 a0001c0001t0055g0002 others(5): Show a0001c0001t0032g0002 a0001c0001t0034g0002 a0001c0001t0055g0002 a0001c0001t0061g0002 a0001c0001t0062g0002 a0001c0001t0063g0002 a0001c0001t0146g0002 a0001c0001t0147g0002	12	434	0.0277	-16	c.-79 others(25): Show c.-794_-779delTGGGAAAAGCGATGAC	FOXI2	ENSG00000186766.8	transcript	ENST00000388920.5	protein_coding		705		chr10	TogoVar
FOXI2_chr10_127732185_127746183	127740080	ACACCCAC others(9): Show ACACCCACACTCACACT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0148 a0001c0001t0148	a0001c0001t0148g0005 a0001c0001t0148g0005	1	434	0.0023	-16	c.11 others(27): Show c.1119_*1134delCCACACTCACACTCAC	FOXI2	ENSG00000186766.8	transcript	ENST00000388920.5	protein_coding	2/2	1119	INFO_REALIGN_3_PRIME	chr10	TogoVar
FOXI3_chr2_88441787_88457693	88454873	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00323.hp1 others(42): Show HG00099.hp1 HG00280.hp1 HG00323.hp1 HG00423.hp2 HG00642.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01109.hp2 HG01192.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01975.hp2 HG01981.hp2 HG02074.hp2 HG02293.hp1 HG02451.hp1 HG02622.hp2 HG03017.hp2 HG03041.hp1 HG03453.hp2 HG03834.hp2 HG04115.hp1 HG04204.hp2 HG04228.hp1 NA18747.hp1 NA18944.hp2 NA18945.hp2 NA18952.hp2 NA18954.hp1 NA18968.hp1 NA18971.hp1 NA18993.hp2 NA18999.hp1 NA19000.hp1 NA19005.hp2 NA19009.hp1 NA19057.hp2 NA19088.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0007 a0001c0001t0009 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0009 a0001c0001t0012 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0007g0020 a0001c0001t0009g0025 a0001c0001t0012g0027 a0002c0003t0001g0048	45	414	0.1087	-16	c.-23 others(27): Show c.-2354_-2339delACACACACACACACAC	FOXI3	ENSG00000214336.5	transcript	ENST00000428390.3	protein_coding		2181		chr2	TogoVar
FOXJ3_chr1_42171548_42340235	42205315	ATATCATG others(9): Show ATATCATGAAAATAGGT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02451.hp1 HG02572.hp1 others(4): Show HG01891.hp1 HG02451.hp1 HG02572.hp1 HG02922.hp2 HG02970.hp1 HG03225.hp1 NA19240.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0001c0001 a0006c0007	a0001c0001t0003 a0001c0001t0009 a0006c0007t0003 a0001c0001t0003 a0001c0001t0009 a0006c0007t0003	a0001c0001t0003g0216 a0001c0001t0003g0217 a0001c0001t0003g0218 others(4): Show a0001c0001t0003g0216 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0009g0220 a0001c0001t0009g0221 a0006c0007t0003g0222	7	332	0.0211	-16	c.630 others(31): Show c.630+431_630+446delACCTATTTTCATGATA	FOXJ3	ENSG00000198815.9	transcript	ENST00000361346.6	protein_coding	6/12			chr1	TogoVar
FOXJ3_chr1_42171548_42340235	42291025	TATAGATA others(9): Show TATAGATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0057 a0002c0002t0001g0057	1	332	0.0030	-16	c.45- others(33): Show c.45-12369_45-12354delCTATCTATCTATCTAT	FOXJ3	ENSG00000198815.9	transcript	ENST00000361346.6	protein_coding	2/12			chr1	TogoVar
FOXK1_chr7_4677295_4776442	4680660	AAGGAAGG others(9): Show AAGGAAGGAAGGAAGGC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG01256.hp2 HG00408.hp1 HG01256.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0059 a0001c0001t0065 a0001c0001t0059 a0001c0001t0065	a0001c0001t0059g0121 a0001c0001t0065g0011 a0001c0001t0059g0121 a0001c0001t0065g0011	2	294	0.0068	-16	c.-16 others(27): Show c.-1648_-1633delAGGAAGGAAGGAAGGC	FOXK1	ENSG00000164916.11	transcript	ENST00000328914.5	protein_coding		1634		chr7	TogoVar
FOXK1_chr7_4677295_4776442	4697741	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp2 HG01071.hp1 others(12): Show HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01261.hp1 HG01433.hp1 HG01496.hp2 HG02257.hp1 HG02630.hp1 HG02970.hp1 HG03130.hp1 HG03225.hp2 HG03540.hp1 NA19030.hp1 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 others(4): Show a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0011 a0001c0021	a0001c0002t0002 a0001c0002t0004 a0001c0002t0098 others(11): Show a0001c0002t0002 a0001c0002t0004 a0001c0002t0098 a0001c0003t0005 a0001c0003t0015 a0001c0003t0036 a0001c0004t0001 a0001c0004t0007 a0001c0004t0046 a0001c0006t0092 a0001c0006t0093 a0001c0007t0006 a0001c0011t0006 a0001c0021t0027	a0001c0002t0002g0106 a0001c0002t0004g0068 a0001c0002t0098g0268 others(12): Show a0001c0002t0002g0106 a0001c0002t0004g0068 a0001c0002t0098g0268 a0001c0003t0005g0112 a0001c0003t0015g0066 a0001c0003t0015g0094 a0001c0003t0036g0004 a0001c0004t0001g0113 a0001c0004t0007g0263 a0001c0004t0046g0009 a0001c0006t0092g0002 a0001c0006t0093g0002 a0001c0007t0006g0235 a0001c0011t0006g0281 a0001c0021t0027g0271	15	294	0.0510	-16	c.560 others(35): Show c.560+14907_560+14922delGTGTGTGTGTGTGTGT	FOXK1	ENSG00000164916.11	transcript	ENST00000328914.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXK2_chr17_82514732_82609602	82573554	TCTCTCTC others(9): Show TCTCTCTCTCACACACA	T T	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0032 a0001c0003t0001g0032	1	308	0.0033	-16	c.909 others(33): Show c.909+1686_909+1701delTCTCTCTCACACACAC	FOXK2	ENSG00000141568.21	transcript	ENST00000335255.10	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
FOXK2_chr17_82514732_82609602	82573556	TCTCTCTC others(9): Show TCTCTCTCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0034 a0001c0001t0013g0034	1	308	0.0033	-16	c.909 others(33): Show c.909+1688_909+1703delTCTCTCACACACACAC	FOXK2	ENSG00000141568.21	transcript	ENST00000335255.10	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
FOXM1_chr12_2852680_2882174	2860075	GAATCTAG others(9): Show GAATCTAGGAGACTACA	G G	intron_variant intron_variant	MODIFIER	NA18991.hp1 NA18991.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0191 a0001c0001t0001g0191	1	438	0.0023	-16	c.126 others(33): Show c.1267-428_1267-413delTGTAGTCTCCTAGATT	FOXM1	ENSG00000111206.13	transcript	ENST00000359843.8	protein_coding	8/8			chr12	TogoVar
FOXN1_chr17_28501348_28543900	28517244	GGATCCAT others(9): Show GGATCCATACCTCCACA	G G	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02647.hp1 HG03225.hp2 others(3): Show HG02145.hp1 HG02647.hp1 HG03225.hp2 HG03471.hp2 NA19030.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0002c0002t0003	a0001c0001t0001g0009 a0001c0001t0001g0047 a0001c0001t0001g0049 others(3): Show a0001c0001t0001g0009 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0002g0009 a0001c0001t0007g0009 a0002c0002t0003g0048	6	356	0.0169	-16	c.-14 others(33): Show c.-14-6710_-14-6695delATCCATACCTCCACAG	FOXN1	ENSG00000109101.8	transcript	ENST00000579795.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
FOXN1_chr17_28501348_28543900	28523792	TTCTCTCT others(9): Show TTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(149): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp2 HG00673.hp1 HG00735.hp1 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01928.hp2 HG01952.hp2 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp2 HG03471.hp2 HG03516.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 NA18747.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18955.hp1 NA18957.hp1 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18977.hp2 NA18978.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18988.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp2 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19007.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp2 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19074.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0005 a0001c0007 others(5): Show a0001c0001 a0001c0005 a0001c0007 a0001c0013 a0002c0002 a0002c0006 a0002c0014 a0005c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0005t0011 a0001c0007t0001 a0001c0013t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0004 a0002c0006t0002 a0002c0014t0012 a0005c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(90): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0022 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0055 a0001c0001t0001g0086 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0191 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0009 a0001c0001t0002g0140 a0001c0001t0002g0171 a0001c0001t0002g0174 a0001c0001t0002g0190 a0001c0001t0002g0195 a0001c0001t0006g0001 a0001c0001t0006g0027 a0001c0001t0007g0009 a0001c0001t0007g0193 a0001c0001t0008g0002 a0001c0001t0008g0194 a0001c0001t0020g0187 a0001c0001t0021g0183 a0001c0001t0022g0154 a0001c0001t0024g0028 a0001c0005t0011g0061 a0001c0007t0001g0031 a0001c0013t0001g0001 a0002c0002t0001g0142 a0002c0002t0001g0199 a0002c0002t0002g0011 a0002c0002t0002g0155 a0002c0002t0002g0166 a0002c0002t0002g0198 a0002c0002t0003g0001 a0002c0002t0003g0048 a0002c0002t0003g0180 a0002c0002t0003g0181 a0002c0002t0004g0138 a0002c0006t0002g0164 a0002c0014t0012g0192 a0005c0009t0001g0167 a0005c0009t0001g0168 a0005c0009t0001g0169	152	356	0.4270	-16	c.-14 others(31): Show c.-14-139_-14-124delTCTCTCTCTCTCTCTC	FOXN1	ENSG00000109101.8	transcript	ENST00000579795.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
FOXN2_chr2_48309682_48384295	48317595	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0212 a0001c0001t0001g0212	1	344	0.0029	-16	c.-15 others(35): Show c.-157+2796_-157+2811delTTTTTTTTTTTTTTTT	FOXN2	ENSG00000170802.17	transcript	ENST00000340553.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
FOXN2_chr2_48309682_48384295	48353552	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01070.hp2 HG01081.hp2 others(6): Show HG00280.hp1 HG01070.hp2 HG01081.hp2 HG01255.hp2 HG01257.hp1 HG01516.hp2 HG01517.hp2 HG02055.hp1 HG02735.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0006 a0001c0002t0022 a0001c0003t0007 a0001c0002t0006 a0001c0002t0022 a0001c0003t0007	a0001c0002t0006g0236 a0001c0002t0006g0238 a0001c0002t0006g0239 others(6): Show a0001c0002t0006g0236 a0001c0002t0006g0238 a0001c0002t0006g0239 a0001c0002t0006g0240 a0001c0002t0006g0241 a0001c0002t0006g0242 a0001c0002t0006g0243 a0001c0002t0022g0237 a0001c0003t0007g0012	9	344	0.0262	-16	c.538 others(33): Show c.538-5456_538-5441delTGTGTGTGTGTGTGTG	FOXN2	ENSG00000170802.17	transcript	ENST00000340553.8	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
FOXN2_chr2_48309682_48384295	48379795	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0161 a0001c0001t0014g0161	1	344	0.0029	-16	c.43 others(27): Show c.4353_*4368delAAAAAAAAAAAAAAAA	FOXN2	ENSG00000170802.17	transcript	ENST00000340553.8	protein_coding		501		chr2	TogoVar
FOXN3_chr14_89151177_89422233	89161582	TGTGTGTG others(9): Show TGTGTGTGTGTGTGTGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18960.hp1 NA18980.hp1 NA18960.hp1 NA18980.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0031 a0001c0001t0026g0198 a0001c0001t0026g0031 a0001c0001t0026g0198	2	230	0.0087	-16	c.81 others(25): Show c.816_*831delGCACACACACACACAC	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	6/6	816		chr14	TogoVar
FOXN3_chr14_89151177_89422233	89204052	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01192.hp2 HG01255.hp1 others(16): Show HG01106.hp2 HG01192.hp2 HG01255.hp1 HG02300.hp1 HG02559.hp2 HG02615.hp2 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG04228.hp2 NA18960.hp1 NA19068.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0001t0013 a0001c0001t0026 a0001c0001t0044 a0001c0001t0051 a0001c0001t0061 a0001c0001t0067 a0001c0002t0011 a0001c0002t0060 a0001c0002t0066	a0001c0001t0001g0049 a0001c0001t0001g0124 a0001c0001t0001g0166 others(16): Show a0001c0001t0001g0049 a0001c0001t0001g0124 a0001c0001t0001g0166 a0001c0001t0001g0218 a0001c0001t0002g0153 a0001c0001t0002g0179 a0001c0001t0002g0188 a0001c0001t0003g0141 a0001c0001t0011g0180 a0001c0001t0011g0181 a0001c0001t0013g0133 a0001c0001t0026g0198 a0001c0001t0044g0152 a0001c0001t0051g0165 a0001c0001t0061g0161 a0001c0001t0067g0063 a0001c0002t0011g0111 a0001c0002t0060g0114 a0001c0002t0066g0113	19	230	0.0826	-16	c.746 others(35): Show c.746-23262_746-23247delGTGTGTGTGTGTGTGT	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	4/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89233432	AGGAGCTG others(9): Show AGGAGCTGGAATTTCCC	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00544.hp2 HG00609.hp1 others(51): Show HG00140.hp1 HG00544.hp2 HG00609.hp1 HG00642.hp1 HG00673.hp2 HG01070.hp2 HG01106.hp1 HG01123.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01884.hp1 HG01934.hp2 HG01975.hp1 HG01993.hp2 HG02040.hp2 HG02056.hp2 HG02071.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02300.hp2 HG02559.hp1 HG02602.hp2 HG02738.hp1 HG02818.hp1 HG02895.hp2 HG03139.hp2 HG03453.hp2 HG03492.hp1 HG03704.hp2 HG04184.hp1 NA18522.hp2 NA18906.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18950.hp1 NA18950.hp2 NA18965.hp1 NA18969.hp2 NA18985.hp1 NA18997.hp2 NA18998.hp2 NA19007.hp1 NA19030.hp2 NA19068.hp1 NA19078.hp2 NA19088.hp2 NA19240.hp2 NA20805.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(32): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0028 a0001c0001t0036 a0001c0001t0038 a0001c0001t0043 a0001c0001t0045 a0001c0001t0058 a0001c0001t0064 a0001c0001t0065 a0001c0001t0069 a0001c0001t0070 a0001c0001t0074 a0001c0001t0075 a0001c0001t0076 a0001c0001t0078 a0001c0001t0079 a0001c0001t0082 a0001c0001t0084 a0001c0001t0087 a0001c0001t0089 a0001c0001t0094 a0001c0002t0060 a0001c0003t0083	a0001c0001t0001g0026 a0001c0001t0001g0046 a0001c0001t0001g0064 others(51): Show a0001c0001t0001g0026 a0001c0001t0001g0046 a0001c0001t0001g0064 a0001c0001t0001g0072 a0001c0001t0001g0109 a0001c0001t0001g0136 a0001c0001t0001g0142 a0001c0001t0002g0104 a0001c0001t0002g0106 a0001c0001t0004g0074 a0001c0001t0004g0191 a0001c0001t0006g0157 a0001c0001t0007g0014 a0001c0001t0007g0060 a0001c0001t0008g0027 a0001c0001t0008g0050 a0001c0001t0008g0089 a0001c0001t0009g0019 a0001c0001t0009g0021 a0001c0001t0009g0079 a0001c0001t0009g0148 a0001c0001t0009g0150 a0001c0001t0010g0040 a0001c0001t0010g0056 a0001c0001t0012g0125 a0001c0001t0012g0145 a0001c0001t0016g0162 a0001c0001t0018g0091 a0001c0001t0019g0001 a0001c0001t0021g0025 a0001c0001t0021g0042 a0001c0001t0028g0086 a0001c0001t0028g0202 a0001c0001t0036g0011 a0001c0001t0038g0012 a0001c0001t0043g0126 a0001c0001t0045g0030 a0001c0001t0058g0082 a0001c0001t0064g0160 a0001c0001t0065g0201 a0001c0001t0069g0122 a0001c0001t0070g0070 a0001c0001t0074g0211 a0001c0001t0075g0051 a0001c0001t0076g0163 a0001c0001t0078g0067 a0001c0001t0079g0047 a0001c0001t0082g0065 a0001c0001t0084g0073 a0001c0001t0087g0167 a0001c0001t0089g0170 a0001c0001t0094g0034 a0001c0002t0060g0114 a0001c0003t0083g0215	54	230	0.2348	-16	c.745 others(35): Show c.745+47502_745+47517delGGGAAATTCCAGCTCC	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	4/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89288716	CTCTCTCT others(9): Show CTCTCTCTCTATATATA	C C	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0145 a0001c0001t0012g0145	1	230	0.0044	-16	c.681 others(33): Show c.681-7718_681-7703delTATATATAGAGAGAGA	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89288724	CTATATAT others(9): Show CTATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02257.hp2 HG02486.hp2 others(12): Show HG02040.hp1 HG02257.hp2 HG02486.hp2 HG02886.hp2 HG03239.hp2 HG03492.hp2 HG03669.hp1 HG03834.hp2 NA18947.hp2 NA18959.hp2 NA18980.hp1 NA18997.hp1 NA19007.hp1 NA19088.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017 a0001c0001t0026 a0001c0001t0027 a0001c0001t0036 a0001c0001t0039	a0001c0001t0001g0084 a0001c0001t0001g0174 a0001c0001t0003g0016 others(12): Show a0001c0001t0001g0084 a0001c0001t0001g0174 a0001c0001t0003g0016 a0001c0001t0004g0196 a0001c0001t0005g0059 a0001c0001t0006g0102 a0001c0001t0007g0014 a0001c0001t0007g0080 a0001c0001t0009g0216 a0001c0001t0016g0083 a0001c0001t0017g0135 a0001c0001t0026g0031 a0001c0001t0027g0200 a0001c0001t0036g0011 a0001c0001t0039g0223	15	230	0.0652	-16	c.681 others(33): Show c.681-7726_681-7711delTATATATATATATATA	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89289193	AAAAAGAA others(9): Show AAAAAGAAAAGAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02145.hp2 HG02559.hp1 others(9): Show HG01884.hp2 HG02145.hp2 HG02559.hp1 HG02615.hp2 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG03139.hp1 HG03225.hp2 HG06807.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0001t0023 a0001c0001t0041 a0001c0001t0058 a0001c0001t0061 a0001c0001t0072 a0001c0001t0080 a0001c0001t0090 a0001c0002t0023	a0001c0001t0001g0085 a0001c0001t0001g0225 a0001c0001t0002g0153 others(9): Show a0001c0001t0001g0085 a0001c0001t0001g0225 a0001c0001t0002g0153 a0001c0001t0011g0183 a0001c0001t0023g0168 a0001c0001t0041g0156 a0001c0001t0058g0082 a0001c0001t0061g0161 a0001c0001t0072g0226 a0001c0001t0080g0154 a0001c0001t0090g0155 a0001c0002t0023g0112	12	230	0.0522	-16	c.681 others(33): Show c.681-8195_681-8180delCTTTTTCTTTTCTTTT	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89329855	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00639.hp2 HG01109.hp2 others(15): Show HG00558.hp1 HG00639.hp2 HG01109.hp2 HG01123.hp1 HG01255.hp2 HG01517.hp1 HG02145.hp1 HG02559.hp1 HG02809.hp2 HG06807.hp1 NA18747.hp2 NA18950.hp2 NA18965.hp2 NA18967.hp2 NA18985.hp2 NA19060.hp2 NA19068.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 others(12): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0001c0001t0022 a0001c0001t0035 a0001c0001t0038 a0001c0001t0046 a0001c0001t0058 a0001c0001t0072 a0001c0001t0090 a0001c0004t0037	a0001c0001t0001g0101 a0001c0001t0001g0207 a0001c0001t0005g0096 others(15): Show a0001c0001t0001g0101 a0001c0001t0001g0207 a0001c0001t0005g0096 a0001c0001t0005g0099 a0001c0001t0007g0036 a0001c0001t0012g0107 a0001c0001t0013g0133 a0001c0001t0013g0143 a0001c0001t0016g0222 a0001c0001t0017g0037 a0001c0001t0022g0017 a0001c0001t0035g0009 a0001c0001t0038g0012 a0001c0001t0046g0203 a0001c0001t0058g0082 a0001c0001t0072g0226 a0001c0001t0090g0155 a0001c0004t0037g0013	18	230	0.0783	-16	c.680 others(35): Show c.680+20801_680+20816delTTTTTTTTTTTTTTTT	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89333966	GTATATAT others(9): Show GTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01884.hp2 HG01978.hp2 others(14): Show HG01070.hp1 HG01884.hp2 HG01978.hp2 HG02071.hp2 HG02559.hp1 HG02683.hp1 HG03471.hp1 HG03540.hp1 HG03540.hp2 HG03669.hp1 HG06807.hp1 NA18983.hp1 NA18998.hp2 NA19030.hp1 NA19030.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0014 a0001c0001t0019 a0001c0001t0028 a0001c0001t0053 a0001c0001t0056 a0001c0001t0058 a0001c0001t0062 a0001c0001t0063 a0001c0001t0090	a0001c0001t0001g0085 a0001c0001t0001g0119 a0001c0001t0001g0121 others(14): Show a0001c0001t0001g0085 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0002g0176 a0001c0001t0005g0108 a0001c0001t0006g0102 a0001c0001t0008g0027 a0001c0001t0014g0189 a0001c0001t0019g0004 a0001c0001t0028g0086 a0001c0001t0053g0197 a0001c0001t0056g0100 a0001c0001t0058g0082 a0001c0001t0062g0117 a0001c0001t0063g0076 a0001c0001t0090g0155	17	230	0.0739	-16	c.680 others(35): Show c.680+16690_680+16705delTATATATATATATATA	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89333994	ATATATAT others(9): Show ATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0084 a0001c0001t0084	a0001c0001t0084g0073 a0001c0001t0084g0073	1	230	0.0044	-16	c.680 others(35): Show c.680+16662_680+16677delCATATATATATATATA	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89335077	TCACACAC others(9): Show TCACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp2 HG00597.hp1 others(79): Show HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG01070.hp1 HG01081.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01175.hp1 HG01255.hp1 HG01255.hp2 HG01346.hp1 HG01517.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02135.hp1 HG02145.hp1 HG02165.hp2 HG02257.hp2 HG02273.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02738.hp2 HG03017.hp2 HG03239.hp2 HG03492.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG04184.hp2 HG04228.hp1 HG06807.hp1 NA18747.hp1 NA18747.hp2 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18950.hp2 NA18960.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18971.hp1 NA18980.hp2 NA18983.hp1 NA18985.hp1 NA18985.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19065.hp1 NA19068.hp1 NA19068.hp2 NA19078.hp1 NA19088.hp1 NA19088.hp2 NA19240.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(32): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0001t0036 a0001c0001t0038 a0001c0001t0043 a0001c0001t0045 a0001c0001t0046 a0001c0001t0047 a0001c0001t0051 a0001c0001t0053 a0001c0001t0055 a0001c0001t0058 a0001c0001t0090 a0001c0001t0091 a0001c0001t0092 a0001c0001t0097 a0001c0003t0001 a0001c0003t0083	a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0092 others(79): Show a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0092 a0001c0001t0001g0101 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0134 a0001c0001t0001g0142 a0001c0001t0001g0146 a0001c0001t0001g0174 a0001c0001t0001g0199 a0001c0001t0001g0204 a0001c0001t0001g0207 a0001c0001t0001g0227 a0001c0001t0002g0190 a0001c0001t0003g0016 a0001c0001t0003g0141 a0001c0001t0003g0208 a0001c0001t0004g0087 a0001c0001t0004g0103 a0001c0001t0004g0127 a0001c0001t0004g0149 a0001c0001t0005g0096 a0001c0001t0005g0097 a0001c0001t0005g0099 a0001c0001t0005g0108 a0001c0001t0005g0128 a0001c0001t0005g0195 a0001c0001t0005g0213 a0001c0001t0006g0094 a0001c0001t0006g0102 a0001c0001t0007g0014 a0001c0001t0007g0036 a0001c0001t0007g0060 a0001c0001t0007g0144 a0001c0001t0008g0027 a0001c0001t0008g0041 a0001c0001t0008g0050 a0001c0001t0008g0089 a0001c0001t0008g0139 a0001c0001t0009g0021 a0001c0001t0009g0053 a0001c0001t0009g0079 a0001c0001t0009g0148 a0001c0001t0009g0150 a0001c0001t0010g0056 a0001c0001t0012g0107 a0001c0001t0012g0145 a0001c0001t0012g0147 a0001c0001t0012g0171 a0001c0001t0013g0133 a0001c0001t0013g0143 a0001c0001t0015g0088 a0001c0001t0016g0222 a0001c0001t0017g0037 a0001c0001t0017g0135 a0001c0001t0018g0138 a0001c0001t0018g0158 a0001c0001t0022g0017 a0001c0001t0025g0093 a0001c0001t0025g0228 a0001c0001t0026g0198 a0001c0001t0036g0011 a0001c0001t0038g0012 a0001c0001t0043g0126 a0001c0001t0045g0030 a0001c0001t0046g0203 a0001c0001t0047g0116 a0001c0001t0051g0165 a0001c0001t0053g0197 a0001c0001t0055g0028 a0001c0001t0058g0082 a0001c0001t0090g0155 a0001c0001t0091g0129 a0001c0001t0092g0024 a0001c0001t0097g0164 a0001c0003t0001g0052 a0001c0003t0083g0215	82	230	0.3565	-16	c.680 others(35): Show c.680+15579_680+15594delTGTGTGTGTGTGTGTG	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361421	CTCCACCA others(9): Show CTCCACCACCACCTCCT	C C	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0157 a0001c0001t0006g0157	1	230	0.0044	-16	c.544 others(35): Show c.544-10629_544-10614delAGGAGGTGGTGGTGGA	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361427	CACCACCT others(9): Show CACCACCTCCTACCACT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02602.hp1 HG02818.hp1 others(3): Show HG02486.hp2 HG02602.hp1 HG02818.hp1 HG02895.hp2 HG03017.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0015 a0001c0001t0016 others(3): Show a0001c0001t0003 a0001c0001t0015 a0001c0001t0016 a0001c0001t0027 a0001c0001t0076 a0001c0002t0060	a0001c0001t0003g0016 a0001c0001t0015g0088 a0001c0001t0016g0162 others(3): Show a0001c0001t0003g0016 a0001c0001t0015g0088 a0001c0001t0016g0162 a0001c0001t0027g0015 a0001c0001t0076g0163 a0001c0002t0060g0114	6	230	0.0261	-16	c.544 others(35): Show c.544-10635_544-10620delAGTGGTAGGAGGTGGT	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89363947	AATATATA others(9): Show AATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01975.hp2 HG01993.hp1 others(10): Show HG01081.hp1 HG01975.hp2 HG01993.hp1 HG02300.hp1 HG02486.hp2 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG04184.hp2 NA19065.hp1 NA19065.hp2 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0012 a0001c0001t0018 a0001c0001t0025 a0001c0001t0028 a0001c0001t0091 a0001c0003t0001	a0001c0001t0001g0134 a0001c0001t0001g0142 a0001c0001t0001g0146 others(10): Show a0001c0001t0001g0134 a0001c0001t0001g0142 a0001c0001t0001g0146 a0001c0001t0001g0218 a0001c0001t0003g0016 a0001c0001t0004g0127 a0001c0001t0005g0128 a0001c0001t0012g0147 a0001c0001t0018g0158 a0001c0001t0025g0093 a0001c0001t0028g0202 a0001c0001t0091g0129 a0001c0003t0001g0137	13	230	0.0565	-16	c.544 others(35): Show c.544-13155_544-13140delATATATATATATATAT	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89363974	ATATATAT others(9): Show ATATATATATATATAAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp1 NA19043.hp1 HG03195.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0088 a0001c0001t0003 a0001c0001t0088	a0001c0001t0003g0229 a0001c0001t0088g0095 a0001c0001t0003g0229 a0001c0001t0088g0095	2	230	0.0087	-16	c.544 others(35): Show c.544-13182_544-13167delATTATATATATATATA	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5			chr14	TogoVar
FOXN3_chr14_89151177_89422233	89377020	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02602.hp1 NA18969.hp1 HG02602.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0027 a0001c0001t0010 a0001c0001t0027	a0001c0001t0010g0077 a0001c0001t0027g0015 a0001c0001t0010g0077 a0001c0001t0027g0015	2	230	0.0087	-16	c.544 others(35): Show c.544-26228_544-26213delTTTTTTTTTTTTTTTT	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5			chr14	TogoVar
FOXN4_chr12_109272978_109314284	109304221	GAGAAAGA others(9): Show GAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01175.hp1 HG02897.hp2 others(4): Show HG00423.hp2 HG01175.hp1 HG02897.hp2 HG03017.hp2 HG03491.hp2 HG03831.hp2 NA18984.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0008 a0001c0001 a0001c0004 a0003c0008	a0001c0001t0001 a0001c0004t0001 a0003c0008t0002 a0001c0001t0001 a0001c0004t0001 a0003c0008t0002	a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 others(4): Show a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0004t0001g0113 a0001c0004t0001g0114 a0003c0008t0002g0150	7	368	0.0190	-16	c.86+ others(31): Show c.86+3999_86+4014delTTCTTTCTTTCTTTCT	FOXN4	ENSG00000139445.18	transcript	ENST00000299162.10	protein_coding	2/9			chr12	TogoVar
FOXO1_chr13_40550667_40671641	40584469	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02300.hp2 HG02717.hp1 others(13): Show HG00544.hp1 HG02300.hp2 HG02717.hp1 HG02717.hp2 NA18943.hp2 NA18945.hp2 NA18946.hp1 NA18957.hp2 NA18961.hp1 NA18969.hp2 NA18974.hp1 NA18978.hp1 NA18980.hp1 NA18991.hp1 NA19079.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0002g0175 a0001c0001t0003g0092 a0001c0001t0004g0004 others(12): Show a0001c0001t0002g0175 a0001c0001t0003g0092 a0001c0001t0004g0004 a0001c0001t0004g0241 a0001c0001t0004g0263 a0001c0001t0004g0268 a0001c0001t0004g0320 a0001c0001t0004g0343 a0001c0001t0004g0347 a0001c0001t0004g0348 a0001c0001t0004g0349 a0001c0001t0004g0350 a0001c0001t0004g0351 a0001c0001t0004g0353 a0001c0001t0021g0352	16	394	0.0406	-16	c.631 others(35): Show c.631-23625_631-23610delTTTTTTTTTTTTTTTT	FOXO1	ENSG00000150907.10	transcript	ENST00000379561.6	protein_coding	1/2			chr13	TogoVar
FOXO4_chrX_71090851_71108532	71094200	AGAAGGAA others(9): Show AGAAGGAAGGAAGGAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	295	0.0034	-16	c.-23 others(27): Show c.-2328_-2313delGAAGGAAGGAAGGAAG	FOXO4	ENSG00000184481.17	transcript	ENST00000374259.8	protein_coding		1650		chrX	TogoVar
FOXO4_chrX_71090851_71108532	71094241	GAAGGAAG others(9): Show GAAGGAAGGAAGGAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG02083.hp1 HG02559.hp1 others(8): Show HG00099.hp2 HG02083.hp1 HG02559.hp1 HG02559.hp2 HG02622.hp1 HG03579.hp1 NA18939.hp1 NA18947.hp2 NA18994.hp1 NA19055.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 a0001c0001t0001 a0001c0001t0003 a0001c0001t0016	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(4): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0003g0003 a0001c0001t0016g0002	11	295	0.0373	-16	c.-22 others(27): Show c.-2287_-2272delAAGGAAGGAAGGAGAA	FOXO4	ENSG00000184481.17	transcript	ENST00000374259.8	protein_coding		1609		chrX	TogoVar
FOXO4_chrX_71090851_71108532	71094245	GAAGGAAG others(9): Show GAAGGAAGGAGAAAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp2 HG01081.hp2 HG02165.hp2 others(4): Show HG00544.hp2 HG01081.hp2 HG02165.hp2 HG02630.hp2 HG02698.hp1 HG02809.hp2 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0002g0002	7	295	0.0237	-16	c.-22 others(27): Show c.-2283_-2268delAAGGAAGGAGAAAGAA	FOXO4	ENSG00000184481.17	transcript	ENST00000374259.8	protein_coding		1605		chrX	TogoVar
FOXO4_chrX_71090851_71108532	71094249	GAAGGAGA others(9): Show GAAGGAGAAAGAAAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp1 HG02148.hp2 HG02970.hp2 others(1): Show HG00544.hp1 HG02148.hp2 HG02970.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0005 a0001c0001t0002g0002 a0001c0001t0002g0019 a0001c0001t0001g0005 a0001c0001t0002g0002 a0001c0001t0002g0019	4	295	0.0136	-16	c.-22 others(27): Show c.-2279_-2264delAAGGAGAAAGAAAGAA	FOXO4	ENSG00000184481.17	transcript	ENST00000374259.8	protein_coding		1601		chrX	TogoVar
FOXO4_chrX_71090851_71108532	71094281	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	295	0.0034	-16	c.-22 others(27): Show c.-2247_-2232delAAAGAAAGAAAGAAAG	FOXO4	ENSG00000184481.17	transcript	ENST00000374259.8	protein_coding		1569		chrX	TogoVar
FOXP1_chr3_70949708_71588728	71057291	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0022 a0001c0001t0005g0022	1	96	0.0104	-16	c.283 others(33): Show c.283-3534_283-3519delAAAAAAAAAAAAAAAA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	7/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71158147	AGGAGGGA others(9): Show AGGAGGGAGGGAGGCAG	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp1 HG03139.hp1 others(1): Show HG02109.hp1 HG02486.hp1 HG03139.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0034 a0001c0001t0042 others(1): Show a0001c0001t0026 a0001c0001t0034 a0001c0001t0042 a0001c0001t0082	a0001c0001t0026g0083 a0001c0001t0034g0040 a0001c0001t0042g0059 others(1): Show a0001c0001t0026g0083 a0001c0001t0034g0040 a0001c0001t0042g0059 a0001c0001t0082g0007	4	96	0.0417	-16	c.180 others(35): Show c.180+40039_180+40054delCTGCCTCCCTCCCTCC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	6/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71203938	GAGGAAGG others(9): Show GAGGAAGGAAGGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02976.hp2 NA19043.hp2 others(1): Show HG02809.hp2 HG02976.hp2 NA19043.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0033 others(1): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0033 a0001c0001t0066	a0001c0001t0004g0056 a0001c0001t0007g0067 a0001c0001t0033g0057 others(1): Show a0001c0001t0004g0056 a0001c0001t0007g0067 a0001c0001t0033g0057 a0001c0001t0066g0023	4	96	0.0417	-16	c.-11 others(33): Show c.-11-5562_-11-5547delTCCTTCCTTCCTTCCT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71250127	TTGTGTAA others(9): Show TTGTGTAAGCTACCCTA	T T	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03041.hp2 HG03579.hp1 HG02809.hp1 HG03041.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0068 a0001c0001t0003 a0001c0001t0005 a0001c0001t0068	a0001c0001t0003g0026 a0001c0001t0005g0004 a0001c0001t0068g0096 a0001c0001t0003g0026 a0001c0001t0005g0004 a0001c0001t0068g0096	3	96	0.0313	-16	c.-12 others(35): Show c.-12+49677_-12+49692delTAGGGTAGCTTACACA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71306497	CTCTGTAC others(9): Show CTCTGTACCTACAAAGA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03139.hp2 NA19043.hp2 HG02809.hp2 HG03139.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0066 a0001c0001t0076 a0001c0001t0033 a0001c0001t0066 a0001c0001t0076	a0001c0001t0033g0057 a0001c0001t0066g0023 a0001c0001t0076g0024 a0001c0001t0033g0057 a0001c0001t0066g0023 a0001c0001t0076g0024	3	96	0.0313	-16	c.-72 others(33): Show c.-72-6633_-72-6618delTCTTTGTAGGTACAGA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71308749	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG02055.hp1 HG02109.hp2 others(8): Show HG01516.hp1 HG02055.hp1 HG02109.hp2 HG02572.hp1 HG02809.hp1 HG03130.hp2 HG03209.hp2 HG03453.hp1 HG03579.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(6): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0022 a0001c0001t0023 a0001c0001t0032 a0001c0001t0039 a0001c0001t0052	a0001c0001t0002g0051 a0001c0001t0003g0026 a0001c0001t0003g0086 others(8): Show a0001c0001t0002g0051 a0001c0001t0003g0026 a0001c0001t0003g0086 a0001c0001t0008g0036 a0001c0001t0008g0039 a0001c0001t0009g0016 a0001c0001t0022g0047 a0001c0001t0023g0045 a0001c0001t0032g0089 a0001c0001t0039g0003 a0001c0001t0052g0084	11	96	0.1146	-16	c.-72 others(33): Show c.-72-8885_-72-8870delCACACACACACACACA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71345397	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0073 a0001c0001t0010g0073	1	96	0.0104	-16	c.-73 others(35): Show c.-73+13737_-73+13752delGTGTGTGTGTGTGTGT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71348506	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGC	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0059 a0001c0001t0059	a0001c0001t0059g0087 a0001c0001t0059g0087	1	96	0.0104	-16	c.-73 others(35): Show c.-73+10628_-73+10643delGCACACACACACACAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71411278	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0080 a0001c0001t0002g0080	1	96	0.0104	-16	c.-16 others(37): Show c.-167-52050_-167-52035delACACACACACACACAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71411316	TGTATGTG others(9): Show TGTATGTGTGTGTGTGA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02717.hp2 HG02897.hp1 others(1): Show HG02258.hp1 HG02717.hp2 HG02897.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0025 a0001c0001t0001 a0001c0001t0005 a0001c0001t0025	a0001c0001t0001g0021 a0001c0001t0001g0044 a0001c0001t0005g0022 others(1): Show a0001c0001t0001g0021 a0001c0001t0001g0044 a0001c0001t0005g0022 a0001c0001t0025g0015	4	96	0.0417	-16	c.-16 others(37): Show c.-167-52088_-167-52073delTCACACACACACATAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71416547	AACACACA others(9): Show AACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0061 a0001c0001t0061	a0001c0001t0061g0077 a0001c0001t0061g0077	1	96	0.0104	-16	c.-16 others(37): Show c.-167-57319_-167-57304delGTGTGTGTGTGTGTGT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71446036	GGTGAGTG others(9): Show GGTGAGTGAGTGAGTGA	G G	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01516.hp1 HG01516.hp2 others(16): Show HG01071.hp2 HG01516.hp1 HG01516.hp2 HG01952.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02486.hp1 HG02572.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG03139.hp2 HG03209.hp1 HG06807.hp1 NA19030.hp1 NA19043.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0010 a0001c0001t0014 a0001c0001t0019 a0001c0001t0020 a0001c0001t0026 a0001c0001t0028 a0001c0001t0033 a0001c0001t0049 a0001c0001t0051 a0001c0001t0066 a0001c0001t0070 a0001c0001t0076 a0001c0001t0080 a0001c0001t0084	a0001c0001t0001g0038 a0001c0001t0002g0080 a0001c0001t0003g0026 others(16): Show a0001c0001t0001g0038 a0001c0001t0002g0080 a0001c0001t0003g0026 a0001c0001t0004g0009 a0001c0001t0008g0039 a0001c0001t0010g0073 a0001c0001t0014g0066 a0001c0001t0019g0088 a0001c0001t0020g0010 a0001c0001t0026g0083 a0001c0001t0028g0049 a0001c0001t0033g0057 a0001c0001t0049g0070 a0001c0001t0051g0081 a0001c0001t0066g0023 a0001c0001t0070g0025 a0001c0001t0076g0024 a0001c0001t0080g0075 a0001c0001t0084g0061	19	96	0.1979	-16	c.-16 others(37): Show c.-168+47374_-168+47389delTCACTCACTCACTCAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar

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