Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GINM1_chr6_149561375_149596748	149570136	TTATATAT others(9): Show TTATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00735.hp1 HG00741.hp2 others(9): Show HG00099.hp1 HG00735.hp1 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG02258.hp1 HG02293.hp2 HG02886.hp2 HG02970.hp1 NA18998.hp1 NA19240.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006	a0001c0001t0002g0114 a0001c0001t0002g0147 a0001c0001t0003g0009 others(6): Show a0001c0001t0002g0114 a0001c0001t0002g0147 a0001c0001t0003g0009 a0001c0001t0003g0146 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0006g0015 a0001c0001t0006g0046 a0001c0001t0006g0057	12	380	0.0316	-16	c.121 others(33): Show c.121-2102_121-2087delTATATATATATATATA	GINM1	ENSG00000055211.14	transcript	ENST00000367419.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GINS3_chr16_58387471_58411147	58409230	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 HG00423.hp2 HG00438.hp1 others(37): Show HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00609.hp2 HG00621.hp1 HG01106.hp1 HG02027.hp2 HG02040.hp2 HG02074.hp2 HG02129.hp2 HG02523.hp1 HG02886.hp1 HG03017.hp2 HG03688.hp1 HG04204.hp1 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18945.hp1 NA18950.hp2 NA18954.hp1 NA18955.hp1 NA18957.hp1 NA18961.hp2 NA18964.hp2 NA18968.hp1 NA18974.hp1 NA18986.hp2 NA18988.hp2 NA19003.hp1 NA19012.hp2 NA19058.hp2 NA19067.hp2 NA19068.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0013 a0001c0001t0001 a0001c0001t0012 a0001c0001t0013	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0011 others(11): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0104 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0132 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0165 a0001c0001t0012g0096 a0001c0001t0013g0130	40	434	0.0922	-16	c.45 others(27): Show c.4502_*4517delTGTGTGTGTGTGTGTG	GINS3	ENSG00000181938.14	transcript	ENST00000318129.6	protein_coding		3084		chr16	TogoVar
GIPC1_chr19_14472762_14501127	14485698	TATATAGA others(9): Show TATATAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03195.hp2 NA18971.hp1 others(1): Show HG02486.hp2 HG03195.hp2 NA18971.hp1 NA19084.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0003 a0001c0003t0011 a0001c0003t0001 a0001c0003t0003 a0001c0003t0011	a0001c0003t0001g0132 a0001c0003t0003g0272 a0001c0003t0011g0334 others(1): Show a0001c0003t0001g0132 a0001c0003t0003g0272 a0001c0003t0011g0334 a0001c0003t0011g0335	4	444	0.0090	-16	c.-30 others(33): Show c.-30-2708_-30-2693delCTCTCTCTCTCTATAT	GIPC1	ENSG00000123159.16	transcript	ENST00000393033.9	protein_coding	3/8			chr19	TogoVar
GIPC1_chr19_14472762_14501127	14485700	TATAGAGA others(9): Show TATAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18943.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0131 a0001c0003t0001g0131	1	444	0.0023	-16	c.-30 others(33): Show c.-30-2710_-30-2695delCTCTCTCTCTCTCTAT	GIPC1	ENSG00000123159.16	transcript	ENST00000393033.9	protein_coding	3/8			chr19	TogoVar
GIPC1_chr19_14472762_14501127	14485702	TAGAGAGA others(9): Show TAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG02055.hp2 HG02109.hp2 others(2): Show HG01975.hp1 HG02055.hp2 HG02109.hp2 NA18969.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0013 a0001c0001t0058 a0001c0003t0001 a0001c0001t0013 a0001c0001t0058 a0001c0003t0001	a0001c0001t0013g0369 a0001c0001t0058g0382 a0001c0003t0001g0122 others(2): Show a0001c0001t0013g0369 a0001c0001t0058g0382 a0001c0003t0001g0122 a0001c0003t0001g0123 a0001c0003t0001g0141	5	444	0.0113	-16	c.-30 others(33): Show c.-30-2712_-30-2697delCTCTCTCTCTCTCTCT	GIPC1	ENSG00000123159.16	transcript	ENST00000393033.9	protein_coding	3/8			chr19	TogoVar
GIPC2_chr1_78040966_78143444	78133750	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0199 a0002c0002t0001g0199	1	332	0.0030	-16	c.797 others(33): Show c.797-1818_797-1803delGTGTGTGTGTGTGTGT	GIPC2	ENSG00000137960.6	transcript	ENST00000370759.4	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
GIT1_chr17_29568475_29594648	29575746	ACCCACAC others(9): Show ACCCACACTGCCCCTAG	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02723.hp1 HG02886.hp1 others(8): Show HG02622.hp1 HG02723.hp1 HG02886.hp1 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp1 HG03540.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0001 a0001c0001t0002 a0001c0001t0009	a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0102 others(3): Show a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0102 a0001c0001t0001g0112 a0001c0001t0002g0042 a0001c0001t0009g0111	11	400	0.0275	-16	c.175 others(31): Show c.1752+50_1753-44delCTAGGGGCAGTGTGGG	GIT1	ENSG00000108262.16	transcript	ENST00000225394.8	protein_coding	16/19			chr17	TogoVar
GIT2_chr12_109924804_110001368	109939682	AAAATAAA others(9): Show AAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00558.hp1 HG01109.hp1 others(32): Show HG00423.hp1 HG00558.hp1 HG01109.hp1 HG01884.hp1 HG01884.hp2 HG02040.hp1 HG02071.hp1 HG02109.hp1 HG02257.hp1 HG02258.hp1 HG02572.hp2 HG02698.hp2 HG02965.hp1 HG02970.hp1 HG03041.hp2 HG03098.hp2 HG04115.hp2 NA18522.hp2 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18954.hp2 NA18959.hp1 NA18961.hp2 NA18973.hp2 NA19001.hp1 NA19010.hp2 NA19056.hp2 NA19063.hp2 NA19075.hp1 NA19077.hp1 NA19088.hp1 NA19090.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0002c0012 a0001c0003 a0002c0002 a0002c0012	a0001c0003t0004 a0001c0003t0007 a0002c0002t0004 others(3): Show a0001c0003t0004 a0001c0003t0007 a0002c0002t0004 a0002c0002t0008 a0002c0002t0014 a0002c0012t0004	a0001c0003t0004g0041 a0001c0003t0004g0042 a0001c0003t0007g0034 others(32): Show a0001c0003t0004g0041 a0001c0003t0004g0042 a0001c0003t0007g0034 a0001c0003t0007g0035 a0001c0003t0007g0037 a0001c0003t0007g0038 a0001c0003t0007g0039 a0002c0002t0004g0007 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0011 a0002c0002t0004g0012 a0002c0002t0004g0014 a0002c0002t0004g0016 a0002c0002t0004g0017 a0002c0002t0004g0021 a0002c0002t0004g0022 a0002c0002t0004g0023 a0002c0002t0004g0024 a0002c0002t0004g0025 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0029 a0002c0002t0004g0030 a0002c0002t0004g0031 a0002c0002t0004g0032 a0002c0002t0004g0033 a0002c0002t0004g0040 a0002c0002t0008g0005 a0002c0002t0008g0006 a0002c0002t0008g0015 a0002c0002t0008g0019 a0002c0002t0008g0020 a0002c0002t0014g0018 a0002c0012t0004g0013	35	242	0.1446	-16	c.173 others(33): Show c.1732-451_1732-436delATTTATTTATTTATTT	GIT2	ENSG00000139436.22	transcript	ENST00000355312.8	protein_coding	16/19			chr12	TogoVar
GIT2_chr12_109924804_110001368	109964620	GACACACA others(9): Show GACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02055.hp1 HG02486.hp1 HG01074.hp1 HG02055.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0136 a0001c0001t0006g0218 a0001c0001t0006g0220 a0001c0001t0002g0136 a0001c0001t0006g0218 a0001c0001t0006g0220	3	242	0.0124	-16	c.816 others(31): Show c.816+890_816+905delGTGTGTGTGTGTGTGT	GIT2	ENSG00000139436.22	transcript	ENST00000355312.8	protein_coding	9/19			chr12	TogoVar
GJA9_chr1_38869069_38886587	38882339	TATATATA others(9): Show TATATATATATATTTAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02257.hp2 HG03471.hp1 HG02257.hp2 HG03471.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0029 a0001c0005t0002g0029	2	444	0.0045	-16	c.-10 others(27): Show c.-1019_-1004delGTAAATATATATATAT	GJA9	ENSG00000131233.10	transcript	ENST00000357771.5	protein_coding		753		chr1	TogoVar
GJA9_chr1_38869069_38886587	38884573	AAAATAAA others(9): Show AAAATAAATAAATAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG01109.hp1 HG01891.hp2 others(4): Show HG00642.hp1 HG01109.hp1 HG01891.hp2 HG02451.hp2 HG02723.hp2 HG03041.hp1 NA20129.hp1	a0004 a0007 a0004 a0007	a0004c0007 a0007c0015 a0004c0007 a0007c0015	a0004c0007t0006 a0007c0015t0006 a0004c0007t0006 a0007c0015t0006	a0004c0007t0006g0021 a0004c0007t0006g0068 a0004c0007t0006g0074 others(1): Show a0004c0007t0006g0021 a0004c0007t0006g0068 a0004c0007t0006g0074 a0007c0015t0006g0075	7	444	0.0158	-16	c.-32 others(27): Show c.-3253_-3238delATTTATTTATTTATTT	GJA9	ENSG00000131233.10	transcript	ENST00000357771.5	protein_coding		2987		chr1	TogoVar
GJB2_chr13_20182470_20197938	20191640	TGGCCTCC others(9): Show TGGCCTCCCGACCCTGG	T T	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0040	1	420	0.0024	-16	c.-23 others(33): Show c.-23+1127_-23+1142delCCAGGGTCGGGAGGCC	GJB2	ENSG00000165474.8	transcript	ENST00000382848.5	protein_coding	1/1			chr13	TogoVar
GJB5_chr1_34750047_34763512	34752221	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG01884.hp1 others(1): Show HG01167.hp1 HG01169.hp2 HG01884.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0008 a0001c0005t0009 a0001c0001t0008 a0001c0005t0009	a0001c0001t0008g0007 a0001c0005t0009g0018 a0001c0001t0008g0007 a0001c0005t0009g0018	4	468	0.0086	-16	c.-29 others(27): Show c.-2998_-2983delGTGTGTGTGTGTGTGT	GJB5	ENSG00000189280.3	transcript	ENST00000338513.1	protein_coding		2825		chr1	TogoVar
GJB6_chr13_20216962_20237319	20233436	AATTTATT others(9): Show AATTTATTTATTTATTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	460	0.0022	-16	c.-16 others(27): Show c.-1678_-1663delAAATAAATAAATAAAT	GJB6	ENSG00000121742.19	transcript	ENST00000647029.1	protein_coding		1118		chr13	TogoVar
GJB7_chr6_87277980_87334278	87329498	CTCCTGAC others(9): Show CTCCTGACCTCAAGTGA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 HG01109.hp1 HG01358.hp2 others(14): Show HG00741.hp1 HG01109.hp1 HG01358.hp2 HG02145.hp2 HG02257.hp1 HG02486.hp2 HG02559.hp2 HG02809.hp1 HG02965.hp1 HG02976.hp1 HG03195.hp2 HG03471.hp1 HG06807.hp2 NA19030.hp1 NA19240.hp1 NA19240.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0027 a0003c0003t0005g0050 a0003c0003t0005g0231 others(11): Show a0003c0003t0005g0027 a0003c0003t0005g0050 a0003c0003t0005g0231 a0003c0003t0005g0234 a0003c0003t0005g0235 a0003c0003t0005g0236 a0003c0003t0005g0237 a0003c0003t0005g0238 a0003c0003t0005g0239 a0003c0003t0005g0240 a0003c0003t0005g0241 a0003c0003t0005g0242 a0003c0003t0005g0243 a0003c0003t0005g0244	17	382	0.0445	-16	c.-58 others(25): Show c.-582_-567delTCACTTGAGGTCAGGA	GJB7	ENSG00000164411.12	transcript	ENST00000525899.6	protein_coding		221		chr6	TogoVar
GJC1_chr17_44793448_44835287	44819659	AAAATAAA others(9): Show AAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0141 a0001c0001t0002g0141	1	380	0.0026	-16	c.-97 others(35): Show c.-97+10387_-97+10402delATTTATTTATTTATTT	GJC1	ENSG00000182963.11	transcript	ENST00000592524.6	protein_coding	1/2			chr17	TogoVar
GJD2_chr15_34746032_34759998	34746208	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG03209.hp1 NA18906.hp1 others(3): Show HG02280.hp1 HG03209.hp1 NA18906.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0020 a0001c0003t0023 a0001c0003t0026 others(1): Show a0001c0003t0020 a0001c0003t0023 a0001c0003t0026 a0001c0003t0054	a0001c0003t0020g0018 a0001c0003t0023g0019 a0001c0003t0026g0031 others(1): Show a0001c0003t0020g0018 a0001c0003t0023g0019 a0001c0003t0026g0031 a0001c0003t0054g0072	6	446	0.0135	-16	c.62 others(27): Show c.6254_*6269delTTTTTTTTTTTTTTTT	GJD2	ENSG00000159248.5	transcript	ENST00000290374.5	protein_coding		4823		chr15	TogoVar
GJD2_chr15_34746032_34759998	34746225	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp2 NA21309.hp2 HG06807.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0012 a0001c0003t0029 a0001c0002t0012 a0001c0003t0029	a0001c0002t0012g0048 a0001c0003t0029g0028 a0001c0002t0012g0048 a0001c0003t0029g0028	2	446	0.0045	-16	c.62 others(27): Show c.6237_*6252delATTTTTTTTTTTTTTT	GJD2	ENSG00000159248.5	transcript	ENST00000290374.5	protein_coding		4806		chr15	TogoVar
GJD2_chr15_34746032_34759998	34746227	AAAAAAAA others(9): Show AAAAAAAAAAAAAATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0046 a0001c0003t0046	a0001c0003t0046g0049 a0001c0003t0046g0049	1	446	0.0022	-16	c.62 others(27): Show c.6235_*6250delATATTTTTTTTTTTTT	GJD2	ENSG00000159248.5	transcript	ENST00000290374.5	protein_coding		4804		chr15	TogoVar
GJD3_chr17_40355652_40369737	40369300	TACACACA others(9): Show TACACACACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp1 HG01361.hp1 HG01993.hp2 others(1): Show HG00733.hp1 HG01361.hp1 HG01993.hp2 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0019 a0001c0001t0002 a0001c0001t0006 a0001c0001t0019	a0001c0001t0002g0000 a0001c0001t0006g0000 a0001c0001t0019g0000 a0001c0001t0002g0000 a0001c0001t0006g0000 a0001c0001t0019g0000	4	370	0.0108	-16	c.-55 others(27): Show c.-5501_-5486delGTGTGTGTGTGTGTGT	GJD3	ENSG00000183153.7	transcript	ENST00000578689.2	protein_coding		4564		chr17	TogoVar
GK5_chr3_142152527_142230585	142227397	AATACATA others(9): Show AATACATACATACATAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01123.hp2 HG02148.hp1 HG01123.hp2 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0199 a0001c0001t0001g0200	2	272	0.0074	-16	c.-19 others(27): Show c.-1958_-1943delGTATGTATGTATGTAT	GK5	ENSG00000175066.16	transcript	ENST00000392993.7	protein_coding		1813		chr3	TogoVar
GK5_chr3_142152527_142230585	142227430	ATACATAC others(9): Show ATACATACATACATACT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp2 HG03098.hp1 NA18952.hp2 others(1): Show HG01358.hp2 HG03098.hp1 NA18952.hp2 NA18957.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0025 a0001c0001t0001 a0001c0001t0010 a0001c0001t0025	a0001c0001t0001g0099 a0001c0001t0001g0102 a0001c0001t0010g0033 others(1): Show a0001c0001t0001g0099 a0001c0001t0001g0102 a0001c0001t0010g0033 a0001c0001t0025g0116	4	272	0.0147	-16	c.-19 others(27): Show c.-1991_-1976delAGTATGTATGTATGTA	GK5	ENSG00000175066.16	transcript	ENST00000392993.7	protein_coding		1846		chr3	TogoVar
GKN1_chr2_68969636_68985976	68972749	GTGTATGT others(9): Show GTGTATGTATGTATGTA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0090 a0001c0003t0003g0090	1	464	0.0022	-16	c.-19 others(27): Show c.-1928_-1913delTGTATGTATGTATGTA	GKN1	ENSG00000169605.7	transcript	ENST00000377938.4	protein_coding		1886		chr2	TogoVar
GK_chrX_30648423_30736462	30649478	CAAAAAAA others(9): Show CAAAAAAAAAACAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02622.hp1 HG02886.hp1 others(3): Show HG02055.hp1 HG02622.hp1 HG02886.hp1 HG02897.hp1 NA18522.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0172 a0001c0001t0004g0174 a0001c0001t0004g0175 others(3): Show a0001c0001t0004g0172 a0001c0001t0004g0174 a0001c0001t0004g0175 a0001c0001t0004g0176 a0001c0001t0004g0177 a0001c0001t0004g0182	6	286	0.0210	-16	c.-40 others(27): Show c.-4059_-4044delAAAAAAAAAACAAAAA	GK	ENSG00000198814.14	transcript	ENST00000427190.6	protein_coding		3944		chrX	TogoVar
GLB1L3_chr11_134271379_134324564	134312913	TGCCCTCG others(9): Show TGCCCTCGACCCCCCTC	T T	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0344 a0001c0002t0002g0344	1	422	0.0024	-16	c.150 others(31): Show c.1500+27_1500+42delGCCCTCGACCCCCCTC	GLB1L3	ENSG00000166105.16	transcript	ENST00000431683.7	protein_coding	15/19			chr11	TogoVar
GLB1L_chr2_219231598_219250444	219241428	GTGTGTGT others(9): Show GTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0065 a0001c0001t0003g0065	1	410	0.0024	-16	c.451 others(33): Show c.451+1070_451+1085delTACACACACACACACA	GLB1L	ENSG00000163521.16	transcript	ENST00000295759.12	protein_coding	5/16			chr2	TogoVar
GLB1_chr3_32991617_33102146	33031634	AAAAAAAA others(9): Show AAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0224 a0001c0001t0001g0224	1	394	0.0025	-16	c.106 others(35): Show c.1069-7325_1069-7310delATATATATATTTTTTT	GLB1	ENSG00000170266.16	transcript	ENST00000307363.10	protein_coding	10/15			chr3	TogoVar
GLB1_chr3_32991617_33102146	33059244	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02165.hp2 HG04228.hp2 others(1): Show HG01361.hp2 HG02165.hp2 HG04228.hp2 NA18968.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0002 a0001c0001 a0001c0006 a0002c0002	a0001c0001t0001 a0001c0006t0001 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0006t0001 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0114 a0001c0006t0001g0124 a0002c0002t0001g0335 others(1): Show a0001c0001t0001g0114 a0001c0006t0001g0124 a0002c0002t0001g0335 a0002c0002t0002g0319	4	394	0.0102	-16	c.553 others(31): Show c.553-991_553-976delGTGTGTGTGTGTGTGT	GLB1	ENSG00000170266.16	transcript	ENST00000307363.10	protein_coding	5/15			chr3	TogoVar
GLB1_chr3_32991617_33102146	33088368	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0272 a0002c0003t0001g0272	1	394	0.0025	-16	c.75+ others(31): Show c.75+8627_75+8642delGTGTGTGTGTGTGTGT	GLB1	ENSG00000170266.16	transcript	ENST00000307363.10	protein_coding	1/15			chr3	TogoVar
GLCCI1_chr7_7963796_8094080	7992043	TTTTCTTT others(9): Show TTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01358.hp1 HG01943.hp2 others(25): Show HG00621.hp1 HG01358.hp1 HG01943.hp2 HG01978.hp2 HG02080.hp1 HG02080.hp2 HG03017.hp1 HG03834.hp2 NA18612.hp1 NA18953.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18979.hp2 NA18983.hp1 NA18987.hp2 NA18989.hp1 NA18995.hp1 NA19005.hp2 NA19006.hp2 NA19057.hp1 NA19060.hp2 NA19063.hp2 NA19080.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0035 a0001c0001t0047 a0001c0001t0048 a0001c0001t0073 a0001c0002t0005 a0001c0002t0017 a0001c0002t0024 a0001c0002t0056	a0001c0001t0001g0138 a0001c0001t0001g0272 a0001c0001t0004g0390 others(23): Show a0001c0001t0001g0138 a0001c0001t0001g0272 a0001c0001t0004g0390 a0001c0001t0004g0401 a0001c0001t0004g0403 a0001c0001t0004g0404 a0001c0001t0006g0388 a0001c0001t0006g0392 a0001c0001t0006g0393 a0001c0001t0006g0398 a0001c0001t0009g0099 a0001c0001t0009g0389 a0001c0001t0035g0387 a0001c0001t0047g0405 a0001c0001t0048g0391 a0001c0001t0073g0408 a0001c0002t0005g0117 a0001c0002t0005g0128 a0001c0002t0005g0129 a0001c0002t0005g0131 a0001c0002t0005g0135 a0001c0002t0017g0001 a0001c0002t0017g0127 a0001c0002t0017g0133 a0001c0002t0024g0132 a0001c0002t0056g0134	28	416	0.0673	-16	c.458 others(35): Show c.458-11823_458-11808delTTCTTTCTTTCTTTCT	GLCCI1	ENSG00000106415.13	transcript	ENST00000223145.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
GLCCI1_chr7_7963796_8094080	7992085	TTCTTTCT others(9): Show TTCTTTCTTTCTTTCTG	T T	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0281 a0001c0001t0001g0281	1	416	0.0024	-16	c.458 others(35): Show c.458-11819_458-11804delTTCTTTCTTTCTGTCT	GLCCI1	ENSG00000106415.13	transcript	ENST00000223145.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
GLCCI1_chr7_7963796_8094080	7997926	CAAATAAA others(9): Show CAAATAAATAAATAAAT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02735.hp1 HG03927.hp2 HG02280.hp2 HG02735.hp1 HG03927.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0005c0005 a0001c0002 a0005c0005	a0001c0002t0002 a0005c0005t0015 a0001c0002t0002 a0005c0005t0015	a0001c0002t0002g0037 a0001c0002t0002g0100 a0005c0005t0015g0409 a0001c0002t0002g0037 a0001c0002t0002g0100 a0005c0005t0015g0409	3	416	0.0072	-16	c.458 others(33): Show c.458-5946_458-5931delTAAATAAATAAATAAA	GLCCI1	ENSG00000106415.13	transcript	ENST00000223145.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
GLE1_chr9_128499719_128547288	128533427	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	360	0.0028	-16	c.131 others(31): Show c.1313-76_1313-61delAAAAAAAAAAAAAAAA	GLE1	ENSG00000119392.16	transcript	ENST00000309971.9	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr9	TogoVar
GLG1_chr16_74442440_74612114	74468226	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02165.hp1 NA18747.hp2 NA18941.hp2 others(9): Show HG02165.hp1 NA18747.hp2 NA18941.hp2 NA18942.hp1 NA18954.hp1 NA18962.hp1 NA18970.hp1 NA18995.hp2 NA19000.hp2 NA19056.hp2 NA19084.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0012 a0001c0001t0056 a0001c0001t0005 a0001c0001t0012 a0001c0001t0056	a0001c0001t0005g0094 a0001c0001t0005g0104 a0001c0001t0005g0114 others(9): Show a0001c0001t0005g0094 a0001c0001t0005g0104 a0001c0001t0005g0114 a0001c0001t0005g0115 a0001c0001t0005g0119 a0001c0001t0005g0120 a0001c0001t0005g0121 a0001c0001t0005g0122 a0001c0001t0005g0331 a0001c0001t0012g0093 a0001c0001t0012g0113 a0001c0001t0056g0246	12	342	0.0351	-16	c.243 others(33): Show c.2437-394_2437-379delAAAAAAAAAAAAAAAA	GLG1	ENSG00000090863.12	transcript	ENST00000422840.7	protein_coding	17/25			chr16	TogoVar
GLG1_chr16_74442440_74612114	74496713	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0161 a0001c0001t0005g0161	1	342	0.0029	-16	c.775 others(29): Show c.775-85_775-70delGTGTGTGTGTGTGTGT	GLG1	ENSG00000090863.12	transcript	ENST00000422840.7	protein_coding	4/25			chr16	TogoVar
GLG1_chr16_74442440_74612114	74542719	AAGGAAGG others(9): Show AAGGAAGGAAGGAAGGG	A A	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03471.hp1 HG02965.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0053 a0001c0001t0002 a0001c0003t0053	a0001c0001t0002g0291 a0001c0003t0053g0302 a0001c0001t0002g0291 a0001c0003t0053g0302	2	342	0.0059	-16	c.439 others(35): Show c.439-10582_439-10567delCCCTTCCTTCCTTCCT	GLG1	ENSG00000090863.12	transcript	ENST00000422840.7	protein_coding	1/25			chr16	TogoVar
GLG1_chr16_74442440_74612114	74542735	GAGGAAGG others(9): Show GAGGAAGGAAGGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG03486.hp1 HG00738.hp2 HG03486.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0219 a0001c0003t0008g0220 a0001c0003t0008g0219 a0001c0003t0008g0220	2	342	0.0059	-16	c.439 others(35): Show c.439-10598_439-10583delTCCTTCCTTCCTTCCT	GLG1	ENSG00000090863.12	transcript	ENST00000422840.7	protein_coding	1/25			chr16	TogoVar
GLG1_chr16_74442440_74612114	74609442	AGCCTCCC others(9): Show AGCCTCCCAAGTAGATG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0028 a0001c0004t0028	a0001c0004t0028g0187 a0001c0004t0028g0187	1	342	0.0029	-16	c.-23 others(27): Show c.-2364_-2349delCATCTACTTGGGAGGC	GLG1	ENSG00000090863.12	transcript	ENST00000422840.7	protein_coding		2329		chr16	TogoVar
GLI2_chr2_120730868_120997653	120839196	TATATTTG others(9): Show TATATTTGTATATGTTC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02922.hp2 NA19240.hp2 HG01891.hp1 HG02922.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0021 a0001c0003t0011 a0001c0003t0021 a0001c0002t0021 a0001c0003t0011 a0001c0003t0021	a0001c0002t0021g0089 a0001c0003t0011g0018 a0001c0003t0021g0087 a0001c0002t0021g0089 a0001c0003t0011g0018 a0001c0003t0021g0087	3	160	0.0188	-16	c.148 others(35): Show c.148+41743_148+41758delTCATATTTGTATATGT	GLI2	ENSG00000074047.22	transcript	ENST00000361492.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
GLI2_chr2_120730868_120997653	120886159	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0003	a0002c0001t0003g0073 a0002c0001t0003g0073	1	160	0.0063	-16	c.149 others(35): Show c.149-41166_149-41151delTGTGTGTGTGTGTGTG	GLI2	ENSG00000074047.22	transcript	ENST00000361492.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
GLI2_chr2_120730868_120997653	120886195	TGTGTGTG others(9): Show TGTGTGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0003 a0003	a0003c0013 a0003c0013	a0003c0013t0024 a0003c0013t0024	a0003c0013t0024g0107 a0003c0013t0024g0107	1	160	0.0063	-16	c.149 others(35): Show c.149-41161_149-41146delGTGTGTGTGTGCGTGT	GLI2	ENSG00000074047.22	transcript	ENST00000361492.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
GLI2_chr2_120730868_120997653	120886200	GTGTGTGT others(9): Show GTGTGTGTGTGCGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0018 a0001c0003t0011g0018	1	160	0.0063	-16	c.149 others(35): Show c.149-41159_149-41144delGTGTGTGTGCGTGTAT	GLI2	ENSG00000074047.22	transcript	ENST00000361492.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
GLI2_chr2_120730868_120997653	120896696	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00639.hp1 HG00639.hp2 others(64): Show HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp2 HG01071.hp1 HG01071.hp2 HG01106.hp1 HG01109.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01981.hp2 HG02055.hp1 HG02055.hp2 HG02145.hp1 HG02257.hp1 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02630.hp1 HG02683.hp2 HG02717.hp1 HG02818.hp1 HG02895.hp2 HG02896.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03486.hp2 HG03491.hp1 HG03516.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG04184.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18971.hp1 NA18971.hp2 NA18981.hp1 NA18986.hp1 NA19003.hp2 NA19240.hp2 NA20129.hp2 NA20805.hp2 NA21309.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0008 a0009 a0011 a0015	a0001c0002 a0001c0003 a0001c0016 others(14): Show a0001c0002 a0001c0003 a0001c0016 a0001c0020 a0001c0021 a0002c0001 a0002c0004 a0002c0011 a0002c0023 a0003c0005 a0003c0006 a0004c0008 a0005c0010 a0008c0031 a0009c0015 a0011c0019 a0015c0022	a0001c0002t0001 a0001c0002t0005 a0001c0002t0006 others(39): Show a0001c0002t0001 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0008 a0001c0002t0010 a0001c0002t0019 a0001c0002t0049 a0001c0003t0007 a0001c0003t0008 a0001c0003t0010 a0001c0003t0020 a0001c0003t0021 a0001c0003t0039 a0001c0016t0048 a0001c0020t0007 a0001c0021t0004 a0002c0001t0002 a0002c0001t0003 a0002c0001t0004 a0002c0001t0031 a0002c0001t0038 a0002c0001t0044 a0002c0001t0045 a0002c0004t0009 a0002c0004t0012 a0002c0004t0013 a0002c0011t0046 a0002c0023t0004 a0003c0005t0006 a0003c0005t0010 a0003c0006t0001 a0003c0006t0006 a0003c0006t0007 a0004c0008t0005 a0004c0008t0011 a0004c0008t0037 a0005c0010t0003 a0008c0031t0017 a0009c0015t0022 a0011c0019t0001 a0015c0022t0027	a0001c0002t0001g0027 a0001c0002t0001g0040 a0001c0002t0001g0057 others(64): Show a0001c0002t0001g0027 a0001c0002t0001g0040 a0001c0002t0001g0057 a0001c0002t0001g0082 a0001c0002t0001g0091 a0001c0002t0001g0135 a0001c0002t0001g0146 a0001c0002t0005g0007 a0001c0002t0005g0013 a0001c0002t0005g0038 a0001c0002t0005g0050 a0001c0002t0005g0078 a0001c0002t0006g0009 a0001c0002t0007g0055 a0001c0002t0007g0116 a0001c0002t0007g0156 a0001c0002t0008g0101 a0001c0002t0010g0084 a0001c0002t0019g0129 a0001c0002t0019g0134 a0001c0002t0049g0144 a0001c0003t0007g0051 a0001c0003t0008g0022 a0001c0003t0010g0106 a0001c0003t0020g0004 a0001c0003t0021g0087 a0001c0003t0039g0149 a0001c0016t0048g0143 a0001c0020t0007g0154 a0001c0021t0004g0085 a0002c0001t0002g0041 a0002c0001t0002g0046 a0002c0001t0002g0060 a0002c0001t0002g0063 a0002c0001t0002g0071 a0002c0001t0002g0099 a0002c0001t0002g0160 a0002c0001t0003g0037 a0002c0001t0003g0068 a0002c0001t0004g0010 a0002c0001t0004g0045 a0002c0001t0004g0075 a0002c0001t0004g0123 a0002c0001t0031g0065 a0002c0001t0038g0148 a0002c0001t0044g0140 a0002c0001t0045g0142 a0002c0004t0009g0150 a0002c0004t0012g0079 a0002c0004t0013g0125 a0002c0011t0046g0141 a0002c0023t0004g0137 a0003c0005t0006g0155 a0003c0005t0010g0032 a0003c0006t0001g0114 a0003c0006t0006g0005 a0003c0006t0006g0006 a0003c0006t0006g0017 a0003c0006t0007g0002 a0004c0008t0005g0138 a0004c0008t0011g0157 a0004c0008t0037g0054 a0005c0010t0003g0016 a0008c0031t0017g0008 a0009c0015t0022g0096 a0011c0019t0001g0061 a0015c0022t0027g0111	67	160	0.4188	-16	c.149 others(35): Show c.149-30639_149-30624delCACACACACACACACA	GLI2	ENSG00000074047.22	transcript	ENST00000361492.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
GLI3_chr7_41955949_42242209	41968709	GAAAGAAG others(9): Show GAAAGAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0001 a0001c0001t0015g0001	1	158	0.0063	-16	c.210 others(33): Show c.2104-802_2104-787delTCTTTCTTTCTTCTTT	GLI3	ENSG00000106571.15	transcript	ENST00000395925.8	protein_coding	13/14			chr7	TogoVar
GLI3_chr7_41955949_42242209	42182667	TATATATA others(9): Show TATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0017 a0004c0004t0017	a0004c0004t0017g0139 a0004c0004t0017g0139	1	158	0.0063	-16	c.125 others(35): Show c.125-34215_125-34200delGTATATATATATATAT	GLI3	ENSG00000106571.15	transcript	ENST00000395925.8	protein_coding	2/14			chr7	TogoVar
GLI4_chr8_143262445_143281931	143278872	TCCTGGGC others(9): Show TCCTGGGCCAGGCAGGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG02109.hp1 HG02280.hp1 others(17): Show HG01891.hp1 HG02109.hp1 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02615.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp2 HG02922.hp2 HG03130.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 NA19240.hp1 NA19240.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0009 a0003c0004t0002g0012 a0003c0004t0002g0041 others(5): Show a0003c0004t0002g0009 a0003c0004t0002g0012 a0003c0004t0002g0041 a0003c0004t0002g0048 a0003c0004t0002g0050 a0003c0004t0002g0051 a0003c0004t0002g0052 a0003c0004t0002g0075	20	394	0.0508	-16	c.20 others(27): Show c.2069_*2084delCCTGGGCCAGGCAGGG	GLI4	ENSG00000250571.7	transcript	ENST00000340042.2	protein_coding		1942		chr8	TogoVar
GLIPR1_chr12_75475755_75508863	75490195	TCACACAC others(9): Show TCACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0027 a0001c0003t0027	a0001c0003t0027g0183 a0001c0003t0027g0183	1	362	0.0028	-16	c.421 others(31): Show c.421-187_421-172delACACACACACACACAC	GLIPR1	ENSG00000139278.10	transcript	ENST00000266659.8	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr12	TogoVar
GLIS1_chr1_53501239_53744164	53615734	TTCATTTA others(9): Show TTCATTTATTTATTTTA	T T	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0146 a0001c0005t0001g0146	1	236	0.0042	-16	c.260 others(35): Show c.260-15472_260-15457delTAAAATAAATAAATGA	GLIS1	ENSG00000174332.6	transcript	ENST00000628545.2	protein_coding	2/10			chr1	TogoVar
GLIS2_chr16_4311067_4344595	4331541	CTTTAATT others(9): Show CTTTAATTCCTCTAGCG	C C	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0235 a0001c0001t0030g0235	1	395	0.0025	-16	c.-66 others(31): Show c.-66-673_-66-658delTTTAATTCCTCTAGCG	GLIS2	ENSG00000126603.9	transcript	ENST00000433375.2	protein_coding	1/6			chr16	TogoVar
GLIS3_chr9_3819127_4305068	3867718	TGTGTGTG others(9): Show TGTGTGTGTGTGCGTGC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0058 a0003c0004t0006g0058	1	188	0.0053	-16	c.229 others(37): Show c.2298-11550_2298-11535delGCACGCACACACACAC	GLIS3	ENSG00000107249.24	transcript	ENST00000381971.8	protein_coding	8/10			chr9	TogoVar

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