Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GREM2_chr1_240484573_240617155	240616766	ATCTATCT others(9): Show ATCTATCTATCTATCTC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0265 a0001c0001t0002g0265	1	376	0.0027	-16	c.-49 others(27): Show c.-4900_-4885delGAGATAGATAGATAGA	GREM2	ENSG00000180875.5	transcript	ENST00000318160.5	protein_coding		4612		chr1	TogoVar
GRHL1_chr2_9946693_10007277	9951143	CGCGACCG others(9): Show CGCGACCGGGGAGCGCG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0253 a0002c0002t0002g0253	1	418	0.0024	-16	c.-69 others(25): Show c.-690_-675delGCGACCGGGGAGCGCG	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding		549		chr2	TogoVar
GRHL2_chr8_101487439_101674726	101509107	CTCCTTCC others(9): Show CTCCTTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02040.hp2 HG02074.hp1 others(18): Show HG01069.hp2 HG02040.hp2 HG02074.hp1 HG02258.hp2 HG02451.hp2 HG02886.hp2 HG02922.hp2 HG03041.hp2 NA18941.hp1 NA18942.hp2 NA18951.hp2 NA18962.hp2 NA18970.hp2 NA18979.hp2 NA18984.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19058.hp1 NA19070.hp2 NA19087.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0003 a0003c0004 a0001c0001 a0002c0003 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0001t0021 a0002c0003t0002 a0002c0003t0010 a0003c0004t0002 a0003c0004t0053	a0001c0001t0001g0103 a0001c0001t0002g0126 a0001c0001t0002g0180 others(18): Show a0001c0001t0001g0103 a0001c0001t0002g0126 a0001c0001t0002g0180 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0003g0060 a0001c0001t0003g0062 a0001c0001t0003g0185 a0001c0001t0007g0106 a0001c0001t0007g0203 a0001c0001t0008g0104 a0001c0001t0008g0123 a0001c0001t0011g0105 a0001c0001t0016g0306 a0001c0001t0017g0177 a0001c0001t0021g0020 a0002c0003t0002g0178 a0002c0003t0010g0005 a0003c0004t0002g0127 a0003c0004t0002g0186 a0003c0004t0053g0061	21	306	0.0686	-16	c.20+ others(33): Show c.20+16356_20+16371delCCTTCCTTCCTTCCTT	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101559353	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0022 a0001c0001t0006g0022	1	306	0.0033	-16	c.678 others(31): Show c.678+553_678+568delAAAAAAAAAAAAAAAA	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101612481	TTAGATAG others(9): Show TTAGATAGATAGATAGA	T T	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0272 a0002c0003t0002g0272	1	306	0.0033	-16	c.109 others(35): Show c.1099-7031_1099-7016delGATAGATAGATAGATA	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101612508	GATAGATA others(9): Show GATAGATAGATAGATAC	G G	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0078	1	306	0.0033	-16	c.109 others(35): Show c.1099-7027_1099-7012delGATAGATAGATACATA	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101612512	GATAGATA others(9): Show GATAGATAGATACATAC	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01071.hp1 HG01074.hp1 others(3): Show HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01516.hp1 HG01517.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0023 a0001c0001t0004 a0001c0001t0007 a0001c0001t0023	a0001c0001t0004g0082 a0001c0001t0007g0203 a0001c0001t0007g0252 others(3): Show a0001c0001t0004g0082 a0001c0001t0007g0203 a0001c0001t0007g0252 a0001c0001t0007g0253 a0001c0001t0023g0194 a0001c0001t0023g0195	6	306	0.0196	-16	c.109 others(35): Show c.1099-7023_1099-7008delGATAGATACATACATA	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101612516	GATAGATA others(9): Show GATAGATACATACATAC	G G	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00639.hp1 HG01081.hp2 others(40): Show HG00597.hp2 HG00639.hp1 HG01081.hp2 HG01106.hp2 HG01175.hp2 HG01256.hp1 HG01258.hp1 HG01952.hp1 HG02027.hp1 HG02080.hp1 HG02165.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02683.hp2 HG02717.hp1 HG02735.hp2 HG02895.hp2 HG02897.hp1 HG02970.hp1 HG03491.hp2 HG03710.hp1 HG03710.hp2 NA18612.hp1 NA18939.hp2 NA18944.hp1 NA18945.hp1 NA18948.hp2 NA18957.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18995.hp1 NA19001.hp2 NA19002.hp1 NA19004.hp2 NA19011.hp1 NA19030.hp1 NA19054.hp1 NA19075.hp1 NA19079.hp1 NA19086.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0039 a0001c0001t0044 a0001c0001t0055 a0002c0003t0045	a0001c0001t0001g0085 a0001c0001t0001g0133 a0001c0001t0001g0139 others(40): Show a0001c0001t0001g0085 a0001c0001t0001g0133 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0154 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0209 a0001c0001t0001g0220 a0001c0001t0001g0227 a0001c0001t0001g0235 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0257 a0001c0001t0001g0287 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0299 a0001c0001t0001g0301 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0003g0083 a0001c0001t0003g0162 a0001c0001t0004g0025 a0001c0001t0004g0283 a0001c0001t0005g0134 a0001c0001t0007g0110 a0001c0001t0007g0111 a0001c0001t0007g0128 a0001c0001t0014g0035 a0001c0001t0014g0036 a0001c0001t0016g0306 a0001c0001t0017g0132 a0001c0001t0017g0177 a0001c0001t0039g0205 a0001c0001t0044g0292 a0001c0001t0055g0245 a0002c0003t0045g0274	43	306	0.1405	-16	c.109 others(35): Show c.1099-7019_1099-7004delGATACATACATACATA	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101645116	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG03130.hp2 NA18941.hp1 HG01175.hp1 HG03130.hp2 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0012 a0001c0001t0027 a0001c0001t0002 a0001c0001t0012 a0001c0001t0027	a0001c0001t0002g0180 a0001c0001t0012g0238 a0001c0001t0027g0263 a0001c0001t0002g0180 a0001c0001t0012g0238 a0001c0001t0027g0263	3	306	0.0098	-16	c.161 others(33): Show c.1612+913_1612+928delTTTTTTTTTTTTTTTT	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL3_chr1_24314357_24360318	24325756	CCCGGCAA others(9): Show CCCGGCAATTTGCACTT	C C	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0260 a0001c0001t0001g0260	1	372	0.0027	-16	c.18- others(31): Show c.18-5667_18-5652delGGCAATTTGCACTTCC	GRHL3	ENSG00000158055.17	transcript	ENST00000361548.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
GRHL3_chr1_24314357_24360318	24326341	CCCTCCAC others(9): Show CCCTCCACCCCTCTTCT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01496.hp1 HG01993.hp1 others(14): Show HG01192.hp2 HG01496.hp1 HG01993.hp1 HG02300.hp1 HG02602.hp2 HG02723.hp2 HG02809.hp2 HG03239.hp1 HG03540.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp2 HG04228.hp2 NA18964.hp2 NA19011.hp1 NA20905.hp1 NA20905.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0008c0019	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0008c0019t0001	a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0002g0018 others(11): Show a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0302 a0001c0002t0001g0019 a0001c0002t0001g0117 a0001c0002t0001g0119 a0001c0002t0001g0122 a0001c0003t0001g0103 a0001c0003t0001g0121 a0008c0019t0001g0120	17	372	0.0457	-16	c.18- others(31): Show c.18-5041_18-5026delCTTCTCCTCCACCCCT	GRHL3	ENSG00000158055.17	transcript	ENST00000361548.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
GRIA1_chr5_153485670_153818869	153506316	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02615.hp1 NA21309.hp1 HG02615.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0073 a0001c0001t0001g0074	2	194	0.0103	-16	c.220 others(35): Show c.220+12280_220+12295delGTGTGTGTGTGTGTGT	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153576926	TTGGATGG others(9): Show TTGGATGGATGGATGGA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG02280.hp2 others(5): Show HG01167.hp2 HG01169.hp2 HG02280.hp2 HG02572.hp1 HG02818.hp1 HG02965.hp2 HG03579.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0002t0002 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0002t0002 a0001c0003t0001 a0001c0005t0005	a0001c0001t0001g0026 a0001c0001t0001g0079 a0001c0001t0001g0116 others(5): Show a0001c0001t0001g0026 a0001c0001t0001g0079 a0001c0001t0001g0116 a0001c0002t0002g0017 a0001c0003t0001g0018 a0001c0003t0001g0019 a0001c0003t0001g0021 a0001c0005t0005g0020	8	194	0.0412	-16	c.221 others(35): Show c.221-69958_221-69943delATGGATGGATGGATGG	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153590506	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00639.hp1 others(28): Show HG00099.hp2 HG00323.hp1 HG00639.hp1 HG00639.hp2 HG00735.hp1 HG01069.hp2 HG01099.hp1 HG01109.hp1 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01256.hp1 HG01346.hp2 HG01358.hp1 HG01433.hp1 HG01515.hp1 HG01891.hp2 HG01934.hp1 HG02074.hp2 HG02135.hp1 HG02280.hp1 HG03239.hp1 HG03239.hp2 HG03654.hp2 HG03831.hp1 HG04228.hp2 NA18612.hp1 NA18985.hp2 NA19030.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0014 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(28): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0041 a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0068 a0001c0001t0001g0077 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0110 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0134 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0194 a0001c0001t0002g0042 a0001c0001t0002g0145 a0001c0001t0010g0152 a0001c0001t0014g0047 a0001c0002t0001g0015 a0001c0002t0001g0043 a0001c0002t0001g0049 a0001c0002t0001g0053 a0001c0002t0001g0054 a0001c0002t0002g0087	31	194	0.1598	-16	c.221 others(35): Show c.221-56390_221-56375delGTGTGTGTGTGTGTGT	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153778111	GGAGGGAG others(9): Show GGAGGGAGGTTGGGAGT	G G	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0069	1	194	0.0052	-16	c.227 others(35): Show c.2270+7712_2270+7727delTGAGGGAGGTTGGGAG	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153804724	AATTAATT others(9): Show AATTAATTAATTTATTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01255.hp1 HG01433.hp1 others(14): Show HG00639.hp2 HG01255.hp1 HG01433.hp1 HG01993.hp1 HG02280.hp2 HG02486.hp1 HG02615.hp2 HG02683.hp2 HG02965.hp2 HG03130.hp2 HG03490.hp2 HG03710.hp2 HG03942.hp1 HG04199.hp1 NA18522.hp2 NA19030.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0002 a0001c0005t0005 a0001c0006t0007	a0001c0001t0001g0013 a0001c0001t0001g0063 a0001c0001t0001g0068 others(14): Show a0001c0001t0001g0013 a0001c0001t0001g0063 a0001c0001t0001g0068 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0002g0042 a0001c0001t0002g0109 a0001c0001t0002g0135 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0005g0193 a0001c0002t0002g0087 a0001c0005t0005g0020 a0001c0005t0005g0050 a0001c0006t0007g0025	17	194	0.0876	-16	c.252 others(35): Show c.2520+2238_2520+2253delAATTAATTTATTTATT	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153804728	AATTAATT others(9): Show AATTAATTTATTTATTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00609.hp1 others(93): Show HG00099.hp1 HG00323.hp2 HG00609.hp1 HG01069.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp1 HG01192.hp2 HG01257.hp1 HG01257.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01515.hp2 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp2 HG01943.hp1 HG01981.hp1 HG01981.hp2 HG02040.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02451.hp1 HG02486.hp2 HG02572.hp2 HG02615.hp1 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02818.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18948.hp2 NA18965.hp1 NA18965.hp2 NA18972.hp1 NA18983.hp1 NA18985.hp2 NA19030.hp2 NA19065.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0008 a0001c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0011 a0001c0001t0015 a0001c0002t0001 a0001c0002t0002 a0001c0004t0001 a0001c0005t0006 a0001c0007t0001 a0001c0008t0001 a0001c0010t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(93): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0014 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0099 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0143 a0001c0001t0001g0148 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0186 a0001c0001t0002g0039 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0128 a0001c0001t0003g0091 a0001c0001t0003g0126 a0001c0001t0003g0162 a0001c0001t0004g0023 a0001c0001t0004g0032 a0001c0001t0004g0129 a0001c0001t0008g0188 a0001c0001t0011g0061 a0001c0001t0015g0107 a0001c0002t0001g0029 a0001c0002t0001g0053 a0001c0002t0001g0071 a0001c0002t0001g0088 a0001c0002t0001g0096 a0001c0002t0001g0118 a0001c0002t0001g0191 a0001c0002t0002g0017 a0001c0004t0001g0037 a0001c0004t0001g0038 a0001c0005t0006g0065 a0001c0007t0001g0030 a0001c0007t0001g0164 a0001c0008t0001g0012 a0001c0010t0001g0184	96	194	0.4949	-16	c.252 others(35): Show c.2520+2242_2520+2257delAATTTATTTATTTATT	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153804732	AATTTATT others(9): Show AATTTATTTATTTATTT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01167.hp2 HG01169.hp2 others(15): Show HG00642.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG02055.hp1 HG02258.hp1 HG02258.hp2 HG02559.hp2 HG02572.hp1 HG02886.hp2 HG03098.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0003t0013	a0001c0001t0001g0010 a0001c0001t0001g0031 a0001c0001t0001g0048 others(15): Show a0001c0001t0001g0010 a0001c0001t0001g0031 a0001c0001t0001g0048 a0001c0001t0001g0062 a0001c0001t0001g0069 a0001c0001t0001g0086 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0139 a0001c0001t0001g0150 a0001c0002t0001g0044 a0001c0002t0001g0190 a0001c0003t0001g0018 a0001c0003t0001g0019 a0001c0003t0001g0021 a0001c0003t0001g0151 a0001c0003t0001g0187 a0001c0003t0013g0185	18	194	0.0928	-16	c.252 others(35): Show c.2520+2263_2520+2278delATTTATTTATTTATTT	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA2_chr4_157215728_157371075	157248780	CTATATAT others(9): Show CTATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00738.hp2 HG01070.hp1 others(3): Show HG00733.hp2 HG00738.hp2 HG01070.hp1 HG01109.hp2 HG01891.hp1 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0022 others(3): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0002g0023	6	216	0.0278	-16	c.229 others(35): Show c.229+26992_229+27007delTATATATATATATATA	GRIA2	ENSG00000120251.22	transcript	ENST00000264426.14	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRIA2_chr4_157215728_157371075	157338008	GTATATAT others(9): Show GTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0063 a0001c0001t0003g0063	1	216	0.0046	-16	c.184 others(35): Show c.1844+1288_1844+1303delTATATATATATATATA	GRIA2	ENSG00000120251.22	transcript	ENST00000264426.14	protein_coding	11/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRIA3_chrX_123179278_123495915	123345439	AACACACA others(9): Show AACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02040.hp1 NA18953.hp1 NA18988.hp1 others(2): Show HG02040.hp1 NA18953.hp1 NA18988.hp1 NA19000.hp1 NA19063.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0001 a0001c0002t0003	a0001c0002t0001g0006 a0001c0002t0001g0033 a0001c0002t0001g0100 others(2): Show a0001c0002t0001g0006 a0001c0002t0001g0033 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0003g0092	5	207	0.0242	-16	c.697 others(33): Show c.697-9430_697-9415delACACACACACACACAC	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	4/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123413532	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0203 a0001c0002t0004g0203	1	207	0.0048	-16	c.150 others(35): Show c.1501-3847_1501-3832delAAAAAAAAAAAAAAAA	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	10/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123463603	GGAGGGAG others(9): Show GGAGGGAGGGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG03688.hp1 NA18612.hp1 NA20752.hp1 HG03688.hp1 NA18612.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0088 a0001c0001t0001g0147 a0001c0002t0001g0157 a0001c0001t0001g0088 a0001c0001t0001g0147 a0001c0002t0001g0157	3	207	0.0145	-16	c.207 others(35): Show c.2077-1259_2077-1244delGGGAGGGAAAGAAAGA	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	12/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123463607	GGAGGGAA others(9): Show GGAGGGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG02717.hp1 NA18982.hp1 HG01070.hp2 HG02717.hp1 NA18982.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0004 a0001c0001t0002 a0001c0002t0004	a0001c0001t0002g0020 a0001c0002t0004g0089 a0001c0002t0004g0173 a0001c0001t0002g0020 a0001c0002t0004g0089 a0001c0002t0004g0173	3	207	0.0145	-16	c.207 others(35): Show c.2077-1255_2077-1240delGGGAAAGAAAGAAAGA	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	12/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123463611	GGAAAGAA others(9): Show GGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0062 a0001c0002t0013g0062	1	207	0.0048	-16	c.207 others(35): Show c.2077-1195_2077-1180delAAGAAAGAAAGAAAGA	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	12/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA4_chr11_105605073_105987090	105623053	GTATATAT others(9): Show GTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00609.hp1 HG01109.hp1 others(25): Show HG00280.hp2 HG00609.hp1 HG01109.hp1 HG01243.hp1 HG01928.hp1 HG02055.hp2 HG02083.hp2 HG02145.hp1 HG02451.hp2 HG02572.hp2 HG02647.hp1 HG02717.hp2 HG02818.hp1 HG02970.hp2 HG03225.hp1 HG03540.hp1 HG03540.hp2 NA18522.hp1 NA18906.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp2 NA18960.hp2 NA18961.hp2 NA19000.hp2 NA19007.hp1 NA19063.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0001c0001t0036 a0001c0001t0040 a0001c0002t0006 a0001c0002t0012 a0001c0002t0042 a0001c0003t0002	a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0070 others(25): Show a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0070 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0002g0048 a0001c0001t0003g0131 a0001c0001t0003g0132 a0001c0001t0003g0154 a0001c0001t0003g0184 a0001c0001t0004g0036 a0001c0001t0005g0017 a0001c0001t0009g0095 a0001c0001t0010g0134 a0001c0001t0010g0139 a0001c0001t0011g0130 a0001c0001t0011g0136 a0001c0001t0013g0129 a0001c0001t0013g0147 a0001c0001t0016g0133 a0001c0001t0017g0160 a0001c0001t0036g0135 a0001c0001t0040g0180 a0001c0002t0006g0168 a0001c0002t0006g0178 a0001c0002t0012g0100 a0001c0002t0042g0047 a0001c0003t0002g0018	28	184	0.1522	-16	c.247 others(35): Show c.247+10642_247+10657delTATATATATATATATA	GRIA4	ENSG00000152578.15	transcript	ENST00000282499.10	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIA4_chr11_105605073_105987090	105629248	AAAATAAA others(9): Show AAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00408.hp1 others(89): Show HG00099.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00741.hp1 HG01071.hp1 HG01071.hp2 HG01109.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01346.hp2 HG01358.hp2 HG01884.hp1 HG02055.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02145.hp2 HG02165.hp2 HG02258.hp2 HG02451.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03579.hp1 HG03579.hp2 HG03942.hp2 HG04115.hp1 HG04199.hp2 HG06807.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18953.hp2 NA18954.hp2 NA18955.hp1 NA18960.hp1 NA18961.hp1 NA18964.hp1 NA18970.hp1 NA18971.hp2 NA18973.hp1 NA18983.hp1 NA18983.hp2 NA18995.hp2 NA19000.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19058.hp2 NA19063.hp1 NA19077.hp1 NA19077.hp2 NA19084.hp1 NA19084.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0007 a0004c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(34): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 a0001c0001t0018 a0001c0001t0023 a0001c0001t0024 a0001c0001t0028 a0001c0001t0029 a0001c0001t0031 a0001c0001t0032 a0001c0001t0035 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0048 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0001t0054 a0001c0002t0006 a0001c0002t0008 a0001c0002t0012 a0001c0002t0020 a0001c0002t0021 a0001c0002t0041 a0001c0002t0043 a0001c0003t0002 a0001c0006t0049 a0001c0007t0003 a0004c0008t0020	a0001c0001t0001g0019 a0001c0001t0001g0059 a0001c0001t0001g0060 others(89): Show a0001c0001t0001g0019 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0094 a0001c0001t0001g0126 a0001c0001t0001g0138 a0001c0001t0001g0149 a0001c0001t0001g0170 a0001c0001t0002g0002 a0001c0001t0002g0014 a0001c0001t0002g0020 a0001c0001t0002g0057 a0001c0001t0002g0069 a0001c0001t0002g0092 a0001c0001t0002g0148 a0001c0001t0002g0156 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0062 a0001c0001t0003g0077 a0001c0001t0003g0084 a0001c0001t0003g0088 a0001c0001t0003g0090 a0001c0001t0003g0093 a0001c0001t0003g0102 a0001c0001t0003g0154 a0001c0001t0003g0158 a0001c0001t0004g0055 a0001c0001t0004g0063 a0001c0001t0004g0073 a0001c0001t0004g0074 a0001c0001t0004g0075 a0001c0001t0004g0181 a0001c0001t0004g0182 a0001c0001t0005g0064 a0001c0001t0005g0065 a0001c0001t0005g0066 a0001c0001t0005g0080 a0001c0001t0005g0096 a0001c0001t0005g0152 a0001c0001t0007g0054 a0001c0001t0007g0157 a0001c0001t0009g0167 a0001c0001t0010g0021 a0001c0001t0015g0171 a0001c0001t0018g0022 a0001c0001t0018g0076 a0001c0001t0023g0150 a0001c0001t0023g0151 a0001c0001t0024g0006 a0001c0001t0024g0007 a0001c0001t0028g0058 a0001c0001t0029g0155 a0001c0001t0031g0179 a0001c0001t0032g0023 a0001c0001t0035g0085 a0001c0001t0044g0083 a0001c0001t0045g0174 a0001c0001t0046g0011 a0001c0001t0048g0004 a0001c0001t0050g0010 a0001c0001t0051g0012 a0001c0001t0052g0009 a0001c0001t0053g0013 a0001c0001t0054g0005 a0001c0002t0006g0029 a0001c0002t0006g0078 a0001c0002t0006g0079 a0001c0002t0006g0125 a0001c0002t0006g0178 a0001c0002t0008g0030 a0001c0002t0008g0031 a0001c0002t0008g0032 a0001c0002t0008g0033 a0001c0002t0008g0034 a0001c0002t0012g0061 a0001c0002t0012g0081 a0001c0002t0012g0082 a0001c0002t0020g0173 a0001c0002t0021g0103 a0001c0002t0041g0028 a0001c0002t0043g0056 a0001c0003t0002g0183 a0001c0006t0049g0008 a0001c0007t0003g0049 a0004c0008t0020g0146	92	184	0.5000	-16	c.247 others(35): Show c.247+16844_247+16859delAATAAATAAATAAATA	GRIA4	ENSG00000152578.15	transcript	ENST00000282499.10	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIA4_chr11_105605073_105987090	105634468	GGAAAGAA others(9): Show GGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0014 a0001c0001t0002g0014	1	184	0.0054	-16	c.247 others(35): Show c.247+22066_247+22081delAGAAAGAAAGAAAGAA	GRIA4	ENSG00000152578.15	transcript	ENST00000282499.10	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIA4_chr11_105605073_105987090	105688144	CTATATCT others(9): Show CTATATCTATATCTCTA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02630.hp1 HG03516.hp2 others(1): Show HG02451.hp1 HG02630.hp1 HG03516.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0025 a0001c0001t0026 a0001c0001t0039 others(1): Show a0001c0001t0025 a0001c0001t0026 a0001c0001t0039 a0001c0002t0020	a0001c0001t0025g0027 a0001c0001t0026g0026 a0001c0001t0039g0172 others(1): Show a0001c0001t0025g0027 a0001c0001t0026g0026 a0001c0001t0039g0172 a0001c0002t0020g0173	4	184	0.0217	-16	c.248 others(35): Show c.248-64835_248-64820delATATCTATATCTCTAT	GRIA4	ENSG00000152578.15	transcript	ENST00000282499.10	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIA4_chr11_105605073_105987090	105688146	ATATCTAT others(9): Show ATATCTATATCTCTATC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp1 HG02895.hp1 others(1): Show HG02109.hp1 HG02486.hp1 HG02895.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0007 a0001c0001t0013 others(1): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0013 a0001c0002t0008	a0001c0001t0002g0176 a0001c0001t0007g0153 a0001c0001t0013g0129 others(1): Show a0001c0001t0002g0176 a0001c0001t0007g0153 a0001c0001t0013g0129 a0001c0002t0008g0030	4	184	0.0217	-16	c.248 others(35): Show c.248-64827_248-64812delATCTCTATCTATCTAT	GRIA4	ENSG00000152578.15	transcript	ENST00000282499.10	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIA4_chr11_105605073_105987090	105794469	GTATGTAT others(9): Show GTATGTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02145.hp1 HG02970.hp2 others(1): Show HG01243.hp1 HG02145.hp1 HG02970.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0016 a0001c0001t0003 a0001c0001t0016	a0001c0001t0003g0131 a0001c0001t0003g0132 a0001c0001t0003g0184 others(1): Show a0001c0001t0003g0131 a0001c0001t0003g0132 a0001c0001t0003g0184 a0001c0001t0016g0133	4	184	0.0217	-16	c.487 others(35): Show c.487+41253_487+41268delGTATATATATATATAT	GRIA4	ENSG00000152578.15	transcript	ENST00000282499.10	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRID1_chr10_85594552_86371795	85631985	GCACACAC others(9): Show GCACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01516.hp2 HG02451.hp2 others(6): Show HG01109.hp2 HG01516.hp2 HG02451.hp2 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG03225.hp1 HG03540.hp1 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0002c0005	a0001c0001t0008 a0001c0001t0019 a0001c0002t0004 others(4): Show a0001c0001t0008 a0001c0001t0019 a0001c0002t0004 a0001c0002t0036 a0001c0004t0004 a0001c0004t0008 a0002c0005t0022	a0001c0001t0008g0016 a0001c0001t0019g0041 a0001c0002t0004g0067 others(6): Show a0001c0001t0008g0016 a0001c0001t0019g0041 a0001c0002t0004g0067 a0001c0002t0004g0069 a0001c0002t0004g0084 a0001c0002t0036g0093 a0001c0004t0004g0070 a0001c0004t0008g0072 a0002c0005t0022g0078	9	96	0.0938	-16	c.219 others(37): Show c.2194-11968_2194-11953delTGTGTGTGTGTGTGTG	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	13/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	85694550	GTATATAT others(9): Show GTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01516.hp2 HG01891.hp1 others(3): Show HG01109.hp1 HG01516.hp2 HG01891.hp1 HG02451.hp2 HG02572.hp1 HG02897.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0011 others(1): Show a0001c0001 a0001c0002 a0001c0011 a0002c0007	a0001c0001t0019 a0001c0002t0015 a0001c0002t0035 others(3): Show a0001c0001t0019 a0001c0002t0015 a0001c0002t0035 a0001c0002t0036 a0001c0011t0006 a0002c0007t0027	a0001c0001t0019g0041 a0001c0002t0015g0057 a0001c0002t0035g0095 others(3): Show a0001c0001t0019g0041 a0001c0002t0015g0057 a0001c0002t0035g0095 a0001c0002t0036g0093 a0001c0011t0006g0068 a0002c0007t0027g0054	6	96	0.0625	-16	c.199 others(37): Show c.1997+28437_1997+28452delTATATATATATATATA	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	12/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	85819967	GAGGAAGG others(9): Show GAGGAAGGAAGGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0045 a0002c0005t0045	a0002c0005t0045g0062 a0002c0005t0045g0062	1	96	0.0104	-16	c.123 others(37): Show c.1233+34513_1233+34528delTCCTTCCTTCCTTCCT	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	8/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	85820015	AAGGAAGG others(9): Show AAGGAAGGAAGGAAGGC	A A	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02970.hp1 NA19043.hp2 others(1): Show HG02896.hp1 HG02970.hp1 NA19043.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0003 a0001c0002t0003 a0001c0003t0018 others(1): Show a0001c0001t0003 a0001c0002t0003 a0001c0003t0018 a0001c0004t0003	a0001c0001t0003g0055 a0001c0002t0003g0089 a0001c0003t0018g0002 others(1): Show a0001c0001t0003g0055 a0001c0002t0003g0089 a0001c0003t0018g0002 a0001c0004t0003g0076	4	96	0.0417	-16	c.123 others(37): Show c.1233+34465_1233+34480delGCCTTCCTTCCTTCCT	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	8/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	85820027	AAGGCAGG others(9): Show AAGGCAGGCAGGCAGGC	A A	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0014 a0001c0001t0009g0014	1	96	0.0104	-16	c.123 others(37): Show c.1233+34453_1233+34468delGCCTGCCTGCCTGCCT	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	8/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	85820063	CAGGCAGG others(9): Show CAGGCAGGAAGGCAGGT	C C	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0027 a0002c0007t0027	a0002c0007t0027g0054 a0002c0007t0027g0054	1	96	0.0104	-16	c.123 others(37): Show c.1233+34417_1233+34432delACCTGCCTTCCTGCCT	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	8/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	85865955	GGAGAGAG others(9): Show GGAGAGAGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG03490.hp2 HG03492.hp1 others(1): Show HG01516.hp1 HG03490.hp2 HG03492.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0008 a0001c0001 a0001c0002 a0001c0008	a0001c0001t0016 a0001c0002t0003 a0001c0008t0046 a0001c0001t0016 a0001c0002t0003 a0001c0008t0046	a0001c0001t0016g0042 a0001c0001t0016g0043 a0001c0002t0003g0060 others(1): Show a0001c0001t0016g0042 a0001c0001t0016g0043 a0001c0002t0003g0060 a0001c0008t0046g0018	4	96	0.0417	-16	c.951 others(33): Show c.951+3039_951+3054delTCTCTCTCTCTCTCTC	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	6/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	86170660	AACACACC others(9): Show AACACACCCACACACAT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0028 a0002c0007t0028	a0002c0007t0028g0051 a0002c0007t0028g0051	1	96	0.0104	-16	c.521 others(35): Show c.521-31652_521-31637delATGTGTGTGGGTGTGT	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	3/15			chr10	TogoVar
GRID1_chr10_85594552_86371795	86296784	CACATACA others(9): Show CACATACATACATACAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02280.hp2 HG02451.hp2 others(8): Show HG01884.hp1 HG02280.hp2 HG02451.hp2 HG02572.hp2 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG03225.hp2 HG03540.hp1 HG03540.hp2 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0005 a0001c0001 a0001c0002 a0002c0005	a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 others(8): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0002t0004 a0001c0002t0006 a0001c0002t0011 a0001c0002t0036 a0001c0002t0042 a0001c0002t0053 a0002c0005t0022 a0002c0005t0023	a0001c0001t0002g0017 a0001c0001t0005g0015 a0001c0001t0008g0016 others(8): Show a0001c0001t0002g0017 a0001c0001t0005g0015 a0001c0001t0008g0016 a0001c0002t0004g0084 a0001c0002t0006g0087 a0001c0002t0011g0079 a0001c0002t0036g0093 a0001c0002t0042g0080 a0001c0002t0053g0096 a0002c0005t0022g0078 a0002c0005t0023g0081	11	96	0.1146	-16	c.235 others(35): Show c.235+67141_235+67156delATGTATGTATGTATGT	GRID1	ENSG00000182771.19	transcript	ENST00000327946.12	protein_coding	2/15			chr10	TogoVar
GRID2IP_chr7_6491778_6556461	6493145	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp2 HG01515.hp2 HG01993.hp2 others(9): Show HG01192.hp2 HG01515.hp2 HG01993.hp2 HG02129.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp1 HG04199.hp2 NA18906.hp2 NA18973.hp2 NA18983.hp1 NA21309.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0010 a0029	a0001c0002 a0001c0003 a0001c0004 others(4): Show a0001c0002 a0001c0003 a0001c0004 a0002c0001 a0004c0007 a0010c0032 a0029c0056	a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 others(6): Show a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0002c0001t0001 a0002c0001t0002 a0004c0007t0003 a0010c0032t0002 a0029c0056t0001	a0001c0002t0001g0087 a0001c0002t0002g0078 a0001c0003t0001g0232 others(9): Show a0001c0002t0001g0087 a0001c0002t0002g0078 a0001c0003t0001g0232 a0001c0004t0001g0160 a0002c0001t0001g0320 a0002c0001t0002g0297 a0002c0001t0002g0298 a0002c0001t0002g0317 a0004c0007t0003g0133 a0010c0032t0002g0321 a0010c0032t0002g0326 a0029c0056t0001g0186	12	366	0.0328	-16	c.46 others(27): Show c.4613_*4628delACACACACACACACAC	GRID2IP	ENSG00000215045.9	transcript	ENST00000457091.3	protein_coding		3632		chr7	TogoVar
GRID2IP_chr7_6491778_6556461	6493196	GTGTGTGT others(9): Show GTGTGTGTGTGTGTGTA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG03130.hp1 HG02630.hp2 HG03130.hp1	a0001 a0009 a0001 a0009	a0001c0017 a0009c0045 a0001c0017 a0009c0045	a0001c0017t0004 a0009c0045t0012 a0001c0017t0004 a0009c0045t0012	a0001c0017t0004g0086 a0009c0045t0012g0112 a0001c0017t0004g0086 a0009c0045t0012g0112	2	366	0.0055	-16	c.45 others(27): Show c.4562_*4577delTACACACACACACACA	GRID2IP	ENSG00000215045.9	transcript	ENST00000457091.3	protein_coding		3581		chr7	TogoVar
GRID2_chr4_92298966_93779566	92384433	AATATATA others(9): Show AATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02922.hp2 NA18906.hp1 NA19030.hp2 HG02922.hp2 NA18906.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0010 a0001c0001t0001g0034 a0002c0003t0001g0033 a0001c0001t0001g0010 a0001c0001t0001g0034 a0002c0003t0001g0033	3	34	0.0882	-16	c.88+ others(33): Show c.88+79720_88+79735delATATATATATATATAT	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRID2_chr4_92298966_93779566	92408431	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	34	0.0294	-16	c.88+ others(35): Show c.88+103704_88+103719delTTTTTTTTTTTTTTTT	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRID2_chr4_92298966_93779566	92415740	GTATATAT others(9): Show GTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp2 HG03041.hp1 HG03041.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0007 a0001c0001 a0003c0007	a0001c0001t0001 a0003c0007t0005 a0001c0001t0001 a0003c0007t0005	a0001c0001t0001g0001 a0003c0007t0005g0013 a0001c0001t0001g0001 a0003c0007t0005g0013	2	34	0.0588	-16	c.88+ others(35): Show c.88+111022_88+111037delATATATATATATATAT	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRID2_chr4_92298966_93779566	92448131	TTATGTAT others(9): Show TTATGTATGTATGTATG	T T	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0010	1	34	0.0294	-16	c.89- others(35): Show c.89-141964_89-141949delGTATGTATGTATGTAT	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRID2_chr4_92298966_93779566	92482019	TATATATA others(9): Show TATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	1	34	0.0294	-16	c.89- others(35): Show c.89-108110_89-108095delTATATATATATATAAA	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRID2_chr4_92298966_93779566	92485334	ATATATAT others(9): Show ATATATATATATATAGT	A A	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	34	0.0294	-16	c.89- others(35): Show c.89-104796_89-104781delTATATATATATATAGT	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	1/15			chr4	TogoVar
GRID2_chr4_92298966_93779566	92586355	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01496.hp1 HG01978.hp1 others(1): Show HG01192.hp2 HG01496.hp1 HG01978.hp1 NA18942.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0002t0001	a0001c0001t0001g0006 a0001c0001t0004g0031 a0001c0001t0006g0020 others(1): Show a0001c0001t0001g0006 a0001c0001t0004g0031 a0001c0001t0006g0020 a0001c0002t0001g0004	4	34	0.1177	-16	c.89- others(31): Show c.89-3752_89-3737delCACACACACACACACA	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRID2_chr4_92298966_93779566	92611132	ATGTGTGT others(9): Show ATGTGTGTGTGTGCATG	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA20129.hp2 HG02055.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0007 a0001c0001t0001 a0001c0004t0007	a0001c0001t0001g0016 a0001c0004t0007g0028 a0001c0001t0001g0016 a0001c0004t0007g0028	2	34	0.0588	-16	c.244 others(35): Show c.244+20859_244+20874delCATGTGTGTGTGTGTG	GRID2	ENSG00000152208.13	transcript	ENST00000282020.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr4	TogoVar

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