Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GSG1L_chr16_27782528_28068714	27946575	AAGAAAGA others(9): Show AAGAAAGAGAGAGAGAG	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 NA18906.hp1 HG02258.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0103 a0001c0001t0009g0234 a0001c0001t0001g0103 a0001c0001t0009g0234	2	240	0.0083	-16	c.397 others(35): Show c.397+16565_397+16580delCTCTCTCTCTCTTTCT	GSG1L	ENSG00000169181.13	transcript	ENST00000447459.7	protein_coding	2/6			chr16	TogoVar
GSG1L_chr16_27782528_28068714	27947540	GGAAAGAA others(9): Show GGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03540.hp2 NA18995.hp1 others(1): Show HG03139.hp2 HG03540.hp2 NA18995.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0009 a0001c0002t0032 a0001c0001t0002 a0001c0002t0009 a0001c0002t0032	a0001c0001t0002g0057 a0001c0001t0002g0195 a0001c0002t0009g0012 others(1): Show a0001c0001t0002g0057 a0001c0001t0002g0195 a0001c0002t0009g0012 a0001c0002t0032g0229	4	240	0.0167	-16	c.397 others(35): Show c.397+15600_397+15615delTTTCTTTCTTTCTTTC	GSG1L	ENSG00000169181.13	transcript	ENST00000447459.7	protein_coding	2/6			chr16	TogoVar
GSG1L_chr16_27782528_28068714	27947585	GAAAGAAA others(9): Show GAAAGAAAGAAAGAAAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0167 a0001c0001t0001g0167	1	240	0.0042	-16	c.397 others(35): Show c.397+15555_397+15570delTTTTCTTTCTTTCTTT	GSG1L	ENSG00000169181.13	transcript	ENST00000447459.7	protein_coding	2/6			chr16	TogoVar
GSG1L_chr16_27782528_28068714	27955912	GGAAGGAA others(9): Show GGAAGGAAGGAAGGAAA	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02559.hp1 HG02886.hp2 others(4): Show HG02258.hp1 HG02559.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG03453.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0014 a0001c0001t0045	a0001c0001t0002g0047 a0001c0001t0002g0159 a0001c0001t0004g0067 others(4): Show a0001c0001t0002g0047 a0001c0001t0002g0159 a0001c0001t0004g0067 a0001c0001t0009g0234 a0001c0001t0014g0019 a0001c0001t0014g0020 a0001c0001t0045g0175	7	240	0.0292	-16	c.397 others(33): Show c.397+7228_397+7243delTTTCCTTCCTTCCTTC	GSG1L	ENSG00000169181.13	transcript	ENST00000447459.7	protein_coding	2/6			chr16	TogoVar
GSG1_chr12_13078532_13108667	13081949	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0071	1	448	0.0022	-16	c.29 others(27): Show c.2936_*2951delAAAAAAAAAAAAAAAA	GSG1	ENSG00000111305.19	transcript	ENST00000651961.1	protein_coding		1582		chr12	TogoVar
GSG1_chr12_13078532_13108667	13098456	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0164	1	448	0.0022	-16	c.48+ others(31): Show c.48+4993_48+5008delAAAAAAAAAAAAAAAA	GSG1	ENSG00000111305.19	transcript	ENST00000651961.1	protein_coding	1/6			chr12	TogoVar
GSK3B_chr3_119816321_120099447	119865458	ATATATAT others(9): Show ATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02630.hp2 HG01175.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0037 a0001c0001t0014 a0001c0001t0037	a0001c0001t0014g0027 a0001c0001t0037g0026 a0001c0001t0014g0027 a0001c0001t0037g0026	2	300	0.0067	-16	c.910 others(33): Show c.910-1869_910-1854delAAAAAAAATATATATA	GSK3B	ENSG00000082701.17	transcript	ENST00000264235.13	protein_coding	8/10			chr3	TogoVar
GSK3B_chr3_119816321_120099447	119875498	GACACACA others(9): Show GACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0076 a0001c0001t0006g0076	1	300	0.0033	-16	c.909 others(31): Show c.909+899_909+914delGTGTGTGTGTGTGTGT	GSK3B	ENSG00000082701.17	transcript	ENST00000264235.13	protein_coding	8/10			chr3	TogoVar
GSK3B_chr3_119816321_120099447	119922212	AGGAAGGA others(9): Show AGGAAGGAAGGAAGGAG	A A	intron_variant intron_variant	MODIFIER	NA19068.hp1 NA19070.hp2 NA19080.hp2 NA19068.hp1 NA19070.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164	3	300	0.0100	-16	c.477 others(33): Show c.477+1145_477+1160delCTCCTTCCTTCCTTCC	GSK3B	ENSG00000082701.17	transcript	ENST00000264235.13	protein_coding	4/10			chr3	TogoVar
GSK3B_chr3_119816321_120099447	119967828	TTCTCTTT others(9): Show TTCTCTTTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01192.hp1 HG01243.hp2 others(37): Show HG00609.hp1 HG01192.hp1 HG01243.hp2 HG01261.hp2 HG01433.hp1 HG01884.hp1 HG01891.hp2 HG02055.hp2 HG02074.hp2 HG02129.hp1 HG02135.hp1 HG02165.hp1 HG02258.hp1 HG02280.hp1 HG02486.hp1 HG02647.hp2 HG02717.hp2 HG02809.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG03139.hp1 HG03225.hp2 HG03516.hp1 HG04228.hp1 NA18946.hp1 NA18951.hp1 NA18954.hp2 NA18984.hp1 NA18986.hp2 NA19010.hp2 NA19043.hp1 NA19057.hp2 NA19065.hp1 NA20752.hp1 NA20805.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0006 a0003c0008 a0001c0001 a0001c0006 a0003c0008	a0001c0001t0003 a0001c0001t0010 a0001c0001t0015 others(10): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0015 a0001c0001t0018 a0001c0001t0020 a0001c0001t0024 a0001c0001t0025 a0001c0001t0040 a0001c0001t0042 a0001c0001t0052 a0001c0001t0054 a0001c0006t0003 a0003c0008t0043	a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0034 others(37): Show a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0034 a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0039 a0001c0001t0003g0041 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0044 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0067 a0001c0001t0010g0018 a0001c0001t0010g0019 a0001c0001t0010g0020 a0001c0001t0010g0021 a0001c0001t0010g0022 a0001c0001t0015g0080 a0001c0001t0015g0081 a0001c0001t0015g0083 a0001c0001t0018g0208 a0001c0001t0018g0209 a0001c0001t0018g0210 a0001c0001t0020g0220 a0001c0001t0024g0032 a0001c0001t0024g0033 a0001c0001t0025g0038 a0001c0001t0025g0040 a0001c0001t0040g0054 a0001c0001t0042g0053 a0001c0001t0052g0051 a0001c0001t0054g0211 a0001c0006t0003g0029 a0003c0008t0043g0045	40	300	0.1333	-16	c.283 others(35): Show c.283-20493_283-20478delGAGAGAGAGAAAGAGA	GSK3B	ENSG00000082701.17	transcript	ENST00000264235.13	protein_coding	2/10			chr3	TogoVar
GSK3B_chr3_119816321_120099447	120026512	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01346.hp2 NA18963.hp2 others(2): Show HG01255.hp1 HG01346.hp2 NA18963.hp2 NA18992.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0280 others(2): Show a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0280 a0001c0001t0002g0285 a0001c0001t0002g0288	5	300	0.0167	-16	c.89- others(33): Show c.89-24289_89-24274delGTGTGTGTGTGTGTGT	GSK3B	ENSG00000082701.17	transcript	ENST00000264235.13	protein_coding	1/10			chr3	TogoVar
GSK3B_chr3_119816321_120099447	120079305	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG02647.hp1 HG01346.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0059 a0001c0001t0067 a0001c0001t0059 a0001c0001t0067	a0001c0001t0059g0295 a0001c0001t0067g0300 a0001c0001t0059g0295 a0001c0001t0067g0300	2	300	0.0067	-16	c.88+ others(33): Show c.88+14026_88+14041delGTGTGTGTGTGTGTGT	GSK3B	ENSG00000082701.17	transcript	ENST00000264235.13	protein_coding	1/10			chr3	TogoVar
GSN_chr9_121263162_121337842	121283671	GTTCATTC others(9): Show GTTCATTCATTCATTCA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00408.hp1 others(95): Show HG00140.hp2 HG00280.hp1 HG00408.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00735.hp1 HG00741.hp1 HG01070.hp2 HG01074.hp2 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01256.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01516.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp2 HG01993.hp1 HG02056.hp2 HG02071.hp1 HG02083.hp1 HG02129.hp1 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02698.hp1 HG02738.hp2 HG03017.hp1 HG03490.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03710.hp1 HG03834.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18944.hp2 NA18945.hp1 NA18949.hp2 NA18952.hp2 NA18953.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp2 NA18967.hp2 NA18969.hp1 NA18971.hp1 NA18975.hp1 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18988.hp1 NA18990.hp1 NA18991.hp1 NA18993.hp1 NA18997.hp1 NA18999.hp2 NA19003.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19058.hp2 NA19062.hp1 NA19066.hp2 NA19067.hp1 NA19070.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0003 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0003t0001 a0001c0004t0002	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 others(78): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0003g0027 a0001c0001t0003g0149 a0001c0001t0003g0152 a0001c0001t0003g0163 a0001c0003t0001g0130 a0001c0003t0001g0132 a0001c0003t0001g0134 a0001c0003t0001g0151 a0001c0003t0001g0170 a0001c0004t0002g0044 a0001c0004t0002g0045 a0001c0004t0002g0123 a0001c0004t0002g0140 a0001c0004t0002g0156 a0001c0004t0002g0172 a0001c0004t0002g0175	98	322	0.3044	-16	c.-10 others(33): Show c.-10+2131_-10+2146delTCATTCATTCATTCAT	GSN	ENSG00000148180.22	transcript	ENST00000432226.7	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr9	TogoVar
GSN_chr9_121263162_121337842	121334772	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(153): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00738.hp2 HG00741.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp2 HG01975.hp2 HG01981.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02293.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp2 HG03516.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp2 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18949.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18964.hp1 NA18967.hp1 NA18969.hp1 NA18971.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18988.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18997.hp1 NA18999.hp1 NA18999.hp2 NA19003.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19084.hp1 NA20129.hp1 NA20752.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0007 others(5): Show a0001 a0002 a0007 a0009 a0010 a0013 a0014 a0015	a0001c0001 a0002c0007 a0007c0018 others(5): Show a0001c0001 a0002c0007 a0007c0018 a0009c0012 a0010c0013 a0013c0021 a0014c0017 a0015c0016	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0002c0007t0001 a0007c0018t0001 a0009c0012t0001 a0010c0013t0001 a0013c0021t0001 a0014c0017t0001 a0015c0016t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 others(126): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0094 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0196 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0001g0212 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0003g0017 a0001c0001t0003g0027 a0001c0001t0003g0109 a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0149 a0001c0001t0003g0152 a0001c0001t0003g0163 a0001c0001t0003g0233 a0001c0001t0006g0030 a0002c0007t0001g0049 a0002c0007t0001g0056 a0002c0007t0001g0061 a0002c0007t0001g0065 a0002c0007t0001g0072 a0007c0018t0001g0091 a0009c0012t0001g0098 a0009c0012t0001g0102 a0010c0013t0001g0261 a0013c0021t0001g0108 a0014c0017t0001g0090 a0015c0016t0001g0260	156	322	0.4845	-16	c.21 others(27): Show c.2170_*2185delTGTGTGTGTGTGTGTG	GSN	ENSG00000148180.22	transcript	ENST00000432226.7	protein_coding		1931		chr9	TogoVar
GSPT1_chr16_11863128_11920956	11874454	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0140 a0001c0001t0010g0140	1	372	0.0027	-16	c.186 others(35): Show c.1861+1291_1862-1284delAAAAAAAAAAAAAAAA	GSPT1	ENSG00000103342.13	transcript	ENST00000434724.7	protein_coding	14/14			chr16	TogoVar
GSR_chr8_30673066_30732846	30684928	CATTTATT others(9): Show CATTTATTTATTTATTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00408.hp2 others(72): Show HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp1 HG01069.hp1 HG01109.hp2 HG01169.hp1 HG01169.hp2 HG01255.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01891.hp1 HG01978.hp2 HG02004.hp1 HG02015.hp1 HG02040.hp2 HG02056.hp2 HG02145.hp1 HG02486.hp2 HG02602.hp1 HG02735.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp2 HG03139.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03710.hp1 HG03831.hp1 HG04199.hp1 HG04228.hp1 NA18906.hp1 NA18945.hp2 NA18955.hp1 NA18962.hp1 NA18968.hp1 NA18972.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA19062.hp1 NA19063.hp2 NA19081.hp2 NA19088.hp1 NA20805.hp1 NA20905.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0003 a0001c0009 others(2): Show a0001c0001 a0001c0003 a0001c0009 a0002c0002 a0004c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(20): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0010 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0023 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0029 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0003t0012 a0001c0003t0025 a0001c0009t0001 a0002c0002t0001 a0002c0002t0019 a0002c0002t0023 a0004c0005t0050	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(71): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0029 a0001c0001t0001g0052 a0001c0001t0001g0057 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0109 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0146 a0001c0001t0001g0156 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0171 a0001c0001t0001g0175 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0244 a0001c0001t0001g0252 a0001c0001t0001g0270 a0001c0001t0001g0299 a0001c0001t0003g0285 a0001c0001t0003g0304 a0001c0001t0004g0078 a0001c0001t0004g0083 a0001c0001t0004g0092 a0001c0001t0004g0158 a0001c0001t0005g0315 a0001c0001t0010g0035 a0001c0001t0010g0248 a0001c0001t0015g0066 a0001c0001t0015g0154 a0001c0001t0018g0077 a0001c0001t0019g0073 a0001c0001t0019g0111 a0001c0001t0023g0118 a0001c0001t0024g0212 a0001c0001t0024g0213 a0001c0001t0026g0243 a0001c0001t0027g0129 a0001c0001t0029g0032 a0001c0001t0032g0031 a0001c0001t0033g0049 a0001c0001t0034g0159 a0001c0003t0012g0012 a0001c0003t0025g0009 a0001c0003t0025g0010 a0001c0009t0001g0027 a0002c0002t0001g0324 a0002c0002t0001g0325 a0002c0002t0001g0326 a0002c0002t0001g0327 a0002c0002t0001g0335 a0002c0002t0001g0337 a0002c0002t0001g0340 a0002c0002t0019g0321 a0002c0002t0023g0338 a0004c0005t0050g0346	75	348	0.2155	-16	c.104 others(33): Show c.1042-745_1042-730delAAATAAATAAATAAAT	GSR	ENSG00000104687.14	transcript	ENST00000221130.11	protein_coding	9/12			chr8	TogoVar
GSTA1_chr6_52786371_52808816	52796455	CTATATAT others(9): Show CTATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00558.hp2 HG00733.hp2 others(22): Show HG00099.hp1 HG00558.hp2 HG00733.hp2 HG01074.hp1 HG01168.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp2 HG01346.hp1 HG01496.hp2 HG01928.hp1 HG01993.hp2 HG02523.hp1 HG02602.hp1 HG02738.hp1 HG03239.hp2 HG03654.hp1 HG03654.hp2 HG03831.hp1 HG03927.hp1 HG04184.hp2 HG04228.hp1 NA19056.hp2 NA19085.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0020 a0001c0002t0002g0028 a0001c0002t0002g0029 others(10): Show a0001c0002t0002g0020 a0001c0002t0002g0028 a0001c0002t0002g0029 a0001c0002t0002g0030 a0001c0002t0002g0053 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0163 a0001c0002t0002g0165 a0001c0002t0002g0169 a0001c0002t0002g0171 a0001c0002t0002g0172 a0001c0002t0002g0180	25	436	0.0573	-16	c.140 others(31): Show c.140-157_140-142delTATATATATATATATA	GSTA1	ENSG00000243955.6	transcript	ENST00000334575.6	protein_coding	3/6			chr6	TogoVar
GSTCD_chr4_105703784_105852725	105705513	GCCAAAAA others(9): Show GCCAAAAAGGTTGTGGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp1 HG01243.hp1 HG03098.hp2 others(2): Show HG00735.hp1 HG01243.hp1 HG03098.hp2 HG03453.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0015 a0001c0001t0005 a0001c0001t0015	a0001c0001t0005g0180 a0001c0001t0005g0181 a0001c0001t0005g0182 others(2): Show a0001c0001t0005g0180 a0001c0001t0005g0181 a0001c0001t0005g0182 a0001c0001t0005g0184 a0001c0001t0015g0183	5	186	0.0269	-16	c.-35 others(27): Show c.-3524_-3509delCCAAAAAGGTTGTGGA	GSTCD	ENSG00000138780.15	transcript	ENST00000515279.6	protein_coding		3270		chr4	TogoVar
GSTCD_chr4_105703784_105852725	105755056	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01167.hp1 HG01515.hp2 HG00280.hp2 HG01167.hp1 HG01515.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0039 a0001c0001t0005g0174 a0001c0001t0005g0175 a0001c0001t0001g0039 a0001c0001t0005g0174 a0001c0001t0005g0175	3	186	0.0161	-16	c.124 others(37): Show c.1240+25585_1240+25600delAAAAAAAAAAAAAAAA	GSTCD	ENSG00000138780.15	transcript	ENST00000515279.6	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GSTCD_chr4_105703784_105852725	105755241	CAAGGTAG others(9): Show CAAGGTAGGAAGGTAGA	C C	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0078 a0001c0001t0004g0078	1	186	0.0054	-16	c.124 others(37): Show c.1240+25755_1240+25770delTAGAAAGGTAGGAAGG	GSTCD	ENSG00000138780.15	transcript	ENST00000515279.6	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GSTCD_chr4_105703784_105852725	105794821	TTTTATCT others(9): Show TTTTATCTATCTATCTA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01192.hp1 HG01891.hp2 others(10): Show HG01109.hp1 HG01192.hp1 HG01891.hp2 HG02896.hp1 HG02896.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03516.hp1 HG06807.hp1 NA18959.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003	a0001c0001t0003 a0001c0001t0009 a0001c0002t0002 others(2): Show a0001c0001t0003 a0001c0001t0009 a0001c0002t0002 a0001c0005t0021 a0002c0003t0010	a0001c0001t0003g0121 a0001c0001t0003g0124 a0001c0001t0003g0128 others(10): Show a0001c0001t0003g0121 a0001c0001t0003g0124 a0001c0001t0003g0128 a0001c0001t0003g0134 a0001c0001t0009g0141 a0001c0001t0009g0142 a0001c0002t0002g0079 a0001c0002t0002g0080 a0001c0002t0002g0081 a0001c0002t0002g0084 a0001c0002t0002g0097 a0001c0005t0021g0091 a0002c0003t0010g0144	13	186	0.0699	-16	c.124 others(37): Show c.1241-28115_1241-28100delTTATCTATCTATCTAT	GSTCD	ENSG00000138780.15	transcript	ENST00000515279.6	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GSTCD_chr4_105703784_105852725	105794839	TTATCTAT others(9): Show TTATCTATCTATCTATC	T T	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0068 a0001c0001t0003g0068	1	186	0.0054	-16	c.124 others(37): Show c.1241-28075_1241-28060delCTATCTATCTATCTAT	GSTCD	ENSG00000138780.15	transcript	ENST00000515279.6	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GSTM2_chr1_109663057_109680286	109664341	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	356	0.0028	-16	c.-37 others(27): Show c.-3774_-3759delTTTTTTTTTTTTTTTT	GSTM2	ENSG00000213366.13	transcript	ENST00000241337.9	protein_coding		3715		chr1	TogoVar
GSTM4_chr1_109651099_109666700	109654081	AAAGAAAG others(9): Show AAAGAAAGAAAGAAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp2 HG02647.hp1 NA18991.hp2 HG00621.hp2 HG02647.hp1 NA18991.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0004 a0001c0001t0002 a0002c0003t0004	a0001c0001t0002g0003 a0001c0001t0002g0021 a0002c0003t0004g0001 a0001c0001t0002g0003 a0001c0001t0002g0021 a0002c0003t0004g0001	3	364	0.0082	-16	c.-23 others(27): Show c.-2308_-2293delAAGAAAGAAAGAAAAG	GSTM4	ENSG00000168765.19	transcript	ENST00000369836.9	protein_coding		2017		chr1	TogoVar
GSTM4_chr1_109651099_109666700	109654093	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0058 a0001c0002t0006g0058	1	364	0.0028	-16	c.-22 others(27): Show c.-2296_-2281delAAAGAAAGAAAGAAAG	GSTM4	ENSG00000168765.19	transcript	ENST00000369836.9	protein_coding		2005		chr1	TogoVar
GSTM4_chr1_109651099_109666700	109654126	AAAGAAAG others(9): Show AAAGAAAGAAAGAAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG02809.hp1 HG01891.hp1 HG02809.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0004 a0001c0002t0001g0035 a0001c0002t0001g0004 a0001c0002t0001g0035	2	364	0.0055	-16	c.-22 others(27): Show c.-2263_-2248delAAGAAAGAAAGAAAAG	GSTM4	ENSG00000168765.19	transcript	ENST00000369836.9	protein_coding		1972		chr1	TogoVar
GSTM4_chr1_109651099_109666700	109654130	AAAGAAAG others(9): Show AAAGAAAGAAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18966.hp2 NA19087.hp1 NA18966.hp2 NA19087.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0019 a0001c0002t0001g0019	2	364	0.0055	-16	c.-22 others(27): Show c.-2259_-2244delAAGAAAGAAAAGAAAG	GSTM4	ENSG00000168765.19	transcript	ENST00000369836.9	protein_coding		1968		chr1	TogoVar
GSTM4_chr1_109651099_109666700	109654134	AAAGAAAA others(9): Show AAAGAAAAGAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0012 a0001c0002t0015g0012	1	364	0.0028	-16	c.-22 others(27): Show c.-2255_-2240delAAGAAAAGAAAGAAAG	GSTM4	ENSG00000168765.19	transcript	ENST00000369836.9	protein_coding		1964		chr1	TogoVar
GSTO2_chr10_104264184_104309950	104272587	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02055.hp2 HG02258.hp2 others(4): Show HG01109.hp2 HG02055.hp2 HG02258.hp2 HG02717.hp2 HG03209.hp1 NA18522.hp2 NA18961.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0002c0001 a0001c0004 a0002c0001	a0001c0004t0007 a0001c0004t0050 a0001c0004t0051 others(1): Show a0001c0004t0007 a0001c0004t0050 a0001c0004t0051 a0002c0001t0001	a0001c0004t0007g0002 a0001c0004t0007g0054 a0001c0004t0007g0055 others(3): Show a0001c0004t0007g0002 a0001c0004t0007g0054 a0001c0004t0007g0055 a0001c0004t0050g0002 a0001c0004t0051g0053 a0002c0001t0001g0137	7	300	0.0233	-16	c.-23 others(35): Show c.-231-2069_-231-2054delTTTTTTTTTTTTTTTT	GSTO2	ENSG00000065621.15	transcript	ENST00000338595.7	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
GSTO2_chr10_104264184_104309950	104306054	TGCGCGCG others(9): Show TGCGCGCGCGCGCGCGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02056.hp2 HG02622.hp1 HG02922.hp2 others(12): Show HG02056.hp2 HG02622.hp1 HG02922.hp2 NA18959.hp1 NA18961.hp2 NA18964.hp2 NA18972.hp1 NA18975.hp1 NA18988.hp2 NA18992.hp2 NA19002.hp2 NA19012.hp2 NA19060.hp1 NA19065.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0005 a0001c0002 a0001c0003 a0002c0005	a0001c0002t0036 a0001c0002t0041 a0001c0003t0003 others(3): Show a0001c0002t0036 a0001c0002t0041 a0001c0003t0003 a0001c0003t0008 a0001c0003t0012 a0002c0005t0003	a0001c0002t0036g0037 a0001c0002t0041g0014 a0001c0003t0003g0004 others(11): Show a0001c0002t0036g0037 a0001c0002t0041g0014 a0001c0003t0003g0004 a0001c0003t0003g0017 a0001c0003t0003g0066 a0001c0003t0003g0068 a0001c0003t0003g0072 a0001c0003t0003g0073 a0001c0003t0008g0237 a0001c0003t0008g0238 a0001c0003t0008g0240 a0001c0003t0012g0003 a0001c0003t0012g0065 a0002c0005t0003g0219	15	300	0.0500	-16	c.67 others(27): Show c.6771_*6786delGCGCGCGCGCGCGCGC	GSTO2	ENSG00000065621.15	transcript	ENST00000338595.7	protein_coding		1105		chr10	TogoVar
GSX2_chr4_54095163_54107498	54107416	CAAGAGAG others(9): Show CAAGAGAGAGAGAGAGA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0003	1	372	0.0027	-16	c.54 others(27): Show c.5495_*5510delAAGAGAGAGAGAGAGA	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding		4919		chr4	TogoVar
GTDC1_chr2_143933068_144337512	144019435	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0036 a0001c0003t0036	a0001c0003t0036g0106 a0001c0003t0036g0106	1	124	0.0081	-16	c.522 others(35): Show c.522-11916_522-11901delACACACACACACACAC	GTDC1	ENSG00000121964.15	transcript	ENST00000682281.1	protein_coding	6/11			chr2	TogoVar
GTDC1_chr2_143933068_144337512	144145983	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02886.hp2 HG02922.hp1 HG02647.hp2 HG02886.hp2 HG02922.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0012 a0001c0001 a0005c0012	a0001c0001t0001 a0001c0001t0003 a0005c0012t0003 a0001c0001t0001 a0001c0001t0003 a0005c0012t0003	a0001c0001t0001g0008 a0001c0001t0003g0003 a0005c0012t0003g0120 a0001c0001t0001g0008 a0001c0001t0003g0003 a0005c0012t0003g0120	3	124	0.0242	-16	c.180 others(31): Show c.180-260_180-245delTTTTTTTTTTTTTTTT	GTDC1	ENSG00000121964.15	transcript	ENST00000682281.1	protein_coding	4/11			chr2	TogoVar
GTDC1_chr2_143933068_144337512	144317384	TGGAAGGA others(9): Show TGGAAGGAAGGAAGGAA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0060 a0002c0002t0001g0060	1	124	0.0081	-16	c.-15 others(37): Show c.-151+15039_-151+15054delTTCCTTCCTTCCTTCC	GTDC1	ENSG00000121964.15	transcript	ENST00000682281.1	protein_coding	1/11			chr2	TogoVar
GTF2A1L_chr2_48612856_48684604	48682346	GTTTCTCC others(9): Show GTTTCTCCTCCCTTCCC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0061 a0001c0003t0001g0061	1	344	0.0029	-16	c.29 others(27): Show c.2905_*2920delTTTCTCCTCCCTTCCC	GTF2A1L	ENSG00000242441.8	transcript	ENST00000403751.8	protein_coding		2743		chr2	TogoVar
GTF2A1_chr14_81170452_81225959	81207139	GTACCTAC others(9): Show GTACCTACCTACCTACC	G G	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02922.hp1 HG03139.hp1 HG02280.hp2 HG02922.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0019 a0001c0001t0006g0060 a0001c0001t0006g0019 a0001c0001t0006g0060	3	350	0.0086	-16	c.133 others(33): Show c.133-3051_133-3036delGGTAGGTAGGTAGGTA	GTF2A1	ENSG00000165417.12	transcript	ENST00000553612.6	protein_coding	2/8			chr14	TogoVar
GTF2E2_chr8_30573318_30663236	30659582	GTATATAG others(9): Show GTATATAGATAGATAGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0125 a0001c0001t0005g0125	1	378	0.0027	-16	c.-16 others(27): Show c.-1630_-1615delTCTATCTATCTATATA	GTF2E2	ENSG00000197265.9	transcript	ENST00000355904.9	protein_coding		1347		chr8	TogoVar
GTF2E2_chr8_30573318_30663236	30659585	TATAGATA others(9): Show TATAGATAGATAGATAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02074.hp2 HG02280.hp1 HG02280.hp2 others(6): Show HG02074.hp2 HG02280.hp1 HG02280.hp2 HG02572.hp2 HG03098.hp1 HG03579.hp1 HG06807.hp2 NA18522.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0104 a0001c0001t0001g0164 others(6): Show a0001c0001t0001g0004 a0001c0001t0001g0104 a0001c0001t0001g0164 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0190 a0001c0001t0001g0216 a0001c0001t0001g0243	9	378	0.0238	-16	c.-16 others(27): Show c.-1633_-1618delCTATCTATCTATCTAT	GTF2E2	ENSG00000197265.9	transcript	ENST00000355904.9	protein_coding		1350		chr8	TogoVar
GTF2F1_chr19_6374572_6398164	6385294	CTGAGGCA others(9): Show CTGAGGCAGAATCGCTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00733.hp2 HG02148.hp2 others(2): Show HG00280.hp1 HG00733.hp2 HG02148.hp2 HG02300.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0166 a0001c0001t0007g0167 a0001c0001t0007g0168 others(2): Show a0001c0001t0007g0166 a0001c0001t0007g0167 a0001c0001t0007g0168 a0001c0001t0007g0169 a0001c0001t0007g0170	5	378	0.0132	-16	c.498 others(33): Show c.498-1815_498-1800delAAGCGATTCTGCCTCA	GTF2F1	ENSG00000125651.14	transcript	ENST00000394456.10	protein_coding	5/12			chr19	TogoVar
GTF2F2_chr13_45115510_45289893	45127938	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03704.hp1 NA18954.hp1 NA18962.hp1 others(1): Show HG03704.hp1 NA18954.hp1 NA18962.hp1 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0017 others(1): Show a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0002t0001g0106	4	210	0.0191	-16	c.66+ others(31): Show c.66+7233_66+7248delTTTTTTTTTTTTTTTT	GTF2F2	ENSG00000188342.13	transcript	ENST00000340473.8	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GTF2F2_chr13_45115510_45289893	45245666	AATATATA others(9): Show AATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0210 a0001c0001t0005g0210	1	210	0.0048	-16	c.387 others(33): Show c.387-7185_387-7170delTATATATATATATATA	GTF2F2	ENSG00000188342.13	transcript	ENST00000340473.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GTF2H2C_chr5_69555191_69600221	69597401	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01928.hp1 HG02132.hp2 HG03225.hp2 others(3): Show HG01928.hp1 HG02132.hp2 HG03225.hp2 HG03704.hp2 NA19066.hp1 NA19066.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0045 a0001c0001t0046 a0002c0003t0006 others(2): Show a0001c0001t0045 a0001c0001t0046 a0002c0003t0006 a0002c0003t0080 a0002c0003t0081	a0001c0001t0045g0036 a0001c0001t0046g0107 a0002c0003t0006g0010 others(3): Show a0001c0001t0045g0036 a0001c0001t0046g0107 a0002c0003t0006g0010 a0002c0003t0006g0108 a0002c0003t0080g0112 a0002c0003t0081g0111	6	167	0.0359	-16	c.52 others(27): Show c.5204_*5219delTTTTTTTTTTTTTTTT	GTF2H2C	ENSG00000183474.16	transcript	ENST00000380729.8	protein_coding		2181		chr5	TogoVar
GTF2H5_chr6_158163350_158204344	158201363	TTTTGTGT others(9): Show TTTTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0099 a0001c0001t0099	a0001c0001t0099g0197 a0001c0001t0099g0197	1	384	0.0026	-16	c.92 others(27): Show c.9207_*9222delTTTGTGTGTGTGTGTG	GTF2H5	ENSG00000272047.4	transcript	ENST00000607778.2	protein_coding		2020		chr6	TogoVar
GTF2H5_chr6_158163350_158204344	158201365	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02723.hp2 HG03486.hp1 HG02723.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0036 a0001c0001t0018 a0001c0001t0036	a0001c0001t0018g0015 a0001c0001t0036g0285 a0001c0001t0018g0015 a0001c0001t0036g0285	2	384	0.0052	-16	c.92 others(27): Show c.9209_*9224delTGTGTGTGTGTGTGTG	GTF2H5	ENSG00000272047.4	transcript	ENST00000607778.2	protein_coding		2022		chr6	TogoVar
GTF2IRD1_chr7_74448906_74607605	74448986	CCCCTCCC others(9): Show CCCCTCCCTCCCTCCCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00423.hp2 HG00438.hp1 others(26): Show HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00738.hp2 HG01346.hp1 HG01433.hp2 HG01496.hp1 HG01928.hp1 HG01975.hp1 HG01978.hp1 HG02015.hp1 HG02040.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG03239.hp2 HG04184.hp2 HG04199.hp2 NA18939.hp1 NA18946.hp1 NA18964.hp2 NA18975.hp1 NA18984.hp1 NA18989.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp2 NA19085.hp1 NA20905.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0002c0003 others(1): Show a0001c0001 a0002c0002 a0002c0003 a0004c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0002t0001 a0002c0002t0003 a0002c0003t0003 a0004c0013t0001	a0001c0001t0001g0035 a0001c0001t0001g0047 a0001c0001t0001g0048 others(26): Show a0001c0001t0001g0035 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0126 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0163 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0002g0023 a0001c0001t0003g0003 a0001c0001t0003g0040 a0001c0001t0003g0050 a0001c0001t0003g0149 a0002c0002t0001g0005 a0002c0002t0001g0162 a0002c0002t0003g0127 a0002c0003t0003g0156 a0004c0013t0001g0045	29	262	0.1107	-16	c.-51 others(27): Show c.-5196_-5181delCCCTCCCTCCCTCCCT	GTF2IRD1	ENSG00000006704.11	transcript	ENST00000424337.7	protein_coding		4919		chr7	TogoVar
GTF2IRD1_chr7_74448906_74607605	74468676	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(34): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00423.hp1 HG00639.hp1 HG00642.hp2 HG00735.hp2 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01109.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01928.hp2 HG01981.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02615.hp1 HG03098.hp2 HG03490.hp2 HG03491.hp1 HG04204.hp2 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18993.hp1 NA19005.hp1 NA19007.hp2 NA19043.hp2 NA19056.hp1 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0012 a0001c0016 others(6): Show a0001c0001 a0001c0012 a0001c0016 a0002c0003 a0002c0004 a0002c0005 a0002c0006 a0002c0007 a0002c0008	a0001c0001t0001 a0001c0001t0002 a0001c0012t0001 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0012t0001 a0001c0016t0001 a0002c0003t0001 a0002c0003t0002 a0002c0003t0003 a0002c0003t0011 a0002c0004t0002 a0002c0005t0001 a0002c0006t0002 a0002c0007t0001 a0002c0008t0001 a0002c0008t0008	a0001c0001t0001g0025 a0001c0001t0001g0183 a0001c0001t0001g0227 others(34): Show a0001c0001t0001g0025 a0001c0001t0001g0183 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0232 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0252 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0182 a0001c0012t0001g0229 a0001c0012t0001g0233 a0001c0016t0001g0249 a0002c0003t0001g0222 a0002c0003t0001g0223 a0002c0003t0001g0226 a0002c0003t0001g0230 a0002c0003t0001g0231 a0002c0003t0001g0235 a0002c0003t0001g0250 a0002c0003t0001g0251 a0002c0003t0002g0238 a0002c0003t0002g0246 a0002c0003t0003g0234 a0002c0003t0003g0236 a0002c0003t0011g0256 a0002c0004t0002g0181 a0002c0005t0001g0255 a0002c0006t0002g0215 a0002c0007t0001g0225 a0002c0007t0001g0237 a0002c0008t0001g0253 a0002c0008t0001g0254 a0002c0008t0008g0207	37	262	0.1412	-16	c.-7+ others(33): Show c.-7+14532_-7+14547delGTGTGTGTGTGTGTGT	GTF2IRD1	ENSG00000006704.11	transcript	ENST00000424337.7	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr7	TogoVar
GTF2IRD1_chr7_74448906_74607605	74528943	GTGGATGG others(9): Show GTGGATGGATGGATGGA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp1 HG01081.hp2 others(5): Show HG00280.hp2 HG00323.hp1 HG01081.hp2 HG01934.hp1 HG02080.hp2 HG02559.hp1 NA18985.hp2 NA19011.hp1	a0001 a0002 a0001 a0002	a0001c0017 a0001c0020 a0002c0007 a0001c0017 a0001c0020 a0002c0007	a0001c0017t0001 a0001c0020t0004 a0002c0007t0001 a0001c0017t0001 a0001c0020t0004 a0002c0007t0001	a0001c0017t0001g0051 a0001c0020t0004g0208 a0002c0007t0001g0037 others(5): Show a0001c0017t0001g0051 a0001c0020t0004g0208 a0002c0007t0001g0037 a0002c0007t0001g0061 a0002c0007t0001g0090 a0002c0007t0001g0104 a0002c0007t0001g0225 a0002c0007t0001g0237	8	262	0.0305	-16	c.109 others(33): Show c.1091-761_1091-746delGGATGGATGGATGGAT	GTF2IRD1	ENSG00000006704.11	transcript	ENST00000424337.7	protein_coding	8/26		INFO_REALIGN_3_PRIME	chr7	TogoVar
GTF2IRD2B_chr7_75087590_75154817	75119937	GCTAACGT others(9): Show GCTAACGTGGTGAAACC	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00673.hp2 HG00733.hp1 others(48): Show HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00741.hp1 HG01070.hp1 HG01109.hp1 HG01258.hp2 HG01496.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp2 HG02055.hp2 HG02074.hp1 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02451.hp2 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp2 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03225.hp1 HG03453.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 NA18522.hp1 NA18747.hp2 NA18906.hp2 NA18988.hp2 NA19004.hp2 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19240.hp1 NA19240.hp2 NA20752.hp1 NA20905.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0009	a0001c0001 a0001c0004 a0002c0002 others(5): Show a0001c0001 a0001c0004 a0002c0002 a0003c0003 a0003c0009 a0003c0011 a0004c0006 a0009c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0004t0001 a0002c0002t0002 a0003c0003t0001 a0003c0009t0001 a0003c0011t0001 a0004c0006t0001 a0009c0007t0002	a0001c0001t0001g0039 a0001c0001t0001g0150 a0001c0001t0002g0164 others(48): Show a0001c0001t0001g0039 a0001c0001t0001g0150 a0001c0001t0002g0164 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0085 a0001c0001t0004g0045 a0001c0001t0004g0057 a0001c0001t0009g0013 a0001c0001t0010g0148 a0001c0004t0001g0005 a0001c0004t0001g0054 a0001c0004t0001g0096 a0001c0004t0001g0098 a0001c0004t0001g0147 a0002c0002t0002g0152 a0002c0002t0002g0153 a0002c0002t0002g0154 a0002c0002t0002g0155 a0002c0002t0002g0156 a0002c0002t0002g0157 a0002c0002t0002g0158 a0002c0002t0002g0159 a0002c0002t0002g0160 a0002c0002t0002g0161 a0002c0002t0002g0162 a0002c0002t0002g0163 a0002c0002t0002g0165 a0002c0002t0002g0167 a0002c0002t0002g0168 a0002c0002t0002g0169 a0003c0003t0001g0030 a0003c0003t0001g0031 a0003c0003t0001g0033 a0003c0003t0001g0034 a0003c0003t0001g0035 a0003c0003t0001g0140 a0003c0009t0001g0032 a0003c0011t0001g0037 a0004c0006t0001g0067 a0004c0006t0001g0068 a0009c0007t0002g0166	51	170	0.3000	-16	c.239 others(31): Show c.239-952_239-937delTAACGTGGTGAAACCC	GTF2IRD2B	ENSG00000174428.19	transcript	ENST00000472837.7	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
GTF2I_chr7_74652718_74765692	74653927	TAGCTTGG others(9): Show TAGCTTGGCCAAGGCCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0160 a0001c0001t0002g0160	1	174	0.0058	-16	c.-41 others(27): Show c.-4146_-4131delAGCTTGGCCAAGGCCC	GTF2I	ENSG00000263001.8	transcript	ENST00000573035.6	protein_coding		3790		chr7	TogoVar
GTF2I_chr7_74652718_74765692	74691188	TTTTCTTT others(9): Show TTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG02895.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0005 a0001c0001t0001g0006	2	174	0.0115	-16	c.238 others(30): Show c.238+85_238+100delCTTTCTTTCTTTCTTT	GTF2I	ENSG00000263001.8	transcript	ENST00000573035.6	protein_coding	3/34		INFO_REALIGN_3_PRIME	chr7	TogoVar

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