Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CIB3_chr19_16156368_16178525	16173310	AGAACCAG others(9): Show AGAACCAGGAACCCAGG	A A	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0202 a0001c0001t0001g0202	1	378	0.0027	-16	c.51+ others(28): Show c.51+99_51+114delCCTGGGTTCCTGGTTC	CIB3	ENSG00000141977.9	transcript	ENST00000269878.8	protein_coding	1/5			chr19	TogoVar
CIB4_chr2_26576205_26646366	26588967	GCCGCTTC others(9): Show GCCGCTTCTTCTTTCTT	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG04199.hp2 HG00323.hp2 HG04199.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0006 a0002c0002t0002 a0002c0002t0006	a0002c0002t0002g0089 a0002c0002t0006g0216 a0002c0002t0002g0089 a0002c0002t0006g0216	2	344	0.0058	-16	c.329 others(33): Show c.329-5085_329-5070delAAGAAAGAAGAAGCGG	CIB4	ENSG00000157884.11	transcript	ENST00000288861.5	protein_coding	4/6			chr2	TogoVar
CIDEA_chr18_12249361_12282595	12252610	TTATCTAT others(9): Show TTATCTATCTATCTATC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0139 a0002c0002t0001g0139	1	448	0.0022	-16	c.-17 others(27): Show c.-1773_-1758delTATCTATCTATCTATC	CIDEA	ENSG00000176194.18	transcript	ENST00000320477.10	protein_coding		1750		chr18	TogoVar
CIDEC_chr3_9861714_9885253	9883168	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp2 HG02622.hp2 HG02630.hp1 others(5): Show HG02559.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG03471.hp1 HG03579.hp2 NA19011.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002	a0001c0001t0003g0004 a0001c0001t0003g0078 a0001c0002t0001g0054 others(5): Show a0001c0001t0003g0004 a0001c0001t0003g0078 a0001c0002t0001g0054 a0001c0002t0001g0204 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0052 a0001c0002t0002g0053	8	410	0.0195	-16	c.-30 others(27): Show c.-3099_-3084delAAAAAAAAAAAAAAAA	CIDEC	ENSG00000187288.12	transcript	ENST00000336832.7	protein_coding		2916		chr3	TogoVar
CILP2_chr19_19533265_19551659	19534240	CAGAGACA others(9): Show CAGAGACAAATGGAGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG02145.hp1 HG02257.hp2 others(24): Show HG01884.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02886.hp1 HG02896.hp1 HG02976.hp1 HG03041.hp1 HG03098.hp2 HG03195.hp2 HG03453.hp2 HG03516.hp2 HG03540.hp2 NA19043.hp2	a0001 a0013 a0001 a0013	a0001c0002 a0001c0004 a0013c0020 a0001c0002 a0001c0004 a0013c0020	a0001c0002t0002 a0001c0004t0001 a0013c0020t0002 a0001c0002t0002 a0001c0004t0001 a0013c0020t0002	a0001c0002t0002g0003 a0001c0002t0002g0011 a0001c0002t0002g0015 others(6): Show a0001c0002t0002g0003 a0001c0002t0002g0011 a0001c0002t0002g0015 a0001c0002t0002g0016 a0001c0002t0002g0019 a0001c0002t0002g0028 a0001c0002t0002g0029 a0001c0004t0001g0015 a0013c0020t0002g0011	27	352	0.0767	-16	c.-41 others(27): Show c.-4109_-4094delAGAGACAAATGGAGAG	CILP2	ENSG00000160161.9	transcript	ENST00000291495.5	protein_coding		4024		chr19	TogoVar
CILP2_chr19_19533265_19551659	19534551	CACACAGA others(9): Show CACACAGAGAGACAGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	352	0.0028	-16	c.-37 others(27): Show c.-3798_-3783delACACAGAGAGACAGAG	CILP2	ENSG00000160161.9	transcript	ENST00000291495.5	protein_coding		3713		chr19	TogoVar
CIP2A_chr3_108544864_108594438	108553894	TATAAAAA others(9): Show TATAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0098 a0001c0001t0001g0098	1	372	0.0027	-16	c.232 others(33): Show c.2325-180_2325-165delTTTTTTTTTTTTTTAT	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	18/20			chr3	TogoVar
CIP2A_chr3_108544864_108594438	108575273	CACACACA others(9): Show CACACACACGTGTACGT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp1 HG01071.hp1 others(37): Show HG00735.hp1 HG01069.hp1 HG01071.hp1 HG01243.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02818.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp2 NA19240.hp2	a0001 a0003 a0006 others(2): Show a0001 a0003 a0006 a0009 a0016	a0001c0003 a0003c0005 a0003c0008 others(3): Show a0001c0003 a0003c0005 a0003c0008 a0006c0007 a0009c0014 a0016c0016	a0001c0003t0003 a0003c0005t0002 a0003c0008t0002 others(3): Show a0001c0003t0003 a0003c0005t0002 a0003c0008t0002 a0006c0007t0003 a0009c0014t0003 a0016c0016t0003	a0001c0003t0003g0001 a0001c0003t0003g0009 a0001c0003t0003g0294 others(34): Show a0001c0003t0003g0001 a0001c0003t0003g0009 a0001c0003t0003g0294 a0001c0003t0003g0295 a0001c0003t0003g0296 a0001c0003t0003g0297 a0001c0003t0003g0298 a0001c0003t0003g0299 a0001c0003t0003g0300 a0001c0003t0003g0302 a0001c0003t0003g0303 a0001c0003t0003g0304 a0001c0003t0003g0305 a0001c0003t0003g0306 a0001c0003t0003g0307 a0001c0003t0003g0308 a0001c0003t0003g0309 a0001c0003t0003g0310 a0001c0003t0003g0311 a0001c0003t0003g0312 a0001c0003t0003g0313 a0003c0005t0002g0142 a0003c0005t0002g0155 a0003c0005t0002g0156 a0003c0005t0002g0157 a0003c0005t0002g0158 a0003c0005t0002g0352 a0003c0008t0002g0159 a0003c0008t0002g0160 a0003c0008t0002g0161 a0003c0008t0002g0162 a0006c0007t0003g0354 a0006c0007t0003g0357 a0006c0007t0003g0360 a0009c0014t0003g0358 a0009c0014t0003g0359 a0016c0016t0003g0301	40	372	0.1075	-16	c.894 others(31): Show c.894+982_894+997delACGTACACGTGTGTGT	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	8/20			chr3	TogoVar
CIP2A_chr3_108544864_108594438	108575303	CGTACACA others(9): Show CGTACACACACGTGCAT	C C	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG02257.hp2 HG02818.hp2 others(7): Show HG01975.hp1 HG02257.hp2 HG02818.hp2 HG02886.hp1 HG02965.hp2 HG03041.hp1 HG03491.hp1 HG03492.hp2 HG06807.hp1 NA18522.hp1	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0001 a0004c0004t0005 a0002c0002t0001 a0004c0004t0005	a0002c0002t0001g0003 a0004c0004t0005g0012 a0004c0004t0005g0013 others(6): Show a0002c0002t0001g0003 a0004c0004t0005g0012 a0004c0004t0005g0013 a0004c0004t0005g0014 a0004c0004t0005g0149 a0004c0004t0005g0150 a0004c0004t0005g0151 a0004c0004t0005g0152 a0004c0004t0005g0153	10	372	0.0269	-16	c.894 others(31): Show c.894+952_894+967delATGCACGTGTGTGTAC	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	8/20			chr3	TogoVar
CISD1_chr10_58264162_58294586	58278472	AGCTGTGA others(9): Show AGCTGTGATTGCATCAC	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01358.hp1 HG03516.hp2 others(2): Show HG01106.hp1 HG01358.hp1 HG03516.hp2 NA19043.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0110 a0001c0001t0002g0114 a0001c0001t0002g0028 a0001c0001t0002g0110 a0001c0001t0002g0114	5	386	0.0130	-16	c.237 others(33): Show c.237+1167_237+1182delGCTGTGATTGCATCAC	CISD1	ENSG00000122873.12	transcript	ENST00000333926.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
CISD3_chr17_38725341_38740605	38738272	TCTGACCA others(9): Show TCTGACCAATGGCTGGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18943.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	411	0.0024	-16	c.48 others(27): Show c.4818_*4833delCTGACCAATGGCTGGG	CISD3	ENSG00000277972.2	transcript	ENST00000613478.2	protein_coding		2668		chr17	TogoVar
CISH_chr3_50601489_50616774	50602054	GCACACAC others(9): Show GCACACACACACACACA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00733.hp2 HG02040.hp2 others(20): Show HG00609.hp2 HG00733.hp2 HG02040.hp2 HG02071.hp1 HG02486.hp2 HG02738.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03453.hp2 HG03516.hp2 HG04228.hp1 HG06807.hp2 NA18906.hp1 NA18946.hp1 NA18957.hp1 NA18959.hp2 NA18964.hp2 NA18979.hp2 NA19004.hp1 NA19087.hp1 NA21309.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0008 a0004c0012 a0001c0001 a0003c0008 a0004c0012	a0001c0001t0001 a0001c0001t0004 a0003c0008t0001 others(1): Show a0001c0001t0001 a0001c0001t0004 a0003c0008t0001 a0004c0012t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0008 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0004g0007 a0003c0008t0001g0019 a0004c0012t0001g0037	23	360	0.0639	-16	c.55 others(27): Show c.5537_*5552delTGTGTGTGTGTGTGTG	CISH	ENSG00000114737.16	transcript	ENST00000348721.4	protein_coding		4434		chr3	TogoVar
CIT_chr12_119680791_119882320	119737306	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0001 a0001c0014t0001	a0001c0014t0001g0154 a0001c0014t0001g0154	1	236	0.0042	-16	c.295 others(35): Show c.2959-1965_2959-1950delTTTTTTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	24/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119750748	TATAGATA others(9): Show TATAGATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01109.hp2 HG01168.hp1 others(29): Show HG00735.hp2 HG01109.hp2 HG01168.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp2 HG02109.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02630.hp2 HG02809.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG03041.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03471.hp2 HG03516.hp1 HG03540.hp1 HG03834.hp1 HG03942.hp1 NA18906.hp1 NA18955.hp1 NA20752.hp2 NA21309.hp1	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0011	a0001c0003 a0001c0013 a0001c0015 others(7): Show a0001c0003 a0001c0013 a0001c0015 a0001c0025 a0001c0029 a0001c0030 a0001c0035 a0002c0004 a0006c0021 a0011c0036	a0001c0003t0003 a0001c0003t0005 a0001c0003t0017 others(9): Show a0001c0003t0003 a0001c0003t0005 a0001c0003t0017 a0001c0013t0003 a0001c0015t0006 a0001c0025t0003 a0001c0029t0003 a0001c0030t0005 a0001c0035t0003 a0002c0004t0011 a0006c0021t0003 a0011c0036t0003	a0001c0003t0003g0024 a0001c0003t0003g0026 a0001c0003t0003g0037 others(29): Show a0001c0003t0003g0024 a0001c0003t0003g0026 a0001c0003t0003g0037 a0001c0003t0003g0040 a0001c0003t0003g0080 a0001c0003t0003g0086 a0001c0003t0003g0128 a0001c0003t0003g0150 a0001c0003t0003g0178 a0001c0003t0003g0183 a0001c0003t0003g0184 a0001c0003t0003g0193 a0001c0003t0003g0197 a0001c0003t0003g0198 a0001c0003t0003g0205 a0001c0003t0003g0208 a0001c0003t0003g0213 a0001c0003t0005g0189 a0001c0003t0005g0190 a0001c0003t0017g0060 a0001c0013t0003g0025 a0001c0015t0006g0004 a0001c0015t0006g0023 a0001c0025t0003g0064 a0001c0029t0003g0187 a0001c0030t0005g0032 a0001c0035t0003g0007 a0002c0004t0011g0035 a0002c0004t0011g0038 a0002c0004t0011g0056 a0006c0021t0003g0003 a0011c0036t0003g0207	32	236	0.1356	-16	c.290 others(35): Show c.2904+1286_2904+1301delCTATCTATCTATCTAT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	23/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119785623	GTGCAACC others(9): Show GTGCAACCTCGGCTCAC	G G	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03492.hp2 HG03490.hp2 HG03492.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0045 a0001c0002t0002g0046 a0001c0002t0002g0045 a0001c0002t0002g0046	2	236	0.0085	-16	c.129 others(33): Show c.1296-574_1296-559delGTGAGCCGAGGTTGCA	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	10/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119824108	GTATATAT others(9): Show GTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG02258.hp1 HG02280.hp2 others(15): Show HG00733.hp1 HG02258.hp1 HG02280.hp2 HG02622.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02818.hp2 HG02922.hp1 HG02965.hp2 HG02976.hp1 HG03041.hp1 HG03098.hp1 HG03195.hp2 HG03453.hp2 HG03540.hp2 HG03579.hp2 NA20300.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0005 a0001c0013 others(3): Show a0001c0001 a0001c0005 a0001c0013 a0001c0015 a0002c0004 a0008c0033	a0001c0001t0005 a0001c0005t0008 a0001c0013t0005 others(6): Show a0001c0001t0005 a0001c0005t0008 a0001c0013t0005 a0001c0015t0006 a0002c0004t0003 a0002c0004t0007 a0002c0004t0011 a0002c0004t0019 a0008c0033t0006	a0001c0001t0005g0020 a0001c0005t0008g0021 a0001c0005t0008g0022 others(15): Show a0001c0001t0005g0020 a0001c0005t0008g0021 a0001c0005t0008g0022 a0001c0005t0008g0182 a0001c0005t0008g0215 a0001c0013t0005g0029 a0001c0015t0006g0004 a0002c0004t0003g0044 a0002c0004t0007g0050 a0002c0004t0007g0052 a0002c0004t0007g0053 a0002c0004t0007g0054 a0002c0004t0007g0055 a0002c0004t0007g0057 a0002c0004t0011g0056 a0002c0004t0011g0162 a0002c0004t0019g0051 a0008c0033t0006g0176	18	236	0.0763	-16	c.957 others(33): Show c.957+1041_957+1056delTATATATATATATATA	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	8/47			chr12	TogoVar
CIZ1_chr9_128161065_128196572	128190617	GGGATCGG others(9): Show GGGATCGGGAGCTCCGA	G G	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	380	0.0026	-16	c.170 others(29): Show c.170+55_170+70delTCGGAGCTCCCGATCC	CIZ1	ENSG00000148337.22	transcript	ENST00000372938.10	protein_coding	2/16			chr9	TogoVar
CKAP5_chr11_46738048_46851280	46829838	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0166	1	294	0.0034	-16	c.-37 others(33): Show c.-37-8586_-37-8571delCACACACACACACACA	CKAP5	ENSG00000175216.15	transcript	ENST00000529230.6	protein_coding	1/43			chr11	TogoVar
CKLF_chr16_66547576_66571068	66560798	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02738.hp2 HG02572.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0091 a0001c0001t0001g0084 a0001c0001t0001g0091	2	392	0.0051	-16	c.238 others(33): Show c.238-2299_238-2284delACACACACACACACAC	CKLF	ENSG00000217555.13	transcript	ENST00000264001.9	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr16	TogoVar
CKMT2_chr5_81228322_81271398	81257141	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG04184.hp1 HG02135.hp2 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0113 a0001c0001t0001g0092 a0001c0001t0001g0113	2	356	0.0056	-16	c.755 others(31): Show c.755+168_755+183delGTGTGTGTGTGTGTGT	CKMT2	ENSG00000131730.16	transcript	ENST00000254035.9	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr5	TogoVar
CKS2_chr9_89306195_89321703	89316736	TAATTTGT others(9): Show TAATTTGTGACTATTGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02056.hp1 HG03041.hp1 HG02056.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0052 a0001c0001t0002g0004 a0001c0001t0001g0052 a0001c0001t0002g0004	2	440	0.0046	-16	c.31 others(25): Show c.312_*327delAATTTGTGACTATTGA	CKS2	ENSG00000123975.5	transcript	ENST00000314355.7	protein_coding		34		chr9	TogoVar
CLASP1_chr2_121332776_121654462	121470293	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	214	0.0047	-16	c.713 others(31): Show c.713-349_713-334delAAAAAAAAAAAAAAAA	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121478617	CCACACAC others(9): Show CCACACACACACATACA	C C	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0092 a0001c0001t0023g0092	1	214	0.0047	-16	c.713 others(33): Show c.713-8673_713-8658delTGTATGTGTGTGTGTG	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121500344	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02258.hp1 HG02559.hp1 others(8): Show HG01433.hp1 HG02258.hp1 HG02559.hp1 HG02572.hp2 HG02622.hp2 HG03453.hp2 HG03516.hp2 NA18522.hp1 NA18975.hp1 NA18999.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0007 a0001c0001t0075 others(2): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0075 a0001c0002t0006 a0001c0002t0052	a0001c0001t0002g0106 a0001c0001t0007g0123 a0001c0001t0075g0017 others(8): Show a0001c0001t0002g0106 a0001c0001t0007g0123 a0001c0001t0075g0017 a0001c0002t0006g0162 a0001c0002t0006g0163 a0001c0002t0006g0164 a0001c0002t0006g0165 a0001c0002t0006g0166 a0001c0002t0006g0168 a0001c0002t0006g0169 a0001c0002t0052g0167	11	214	0.0514	-16	c.712 others(33): Show c.712+2807_712+2822delCTTTCTTTCTTTCTTT	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121582307	GAGAGAGA others(9): Show GAGAGAGAGAAAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0065 a0001c0002t0065	a0001c0002t0065g0150 a0001c0002t0065g0150	1	214	0.0047	-16	c.195 others(35): Show c.195+23378_195+23393delTTCTCTTTCTCTCTCT	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	2/40			chr2	TogoVar
CLASP2_chr3_33491245_33723254	33620997	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp1 others(73): Show HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00597.hp1 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01123.hp1 HG01167.hp1 HG01169.hp1 HG01175.hp2 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01361.hp1 HG01433.hp1 HG01496.hp2 HG01884.hp2 HG01952.hp1 HG01993.hp1 HG02004.hp2 HG02056.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02165.hp2 HG02257.hp2 HG02273.hp2 HG02300.hp2 HG02486.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp1 HG02895.hp1 HG03471.hp2 HG03486.hp1 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03831.hp2 HG03834.hp1 HG04228.hp2 NA18522.hp1 NA18612.hp1 NA18947.hp1 NA18950.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18957.hp2 NA18965.hp2 NA18968.hp2 NA18972.hp1 NA18979.hp1 NA18980.hp1 NA18981.hp1 NA18987.hp2 NA18990.hp1 NA18993.hp2 NA19000.hp2 NA19001.hp1 NA19005.hp2 NA19009.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19091.hp2 NA19240.hp2 NA20752.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0004 a0001c0012 others(3): Show a0001c0001 a0001c0004 a0001c0012 a0001c0017 a0003c0009 a0005c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0004t0002 a0001c0012t0003 a0001c0017t0003 a0003c0009t0003 a0005c0013t0003	a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0002g0008 others(73): Show a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0002g0008 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0134 a0001c0001t0002g0137 a0001c0001t0002g0152 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0003g0007 a0001c0001t0003g0017 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0042 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0067 a0001c0001t0003g0069 a0001c0001t0003g0138 a0001c0001t0003g0139 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0144 a0001c0001t0003g0145 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0150 a0001c0001t0003g0163 a0001c0001t0003g0211 a0001c0001t0003g0214 a0001c0001t0003g0215 a0001c0001t0010g0001 a0001c0001t0011g0061 a0001c0001t0013g0055 a0001c0001t0015g0031 a0001c0004t0002g0265 a0001c0004t0002g0266 a0001c0004t0002g0267 a0001c0012t0003g0006 a0001c0017t0003g0034 a0003c0009t0003g0047 a0003c0009t0003g0146 a0005c0013t0003g0038	76	278	0.2734	-16	c.118 others(35): Show c.1181+1122_1181+1137delCACACACACACACACA	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	11/38			chr3	TogoVar
CLCA1_chr1_86463927_86505259	86498173	AGGAAGGA others(9): Show AGGAAGGAAGGAAGGAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0139 a0001c0002t0001g0139	1	440	0.0023	-16	c.211 others(33): Show c.2114-383_2114-368delTGGAAGGAAGGAAGGA	CLCA1	ENSG00000016490.16	transcript	ENST00000394711.2	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLCC1_chr1_108924505_108968484	108966767	AACACACA others(9): Show AACACACACACACACAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG02717.hp1 HG03195.hp1 others(1): Show HG01109.hp1 HG02717.hp1 HG03195.hp1 HG03540.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0022 a0002c0004t0023 a0002c0004t0042 a0002c0004t0022 a0002c0004t0023 a0002c0004t0042	a0002c0004t0022g0125 a0002c0004t0022g0128 a0002c0004t0023g0127 others(1): Show a0002c0004t0022g0125 a0002c0004t0022g0128 a0002c0004t0023g0127 a0002c0004t0042g0183	4	394	0.0102	-16	c.-35 others(27): Show c.-3595_-3580delGTGTGTGTGTGTGTGT	CLCC1	ENSG00000121940.17	transcript	ENST00000369969.7	protein_coding		3284		chr1	TogoVar
CLCF1_chr11_67359168_67378598	67373009	GCCGCCCG others(9): Show GCCGCCCGCCCTTCCTC	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 NA18975.hp1 NA18993.hp2 HG02976.hp1 NA18975.hp1 NA18993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0032 a0001c0001t0001g0016 a0001c0001t0001g0032	3	308	0.0097	-16	c.16+ others(29): Show c.16+499_16+514delGAGGAAGGGCGGGCGG	CLCF1	ENSG00000175505.11	transcript	ENST00000312438.8	protein_coding	1/2			chr11	TogoVar
CLCN3_chr4_169615578_169728673	169720526	TTCTCTCT others(9): Show TTCTCTCTCTCTCTCTC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0029 a0001c0003t0029	a0001c0003t0029g0047 a0001c0003t0029g0047	1	288	0.0035	-16	c.54 others(25): Show c.547_*562delCTCTCTCTCTCTCTCT	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	13/13	547	INFO_REALIGN_3_PRIME	chr4	TogoVar
CLCN4_chrX_10151975_10242660	10204613	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG02273.hp1 NA18942.hp1 others(2): Show HG01123.hp2 HG02273.hp1 NA18942.hp1 NA18961.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0014 a0001c0001t0001 a0001c0001t0014	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0014 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0014g0003 a0001c0001t0014g0005	5	264	0.0189	-16	c.556 others(33): Show c.556-1724_556-1709delTTTTTTTTTTTTTTTT	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	6/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN5_chrX_49917596_50104230	49972112	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01515.hp1 HG02300.hp1 HG00140.hp1 HG01515.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0105 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0105	3	175	0.0171	-16	c.16+ others(33): Show c.16+46831_16+46846delGTGTGTGTGTGTGTGT	CLCN5	ENSG00000171365.17	transcript	ENST00000376091.8	protein_coding	3/14		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN6_chr1_11801191_11848130	11808227	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00597.hp1 HG00642.hp1 others(38): Show HG00099.hp1 HG00597.hp1 HG00642.hp1 HG01106.hp2 HG01255.hp1 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02080.hp1 HG02109.hp1 HG02132.hp2 HG02165.hp1 HG02559.hp2 HG02602.hp2 HG02723.hp2 HG03453.hp2 HG03471.hp1 HG03491.hp2 HG03669.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG06807.hp1 NA18944.hp1 NA18946.hp2 NA18959.hp1 NA18961.hp1 NA18967.hp1 NA18981.hp1 NA18984.hp1 NA18991.hp1 NA19000.hp1 NA19001.hp2 NA19030.hp2 NA19056.hp2 NA19060.hp2 NA19067.hp1 NA19079.hp1 NA19084.hp2 NA19085.hp2 NA19088.hp2	a0001 a0005 a0009 a0001 a0005 a0009	a0001c0001 a0001c0002 a0001c0016 others(2): Show a0001c0001 a0001c0002 a0001c0016 a0005c0017 a0009c0015	a0001c0001t0001 a0001c0001t0005 a0001c0001t0018 others(6): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0018 a0001c0001t0020 a0001c0001t0021 a0001c0002t0001 a0001c0016t0001 a0005c0017t0001 a0009c0015t0001	a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0191 others(33): Show a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0191 a0001c0001t0005g0183 a0001c0001t0005g0185 a0001c0001t0005g0186 a0001c0001t0005g0187 a0001c0001t0005g0188 a0001c0001t0005g0189 a0001c0001t0005g0192 a0001c0001t0018g0190 a0001c0001t0020g0181 a0001c0001t0021g0193 a0001c0002t0001g0004 a0001c0002t0001g0009 a0001c0002t0001g0010 a0001c0002t0001g0011 a0001c0002t0001g0012 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0054 a0001c0002t0001g0055 a0001c0016t0001g0004 a0005c0017t0001g0180 a0009c0015t0001g0053	41	290	0.1414	-16	c.147 others(33): Show c.147+1065_147+1080delGTGTGTGTGTGTGTGT	CLCN6	ENSG00000011021.23	transcript	ENST00000346436.11	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLCN7_chr16_1439935_1480028	1466923	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 NA19240.hp2 NA21309.hp1 HG02258.hp1 NA19240.hp2 NA21309.hp1	a0002 a0002	a0002c0009 a0002c0009	a0002c0009t0016 a0002c0009t0016	a0002c0009t0016g0079 a0002c0009t0016g0080 a0002c0009t0016g0081 a0002c0009t0016g0079 a0002c0009t0016g0080 a0002c0009t0016g0081	3	404	0.0074	-16	c.142 others(33): Show c.142-1601_142-1586delTTTTTTTTTTTTTTTT	CLCN7	ENSG00000103249.19	transcript	ENST00000382745.9	protein_coding	1/24			chr16	TogoVar
CLCNKA_chr1_16017036_16039050	16026476	GCTGCCTC others(9): Show GCTGCCTCGGGGTGAGA	G G	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG02486.hp1 HG02572.hp1 others(18): Show HG01071.hp1 HG02486.hp1 HG02572.hp1 HG02647.hp1 HG02717.hp2 HG02895.hp2 HG02896.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03195.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG06807.hp1 NA18906.hp2 NA19043.hp2 NA20129.hp2	a0001 a0017 a0001 a0017	a0001c0001 a0017c0025 a0001c0001 a0017c0025	a0001c0001t0001 a0001c0001t0002 a0017c0025t0001 a0001c0001t0001 a0001c0001t0002 a0017c0025t0001	a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0021 others(5): Show a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0021 a0001c0001t0001g0030 a0001c0001t0001g0061 a0001c0001t0001g0065 a0001c0001t0002g0060 a0017c0025t0001g0006	21	392	0.0536	-16	c.499 others(29): Show c.499-56_499-41delCCTCGGGGTGAGACTG	CLCNKA	ENSG00000186510.12	transcript	ENST00000331433.5	protein_coding	5/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLCNKA_chr1_16017036_16039050	16037991	AACACACA others(9): Show AACACACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG01975.hp1 HG02004.hp1 others(14): Show HG01884.hp2 HG01975.hp1 HG02004.hp1 HG02109.hp2 HG02145.hp2 HG02258.hp2 HG02451.hp1 HG02735.hp1 HG03041.hp2 HG03453.hp2 HG03471.hp1 HG03540.hp1 HG04228.hp2 NA18522.hp2 NA18941.hp1 NA18968.hp1 NA18987.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0013	a0001c0001 a0001c0005 a0002c0002 others(2): Show a0001c0001 a0001c0005 a0002c0002 a0005c0006 a0013c0015	a0001c0001t0001 a0001c0005t0001 a0002c0002t0002 others(2): Show a0001c0001t0001 a0001c0005t0001 a0002c0002t0002 a0005c0006t0004 a0013c0015t0005	a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0005t0001g0020 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0005t0001g0020 a0002c0002t0002g0003 a0002c0002t0002g0034 a0002c0002t0002g0073 a0002c0002t0002g0074 a0005c0006t0004g0070 a0013c0015t0005g0033	17	392	0.0434	-16	c.43 others(27): Show c.4334_*4349delACACACACACACACAC	CLCNKA	ENSG00000186510.12	transcript	ENST00000331433.5	protein_coding		3942		chr1	TogoVar
CLCNKB_chr1_16038782_16062308	16040147	GGGGTCTG others(9): Show GGGGTCTGCCCTCTCAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18970.hp2 NA18989.hp1 others(1): Show NA18940.hp1 NA18970.hp2 NA18989.hp1 NA19074.hp1	a0002 a0003 a0002 a0003	a0002c0003 a0003c0002 a0002c0003 a0003c0002	a0002c0003t0004 a0003c0002t0005 a0002c0003t0004 a0003c0002t0005	a0002c0003t0004g0094 a0003c0002t0005g0095 a0003c0002t0005g0096 others(1): Show a0002c0003t0004g0094 a0003c0002t0005g0095 a0003c0002t0005g0096 a0003c0002t0005g0139	4	428	0.0094	-16	c.-37 others(27): Show c.-3740_-3725delGGGTCTGCCCTCTCAT	CLCNKB	ENSG00000184908.20	transcript	ENST00000375679.9	protein_coding		3634		chr1	TogoVar
CLCNKB_chr1_16038782_16062308	16045018	GCAGAGCA others(9): Show GCAGAGCAAGTAGGGAC	G G	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0190	1	428	0.0023	-16	c.100 others(31): Show c.100+429_100+444delGAGCAAGTAGGGACCA	CLCNKB	ENSG00000184908.20	transcript	ENST00000375679.9	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLDN11_chr3_170413868_170439691	170418743	CCCCTTCA others(9): Show CCCCTTCACGCTTCCCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0090 a0001c0001t0012g0090	1	408	0.0025	-16	c.-32 others(25): Show c.-323_-308delCCCTTCACGCTTCCCT	CLDN11	ENSG00000013297.12	transcript	ENST00000064724.8	protein_coding		124		chr3	TogoVar
CLDN14_chr21_36455621_36485122	36482371	CGGATGGA others(9): Show CGGATGGATGGATGGAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02148.hp2 NA20752.hp1 HG02148.hp2 NA20752.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0038 a0002c0003t0001g0038	2	424	0.0047	-16	c.-29 others(27): Show c.-2974_-2959delATCCATCCATCCATCC	CLDN14	ENSG00000159261.12	transcript	ENST00000399135.6	protein_coding		2250		chr21	TogoVar
CLDN23_chr8_8696937_8709096	8701083	AAAATAAA others(9): Show AAAATAAATAAATAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00733.hp1 HG00738.hp1 others(24): Show HG00099.hp1 HG00733.hp1 HG00738.hp1 HG00741.hp2 HG01106.hp1 HG01106.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01361.hp1 HG01516.hp2 HG02056.hp2 HG02647.hp2 HG02922.hp2 HG03139.hp2 HG03195.hp2 HG03239.hp2 HG03516.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0000 a0001c0001t0003g0000	27	438	0.0616	-16	c.-13 others(27): Show c.-1315_-1300delAAATAAATAAATAAAT	CLDN23	ENSG00000253958.2	transcript	ENST00000519106.2	protein_coding		853		chr8	TogoVar
CLDN34_chrX_9962358_9973352	9964279	CCCTTCCT others(9): Show CCCTTCCTTCCTTCCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00544.hp2 HG00597.hp1 others(38): Show HG00099.hp2 HG00544.hp2 HG00597.hp1 HG00673.hp1 HG00733.hp2 HG01175.hp2 HG01256.hp1 HG01346.hp2 HG01358.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01981.hp1 HG02004.hp2 HG02083.hp1 HG02109.hp1 HG02155.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03098.hp1 HG03239.hp1 HG03516.hp1 NA18522.hp1 NA18950.hp1 NA18998.hp1 NA19004.hp1 NA19070.hp1 NA20129.hp1 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0003c0005	a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 a0001c0003t0001 a0003c0005t0002	a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0002t0005g0000 others(2): Show a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0002t0005g0000 a0001c0003t0001g0000 a0003c0005t0002g0000	41	330	0.1242	-16	c.-30 others(27): Show c.-3078_-3063delCCTTCCTTCCTTCCTT	CLDN34	ENSG00000234469.4	transcript	ENST00000445307.4	protein_coding		3078		chrX	TogoVar
CLDN34_chrX_9962358_9973352	9970346	CTCTTTCT others(9): Show CTCTTTCTCTTCTTCCA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00408.hp2 others(160): Show HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01123.hp1 HG01167.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01346.hp2 HG01358.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01981.hp1 HG02004.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02523.hp2 HG02572.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04228.hp1 HG06807.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18941.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18959.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18972.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18981.hp1 NA18983.hp1 NA18984.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19011.hp2 NA19030.hp1 NA19060.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19074.hp1 NA19075.hp1 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19090.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0005c0009	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 a0001c0003t0001 a0001c0003t0004 a0005c0009t0001	a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0002t0003g0000 others(4): Show a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0002t0003g0000 a0001c0002t0005g0000 a0001c0003t0001g0000 a0001c0003t0004g0000 a0005c0009t0001g0000	163	330	0.4939	-16	c.23 others(27): Show c.2345_*2360delTCTTTCTCTTCTTCCA	CLDN34	ENSG00000234469.4	transcript	ENST00000445307.4	protein_coding		1995		chrX	TogoVar
CLDN34_chrX_9962358_9973352	9970434	CTCCCTCC others(9): Show CTCCCTCCTTCCCTCCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00408.hp2 others(160): Show HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01123.hp1 HG01167.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01346.hp2 HG01358.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01981.hp1 HG02004.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02523.hp2 HG02572.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04228.hp1 HG06807.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18941.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18959.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18972.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18981.hp1 NA18983.hp1 NA18984.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19011.hp2 NA19030.hp1 NA19060.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19074.hp1 NA19075.hp1 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19090.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0005c0009	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 a0001c0003t0001 a0001c0003t0004 a0005c0009t0001	a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0002t0003g0000 others(4): Show a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0002t0003g0000 a0001c0002t0005g0000 a0001c0003t0001g0000 a0001c0003t0004g0000 a0005c0009t0001g0000	163	330	0.4939	-16	c.24 others(27): Show c.2433_*2448delTCCCTCCTTCCCTCCT	CLDN34	ENSG00000234469.4	transcript	ENST00000445307.4	protein_coding		2083		chrX	TogoVar
CLDN4_chr7_73825996_73837690	73835142	TCCCTCTC others(9): Show TCCCTCTCCCTCCTCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18954.hp2 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	1	372	0.0027	-16	c.33 others(27): Show c.3312_*3327delCCCTCTCCCTCCTCTC	CLDN4	ENSG00000189143.10	transcript	ENST00000340958.4	protein_coding		2453		chr7	TogoVar
CLDN7_chr17_7254903_7267478	7265112	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	418	0.0024	-16	c.-30 others(27): Show c.-3085_-3070delAAAAAAAAAAAAAAAA	CLDN7	ENSG00000181885.18	transcript	ENST00000360325.11	protein_coding		2635		chr17	TogoVar
CLDN8_chr21_30209006_30221097	30210277	GTGTATAT others(9): Show GTGTATATATATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	1	466	0.0022	-16	c.49 others(27): Show c.4955_*4970delTATATATATATATACA	CLDN8	ENSG00000156284.6	transcript	ENST00000399899.2	protein_coding		3728		chr21	TogoVar
CLDN8_chr21_30209006_30221097	30210279	GTATATAT others(9): Show GTATATATATATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02056.hp2 HG02071.hp2 HG02129.hp2 others(2): Show HG02056.hp2 HG02071.hp2 HG02129.hp2 HG03688.hp2 NA19063.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0002c0002t0007 a0001c0001t0001 a0002c0002t0002 a0002c0002t0007	a0001c0001t0001g0000 a0002c0002t0002g0000 a0002c0002t0007g0000 a0001c0001t0001g0000 a0002c0002t0002g0000 a0002c0002t0007g0000	5	466	0.0107	-16	c.49 others(27): Show c.4953_*4968delTATATATATATATATA	CLDN8	ENSG00000156284.6	transcript	ENST00000399899.2	protein_coding		3726		chr21	TogoVar
CLDND2_chr19_51362098_51374003	51362162	TACACACA others(9): Show TACACACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0008 a0001c0001t0005g0008	1	440	0.0023	-16	c.49 others(27): Show c.4964_*4979delGTGTGTGTGTGTGTGT	CLDND2	ENSG00000160318.6	transcript	ENST00000291715.5	protein_coding		4935		chr19	TogoVar
CLEC10A_chr17_7069537_7085251	7070600	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 HG01192.hp1 HG02132.hp2 others(2): Show HG01074.hp1 HG01192.hp1 HG02132.hp2 HG02896.hp1 HG02897.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0005 a0002c0001t0001 a0002c0001t0003 a0001c0003t0005 a0002c0001t0001 a0002c0001t0003	a0001c0003t0005g0010 a0002c0001t0001g0001 a0002c0001t0001g0100 others(1): Show a0001c0003t0005g0010 a0002c0001t0001g0001 a0002c0001t0001g0100 a0002c0001t0003g0005	5	458	0.0109	-16	c.44 others(27): Show c.4438_*4453delCTTTCTTTCTTTCTTT	CLEC10A	ENSG00000132514.14	transcript	ENST00000416562.7	protein_coding		3936		chr17	TogoVar

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