Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CLMP_chr11_123064872_123200248	123118987	TTCTTTCT others(9): Show TTCTTTCTTTCTTTCTC	T T	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG01517.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0016 a0001c0007t0001g0016	1	254	0.0039	-16	c.29- others(33): Show c.29-21051_29-21036delGAGAAAGAAAGAAAGA	CLMP	ENSG00000166250.12	transcript	ENST00000448775.4	protein_coding	1/6			chr11	TogoVar
CLMP_chr11_123064872_123200248	123118991	TTCTTTCT others(9): Show TTCTTTCTTTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0184 a0001c0001t0012g0184	1	254	0.0039	-16	c.29- others(33): Show c.29-21055_29-21040delGAGAGAGAAAGAAAGA	CLMP	ENSG00000166250.12	transcript	ENST00000448775.4	protein_coding	1/6			chr11	TogoVar
CLMP_chr11_123064872_123200248	123119052	CCTCTCTC others(9): Show CCTCTCTCTCTCTCTCT	C C	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG01952.hp2 HG02273.hp1 others(4): Show HG01943.hp2 HG01952.hp2 HG02273.hp1 HG03704.hp2 NA18945.hp1 NA19002.hp2 NA19077.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0001c0001t0012 a0002c0002t0025 a0001c0001t0005 a0001c0001t0012 a0002c0002t0025	a0001c0001t0005g0038 a0001c0001t0005g0069 a0001c0001t0005g0087 others(4): Show a0001c0001t0005g0038 a0001c0001t0005g0069 a0001c0001t0005g0087 a0001c0001t0005g0105 a0001c0001t0012g0140 a0001c0001t0012g0142 a0002c0002t0025g0106	7	254	0.0276	-16	c.29- others(33): Show c.29-21116_29-21101delAGAGAGAGAGAGAGAG	CLMP	ENSG00000166250.12	transcript	ENST00000448775.4	protein_coding	1/6			chr11	TogoVar
CLMP_chr11_123064872_123200248	123150416	TAAGAAAG others(9): Show TAAGAAAGAAAGAAAGA	T T	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	254	0.0039	-16	c.28+ others(33): Show c.28+44481_28+44496delTCTTTCTTTCTTTCTT	CLMP	ENSG00000166250.12	transcript	ENST00000448775.4	protein_coding	1/6			chr11	TogoVar
CLN8_chr8_1758789_1791570	1763628	CCCCCCGC others(9): Show CCCCCCGCCGCGCCCCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp1 HG03486.hp2 HG02622.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0011 a0001c0001t0003 a0001c0001t0011	a0001c0001t0003g0007 a0001c0001t0011g0009 a0001c0001t0003g0007 a0001c0001t0011g0009	2	413	0.0048	-16	c.-38 others(25): Show c.-380_-365delCCCCCGCCGCGCCCCT	CLN8	ENSG00000182372.10	transcript	ENST00000331222.6	protein_coding		160		chr8	TogoVar
CLNK_chr4_10481395_10689768	10507436	TTTTATTT others(9): Show TTTTATTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00423.hp1 others(136): Show HG00140.hp1 HG00280.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp2 HG00597.hp1 HG00639.hp1 HG00642.hp2 HG00735.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01099.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01358.hp1 HG01433.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02109.hp1 HG02129.hp1 HG02135.hp1 HG02135.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02258.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02723.hp2 HG02738.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp2 HG03490.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03942.hp2 HG04115.hp2 HG04204.hp1 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18950.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp2 NA18966.hp2 NA18973.hp1 NA18973.hp2 NA18978.hp1 NA18979.hp1 NA18979.hp2 NA18982.hp2 NA18985.hp1 NA18986.hp2 NA18988.hp1 NA18989.hp1 NA18994.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19062.hp1 NA19066.hp2 NA19074.hp1 NA19074.hp2 NA19084.hp2 NA19087.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2 NA21309.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008	a0001c0001 a0001c0010 a0002c0002 others(5): Show a0001c0001 a0001c0010 a0002c0002 a0003c0003 a0004c0006 a0005c0007 a0006c0011 a0008c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(35): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0014 a0001c0001t0016 a0001c0001t0019 a0001c0001t0022 a0001c0001t0024 a0001c0001t0029 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0039 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0065 a0001c0001t0069 a0001c0001t0075 a0001c0010t0005 a0002c0002t0001 a0002c0002t0004 a0002c0002t0005 a0002c0002t0031 a0002c0002t0061 a0003c0003t0003 a0004c0006t0004 a0004c0006t0018 a0005c0007t0019 a0005c0007t0068 a0006c0011t0031 a0008c0013t0001	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0024 others(136): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0024 a0001c0001t0001g0039 a0001c0001t0001g0041 a0001c0001t0001g0052 a0001c0001t0001g0057 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0154 a0001c0001t0001g0173 a0001c0001t0001g0189 a0001c0001t0001g0196 a0001c0001t0001g0276 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0002g0017 a0001c0001t0003g0005 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0124 a0001c0001t0003g0200 a0001c0001t0003g0202 a0001c0001t0003g0203 a0001c0001t0003g0204 a0001c0001t0003g0205 a0001c0001t0003g0207 a0001c0001t0003g0208 a0001c0001t0003g0212 a0001c0001t0003g0216 a0001c0001t0003g0221 a0001c0001t0003g0225 a0001c0001t0003g0228 a0001c0001t0003g0232 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0240 a0001c0001t0003g0247 a0001c0001t0003g0250 a0001c0001t0003g0303 a0001c0001t0003g0304 a0001c0001t0003g0308 a0001c0001t0004g0007 a0001c0001t0004g0009 a0001c0001t0004g0026 a0001c0001t0004g0036 a0001c0001t0004g0042 a0001c0001t0004g0050 a0001c0001t0004g0056 a0001c0001t0004g0067 a0001c0001t0004g0068 a0001c0001t0004g0072 a0001c0001t0004g0078 a0001c0001t0004g0126 a0001c0001t0004g0129 a0001c0001t0004g0140 a0001c0001t0004g0143 a0001c0001t0004g0146 a0001c0001t0004g0161 a0001c0001t0004g0188 a0001c0001t0004g0281 a0001c0001t0004g0289 a0001c0001t0004g0290 a0001c0001t0005g0108 a0001c0001t0005g0217 a0001c0001t0005g0233 a0001c0001t0005g0241 a0001c0001t0005g0242 a0001c0001t0005g0245 a0001c0001t0005g0246 a0001c0001t0005g0249 a0001c0001t0005g0260 a0001c0001t0005g0267 a0001c0001t0005g0270 a0001c0001t0005g0296 a0001c0001t0005g0306 a0001c0001t0005g0309 a0001c0001t0014g0008 a0001c0001t0014g0023 a0001c0001t0014g0063 a0001c0001t0014g0180 a0001c0001t0016g0043 a0001c0001t0016g0103 a0001c0001t0016g0187 a0001c0001t0016g0279 a0001c0001t0019g0014 a0001c0001t0019g0151 a0001c0001t0022g0055 a0001c0001t0022g0099 a0001c0001t0022g0171 a0001c0001t0024g0227 a0001c0001t0024g0272 a0001c0001t0029g0257 a0001c0001t0029g0259 a0001c0001t0033g0038 a0001c0001t0033g0198 a0001c0001t0035g0194 a0001c0001t0036g0193 a0001c0001t0039g0262 a0001c0001t0041g0222 a0001c0001t0042g0305 a0001c0001t0044g0190 a0001c0001t0057g0021 a0001c0001t0058g0022 a0001c0001t0059g0066 a0001c0001t0060g0071 a0001c0001t0065g0019 a0001c0001t0069g0152 a0001c0001t0075g0131 a0001c0010t0005g0210 a0002c0002t0001g0002 a0002c0002t0001g0040 a0002c0002t0004g0051 a0002c0002t0004g0060 a0002c0002t0004g0061 a0002c0002t0004g0087 a0002c0002t0005g0252 a0002c0002t0031g0318 a0002c0002t0061g0044 a0003c0003t0003g0297 a0004c0006t0004g0082 a0004c0006t0018g0080 a0004c0006t0018g0081 a0004c0006t0018g0083 a0005c0007t0019g0053 a0005c0007t0068g0062 a0006c0011t0031g0199 a0008c0013t0001g0280	139	320	0.4344	-16	c.984 others(31): Show c.984+507_984+522delTAAATAAATAAATAAA	CLNK	ENSG00000109684.16	transcript	ENST00000226951.11	protein_coding	17/18			chr4	TogoVar
CLNK_chr4_10481395_10689768	10535213	GAGAAAGA others(9): Show GAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00639.hp1 HG00642.hp2 others(12): Show HG00280.hp1 HG00639.hp1 HG00642.hp2 HG01257.hp1 HG02145.hp2 HG02258.hp2 HG02615.hp1 HG02818.hp2 HG02922.hp2 HG03540.hp1 HG04204.hp1 HG06807.hp2 NA19030.hp1 NA19087.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0006c0011	a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 others(7): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0014 a0001c0001t0016 a0001c0001t0032 a0001c0001t0036 a0002c0002t0031 a0003c0003t0003 a0006c0011t0031	a0001c0001t0003g0204 a0001c0001t0003g0225 a0001c0001t0003g0236 others(12): Show a0001c0001t0003g0204 a0001c0001t0003g0225 a0001c0001t0003g0236 a0001c0001t0004g0140 a0001c0001t0004g0146 a0001c0001t0004g0281 a0001c0001t0010g0269 a0001c0001t0014g0008 a0001c0001t0016g0043 a0001c0001t0016g0103 a0001c0001t0032g0295 a0001c0001t0036g0193 a0002c0002t0031g0318 a0003c0003t0003g0297 a0006c0011t0031g0199	15	320	0.0469	-16	c.603 others(33): Show c.603-2946_603-2931delTTCTTTCTTTCTTTCT	CLNK	ENSG00000109684.16	transcript	ENST00000226951.11	protein_coding	11/18			chr4	TogoVar
CLNK_chr4_10481395_10689768	10610033	GTTTTTTT others(9): Show GTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(45): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00423.hp2 HG00438.hp1 HG00544.hp2 HG00735.hp1 HG00738.hp2 HG01081.hp1 HG01261.hp1 HG01261.hp2 HG01433.hp1 HG01993.hp2 HG02040.hp2 HG02145.hp2 HG02148.hp2 HG02165.hp1 HG02523.hp2 HG02615.hp2 HG02886.hp2 HG02965.hp1 HG03225.hp1 HG04115.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18906.hp2 NA18940.hp1 NA18943.hp2 NA18951.hp2 NA18959.hp1 NA18960.hp1 NA18964.hp2 NA18970.hp1 NA18973.hp1 NA18979.hp2 NA18986.hp2 NA18989.hp2 NA18994.hp1 NA19004.hp1 NA19004.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp2 NA19087.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0014 a0001c0001t0020 a0001c0001t0032 a0001c0001t0033 a0001c0001t0039 a0001c0001t0058 a0001c0001t0060 a0001c0001t0064 a0001c0001t0069 a0001c0001t0071 a0001c0001t0075 a0001c0001t0080	a0001c0001t0001g0041 a0001c0001t0001g0085 a0001c0001t0001g0089 others(45): Show a0001c0001t0001g0041 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0196 a0001c0001t0002g0127 a0001c0001t0002g0298 a0001c0001t0003g0091 a0001c0001t0003g0124 a0001c0001t0003g0202 a0001c0001t0003g0204 a0001c0001t0003g0216 a0001c0001t0004g0007 a0001c0001t0004g0009 a0001c0001t0004g0026 a0001c0001t0004g0036 a0001c0001t0004g0042 a0001c0001t0004g0072 a0001c0001t0004g0126 a0001c0001t0004g0129 a0001c0001t0004g0281 a0001c0001t0005g0217 a0001c0001t0005g0233 a0001c0001t0005g0263 a0001c0001t0006g0028 a0001c0001t0006g0058 a0001c0001t0006g0070 a0001c0001t0006g0073 a0001c0001t0006g0075 a0001c0001t0006g0164 a0001c0001t0008g0312 a0001c0001t0009g0183 a0001c0001t0009g0184 a0001c0001t0014g0008 a0001c0001t0014g0023 a0001c0001t0014g0063 a0001c0001t0020g0064 a0001c0001t0020g0069 a0001c0001t0020g0076 a0001c0001t0032g0295 a0001c0001t0033g0038 a0001c0001t0039g0262 a0001c0001t0058g0022 a0001c0001t0060g0071 a0001c0001t0064g0029 a0001c0001t0069g0152 a0001c0001t0071g0320 a0001c0001t0075g0131 a0001c0001t0080g0130	48	320	0.1500	-16	c.12- others(33): Show c.12-12000_12-11985delAAAAAAAAAAAAAAAA	CLNK	ENSG00000109684.16	transcript	ENST00000226951.11	protein_coding	2/18			chr4	TogoVar
CLNK_chr4_10481395_10689768	10616784	GTGTGTGT others(9): Show GTGTGTGTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02145.hp1 HG02145.hp2 others(3): Show HG01433.hp1 HG02145.hp1 HG02145.hp2 HG03453.hp1 HG03927.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0001c0001t0032 a0001c0008t0056	a0001c0001t0001g0294 a0001c0001t0003g0124 a0001c0001t0010g0125 others(3): Show a0001c0001t0001g0294 a0001c0001t0003g0124 a0001c0001t0010g0125 a0001c0001t0010g0314 a0001c0001t0032g0295 a0001c0008t0056g0317	6	320	0.0188	-16	c.12- others(33): Show c.12-18751_12-18736delTATATATATACACACA	CLNK	ENSG00000109684.16	transcript	ENST00000226951.11	protein_coding	2/18			chr4	TogoVar
CLNK_chr4_10481395_10689768	10655334	CAGAGAGA others(9): Show CAGAGAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01109.hp2 HG01515.hp1 others(6): Show HG01070.hp2 HG01109.hp2 HG01515.hp1 HG01517.hp1 HG01934.hp1 HG02257.hp2 HG02738.hp2 NA20905.hp1 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0007 a0003c0003t0008 others(2): Show a0003c0003t0003 a0003c0003t0007 a0003c0003t0008 a0003c0003t0017 a0003c0003t0048	a0003c0003t0003g0297 a0003c0003t0007g0111 a0003c0003t0007g0116 others(6): Show a0003c0003t0003g0297 a0003c0003t0007g0111 a0003c0003t0007g0116 a0003c0003t0007g0117 a0003c0003t0008g0115 a0003c0003t0017g0112 a0003c0003t0017g0113 a0003c0003t0017g0114 a0003c0003t0048g0110	9	320	0.0281	-16	c.11+ others(33): Show c.11+12509_11+12524delCTCTCTCTCTCTCTCT	CLNK	ENSG00000109684.16	transcript	ENST00000226951.11	protein_coding	2/18			chr4	TogoVar
CLNS1A_chr11_77609530_77642794	77631332	TTTTTTTT others(9): Show TTTTTTTTTAGACAGAG	T T	intron_variant intron_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0064	1	408	0.0025	-16	c.126 others(33): Show c.126-1449_126-1434delCTCTGTCTAAAAAAAA	CLNS1A	ENSG00000074201.9	transcript	ENST00000525428.6	protein_coding	1/6			chr11	TogoVar
CLOCK_chr4_55422903_55551909	55427403	CGCAATCT others(9): Show CGCAATCTCGGCTCACT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0027 a0001c0002t0027	a0001c0002t0027g0296 a0001c0002t0027g0296	1	338	0.0030	-16	c.79 others(27): Show c.7996_*8011delAGTGAGCCGAGATTGC	CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding		499		chr4	TogoVar
CLOCK_chr4_55422903_55551909	55448599	CGCGTGTG others(9): Show CGCGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02895.hp1 HG02896.hp2 others(2): Show HG02559.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG06807.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0017 a0001c0002t0058 a0001c0002t0017 a0001c0002t0058	a0001c0002t0017g0297 a0001c0002t0017g0299 a0001c0002t0017g0300 others(2): Show a0001c0002t0017g0297 a0001c0002t0017g0299 a0001c0002t0017g0300 a0001c0002t0017g0301 a0001c0002t0058g0298	5	338	0.0148	-16	c.153 others(33): Show c.1539+164_1539+179delACACACACACACACGC	CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	18/22			chr4	TogoVar
CLOCK_chr4_55422903_55551909	55448601	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02559.hp1 HG02622.hp1 others(3): Show HG01884.hp2 HG02559.hp1 HG02622.hp1 HG02630.hp1 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0018 a0002c0003t0028 a0002c0003t0029 a0001c0001t0018 a0002c0003t0028 a0002c0003t0029	a0001c0001t0018g0286 a0001c0001t0018g0287 a0002c0003t0028g0292 others(3): Show a0001c0001t0018g0286 a0001c0001t0018g0287 a0002c0003t0028g0292 a0002c0003t0028g0293 a0002c0003t0028g0294 a0002c0003t0029g0187	6	338	0.0178	-16	c.153 others(33): Show c.1539+162_1539+177delACACACACACACACAC	CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	18/22			chr4	TogoVar
CLPB_chr11_72280495_72439531	72297636	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01978.hp2 HG02148.hp1 others(3): Show HG01169.hp1 HG01978.hp2 HG02148.hp1 HG02451.hp2 NA18947.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0001 a0001c0001t0008 a0001c0001t0022 others(2): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0022 a0001c0001t0049 a0001c0010t0114	a0001c0001t0001g0064 a0001c0001t0008g0086 a0001c0001t0008g0124 others(3): Show a0001c0001t0001g0064 a0001c0001t0008g0086 a0001c0001t0008g0124 a0001c0001t0022g0087 a0001c0001t0049g0068 a0001c0010t0114g0196	6	206	0.0291	-16	c.142 others(35): Show c.1420-2004_1420-1989delACACACACACACACAC	CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	12/16			chr11	TogoVar
CLPP_chr19_6356531_6375242	6370447	AAGCGGAG others(9): Show AAGCGGAGCTTGCAGTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp1 HG03540.hp1 HG03669.hp1 others(3): Show HG02630.hp1 HG03540.hp1 HG03669.hp1 HG04199.hp1 NA18969.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0014 a0001c0001t0001 a0001c0001t0003 a0001c0001t0014	a0001c0001t0001g0001 a0001c0001t0001g0047 a0001c0001t0003g0019 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0047 a0001c0001t0003g0019 a0001c0001t0014g0001	6	380	0.0158	-16	c.17 others(27): Show c.1738_*1753delAGCGGAGCTTGCAGTG	CLPP	ENSG00000125656.11	transcript	ENST00000245816.11	protein_coding		206		chr19	TogoVar
CLPSL2_chr6_35771598_35784552	35772735	TATATATA others(9): Show TATATATATATATATGC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG02145.hp2 HG02559.hp2 others(8): Show HG00741.hp2 HG02145.hp2 HG02559.hp2 HG02647.hp1 HG02809.hp2 HG03453.hp2 HG03486.hp2 NA18906.hp1 NA19030.hp2 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0013 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0014	11	460	0.0239	-16	c.-38 others(27): Show c.-3883_-3868delATATATATATATATGC	CLPSL2	ENSG00000196748.10	transcript	ENST00000403376.4	protein_coding		3862		chr6	TogoVar
CLPSL2_chr6_35771598_35784552	35775015	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00639.hp1 others(95): Show HG00140.hp2 HG00323.hp1 HG00639.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01255.hp2 HG01258.hp1 HG01884.hp1 HG01975.hp2 HG02015.hp1 HG02040.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02615.hp2 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02895.hp1 HG02897.hp1 HG02965.hp1 HG02970.hp1 HG03130.hp1 HG03139.hp1 HG03225.hp2 HG03540.hp2 HG03688.hp2 HG03704.hp1 HG03927.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 NA18747.hp1 NA18940.hp1 NA18944.hp1 NA18945.hp2 NA18952.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18974.hp2 NA18977.hp1 NA18980.hp2 NA18984.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19003.hp2 NA19006.hp1 NA19030.hp1 NA19063.hp1 NA19064.hp1 NA19070.hp1 NA19072.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA20129.hp2 NA20805.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034	98	460	0.2130	-16	c.-16 others(27): Show c.-1603_-1588delAAAAAAAAAAAAAAAA	CLPSL2	ENSG00000196748.10	transcript	ENST00000403376.4	protein_coding		1582		chr6	TogoVar
CLPS_chr6_35789982_35802323	35797482	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	418	0.0024	-16	c.-21 others(25): Show c.-210_-195delACACACACACACACAC	CLPS	ENSG00000137392.10	transcript	ENST00000259938.7	protein_coding		160		chr6	TogoVar
CLPTM1_chr19_44950380_44998341	44954345	ATGCAGTG others(9): Show ATGCAGTGAGCCGAGGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0060 a0001c0002t0001g0060	1	374	0.0027	-16	c.-10 others(27): Show c.-1050_-1035delTGCAGTGAGCCGAGGT	CLPTM1	ENSG00000104853.16	transcript	ENST00000337392.10	protein_coding		1034		chr19	TogoVar
CLPX_chr15_65143219_65190342	65181749	AAAATAAA others(9): Show AAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp2 HG01515.hp1 HG01515.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0158 a0001c0001t0001g0131 a0001c0001t0001g0158	2	190	0.0105	-16	c.80- others(31): Show c.80-1561_80-1546delATTTATTTATTTATTT	CLPX	ENSG00000166855.9	transcript	ENST00000300107.7	protein_coding	1/13			chr15	TogoVar
CLRN1_chr3_150921567_150977727	150973814	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18983.hp1 NA18989.hp1 NA18983.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0027 a0001c0001t0001g0028	2	408	0.0049	-16	c.-11 others(27): Show c.-1122_-1107delCACACACACACACACA	CLRN1	ENSG00000163646.12	transcript	ENST00000327047.6	protein_coding		1088		chr3	TogoVar
CLSPN_chr1_35727112_35774978	35728921	AACACACA others(9): Show AACACACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00544.hp2 HG01261.hp1 others(28): Show HG00438.hp2 HG00544.hp2 HG01261.hp1 HG01884.hp1 HG01891.hp1 HG02055.hp1 HG02055.hp2 HG02257.hp2 HG02451.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02886.hp2 HG02897.hp1 HG02922.hp1 HG03195.hp2 HG03471.hp2 HG03486.hp1 HG03516.hp2 HG03834.hp2 HG03927.hp1 HG04199.hp1 HG06807.hp1 NA18969.hp1 NA18975.hp2 NA19030.hp1 NA19043.hp2 NA19056.hp2 NA19079.hp1 NA19088.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0007c0007	a0001c0001t0003 a0001c0001t0010 a0001c0001t0020 others(4): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0020 a0002c0002t0002 a0003c0003t0013 a0003c0003t0014 a0007c0007t0003	a0001c0001t0003g0011 a0001c0001t0003g0012 a0001c0001t0003g0025 others(23): Show a0001c0001t0003g0011 a0001c0001t0003g0012 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0040 a0001c0001t0003g0184 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0215 a0001c0001t0003g0217 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0003g0221 a0001c0001t0010g0027 a0001c0001t0010g0223 a0001c0001t0010g0224 a0001c0001t0010g0225 a0001c0001t0020g0222 a0002c0002t0002g0150 a0003c0003t0013g0190 a0003c0003t0014g0197 a0007c0007t0003g0013 a0007c0007t0003g0032	31	296	0.1047	-16	c.75 others(27): Show c.7559_*7574delGTGTGTGTGTGTGTGT	CLSPN	ENSG00000092853.14	transcript	ENST00000318121.8	protein_coding		3190		chr1	TogoVar
CLSTN2_chr3_139930185_140582397	140089580	TTTTATTT others(9): Show TTTTATTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG02135.hp1 others(13): Show HG01167.hp1 HG01169.hp2 HG02135.hp1 HG02280.hp1 HG02630.hp2 HG02723.hp1 HG02809.hp2 HG02922.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03516.hp2 HG03688.hp2 NA19043.hp1 NA20300.hp2 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0001c0009 others(5): Show a0001c0001 a0001c0003 a0001c0009 a0002c0002 a0002c0010 a0002c0021 a0002c0022 a0003c0012	a0001c0001t0001 a0001c0001t0006 a0001c0003t0003 others(10): Show a0001c0001t0001 a0001c0001t0006 a0001c0003t0003 a0001c0003t0012 a0001c0009t0022 a0002c0002t0002 a0002c0002t0005 a0002c0002t0028 a0002c0002t0044 a0002c0010t0023 a0002c0021t0009 a0002c0022t0010 a0003c0012t0008	a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0076 others(13): Show a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0076 a0001c0001t0006g0040 a0001c0003t0003g0071 a0001c0003t0012g0052 a0001c0003t0012g0053 a0001c0009t0022g0049 a0002c0002t0002g0086 a0002c0002t0005g0050 a0002c0002t0028g0005 a0002c0002t0044g0096 a0002c0010t0023g0081 a0002c0021t0009g0030 a0002c0022t0010g0020 a0003c0012t0008g0041	16	110	0.1455	-16	c.110 others(35): Show c.110-86339_110-86324delATTTATTTATTTATTT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140135105	CACACACA others(9): Show CACACACACACACATAT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02257.hp1 HG02809.hp2 others(1): Show HG02145.hp2 HG02257.hp1 HG02809.hp2 HG03486.hp1	a0001 a0002 a0001 a0002	a0001c0009 a0002c0002 a0002c0005 a0001c0009 a0002c0002 a0002c0005	a0001c0009t0018 a0002c0002t0011 a0002c0002t0044 others(1): Show a0001c0009t0018 a0002c0002t0011 a0002c0002t0044 a0002c0005t0004	a0001c0009t0018g0018 a0002c0002t0011g0103 a0002c0002t0044g0096 others(1): Show a0001c0009t0018g0018 a0002c0002t0011g0103 a0002c0002t0044g0096 a0002c0005t0004g0077	4	110	0.0364	-16	c.110 others(35): Show c.110-40844_110-40829delCACACACACACATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140135107	CACACACA others(9): Show CACACACACACATATAT	C C	intron_variant intron_variant	MODIFIER	HG03225.hp1 NA20300.hp1 HG03225.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0005 a0001c0009t0010 a0001c0001t0005 a0001c0009t0010	a0001c0001t0005g0035 a0001c0009t0010g0110 a0001c0001t0005g0035 a0001c0009t0010g0110	2	110	0.0182	-16	c.110 others(35): Show c.110-40842_110-40827delCACACACACATATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140135111	CACACACA others(9): Show CACACACATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0004 a0002c0005t0004	a0002c0005t0004g0092 a0002c0005t0004g0092	1	110	0.0091	-16	c.110 others(35): Show c.110-40838_110-40823delCACACATATATATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140135113	CACACATA others(9): Show CACACATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0009 a0001c0008t0009	a0001c0008t0009g0042 a0001c0008t0009g0042	1	110	0.0091	-16	c.110 others(35): Show c.110-40836_110-40821delCACATATATATATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240136	CTCTCTCT others(9): Show CTCTCTCTCTCTCTCTG	C C	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0095 a0001c0001t0006g0095	1	110	0.0091	-16	c.232 others(35): Show c.232+64079_232+64094delGTCTCTCTCTCTCTCT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240209	CACACACA others(9): Show CACACACACACACATAT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01243.hp2 HG01433.hp2 others(7): Show HG01109.hp2 HG01243.hp2 HG01433.hp2 HG02280.hp1 HG02572.hp1 HG03041.hp2 HG03516.hp1 HG03579.hp1 HG03579.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0001c0014 others(3): Show a0001c0001 a0001c0008 a0001c0014 a0002c0002 a0002c0005 a0002c0016	a0001c0001t0001 a0001c0001t0006 a0001c0001t0013 others(6): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0013 a0001c0008t0009 a0001c0014t0032 a0002c0002t0002 a0002c0002t0027 a0002c0005t0004 a0002c0016t0015	a0001c0001t0001g0056 a0001c0001t0006g0040 a0001c0001t0006g0055 others(7): Show a0001c0001t0001g0056 a0001c0001t0006g0040 a0001c0001t0006g0055 a0001c0001t0013g0017 a0001c0008t0009g0100 a0001c0014t0032g0028 a0002c0002t0002g0002 a0002c0002t0027g0058 a0002c0005t0004g0038 a0002c0016t0015g0088	10	110	0.0909	-16	c.232 others(35): Show c.232+64138_232+64153delCACACACACACATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140264375	AATATATA others(9): Show AATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0007 a0002c0002t0001g0007	1	110	0.0091	-16	c.232 others(35): Show c.232+88340_232+88355delTATATATATATATATA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140419513	ACACACAC others(9): Show ACACACACATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03486.hp2 HG02886.hp1 HG03486.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0041 a0002c0002t0026 a0001c0001t0041 a0002c0002t0026	a0001c0001t0041g0047 a0002c0002t0026g0094 a0001c0001t0041g0047 a0002c0002t0026g0094	2	110	0.0182	-16	c.638 others(33): Show c.638-1611_638-1596delCACACACATATGTGTG	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	4/16			chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140419520	CATATGTG others(9): Show CATATGTGTGTGTATAT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01167.hp1 HG01169.hp2 others(20): Show HG00738.hp2 HG01167.hp1 HG01169.hp2 HG01496.hp2 HG01884.hp2 HG02135.hp1 HG02145.hp2 HG02280.hp1 HG02615.hp1 HG02622.hp2 HG02809.hp2 HG02965.hp2 HG03041.hp2 HG03139.hp1 HG03209.hp2 HG03492.hp2 HG03516.hp1 HG03579.hp2 HG03688.hp1 NA18977.hp2 NA19043.hp1 NA19079.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 others(3): Show a0001c0001 a0001c0003 a0002c0002 a0002c0005 a0002c0016 a0002c0017	a0001c0001t0001 a0001c0001t0006 a0001c0001t0011 others(13): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0011 a0001c0001t0014 a0001c0001t0042 a0001c0001t0043 a0001c0003t0003 a0001c0003t0012 a0002c0002t0002 a0002c0002t0004 a0002c0002t0011 a0002c0002t0028 a0002c0002t0044 a0002c0005t0004 a0002c0016t0015 a0002c0017t0005	a0001c0001t0001g0048 a0001c0001t0001g0076 a0001c0001t0006g0040 others(20): Show a0001c0001t0001g0048 a0001c0001t0001g0076 a0001c0001t0006g0040 a0001c0001t0006g0055 a0001c0001t0011g0031 a0001c0001t0014g0001 a0001c0001t0014g0032 a0001c0001t0042g0011 a0001c0001t0043g0064 a0001c0003t0003g0080 a0001c0003t0012g0052 a0001c0003t0012g0053 a0002c0002t0002g0054 a0002c0002t0002g0086 a0002c0002t0004g0107 a0002c0002t0011g0039 a0002c0002t0028g0005 a0002c0002t0044g0096 a0002c0005t0004g0038 a0002c0005t0004g0046 a0002c0005t0004g0077 a0002c0016t0015g0088 a0002c0017t0005g0027	23	110	0.2091	-16	c.638 others(33): Show c.638-1600_638-1585delGTGTGTGTATATATAT	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140419634	TATACATA others(9): Show TATACATATATATGTAC	T T	intron_variant intron_variant	MODIFIER	HG03098.hp1 NA20300.hp1 HG03098.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0001 a0001c0009t0010 a0001c0001t0001 a0001c0009t0010	a0001c0001t0001g0045 a0001c0009t0010g0110 a0001c0001t0001g0045 a0001c0009t0010g0110	2	110	0.0182	-16	c.638 others(33): Show c.638-1489_638-1474delTACATATATATGTACA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140448209	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp2 HG00735.hp1 others(42): Show HG00621.hp1 HG00621.hp2 HG00735.hp1 HG00738.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01884.hp2 HG02135.hp1 HG02145.hp2 HG02257.hp2 HG02280.hp2 HG02615.hp1 HG02630.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp2 HG03516.hp1 HG03688.hp2 HG03704.hp2 HG04199.hp1 HG06807.hp2 NA19043.hp1 NA19066.hp2 NA19079.hp1 NA19087.hp2 NA20300.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0001c0006 others(8): Show a0001c0001 a0001c0003 a0001c0006 a0001c0008 a0001c0009 a0001c0014 a0002c0002 a0002c0005 a0002c0010 a0002c0023 a0005c0011	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(26): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0014 a0001c0001t0025 a0001c0001t0030 a0001c0001t0035 a0001c0001t0043 a0001c0003t0003 a0001c0003t0012 a0001c0006t0002 a0001c0006t0004 a0001c0006t0031 a0001c0008t0009 a0001c0008t0016 a0001c0009t0010 a0001c0009t0018 a0001c0014t0032 a0002c0002t0001 a0002c0002t0004 a0002c0002t0026 a0002c0002t0028 a0002c0002t0040 a0002c0005t0001 a0002c0005t0004 a0002c0010t0023 a0002c0023t0010 a0005c0011t0002	a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0063 others(42): Show a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0063 a0001c0001t0001g0076 a0001c0001t0005g0026 a0001c0001t0005g0035 a0001c0001t0005g0089 a0001c0001t0006g0057 a0001c0001t0013g0090 a0001c0001t0014g0001 a0001c0001t0025g0004 a0001c0001t0030g0059 a0001c0001t0035g0082 a0001c0001t0043g0064 a0001c0003t0003g0080 a0001c0003t0012g0052 a0001c0003t0012g0053 a0001c0006t0002g0012 a0001c0006t0004g0013 a0001c0006t0004g0098 a0001c0006t0031g0024 a0001c0008t0009g0042 a0001c0008t0009g0100 a0001c0008t0016g0051 a0001c0009t0010g0110 a0001c0009t0018g0018 a0001c0014t0032g0028 a0002c0002t0001g0007 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0070 a0002c0002t0001g0074 a0002c0002t0004g0107 a0002c0002t0026g0094 a0002c0002t0028g0005 a0002c0002t0040g0078 a0002c0005t0001g0034 a0002c0005t0004g0038 a0002c0005t0004g0046 a0002c0005t0004g0077 a0002c0005t0004g0092 a0002c0010t0023g0081 a0002c0023t0010g0104 a0005c0011t0002g0087 a0005c0011t0002g0101	45	110	0.4091	-16	c.788 others(31): Show c.788-291_788-276delTGTGTGTGTGTGTGTG	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140490117	TACACACA others(9): Show TACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0003 a0002c0007t0003	a0002c0007t0003g0043 a0002c0007t0003g0043	1	110	0.0091	-16	c.134 others(37): Show c.1344+23416_1344+23431delCACACACACACACACA	CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN3_chr12_7125371_7163945	7137781	TGTGTGTG others(9): Show TGTGTGTGTGTGTGTGA	T T	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0098 a0001c0001t0013g0098	1	394	0.0025	-16	c.121 others(33): Show c.1211-172_1211-157delTGTGTGTGTGTGTGAG	CLSTN3	ENSG00000139182.15	transcript	ENST00000266546.11	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLSTN3_chr12_7125371_7163945	7148156	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG03017.hp2 HG02300.hp1 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0105 a0001c0001t0001g0107	2	394	0.0051	-16	c.184 others(33): Show c.1848-772_1848-757delGAAAGAAAGAAAGAAA	CLSTN3	ENSG00000139182.15	transcript	ENST00000266546.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLTB_chr5_176387501_176421539	176410032	TGAGGCTA others(9): Show TGAGGCTACTGCCCATC	T T	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0207 a0001c0001t0002g0207	1	406	0.0025	-16	c.234 others(31): Show c.234+209_234+224delGATGGGCAGTAGCCTC	CLTB	ENSG00000175416.16	transcript	ENST00000310418.9	protein_coding	2/5			chr5	TogoVar
CLTCL1_chr22_19174473_19296719	19219157	TTTTATTT others(9): Show TTTTATTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG01106.hp2 others(16): Show HG00733.hp2 HG00735.hp2 HG01106.hp2 HG01167.hp2 HG01169.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01433.hp2 HG02559.hp1 HG03471.hp1 NA18951.hp2 NA18955.hp1 NA18970.hp1 NA18985.hp2 NA18989.hp1 NA19056.hp1 NA19088.hp2 NA20752.hp1	a0004 a0008 a0017 a0004 a0008 a0017	a0004c0006 a0004c0017 a0008c0010 others(1): Show a0004c0006 a0004c0017 a0008c0010 a0017c0031	a0004c0006t0005 a0004c0017t0005 a0008c0010t0005 others(1): Show a0004c0006t0005 a0004c0017t0005 a0008c0010t0005 a0017c0031t0007	a0004c0006t0005g0010 a0004c0006t0005g0011 a0004c0006t0005g0012 others(16): Show a0004c0006t0005g0010 a0004c0006t0005g0011 a0004c0006t0005g0012 a0004c0006t0005g0013 a0004c0006t0005g0014 a0004c0006t0005g0015 a0004c0006t0005g0016 a0004c0006t0005g0017 a0004c0006t0005g0018 a0004c0006t0005g0022 a0004c0006t0005g0023 a0004c0006t0005g0024 a0004c0006t0005g0026 a0004c0017t0005g0025 a0008c0010t0005g0009 a0008c0010t0005g0019 a0008c0010t0005g0020 a0008c0010t0005g0021 a0017c0031t0007g0099	19	346	0.0549	-16	c.291 others(33): Show c.2919+712_2919+727delTAAATAAATAAATAAA	CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding	18/32			chr22	TogoVar
CLTRN_chrX_15622318_15669805	15630363	AGAAGGAA others(9): Show AGAAGGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02280.hp2 HG02970.hp2 others(5): Show HG01884.hp1 HG02280.hp2 HG02970.hp2 HG03195.hp2 HG03486.hp1 HG06807.hp1 NA18906.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0006 a0001c0001t0003 a0001c0001t0006	a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0033 others(5): Show a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0178 a0001c0001t0006g0040	8	295	0.0271	-16	c.513 others(33): Show c.513-2252_513-2237delCTTCCTTCCTTCCTTC	CLTRN	ENSG00000147003.7	transcript	ENST00000380342.4	protein_coding	5/5			chrX	TogoVar
CLUAP1_chr16_3496004_3544048	3529612	TATAATAT others(9): Show TATAATATTATATATTA	T T	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18973.hp2 NA18975.hp1 others(3): Show NA18968.hp2 NA18973.hp2 NA18975.hp1 NA18995.hp2 NA18998.hp2 NA19012.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0006 a0002c0002t0002 a0001c0001t0006 a0002c0002t0002	a0001c0001t0006g0173 a0002c0002t0002g0030 a0002c0002t0002g0078 others(2): Show a0001c0001t0006g0173 a0002c0002t0002g0030 a0002c0002t0002g0078 a0002c0002t0002g0296 a0002c0002t0002g0307	6	382	0.0157	-16	c.929 others(31): Show c.929-955_929-940delATAATATTATATATTA	CLUAP1	ENSG00000103351.13	transcript	ENST00000576634.6	protein_coding	9/11			chr16	TogoVar
CLUAP1_chr16_3496004_3544048	3529683	ATTATTAT others(9): Show ATTATTATATATTATAT	A A	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0301 a0002c0002t0002g0301	1	382	0.0026	-16	c.929 others(31): Show c.929-884_929-869delTTATTATATATTATAT	CLUAP1	ENSG00000103351.13	transcript	ENST00000576634.6	protein_coding	9/11			chr16	TogoVar
CLUH_chr17_2684387_2716764	2685622	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01109.hp1 others(7): Show HG01069.hp1 HG01071.hp2 HG01109.hp1 HG02523.hp2 HG02896.hp1 HG02897.hp2 HG06807.hp1 NA19077.hp1 NA19240.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0012 others(1): Show a0001c0001 a0001c0003 a0001c0012 a0002c0002	a0001c0001t0001 a0001c0003t0005 a0001c0012t0005 others(1): Show a0001c0001t0001 a0001c0003t0005 a0001c0012t0005 a0002c0002t0001	a0001c0001t0001g0008 a0001c0001t0001g0140 a0001c0001t0001g0141 others(4): Show a0001c0001t0001g0008 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0003t0005g0016 a0001c0012t0005g0038 a0002c0002t0001g0001 a0002c0002t0001g0004	10	420	0.0238	-16	c.49 others(27): Show c.4956_*4971delAAAAAAAAAAAAAAAA	CLUH	ENSG00000132361.18	transcript	ENST00000651024.2	protein_coding		3764		chr17	TogoVar
CLUH_chr17_2684387_2716764	2691943	CCGCCCCC others(9): Show CCGCCCCCGCCCCGCCA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01975.hp1 HG03540.hp2 others(4): Show HG00544.hp2 HG01975.hp1 HG03540.hp2 NA18961.hp2 NA18968.hp2 NA19009.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0001c0024	a0001c0001t0004 a0001c0003t0001 a0001c0005t0001 others(1): Show a0001c0001t0004 a0001c0003t0001 a0001c0005t0001 a0001c0024t0003	a0001c0001t0004g0212 a0001c0003t0001g0076 a0001c0003t0001g0077 others(4): Show a0001c0001t0004g0212 a0001c0003t0001g0076 a0001c0003t0001g0077 a0001c0003t0001g0078 a0001c0005t0001g0251 a0001c0005t0001g0252 a0001c0024t0003g0059	7	420	0.0167	-16	c.365 others(31): Show c.3654+45_3655-49delTGGCGGGGCGGGGGCG	CLUH	ENSG00000132361.18	transcript	ENST00000651024.2	protein_coding	23/25			chr17	TogoVar
CLUH_chr17_2684387_2716764	2691962	CCCCCGCC others(9): Show CCCCCGCCCCGCCCCCG	C C	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02615.hp1 HG01261.hp2 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0179 a0001c0003t0001g0292 a0001c0001t0001g0179 a0001c0003t0001g0292	2	420	0.0048	-16	c.365 others(31): Show c.3654+26_3654+41delCGGGGGCGGGGCGGGG	CLUH	ENSG00000132361.18	transcript	ENST00000651024.2	protein_coding	23/25			chr17	TogoVar
CLUL1_chr18_591988_655182	599809	GTAGTCCC others(9): Show GTAGTCCCAGCTACTCA	G G	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18980.hp2 NA19000.hp1 NA18962.hp2 NA18980.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0354 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0354	3	414	0.0073	-16	c.-13 others(35): Show c.-136+2697_-136+2712delTAGTCCCAGCTACTCA	CLUL1	ENSG00000079101.18	transcript	ENST00000692774.1	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
CLUL1_chr18_591988_655182	627006	GGAAAGAA others(9): Show GGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0008 a0001c0001t0002g0008	1	414	0.0024	-16	c.424 others(29): Show c.424-82_424-67delGAAAGAAAGAAAGAAA	CLUL1	ENSG00000079101.18	transcript	ENST00000692774.1	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
CLUL1_chr18_591988_655182	645810	AATATATA others(9): Show AATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 NA19043.hp2 HG01106.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0100 a0001c0001t0003g0313 a0001c0001t0002g0100 a0001c0001t0003g0313	2	414	0.0048	-16	c.139 others(33): Show c.1397+740_1397+755delATATATATATATATAT	CLUL1	ENSG00000079101.18	transcript	ENST00000692774.1	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
CLVS1_chr8_61282970_61506629	61347626	TTATATAT others(9): Show TTATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01243.hp1 HG02630.hp1 others(5): Show HG01099.hp2 HG01243.hp1 HG02630.hp1 HG02735.hp1 HG03669.hp2 NA18522.hp1 NA18988.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0014	a0001c0001t0001g0149 a0001c0001t0002g0091 a0001c0001t0002g0164 others(5): Show a0001c0001t0001g0149 a0001c0001t0002g0091 a0001c0001t0002g0164 a0001c0001t0003g0017 a0001c0001t0003g0080 a0001c0001t0003g0157 a0001c0001t0009g0013 a0001c0001t0014g0118	8	184	0.0435	-16	c.456 others(35): Show c.456-28937_456-28922delATATATATATATATAT	CLVS1	ENSG00000177182.11	transcript	ENST00000325897.5	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr8	TogoVar

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