Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTN5_chr11_99015949_100363885	100204297	AATATATA others(9): Show AATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0010 a0010	a0010c0010 a0010c0010	a0010c0010t0011 a0010c0010t0011	a0010c0010t0011g0009 a0010c0010t0011g0009	1	66	0.0152	-16	c.188 others(37): Show c.1884+10666_1884+10681delTATATATATATATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	15/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100291774	TAAATAAA others(9): Show TAAATAAATAAATAAAA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01169.hp2 HG03471.hp1 others(2): Show HG01099.hp1 HG01169.hp2 HG03471.hp1 NA18522.hp1 NA20300.hp1	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0008	a0001c0001 a0002c0002 a0006c0006 others(1): Show a0001c0001 a0002c0002 a0006c0006 a0008c0008	a0001c0001t0004 a0001c0001t0005 a0002c0002t0004 others(2): Show a0001c0001t0004 a0001c0001t0005 a0002c0002t0004 a0006c0006t0001 a0008c0008t0007	a0001c0001t0004g0010 a0001c0001t0005g0048 a0002c0002t0004g0007 others(2): Show a0001c0001t0004g0010 a0001c0001t0005g0048 a0002c0002t0004g0007 a0006c0006t0001g0005 a0008c0008t0007g0038	5	66	0.0758	-16	c.231 others(35): Show c.2315-5848_2315-5833delATAAATAAATAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	18/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1158801	TACACACA others(9): Show TACACACATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0058 a0001c0004t0001g0058	1	232	0.0043	-16	c.55+ others(33): Show c.55+10772_55+10787delCACACATATATATACA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1201099	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0183 a0001c0006t0001g0183	1	232	0.0043	-16	c.56- others(33): Show c.56-19556_56-19541delGTGTGTGTGTGTGTGT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1202543	AAAATAAA others(9): Show AAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0222 a0001c0007t0001g0222	1	232	0.0043	-16	c.56- others(33): Show c.56-18114_56-18099delAATAAATAAATAAATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1209730	GGTAAAAC others(9): Show GGTAAAACTGTGAGCCC	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00423.hp1 HG00639.hp1 others(30): Show HG00140.hp2 HG00423.hp1 HG00639.hp1 HG01074.hp1 HG01175.hp1 HG01255.hp2 HG01256.hp1 HG01261.hp2 HG01515.hp2 HG01517.hp1 HG01952.hp2 HG02040.hp1 HG02055.hp1 HG02074.hp2 HG02258.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02738.hp1 HG03130.hp2 HG03195.hp1 HG03516.hp1 NA18906.hp1 NA18949.hp2 NA18961.hp2 NA18980.hp2 NA19002.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0012 a0001c0020 a0001c0025 a0002c0014 a0003c0015	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0008t0001 a0001c0012t0001 a0001c0020t0001 a0001c0025t0001 a0002c0014t0001 a0003c0015t0001	a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0067 others(30): Show a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0067 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0107 a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0001t0002g0124 a0001c0002t0001g0209 a0001c0003t0001g0011 a0001c0003t0001g0030 a0001c0003t0001g0076 a0001c0003t0001g0077 a0001c0003t0001g0092 a0001c0003t0001g0118 a0001c0003t0001g0172 a0001c0003t0001g0177 a0001c0003t0001g0224 a0001c0003t0001g0225 a0001c0005t0001g0164 a0001c0006t0001g0183 a0001c0007t0001g0017 a0001c0007t0001g0052 a0001c0008t0001g0211 a0001c0008t0001g0212 a0001c0012t0001g0085 a0001c0020t0001g0151 a0001c0025t0001g0192 a0002c0014t0001g0220 a0003c0015t0001g0007 a0003c0015t0001g0008	33	232	0.1422	-16	c.56- others(33): Show c.56-10956_56-10941delGTAAAACTGTGAGCCC	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22		chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245221	TATATATA others(9): Show TATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0145 a0001c0002t0001g0145	1	232	0.0043	-16	c.358 others(35): Show c.358+17230_358+17245delTATATATATATATACA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1300449	CAGGAAGG others(9): Show CAGGAAGGAAGGAAGGA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp1 HG00642.hp1 others(39): Show HG00140.hp1 HG00639.hp1 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01109.hp1 HG01175.hp2 HG01256.hp1 HG01261.hp1 HG02015.hp2 HG02027.hp2 HG02074.hp1 HG02074.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02451.hp2 HG02602.hp2 HG03492.hp1 HG03834.hp2 HG04115.hp1 HG04204.hp2 NA18612.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18969.hp1 NA18980.hp2 NA19000.hp2 NA19002.hp1 NA19065.hp1 NA20129.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0001c0004t0002 a0001c0004t0005 a0001c0005t0001 a0001c0008t0001	a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0033 others(39): Show a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0033 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0067 a0001c0001t0001g0082 a0001c0001t0001g0097 a0001c0001t0001g0107 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0141 a0001c0001t0001g0149 a0001c0001t0001g0173 a0001c0001t0001g0204 a0001c0001t0002g0124 a0001c0002t0001g0068 a0001c0002t0001g0084 a0001c0002t0001g0116 a0001c0002t0001g0122 a0001c0002t0001g0125 a0001c0002t0001g0136 a0001c0002t0002g0020 a0001c0002t0002g0021 a0001c0003t0001g0074 a0001c0003t0001g0076 a0001c0003t0001g0077 a0001c0003t0001g0081 a0001c0003t0001g0092 a0001c0003t0001g0166 a0001c0004t0001g0034 a0001c0004t0001g0058 a0001c0004t0001g0061 a0001c0004t0001g0066 a0001c0004t0001g0073 a0001c0004t0001g0127 a0001c0004t0002g0038 a0001c0004t0002g0039 a0001c0004t0005g0110 a0001c0005t0001g0157 a0001c0008t0001g0120	42	232	0.1810	-16	c.761 others(33): Show c.761+2488_761+2503delGGAAGGAAGGAAGGAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1300557	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01258.hp2 others(16): Show HG01070.hp1 HG01071.hp2 HG01258.hp2 HG02132.hp1 HG02523.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02922.hp1 HG02970.hp2 HG03209.hp1 HG03927.hp2 NA18972.hp2 NA18979.hp2 NA19000.hp1 NA19030.hp1 NA19065.hp2 NA19084.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0023	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(5): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 a0001c0006t0001 a0001c0008t0001 a0001c0009t0001 a0001c0023t0001	a0001c0001t0001g0035 a0001c0001t0001g0044 a0001c0002t0001g0018 others(16): Show a0001c0001t0001g0035 a0001c0001t0001g0044 a0001c0002t0001g0018 a0001c0002t0001g0053 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0003t0001g0140 a0001c0003t0001g0165 a0001c0003t0001g0168 a0001c0003t0001g0226 a0001c0005t0001g0005 a0001c0005t0001g0016 a0001c0005t0001g0106 a0001c0005t0001g0180 a0001c0005t0001g0203 a0001c0006t0001g0162 a0001c0008t0001g0214 a0001c0009t0001g0150 a0001c0023t0001g0186	19	232	0.0819	-16	c.761 others(33): Show c.761+2600_761+2615delAAGAAAGAAAGAAAGA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1357848	ATAAATGC others(9): Show ATAAATGCACATTTATG	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02257.hp1 HG02486.hp2 others(6): Show HG02109.hp1 HG02257.hp1 HG02486.hp2 HG02809.hp1 HG03130.hp2 HG03225.hp1 HG03471.hp1 HG06807.hp1 NA19030.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0002 a0001c0005 a0001c0006 others(6): Show a0001c0002 a0001c0005 a0001c0006 a0001c0009 a0001c0010 a0001c0013 a0001c0025 a0002c0011 a0006c0027	a0001c0002t0009 a0001c0005t0001 a0001c0006t0001 others(6): Show a0001c0002t0009 a0001c0005t0001 a0001c0006t0001 a0001c0009t0001 a0001c0010t0001 a0001c0013t0001 a0001c0025t0001 a0002c0011t0001 a0006c0027t0001	a0001c0002t0009g0205 a0001c0005t0001g0159 a0001c0006t0001g0185 others(6): Show a0001c0002t0009g0205 a0001c0005t0001g0159 a0001c0006t0001g0185 a0001c0009t0001g0150 a0001c0010t0001g0009 a0001c0013t0001g0208 a0001c0025t0001g0192 a0002c0011t0001g0006 a0006c0027t0001g0191	9	232	0.0388	-16	c.149 others(35): Show c.1492+5418_1492+5433delTGCACATTTATGTAAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	12/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTNAP2_chr7_146111801_148425998	146151666	ATATATAT others(9): Show ATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0014 a0001c0006t0014	a0001c0006t0014g0033 a0001c0006t0014g0033	1	40	0.0250	-16	c.97+ others(33): Show c.97+34739_97+34754delATGTATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146285864	CCCCCCTC others(9): Show CCCCCCTCCCTTCCCCT	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0026 a0001c0012t0004g0026	1	40	0.0250	-16	c.97+ others(35): Show c.97+168898_97+168913delCCCTTCCCCTCCCCCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146477624	AACACACA others(9): Show AACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02896.hp2 HG02897.hp2 HG02451.hp1 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0001 a0001c0004t0003 a0001c0002t0001 a0001c0004t0003	a0001c0002t0001g0007 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0002t0001g0007 a0001c0004t0003g0035 a0001c0004t0003g0036	3	40	0.0750	-16	c.98- others(35): Show c.98-296611_98-296596delCACACACACACACACA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146555492	GTCTGTCT others(9): Show GTCTGTCTATCTATCTA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02922.hp2 HG02451.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0002 a0001c0004t0005 a0001c0001t0002 a0001c0004t0005	a0001c0001t0002g0006 a0001c0004t0005g0004 a0001c0001t0002g0006 a0001c0004t0005g0004	2	40	0.0500	-16	c.98- others(35): Show c.98-218775_98-218760delGTCTATCTATCTATCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146622243	ATATCTAT others(9): Show ATATCTATCTATCTATC	A A	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp2 HG03540.hp1 others(1): Show HG03098.hp1 HG03098.hp2 HG03540.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0002t0001 a0001c0002t0010 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0010 a0001c0003t0004	a0001c0001t0001g0003 a0001c0002t0001g0021 a0001c0002t0010g0002 others(1): Show a0001c0001t0001g0003 a0001c0002t0001g0021 a0001c0002t0010g0002 a0001c0003t0004g0029	4	40	0.1000	-16	c.98- others(35): Show c.98-152004_98-151989delCTATCTATCTATCTAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146622267	CTATCTAT others(9): Show CTATCTATCTATCTATA	C C	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0025 a0001c0008t0001g0025	1	40	0.0250	-16	c.98- others(35): Show c.98-152000_98-151985delCTATCTATCTATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146761284	TGGAAGGA others(9): Show TGGAAGGAAGGAAGGAA	T T	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02897.hp2 others(1): Show HG02896.hp2 HG02897.hp1 HG02897.hp2 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0010 a0001c0002 a0001c0004 a0001c0010	a0001c0002t0001 a0001c0004t0003 a0001c0010t0002 a0001c0002t0001 a0001c0004t0003 a0001c0010t0002	a0001c0002t0001g0008 a0001c0004t0003g0035 a0001c0004t0003g0036 others(1): Show a0001c0002t0001g0008 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0010t0002g0014	4	40	0.1000	-16	c.98- others(33): Show c.98-12950_98-12935delGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146855807	GTATATAT others(9): Show GTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0008 a0001c0005t0008	a0001c0005t0008g0005 a0001c0005t0008g0005	1	40	0.0250	-16	c.402 others(35): Show c.402+15934_402+15949delTATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146856261	TATAGATA others(9): Show TATAGATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02451.hp1 HG02717.hp1 others(5): Show HG01891.hp1 HG02451.hp1 HG02717.hp1 HG02717.hp2 HG02886.hp1 HG02922.hp2 HG03139.hp2 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0003 a0001c0004 others(5): Show a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0010 a0001c0011 a0002c0017 a0004c0014	a0001c0002t0001 a0001c0003t0013 a0001c0004t0005 others(5): Show a0001c0002t0001 a0001c0003t0013 a0001c0004t0005 a0001c0005t0008 a0001c0010t0002 a0001c0011t0016 a0002c0017t0015 a0004c0014t0021	a0001c0002t0001g0007 a0001c0003t0013g0010 a0001c0004t0005g0004 others(5): Show a0001c0002t0001g0007 a0001c0003t0013g0010 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0010t0002g0014 a0001c0011t0016g0019 a0002c0017t0015g0037 a0004c0014t0021g0022	8	40	0.2000	-16	c.402 others(35): Show c.402+16381_402+16396delGATAGATAGATAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146856297	GATACATA others(9): Show GATACATACATACATAC	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0006 a0001c0001t0002g0006	1	40	0.0250	-16	c.402 others(35): Show c.402+16425_402+16440delCATACATACATACATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146947553	GTGTGTAT others(9): Show GTGTGTATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA21309.hp1 NA19030.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0001 a0001c0010t0002 a0001c0001t0001 a0001c0010t0002	a0001c0001t0001g0038 a0001c0010t0002g0014 a0001c0001t0001g0038 a0001c0010t0002g0014	2	40	0.0500	-16	c.403 others(35): Show c.403-96352_403-96337delGTGTATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146947560	TATATATA others(9): Show TATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0021 a0001c0002t0001g0021	1	40	0.0250	-16	c.403 others(35): Show c.403-96331_403-96316delCATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147104873	CATATATA others(9): Show CATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02976.hp1 HG02717.hp2 HG02976.hp1	a0001 a0001	a0001c0005 a0001c0015 a0001c0005 a0001c0015	a0001c0005t0008 a0001c0015t0001 a0001c0005t0008 a0001c0015t0001	a0001c0005t0008g0005 a0001c0015t0001g0011 a0001c0005t0008g0005 a0001c0015t0001g0011	2	40	0.0500	-16	c.551 others(33): Show c.551-3245_551-3230delATATATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147149035	CGCTGCTG others(9): Show CGCTGCTGGCTGGGGTG	C C	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0029 a0001c0003t0004g0029	1	40	0.0250	-16	c.134 others(37): Show c.1348+16546_1348+16561delGCTGGCTGGGGTGGCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147225742	AGAAGGAA others(9): Show AGAAGGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp2 HG02922.hp1 others(1): Show HG02886.hp1 HG02886.hp2 HG02922.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0001c0011	a0001c0001t0012 a0001c0003t0013 a0001c0005t0022 others(1): Show a0001c0001t0012 a0001c0003t0013 a0001c0005t0022 a0001c0011t0016	a0001c0001t0012g0034 a0001c0003t0013g0010 a0001c0005t0022g0032 others(1): Show a0001c0001t0012g0034 a0001c0003t0013g0010 a0001c0005t0022g0032 a0001c0011t0016g0019	4	40	0.1000	-16	c.134 others(37): Show c.1349-74355_1349-74340delGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147225830	GGAAGGAA others(9): Show GGAAGGAAGGAGGGAAA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03225.hp2 HG03540.hp1 others(2): Show HG02451.hp2 HG03225.hp2 HG03540.hp1 NA18522.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0013 a0001c0018	a0001c0001t0002 a0001c0002t0010 a0001c0003t0023 others(2): Show a0001c0001t0002 a0001c0002t0010 a0001c0003t0023 a0001c0013t0003 a0001c0018t0002	a0001c0001t0002g0006 a0001c0002t0010g0002 a0001c0003t0023g0030 others(2): Show a0001c0001t0002g0006 a0001c0002t0010g0002 a0001c0003t0023g0030 a0001c0013t0003g0039 a0001c0018t0002g0012	5	40	0.1250	-16	c.134 others(37): Show c.1349-74268_1349-74253delGGGAAAGAAGGAAGGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147237049	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0006 a0001c0019t0006	a0001c0019t0006g0015 a0001c0019t0006g0015	1	40	0.0250	-16	c.134 others(37): Show c.1349-63071_1349-63056delTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147301592	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG03225.hp1 HG02897.hp1 HG03225.hp1	a0001 a0001	a0001c0002 a0001c0009 a0001c0002 a0001c0009	a0001c0002t0001 a0001c0009t0019 a0001c0002t0001 a0001c0009t0019	a0001c0002t0001g0008 a0001c0009t0019g0027 a0001c0002t0001g0008 a0001c0009t0019g0027	2	40	0.0500	-16	c.149 others(35): Show c.1498+1340_1498+1355delGTGTGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147368096	TCACACAC others(9): Show TCACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp1 HG03225.hp1 HG02451.hp2 HG02897.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 a0001c0001 a0001c0002 a0001c0009	a0001c0001t0002 a0001c0002t0001 a0001c0009t0019 a0001c0001t0002 a0001c0002t0001 a0001c0009t0019	a0001c0001t0002g0006 a0001c0002t0001g0008 a0001c0009t0019g0027 a0001c0001t0002g0006 a0001c0002t0001g0008 a0001c0009t0019g0027	3	40	0.0750	-16	c.149 others(37): Show c.1499-27492_1499-27477delCACACACACACACACA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147902798	GTGTGTGT others(9): Show GTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02897.hp1 HG03098.hp2 others(1): Show HG00735.hp1 HG02897.hp1 HG03098.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0006 a0001c0002 a0001c0006	a0001c0002t0001 a0001c0002t0002 a0001c0006t0014 a0001c0002t0001 a0001c0002t0002 a0001c0006t0014	a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0002g0040 others(1): Show a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0002g0040 a0001c0006t0014g0033	4	40	0.1000	-16	c.209 others(33): Show c.2099-751_2099-736delATGTGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148061954	TATAGATA others(9): Show TATAGATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02717.hp2 HG01891.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0006 a0001c0005t0008 a0001c0001t0006 a0001c0005t0008	a0001c0001t0006g0009 a0001c0005t0008g0005 a0001c0001t0006g0009 a0001c0005t0008g0005	2	40	0.0500	-16	c.238 others(37): Show c.2384-56125_2384-56110delAGATAGATAGATAGAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148137669	AAAGGAAG others(9): Show AAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02976.hp1 HG03139.hp2 others(1): Show HG02486.hp1 HG02976.hp1 HG03139.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0011 others(1): Show a0001c0001 a0001c0010 a0001c0011 a0001c0015	a0001c0001t0007 a0001c0010t0002 a0001c0011t0016 others(1): Show a0001c0001t0007 a0001c0010t0002 a0001c0011t0016 a0001c0015t0001	a0001c0001t0007g0020 a0001c0010t0002g0014 a0001c0011t0016g0019 others(1): Show a0001c0001t0007g0020 a0001c0010t0002g0014 a0001c0011t0016g0019 a0001c0015t0001g0011	4	40	0.1000	-16	c.255 others(35): Show c.2555-9769_2555-9754delAAGGAAGGAAGGAAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148283304	AAAGGAAG others(9): Show AAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0004 a0001c0004t0005g0004	1	40	0.0250	-16	c.347 others(37): Show c.3475+16181_3475+16196delGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148297165	AAAGGAAG others(9): Show AAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 NA20129.hp2 HG02717.hp2 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0023 a0001c0005t0008 a0001c0003t0023 a0001c0005t0008	a0001c0003t0023g0030 a0001c0005t0008g0005 a0001c0003t0023g0030 a0001c0005t0008g0005	2	40	0.0500	-16	c.347 others(37): Show c.3475+30066_3475+30081delGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148305222	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG03540.hp2 others(2): Show HG02896.hp2 HG02897.hp2 HG03540.hp2 NA19030.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0002c0016	a0001c0001t0001 a0001c0003t0004 a0001c0004t0003 others(1): Show a0001c0001t0001 a0001c0003t0004 a0001c0004t0003 a0002c0016t0004	a0001c0001t0001g0038 a0001c0003t0004g0029 a0001c0004t0003g0035 others(2): Show a0001c0001t0001g0038 a0001c0003t0004g0029 a0001c0004t0003g0035 a0001c0004t0003g0036 a0002c0016t0004g0024	5	40	0.1250	-16	c.347 others(37): Show c.3475+38111_3475+38126delAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP3_chr9_39059710_39293167	39077559	AAAACAAA others(9): Show AAAACAAACAAACAAAC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0002 a0001c0001t0003g0002	1	4	0.2500	-16	c.374 others(33): Show c.3745+810_3745+825delGTTTGTTTGTTTGTTT	CNTNAP3	ENSG00000106714.18	transcript	ENST00000297668.11	protein_coding	23/23		chr9	TogoVar
CNTNAP3_chr9_39059710_39293167	39096985	GTATTTTC others(9): Show GTATTTTCAATTACGTA	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp2 HG02109.hp1 HG02109.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0004 a0001c0001t0003 a0002c0003t0004	a0001c0001t0003g0002 a0002c0003t0004g0001 a0001c0001t0003g0002 a0002c0003t0004g0001	2	4	0.5000	-16	c.299 others(35): Show c.2995+2910_2995+2925delTACGTAATTGAAAATA	CNTNAP3	ENSG00000106714.18	transcript	ENST00000297668.11	protein_coding	18/23		chr9	TogoVar
CNTNAP4_chr16_76272401_76565757	76298486	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02717.hp2 HG03041.hp1 HG02615.hp2 HG02717.hp2 HG03041.hp1	a0003 a0007 a0017 a0003 a0007 a0017	a0003c0006 a0007c0013 a0017c0036 a0003c0006 a0007c0013 a0017c0036	a0003c0006t0005 a0007c0013t0002 a0017c0036t0004 a0003c0006t0005 a0007c0013t0002 a0017c0036t0004	a0003c0006t0005g0131 a0007c0013t0002g0210 a0017c0036t0004g0248 a0003c0006t0005g0131 a0007c0013t0002g0210 a0017c0036t0004g0248	3	274	0.0110	-16	c.86- others(33): Show c.86-17898_86-17883delTGTGTGTGTGTGTGTG	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76355840	TTTTATTT others(9): Show TTTTATTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0006 a0001c0004t0001g0006	1	274	0.0037	-16	c.390 others(31): Show c.390+365_390+380delATTTATTTATTTATTT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76355876	ATTTATTT others(9): Show ATTTATTTATTTATTTT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02145.hp2 HG02280.hp1 others(3): Show HG02055.hp1 HG02145.hp2 HG02280.hp1 HG02647.hp2 HG03453.hp2 HG03579.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0014 a0001c0001 a0002c0002 a0002c0014	a0001c0001t0004 a0002c0002t0002 a0002c0002t0010 others(1): Show a0001c0001t0004 a0002c0002t0002 a0002c0002t0010 a0002c0014t0013	a0001c0001t0004g0051 a0001c0001t0004g0053 a0002c0002t0002g0206 others(3): Show a0001c0001t0004g0051 a0001c0001t0004g0053 a0002c0002t0002g0206 a0002c0002t0010g0204 a0002c0014t0013g0054 a0002c0014t0013g0263	6	274	0.0219	-16	c.390 others(31): Show c.390+367_390+382delTTATTTATTTATTTTT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76376907	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG02015.hp2 HG02155.hp1 others(7): Show HG00673.hp1 HG02015.hp2 HG02155.hp1 NA18906.hp2 NA18955.hp1 NA18994.hp2 NA19009.hp1 NA19011.hp2 NA19062.hp1 NA19085.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0008 a0023	a0001c0004 a0002c0005 a0003c0003 others(3): Show a0001c0004 a0002c0005 a0003c0003 a0005c0008 a0008c0017 a0023c0024	a0001c0004t0001 a0002c0005t0004 a0003c0003t0005 others(3): Show a0001c0004t0001 a0002c0005t0004 a0003c0003t0005 a0005c0008t0001 a0008c0017t0002 a0023c0024t0001	a0001c0004t0001g0155 a0002c0005t0004g0132 a0003c0003t0005g0047 others(7): Show a0001c0004t0001g0155 a0002c0005t0004g0132 a0003c0003t0005g0047 a0005c0008t0001g0060 a0005c0008t0001g0061 a0005c0008t0001g0108 a0005c0008t0001g0220 a0005c0008t0001g0221 a0008c0017t0002g0214 a0023c0024t0001g0096	10	274	0.0365	-16	c.390 others(35): Show c.390+21428_390+21443delGTGTGTGTGTGTGTGT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76397938	TTATATAC others(9): Show TTATATACATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01934.hp1 HG03491.hp2 others(6): Show HG00423.hp2 HG01934.hp1 HG03491.hp2 HG04115.hp2 HG04204.hp1 HG04204.hp2 NA18522.hp2 NA19010.hp2 NA19085.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0002c0005 others(2): Show a0001c0001 a0002c0002 a0002c0005 a0003c0003 a0004c0027	a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 others(4): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 a0002c0002t0004 a0002c0005t0002 a0003c0003t0018 a0004c0027t0002	a0001c0001t0001g0081 a0001c0001t0001g0105 a0001c0001t0001g0123 others(6): Show a0001c0001t0001g0081 a0001c0001t0001g0105 a0001c0001t0001g0123 a0001c0001t0003g0064 a0002c0002t0002g0059 a0002c0002t0004g0138 a0002c0005t0002g0257 a0003c0003t0018g0164 a0004c0027t0002g0234	9	274	0.0329	-16	c.391 others(35): Show c.391-29507_391-29492delCATATATATATATATA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP5_chr2_124020287_124926219	124042783	CATCTATC others(9): Show CATCTATCTATCTATCT	C C	intron_variant intron_variant	MODIFIER	HG02897.hp2 NA21309.hp2 HG02897.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0024 a0001c0002t0001g0054 a0001c0001t0002g0024 a0001c0002t0001g0054	2	64	0.0313	-16	c.82+ others(33): Show c.82+17083_82+17098delTATCTATCTATCTATC	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124148774	CATATGTG others(9): Show CATATGTGTGTATACAT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01069.hp2 HG01070.hp1 others(24): Show HG00423.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01261.hp1 HG01891.hp1 HG01891.hp2 HG02257.hp2 HG02293.hp1 HG02451.hp1 HG02698.hp2 HG02723.hp2 HG02897.hp1 HG02897.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03453.hp2 HG03704.hp1 HG03704.hp2 NA18906.hp2 NA19000.hp2 NA19240.hp1 NA20129.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0006	a0001c0001 a0001c0002 a0004c0006 others(2): Show a0001c0001 a0001c0002 a0004c0006 a0005c0005 a0006c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0015 a0001c0001t0017 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0004c0006t0001 a0005c0005t0001 a0006c0003t0008	a0001c0001t0001g0010 a0001c0001t0001g0020 a0001c0001t0001g0026 others(24): Show a0001c0001t0001g0010 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0043 a0001c0001t0002g0024 a0001c0001t0002g0042 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0003g0057 a0001c0001t0004g0053 a0001c0001t0005g0040 a0001c0001t0006g0025 a0001c0001t0007g0039 a0001c0001t0009g0061 a0001c0001t0015g0036 a0001c0001t0017g0012 a0001c0002t0001g0046 a0001c0002t0001g0054 a0001c0002t0001g0059 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0005g0045 a0001c0002t0007g0009 a0004c0006t0001g0013 a0005c0005t0001g0008 a0006c0003t0008g0035	27	64	0.4219	-16	c.83- others(33): Show c.83-72914_83-72899delATATGTGTGTATACAT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124178907	GTTATTTA others(9): Show GTTATTTATTTATTTAT	G G	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02717.hp1 HG02922.hp1 others(1): Show HG02145.hp1 HG02717.hp1 HG02922.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0002t0010 a0001c0001t0001 a0001c0002t0002 a0001c0002t0010	a0001c0001t0001g0033 a0001c0001t0001g0043 a0001c0002t0002g0031 others(1): Show a0001c0001t0001g0033 a0001c0001t0001g0043 a0001c0002t0002g0031 a0001c0002t0010g0032	4	64	0.0625	-16	c.83- others(33): Show c.83-42763_83-42748delATTTATTTATTTATTT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124194396	TATATATA others(9): Show TATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0008 a0005c0005t0001g0008	1	64	0.0156	-16	c.83- others(33): Show c.83-27303_83-27288delTATATATATAAATATA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124226505	CCTTATGA others(9): Show CCTTATGAGATATTCGG	C C	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0021 a0001c0001t0018g0021	1	64	0.0156	-16	c.187 others(33): Show c.187+4700_187+4715delATGAGATATTCGGCTT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	2/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124274129	CTGTTTTT others(9): Show CTGTTTTTGTTTTGCTT	C C	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0001 a0002c0004t0001g0001	1	64	0.0156	-16	c.381 others(35): Show c.381+31746_381+31761delTTTGCTTTGTTTTTGT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124290874	CTTTATTT others(9): Show CTTTATTTATTTATTTA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG01261.hp2 others(20): Show HG00423.hp1 HG00423.hp2 HG01261.hp2 HG01891.hp1 HG02257.hp2 HG02451.hp2 HG02723.hp2 HG02886.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03471.hp1 HG03471.hp2 HG03704.hp2 NA18906.hp1 NA19000.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp2 NA21309.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0006c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006 a0001c0002t0007 a0001c0002t0011 a0001c0002t0012 a0002c0004t0001 a0006c0003t0008	a0001c0001t0001g0010 a0001c0001t0001g0026 a0001c0001t0002g0019 others(20): Show a0001c0001t0001g0010 a0001c0001t0001g0026 a0001c0001t0002g0019 a0001c0001t0002g0024 a0001c0001t0003g0057 a0001c0001t0004g0052 a0001c0001t0005g0040 a0001c0001t0009g0061 a0001c0001t0013g0041 a0001c0001t0014g0037 a0001c0001t0017g0012 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0064 a0001c0002t0002g0030 a0001c0002t0002g0034 a0001c0002t0002g0060 a0001c0002t0006g0028 a0001c0002t0007g0009 a0001c0002t0011g0029 a0001c0002t0012g0018 a0002c0004t0001g0001 a0006c0003t0008g0035	23	64	0.3594	-16	c.381 others(35): Show c.381+48509_381+48524delATTTATTTATTTATTT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124419896	TTTTCTTT others(9): Show TTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0009 a0001c0002t0007g0009	1	64	0.0156	-16	c.529 others(33): Show c.529+2351_529+2366delTTTCTTTCTTTCTTTC	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr2	TogoVar

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