regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COL5A1_chr9_134636803_134849843 | 134654406 | TGTGTGTA others(9): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01074.hp2 HG01175.hp2 others(20): Show |
a0001a0002a0010 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(15): Show | a0001c0001t0001g0041a0001c0001t0002g0220a0001c0001t0005g0055others(20): Show | 23 | 272 | 0.0846 | -16 | c.109 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134654868 | CTAGGGCT others(9): Show |
C | intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0260 | 1 | 272 | 0.0037 | -16 | c.109 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134687415 | TCATCCAT others(9): Show |
T | intron_variant | MODIFIER | HG03139.hp1 NA19030.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0014 | a0001c0001t0001g0212a0001c0003t0014g0247 | 2 | 272 | 0.0074 | -16 | c.110 others(33): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134712622 | TTCCTTCC others(9): Show |
T | intron_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0003 | a0001c0003t0014 | a0001c0003t0014g0247 | 1 | 272 | 0.0037 | -16 | c.654 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 4/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134733689 | GCCTGGGC others(9): Show |
G | intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0003 | a0001c0003t0008 | a0001c0003t0008g0187 | 1 | 272 | 0.0037 | -16 | c.138 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 9/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134747913 | GCACACAT others(9): Show |
G | intron_variant | MODIFIER | HG02109.hp2 NA19043.hp1 |
a0001 | a0001c0001a0001c0065 | a0001c0001t0004a0001c0065t0003 | a0001c0001t0004g0102a0001c0065t0003g0009 | 2 | 272 | 0.0074 | -16 | c.149 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 11/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134788618 | GAGATAGA others(9): Show |
G | intron_variant | MODIFIER | HG01891.hp2 HG02257.hp2 HG02896.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003a0001c0016others(1): Show | a0001c0001t0001a0001c0001t0012a0001c0003t0025others(4): Show | a0001c0001t0001g0033a0001c0001t0012g0242a0001c0003t0025g0043others(5): Show | 8 | 272 | 0.0294 | -16 | c.264 others(33): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 31/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134846775 | TATCCATC others(9): Show |
T | downstream_gene_variant | MODIFIER | HG00642.hp2 HG01081.hp1 HG02109.hp2 others(14): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(9): Show | a0001c0001t0004a0001c0003t0004a0001c0003t0010others(11): Show | a0001c0001t0004g0102a0001c0003t0004g0262a0001c0003t0004g0266others(14): Show | 17 | 272 | 0.0625 | -16 | c.*44 others(27): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1933 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134846980 | CCATCTAT others(9): Show |
C | downstream_gene_variant | MODIFIER | HG01891.hp2 HG02109.hp1 HG02895.hp2 others(2): Show |
a0001a0011 | a0001c0001a0001c0006a0001c0016others(2): Show | a0001c0001t0012a0001c0006t0048a0001c0016t0012others(2): Show | a0001c0001t0012g0242a0001c0006t0048g0047a0001c0016t0012g0021others(2): Show | 5 | 272 | 0.0184 | -16 | c.*46 others(27): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 2138 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134849653 | CTCCCAGC others(9): Show |
C | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02965.hp1 HG03041.hp2 others(1): Show |
a0001 | a0001c0001a0001c0024a0001c0044others(1): Show | a0001c0001t0001a0001c0024t0001a0001c0044t0057others(1): Show | a0001c0001t0001g0033a0001c0024t0001g0207a0001c0044t0057g0042others(1): Show | 4 | 272 | 0.0147 | -16 | c.*73 others(27): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 4811 | chr9 | TogoVar | ||||||
COL5A2_chr2_189026898_189184761 | 189157117 | GATATATC others(9): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00408.hp2 others(121): Show |
a0001a0003a0004others(6): Show | a0001c0001a0001c0002a0001c0004others(14): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(22): Show | a0001c0001t0001g0001a0001c0001t0001g0010a0001c0001t0001g0011others(117): Show | 124 | 248 | 0.5000 | -16 | c.97+ others(33): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 1/53 | chr2 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9964854 | TAAAAAAA others(9): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00423.hp2 others(46): Show |
a0001a0002a0004others(9): Show | a0001c0001a0002c0002a0002c0020others(20): Show | a0001c0001t0004a0002c0002t0001a0002c0002t0002others(26): Show | a0001c0001t0004g0084a0002c0002t0001g0313a0002c0002t0001g0315others(46): Show | 49 | 412 | 0.1189 | -16 | c.478 others(35): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 64/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9970093 | GGCTGAGT others(9): Show |
G | intron_variant | MODIFIER | HG00609.hp2 HG00621.hp1 HG01069.hp2 others(27): Show |
a0009a0010a0035others(3): Show | a0009c0007a0009c0048a0010c0015others(8): Show | a0009c0007t0001a0009c0007t0005a0009c0007t0010others(15): Show | a0009c0007t0001g0220a0009c0007t0001g0221a0009c0007t0001g0229others(27): Show | 30 | 412 | 0.0728 | -16 | c.393 others(33): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 54/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9977947 | CATATATA others(9): Show |
C | intron_variant | MODIFIER | HG02056.hp1 HG02109.hp1 HG02486.hp2 others(11): Show |
a0002a0006a0013others(6): Show | a0002c0002a0002c0034a0006c0082others(9): Show | a0002c0002t0001a0002c0034t0002a0006c0082t0007others(9): Show | a0002c0002t0001g0319a0002c0034t0002g0121a0006c0082t0007g0169others(11): Show | 14 | 412 | 0.0340 | -16 | c.301 others(33): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 41/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9983529 | GAAGAAAG others(9): Show |
G | intron_variant | MODIFIER | HG00735.hp1 HG01081.hp1 HG01192.hp1 others(26): Show |
a0001a0005a0006others(12): Show | a0001c0001a0001c0003a0001c0057others(16): Show | a0001c0001t0001a0001c0003t0001a0001c0057t0001others(16): Show | a0001c0001t0001g0079a0001c0001t0001g0088a0001c0001t0001g0253others(26): Show | 29 | 412 | 0.0704 | -16 | c.240 others(35): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 31/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9994559 | CATATATA others(9): Show |
C | intron_variant | MODIFIER | NA18939.hp2 | a0040 | a0040c0068 | a0040c0068t0003 | a0040c0068t0003g0172 | 1 | 412 | 0.0024 | -16 | c.158 others(33): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 16/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9999018 | CTTTCTTT others(9): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02109.hp1 others(15): Show |
a0006a0013a0022others(2): Show | a0006c0022a0013c0008a0022c0030others(2): Show | a0006c0022t0007a0006c0022t0011a0013c0008t0001others(3): Show | a0006c0022t0007g0288a0006c0022t0007g0289a0006c0022t0007g0290others(15): Show | 18 | 412 | 0.0437 | -16 | c.111 others(33): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 8/66 | chr19 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237332070 | CATATATA others(9): Show |
C | intron_variant | MODIFIER | HG00673.hp2 HG00738.hp2 HG01074.hp2 others(6): Show |
a0002a0004a0007 | a0002c0001a0002c0009a0004c0003others(1): Show | a0002c0001t0001a0002c0009t0001a0002c0009t0003others(2): Show | a0002c0001t0001g0032a0002c0001t0001g0033a0002c0001t0001g0240others(6): Show | 9 | 322 | 0.0280 | -16 | c.932 others(35): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 42/43 | chr2 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237343514 | CAAAAAAA others(9): Show |
C | intron_variant | MODIFIER | HG02027.hp1 HG02109.hp2 HG03098.hp1 |
a0002a0011a0071 | a0002c0001a0011c0070a0071c0138 | a0002c0001t0001a0011c0070t0011a0071c0138t0001 | a0002c0001t0001g0243a0011c0070t0011g0139a0071c0138t0001g0166 | 3 | 322 | 0.0093 | -16 | c.766 others(33): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 36/43 | chr2 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237391504 | CTGTTTGT others(9): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG02257.hp1 HG02647.hp2 others(9): Show |
a0003a0009a0010others(6): Show | a0003c0005a0009c0126a0010c0018others(6): Show | a0003c0005t0007a0009c0126t0004a0010c0018t0003others(7): Show | a0003c0005t0007g0023a0009c0126t0004g0179a0010c0018t0003g0052others(9): Show | 12 | 322 | 0.0373 | -16 | c.709 others(33): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 3/43 | chr2 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130362314 | ATATATAT others(9): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG02683.hp1 |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0002a0004c0003t0002 | a0001c0001t0002g0198a0004c0003t0002g0197 | 2 | 292 | 0.0069 | -16 | c.-28 others(35): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130362316 | ATATATAT others(9): Show |
A | intron_variant | MODIFIER | HG00280.hp1 HG01106.hp1 HG01123.hp2 others(15): Show |
a0004a0005a0009others(7): Show | a0004c0003a0005c0006a0009c0009others(7): Show | a0004c0003t0002a0005c0006t0007a0009c0009t0002others(7): Show | a0004c0003t0002g0194a0005c0006t0007g0007a0009c0009t0002g0096others(13): Show | 18 | 292 | 0.0616 | -16 | c.-28 others(35): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130362318 | ATATATAT others(9): Show |
A | intron_variant | MODIFIER | HG01943.hp2 | a0004 | a0004c0003 | a0004c0003t0002 | a0004c0003t0002g0193 | 1 | 292 | 0.0034 | -16 | c.-28 others(35): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130561634 | CTTTTTTT others(9): Show |
C | intron_variant | MODIFIER | HG00735.hp2 | a0019 | a0019c0021 | a0019c0021t0003 | a0019c0021t0003g0198 | 1 | 264 | 0.0038 | -16 | c.64+ others(31): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 2/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130590295 | ATATATTT others(9): Show |
A | intron_variant | MODIFIER | NA18960.hp1 | a0011 | a0011c0008 | a0011c0008t0001 | a0011c0008t0001g0154 | 1 | 264 | 0.0038 | -16 | c.421 others(33): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 12/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130590297 | ATATTTTT others(9): Show |
A | intron_variant | MODIFIER | HG03704.hp2 | a0011 | a0011c0008 | a0011c0008t0001 | a0011c0008t0001g0012 | 1 | 264 | 0.0038 | -16 | c.421 others(33): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 12/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130590299 | ATTTTTTT others(9): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG02486.hp1 NA18947.hp1 others(1): Show |
a0004a0005a0011others(1): Show | a0004c0004a0005c0003a0011c0008others(1): Show | a0004c0004t0010a0005c0003t0003a0011c0008t0001others(1): Show | a0004c0004t0010g0250a0005c0003t0003g0014a0011c0008t0001g0131others(1): Show | 4 | 264 | 0.0152 | -16 | c.421 others(33): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 12/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130600778 | AGATGAAC others(9): Show |
A | intron_variant | MODIFIER | NA20905.hp1 | a0038 | a0038c0065 | a0038c0065t0002 | a0038c0065t0002g0203 | 1 | 264 | 0.0038 | -16 | c.465 others(33): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 20/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130642243 | ATGTGTGT others(9): Show |
A | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp1 HG01884.hp2 others(7): Show |
a0001a0004a0010 | a0001c0001a0004c0026a0010c0014others(2): Show | a0001c0001t0001a0001c0001t0004a0004c0026t0001others(5): Show | a0001c0001t0001g0011a0001c0001t0004g0207a0004c0026t0001g0023others(7): Show | 10 | 264 | 0.0379 | -16 | c.515 others(33): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 29/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL8A2_chr1_36090239_36130222 | 36100887 | CTTTTTTT others(9): Show |
C | intron_variant | MODIFIER | HG02886.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0315 | 1 | 390 | 0.0026 | -16 | c.-16 others(31): Show |
COL8A2 | ENSG00000171812.13 | transcript | ENST00000397799.2 | protein_coding | 2/3 | chr1 | TogoVar | ||||||
COL9A1_chr6_70211126_70308084 | 70293631 | TCACACAC others(9): Show |
T | intron_variant | MODIFIER | HG03195.hp2 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0342 | 1 | 362 | 0.0028 | -16 | c.696 others(31): Show |
COL9A1 | ENSG00000112280.18 | transcript | ENST00000357250.11 | protein_coding | 5/37 | chr6 | TogoVar | ||||||
COL9A2_chr1_40295489_40322286 | 40321122 | ATTATATA others(9): Show |
A | upstream_gene_variant | MODIFIER | HG00423.hp2 HG00438.hp2 HG00558.hp2 others(32): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0005others(2): Show | a0001c0001t0001a0002c0002t0001a0003c0005t0001others(2): Show | a0001c0001t0001g0003a0001c0001t0001g0078a0001c0001t0001g0079others(19): Show | 35 | 438 | 0.0799 | -16 | c.-39 others(27): Show |
COL9A2 | ENSG00000049089.15 | transcript | ENST00000372748.8 | protein_coding | 3837 | chr1 | TogoVar | ||||||
COL9A3_chr20_62812050_62846159 | 62823819 | CCCTGCAG others(9): Show |
C | intron_variant | MODIFIER | NA19089.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0288 | 1 | 412 | 0.0024 | -16 | c.520 others(31): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 10/31 | chr20 | TogoVar | ||||||
COLEC10_chr8_119062247_119113455 | 119069629 | AATATATA others(9): Show |
A | intron_variant | MODIFIER | HG03209.hp2 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0077 | 1 | 388 | 0.0026 | -16 | c.148 others(33): Show |
COLEC10 | ENSG00000184374.3 | transcript | ENST00000332843.3 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
COLEC10_chr8_119062247_119113455 | 119078990 | TACACACA others(9): Show |
T | intron_variant | MODIFIER | HG02258.hp2 NA19240.hp1 |
a0001 | a0001c0001a0001c0006 | a0001c0001t0007a0001c0006t0001 | a0001c0001t0007g0063a0001c0006t0001g0070 | 2 | 388 | 0.0052 | -16 | c.149 others(35): Show |
COLEC10 | ENSG00000184374.3 | transcript | ENST00000332843.3 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
COLEC10_chr8_119062247_119113455 | 119091591 | GAGAGAGA others(9): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG02451.hp2 HG02615.hp1 others(5): Show |
a0001 | a0001c0003a0001c0007 | a0001c0003t0004a0001c0007t0003 | a0001c0003t0004g0159a0001c0003t0004g0206a0001c0003t0004g0214others(5): Show | 8 | 388 | 0.0206 | -16 | c.292 others(31): Show |
COLEC10 | ENSG00000184374.3 | transcript | ENST00000332843.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
COLEC10_chr8_119062247_119113455 | 119091595 | GAGAAAGA others(9): Show |
G | intron_variant | MODIFIER | HG01074.hp2 HG02040.hp1 HG02145.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0006 | a0001c0001t0001g0270a0001c0001t0001g0271a0001c0001t0001g0287others(8): Show | 11 | 388 | 0.0284 | -16 | c.292 others(31): Show |
COLEC10 | ENSG00000184374.3 | transcript | ENST00000332843.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
COLEC12_chr18_311737_505701 | 315232 | TCACACAC others(9): Show |
T | downstream_gene_variant | MODIFIER | NA18906.hp1 | a0004 | a0004c0006 | a0004c0006t0055 | a0004c0006t0055g0320 | 1 | 366 | 0.0027 | -16 | c.*47 others(27): Show |
COLEC12 | ENSG00000158270.12 | transcript | ENST00000400256.5 | protein_coding | 1504 | chr18 | TogoVar | ||||||
COLEC12_chr18_311737_505701 | 355047 | GCATCCAT others(9): Show |
G | intron_variant | MODIFIER | HG02083.hp2 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0290 | 1 | 366 | 0.0027 | -16 | c.181 others(33): Show |
COLEC12 | ENSG00000158270.12 | transcript | ENST00000400256.5 | protein_coding | 3/9 | chr18 | TogoVar | ||||||
COLEC12_chr18_311737_505701 | 442000 | TCTACACA others(9): Show |
T | intron_variant | MODIFIER | HG01106.hp1 HG01884.hp1 HG02630.hp1 others(2): Show |
a0001a0003a0011 | a0001c0004a0003c0002a0003c0013others(1): Show | a0001c0004t0097a0003c0002t0126a0003c0002t0204others(2): Show | a0001c0004t0097g0080a0003c0002t0126g0217a0003c0002t0204g0007others(2): Show | 5 | 366 | 0.0137 | -16 | c.58+ others(33): Show |
COLEC12 | ENSG00000158270.12 | transcript | ENST00000400256.5 | protein_coding | 2/9 | chr18 | TogoVar | ||||||
COLEC12_chr18_311737_505701 | 442114 | CCGATGTT others(9): Show |
C | intron_variant | MODIFIER | NA18997.hp2 | a0001 | a0001c0004 | a0001c0004t0157 | a0001c0004t0157g0212 | 1 | 366 | 0.0027 | -16 | c.58+ others(33): Show |
COLEC12 | ENSG00000158270.12 | transcript | ENST00000400256.5 | protein_coding | 2/9 | chr18 | TogoVar | ||||||
COLGALT1_chr19_17550649_17588157 | 17552913 | AAAATAAA others(9): Show |
A | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(129): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0009others(3): Show | a0001c0001t0008a0001c0001t0042a0001c0001t0043others(27): Show | a0001c0001t0008g0020a0001c0001t0008g0037a0001c0001t0008g0038others(96): Show | 132 | 396 | 0.3333 | -16 | c.-28 others(27): Show |
COLGALT1 | ENSG00000130309.12 | transcript | ENST00000252599.9 | protein_coding | 2735 | chr19 | TogoVar | ||||||
COLGALT2_chr1_183930834_184042728 | 184003481 | CAGTCATG others(9): Show |
C | intron_variant | MODIFIER | HG02293.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0123 | 1 | 340 | 0.0029 | -16 | c.264 others(35): Show |
COLGALT2 | ENSG00000198756.12 | transcript | ENST00000361927.9 | protein_coding | 1/11 | chr1 | TogoVar | ||||||
COLGALT2_chr1_183930834_184042728 | 184031817 | ATCCTTCC others(9): Show |
A | intron_variant | MODIFIER | HG01891.hp2 HG03486.hp2 |
a0004 | a0004c0021a0004c0022 | a0004c0021t0045a0004c0022t0044 | a0004c0021t0045g0334a0004c0022t0044g0335 | 2 | 340 | 0.0059 | -16 | c.263 others(33): Show |
COLGALT2 | ENSG00000198756.12 | transcript | ENST00000361927.9 | protein_coding | 1/11 | chr1 | TogoVar | ||||||
COLQ_chr3_15445133_15526706 | 15465232 | TTTGATTT others(9): Show |
T | intron_variant | MODIFIER | HG02027.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0296 | 1 | 382 | 0.0026 | -16 | c.814 others(33): Show |
COLQ | ENSG00000206561.14 | transcript | ENST00000383788.10 | protein_coding | 12/16 | chr3 | TogoVar | ||||||
COMMD10_chr5_116080025_116298287 | 116131405 | GTGTATGT others(9): Show |
G | intron_variant | MODIFIER | HG03195.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0071 | 1 | 350 | 0.0029 | -16 | c.400 others(33): Show |
COMMD10 | ENSG00000145781.9 | transcript | ENST00000274458.9 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
COMMD10_chr5_116080025_116298287 | 116215695 | AATATATA others(9): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp2 HG00438.hp1 others(93): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0002a0002c0003t0001 | a0001c0001t0001g0003a0001c0001t0001g0068a0001c0001t0001g0072others(90): Show | 96 | 350 | 0.2743 | -16 | c.511 others(35): Show |
COMMD10 | ENSG00000145781.9 | transcript | ENST00000274458.9 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
COMMD1_chr2_61900674_62141058 | 61913592 | AGCTCTAC others(9): Show |
A | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG01243.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0108a0001c0001t0001g0109a0001c0001t0001g0110others(3): Show | 6 | 286 | 0.0210 | -16 | c.180 others(33): Show |
COMMD1 | ENSG00000173163.11 | transcript | ENST00000311832.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
COMMD1_chr2_61900674_62141058 | 61996314 | ATGTGTGT others(9): Show |
A | intron_variant | MODIFIER | HG00423.hp1 NA18966.hp1 NA18975.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0028a0001c0001t0001g0059a0001c0001t0001g0061others(3): Show | 6 | 286 | 0.0210 | -16 | c.181 others(33): Show |
COMMD1 | ENSG00000173163.11 | transcript | ENST00000311832.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
COMMD1_chr2_61900674_62141058 | 62002491 | GAAAAAAA others(9): Show |
G | intron_variant | MODIFIER | HG02055.hp2 HG03579.hp1 HG03579.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012a0001c0001t0001g0013a0001c0001t0001g0014others(2): Show | 5 | 286 | 0.0175 | -16 | c.462 others(33): Show |
COMMD1 | ENSG00000173163.11 | transcript | ENST00000311832.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |